Metagenome / Metatranscriptome Family F099530

Basic Information
Family ID	F099530
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	81 residues
Representative Sequence	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
Number of Associated Samples	94
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	1.94 %
% of genes near scaffold ends (potentially truncated)	31.07 %
% of genes from short scaffolds (< 2000 bps)	71.84 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Archaea (72.816 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (22.330 % of family members)
Environment Ontology (ENVO)	Unclassified (37.864 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (44.660 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 76.19% β-sheet: 0.00% Coil/Unstructured: 23.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00582	Usp	2.91
PF13561	adh_short_C2	1.94
PF02844	GARS_N	0.97
PF09489	CbtB	0.97
PF04471	Mrr_cat	0.97
PF13416	SBP_bac_8	0.97
PF00361	Proton_antipo_M	0.97
PF01436	NHL	0.97
PF05368	NmrA	0.97
PF13365	Trypsin_2	0.97
PF13840	ACT_7	0.97
PF17170	DUF5128	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.79 %
Unclassified	root	N/A	26.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.82 %
Unclassified	root	N/A	26.21 %
Viruses	superkingdom	All Organisms → Viruses	0.97 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	72.82 %
Unclassified	root	N/A	26.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.21 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	2.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.21 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.21 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1.94 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.21 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	1.94 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.21 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.94 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.21 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.94 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.21 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.94 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9087081	All Organisms → cellular organisms → Archaea	1447	Open in IMG/M
2088090015\|GPICI_9109442	All Organisms → cellular organisms → Archaea	1001	Open in IMG/M
2124908021\|BSRL3_Contig_6090	All Organisms → cellular organisms → Archaea	800	Open in IMG/M
2140918002\|contig06823	Not Available	987	Open in IMG/M
2162886013\|SwBSRL2_contig_10942076	All Organisms → cellular organisms → Archaea	2251	Open in IMG/M
2162886013\|SwBSRL2_contig_1870964	All Organisms → cellular organisms → Archaea	2250	Open in IMG/M
2228664021\|ICCgaii200_c0877656	All Organisms → cellular organisms → Archaea	1395	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c001287	All Organisms → cellular organisms → Archaea	2374	Open in IMG/M
3300000550\|F24TB_11758137	All Organisms → cellular organisms → Archaea	749	Open in IMG/M
3300000559\|F14TC_100453394	All Organisms → cellular organisms → Archaea	2248	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1000797	All Organisms → cellular organisms → Archaea	3670	Open in IMG/M
3300000787\|JGI11643J11755_11805893	All Organisms → Viruses → Predicted Viral	1515	Open in IMG/M
3300002794\|JGI25510J39294_10105	All Organisms → cellular organisms → Archaea	1168	Open in IMG/M
3300002899\|JGIcombinedJ43975_10004428	All Organisms → cellular organisms → Archaea	2270	Open in IMG/M
3300002899\|JGIcombinedJ43975_10084942	All Organisms → cellular organisms → Archaea	566	Open in IMG/M
3300003987\|Ga0055471_10004464	All Organisms → cellular organisms → Archaea	2643	Open in IMG/M
3300003996\|Ga0055467_10072182	All Organisms → cellular organisms → Archaea	936	Open in IMG/M
3300005105\|Ga0066812_1005043	Not Available	799	Open in IMG/M
3300005159\|Ga0066808_1009205	All Organisms → cellular organisms → Archaea	868	Open in IMG/M
3300005161\|Ga0066807_1000406	All Organisms → cellular organisms → Archaea	2622	Open in IMG/M
3300005186\|Ga0066676_10067779	All Organisms → cellular organisms → Archaea	2083	Open in IMG/M
3300005269\|Ga0065706_1000888	All Organisms → cellular organisms → Archaea	1855	Open in IMG/M
3300005289\|Ga0065704_10030011	All Organisms → cellular organisms → Archaea	805	Open in IMG/M
3300005289\|Ga0065704_10044474	All Organisms → cellular organisms → Archaea	915	Open in IMG/M
3300005289\|Ga0065704_10060361	Not Available	563	Open in IMG/M
3300005294\|Ga0065705_10000704	All Organisms → cellular organisms → Archaea	1410	Open in IMG/M
3300005294\|Ga0065705_10080431	All Organisms → cellular organisms → Archaea	620	Open in IMG/M
3300005295\|Ga0065707_10022773	All Organisms → cellular organisms → Archaea	1120	Open in IMG/M
3300005295\|Ga0065707_10068372	All Organisms → cellular organisms → Archaea	526	Open in IMG/M
3300005446\|Ga0066686_10468871	Not Available	859	Open in IMG/M
3300006034\|Ga0066656_10908514	Not Available	564	Open in IMG/M
3300006049\|Ga0075417_10081514	Not Available	1445	Open in IMG/M
3300006194\|Ga0075427_10087916	Not Available	568	Open in IMG/M
3300006904\|Ga0075424_101232017	All Organisms → cellular organisms → Archaea	796	Open in IMG/M
3300009147\|Ga0114129_10065920	All Organisms → cellular organisms → Archaea	5052	Open in IMG/M
3300009157\|Ga0105092_10363086	All Organisms → cellular organisms → Archaea	821	Open in IMG/M
3300009793\|Ga0105077_100492	All Organisms → cellular organisms → Archaea	2392	Open in IMG/M
3300009797\|Ga0105080_1000233	Not Available	2966	Open in IMG/M
3300009801\|Ga0105056_1012871	All Organisms → cellular organisms → Archaea	960	Open in IMG/M
3300009803\|Ga0105065_1000162	All Organisms → cellular organisms → Archaea	5672	Open in IMG/M
3300009805\|Ga0105079_1025578	Not Available	593	Open in IMG/M
3300009810\|Ga0105088_1000973	All Organisms → cellular organisms → Archaea	3246	Open in IMG/M
3300009816\|Ga0105076_1006163	All Organisms → cellular organisms → Archaea	1955	Open in IMG/M
3300009818\|Ga0105072_1035096	All Organisms → cellular organisms → Archaea	936	Open in IMG/M
3300009819\|Ga0105087_1017564	All Organisms → cellular organisms → Archaea	1007	Open in IMG/M
3300009821\|Ga0105064_1009843	All Organisms → cellular organisms → Archaea	1692	Open in IMG/M
3300009823\|Ga0105078_1001710	All Organisms → cellular organisms → Archaea	1897	Open in IMG/M
3300010336\|Ga0134071_10174309	All Organisms → cellular organisms → Archaea	1054	Open in IMG/M
3300012204\|Ga0137374_10023763	All Organisms → cellular organisms → Archaea	6872	Open in IMG/M
3300012358\|Ga0137368_10187740	All Organisms → cellular organisms → Archaea	1483	Open in IMG/M
3300012941\|Ga0162652_100014157	All Organisms → cellular organisms → Archaea	1036	Open in IMG/M
3300012958\|Ga0164299_10204399	All Organisms → cellular organisms → Archaea	1144	Open in IMG/M
3300018000\|Ga0184604_10005242	All Organisms → cellular organisms → Archaea	2390	Open in IMG/M
3300018027\|Ga0184605_10343792	All Organisms → cellular organisms → Archaea	674	Open in IMG/M
3300018027\|Ga0184605_10499042	Not Available	530	Open in IMG/M
3300018028\|Ga0184608_10132159	Not Available	1066	Open in IMG/M
3300018031\|Ga0184634_10033422	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2049	Open in IMG/M
3300018052\|Ga0184638_1000577	All Organisms → cellular organisms → Archaea	10403	Open in IMG/M
3300018054\|Ga0184621_10033615	All Organisms → cellular organisms → Archaea	1651	Open in IMG/M
3300018056\|Ga0184623_10000115	All Organisms → cellular organisms → Archaea	31575	Open in IMG/M
3300018067\|Ga0184611_1000484	All Organisms → cellular organisms → Archaea	7337	Open in IMG/M
3300018072\|Ga0184635_10253989	Not Available	695	Open in IMG/M
3300018074\|Ga0184640_10135181	Not Available	1092	Open in IMG/M
3300018077\|Ga0184633_10065282	All Organisms → cellular organisms → Archaea	1861	Open in IMG/M
3300018084\|Ga0184629_10088834	Not Available	1493	Open in IMG/M
3300018465\|Ga0190269_10196444	All Organisms → cellular organisms → Archaea	1089	Open in IMG/M
3300018465\|Ga0190269_11402543	Not Available	567	Open in IMG/M
3300018466\|Ga0190268_10137803	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1220	Open in IMG/M
3300018481\|Ga0190271_11822263	Not Available	720	Open in IMG/M
3300019279\|Ga0184642_1029150	Not Available	573	Open in IMG/M
3300019868\|Ga0193720_1004002	All Organisms → cellular organisms → Archaea	2000	Open in IMG/M
3300019875\|Ga0193701_1000262	All Organisms → cellular organisms → Archaea	9393	Open in IMG/M
3300019879\|Ga0193723_1138643	Not Available	662	Open in IMG/M
3300020018\|Ga0193721_1052261	All Organisms → cellular organisms → Archaea	1073	Open in IMG/M
3300020020\|Ga0193738_1009558	All Organisms → cellular organisms → Archaea	3190	Open in IMG/M
3300021073\|Ga0210378_10408061	All Organisms → cellular organisms → Archaea	503	Open in IMG/M
3300021412\|Ga0193736_1008335	Not Available	1273	Open in IMG/M
3300021972\|Ga0193737_1059341	Not Available	542	Open in IMG/M
3300022694\|Ga0222623_10301215	Not Available	615	Open in IMG/M
3300025567\|Ga0210076_1018608	All Organisms → cellular organisms → Archaea	1480	Open in IMG/M
3300025791\|Ga0210115_1087259	Not Available	639	Open in IMG/M
3300026324\|Ga0209470_1056260	All Organisms → cellular organisms → Archaea	1877	Open in IMG/M
3300026888\|Ga0209900_1005125	All Organisms → cellular organisms → Archaea	950	Open in IMG/M
3300026894\|Ga0207980_1001838	All Organisms → cellular organisms → Archaea	1322	Open in IMG/M
3300026912\|Ga0208520_1000454	All Organisms → cellular organisms → Archaea	1207	Open in IMG/M
3300027006\|Ga0209896_1000162	All Organisms → cellular organisms → Archaea	5382	Open in IMG/M
3300027013\|Ga0209884_1000025	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	22843	Open in IMG/M
3300027041\|Ga0209876_1010984	All Organisms → cellular organisms → Archaea	671	Open in IMG/M
3300027056\|Ga0209879_1000633	All Organisms → cellular organisms → Archaea	4328	Open in IMG/M
3300027187\|Ga0209869_1011791	All Organisms → cellular organisms → Archaea	958	Open in IMG/M
3300027277\|Ga0209846_1050202	Not Available	640	Open in IMG/M
3300027324\|Ga0209845_1001591	All Organisms → cellular organisms → Archaea	3957	Open in IMG/M
3300027379\|Ga0209842_1047769	All Organisms → cellular organisms → Archaea	779	Open in IMG/M
3300027511\|Ga0209843_1051097	Not Available	730	Open in IMG/M
3300027722\|Ga0209819_10295375	All Organisms → cellular organisms → Archaea	558	Open in IMG/M
3300027873\|Ga0209814_10001456	All Organisms → cellular organisms → Archaea	8369	Open in IMG/M
3300027876\|Ga0209974_10415940	Not Available	530	Open in IMG/M
3300027949\|Ga0209860_1019195	All Organisms → cellular organisms → Archaea	914	Open in IMG/M
3300027952\|Ga0209889_1005257	All Organisms → cellular organisms → Archaea	3479	Open in IMG/M
3300028722\|Ga0307319_10269793	Not Available	561	Open in IMG/M
3300028744\|Ga0307318_10303648	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
3300031740\|Ga0307468_101171538	All Organisms → cellular organisms → Archaea	690	Open in IMG/M
3300031858\|Ga0310892_10665528	Not Available	711	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.29%
Host-Associated	Host-Associated	9.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.93%
Aquatic	Environmental → Aquatic	21.36%
Plants	Host-Associated → Plants	9.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.96%
Sediment	Environmental → Aquatic → Sediment	13.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Marine	Environmental → Aquatic → Marine	3.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.88%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.75%
Sand	Environmental → Terrestrial → Soil → Sand	22.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.88%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.07%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	22.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	22.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	2.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Rhizosphere And Bulk Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Rhizosphere And Bulk Soil	0.97%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2124908021	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
2140918002	Rhizosphere and bulk soil microbial communities from the Great Lakes - Sample MSB1	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002794	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-C	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005269	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009793	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40	Environmental	Open in IMG/M
3300009797	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026888	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20 (SPAdes)	Environmental	Open in IMG/M
3300026894	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA (SPAdes)	Environmental	Open in IMG/M
3300026912	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027041	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027187	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02706350	2088090015	Soil	SLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
GPICI_02916150	2088090015	Soil	MHDNNEERHEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEME
BSRL3_00368890	2124908021	Switchgrass Rhizosphere	MNDNNEERPEDRNRKMSLEEDKSILEERIDFFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
MSB1_00109120	2140918002	Rhizosphere And Bulk Soil	MNDNNEERREDRNRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVLAKK
SwBSRL2_0899.00004020	2162886013	Switchgrass Rhizosphere	MSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
SwBSRL2_0304.00002260	2162886013	Switchgrass Rhizosphere	MNDNNEERREDRNRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEGLAKK
ICCgaii200_08776563	2228664021	Soil	MHDNNEERHEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
ARSoilOldRDRAFT_0012872	3300000044	Arabidopsis Rhizosphere	MNDNNEKRREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRG*
F24TB_117581371	3300000550	Soil	MHDNNEERHEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
F14TC_1004533941	3300000559	Soil	EDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
KanNP_Total_noBrdU_T14TCDRAFT_10007976	3300000596	Soil	MHDNNEERREDRNRKMSLEEDKSILEERIDFFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
JGI11643J11755_118058933	3300000787	Soil	MHDNNEERHEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMEVFSQEMIKXGRGITK*
JGI25510J39294_101051	3300002794	Soil	MHDNNEERHEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
JGIcombinedJ43975_100044282	3300002899	Soil	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
JGIcombinedJ43975_100849422	3300002899	Soil	MNDNNEERREDRNRKMSLEEDKSILEERIDFFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0055471_100044644	3300003987	Natural And Restored Wetlands	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIVKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0055467_100721821	3300003996	Natural And Restored Wetlands	MSDNNEERREDRNRKMNLEEDKSILEERIDLFEKSLANIGIGLKLTREEIIHIVKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0066812_10050431	3300005105	Soil	KRREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0066808_10092051	3300005159	Soil	NDNNEERREDRNRKVSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0066807_10004063	3300005161	Soil	MNDNNEKRREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0066676_100677793	3300005186	Soil	MNDNNEERREDRNRKMSLEEDKSILEERMDLFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0065706_10008882	3300005269	Switchgrass Rhizosphere	MNDNNEERXEDRNRKMSLEEDKSILEERIDXFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMESV*
Ga0065704_100300113	3300005289	Switchgrass Rhizosphere	MNDNNEERXEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0065704_100444743	3300005289	Switchgrass Rhizosphere	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVINIIKSNPAEFXKLLMEMEXFSQEMIKRGRGITK*
Ga0065704_100603611	3300005289	Switchgrass Rhizosphere	MNDNNEERREDRXRNRKMSLEEDKSILEERIDFFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0065705_100007041	3300005294	Switchgrass Rhizosphere	MNDNNEERREDRNRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0065705_100804312	3300005294	Switchgrass Rhizosphere	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0065707_100227731	3300005295	Switchgrass Rhizosphere	MNDNNEERREDRNRKMSLEEDKSILEERIDFFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKXGRGITK*
Ga0065707_100683721	3300005295	Switchgrass Rhizosphere	MITMKKDXEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0066686_104688712	3300005446	Soil	EMSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0066656_109085141	3300006034	Soil	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0075417_100815143	3300006049	Populus Rhizosphere	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0075427_100879162	3300006194	Populus Rhizosphere	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0075424_1012320172	3300006904	Populus Rhizosphere	MNDNNEKRREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0114129_100659205	3300009147	Populus Rhizosphere	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0105092_103630861	3300009157	Freshwater Sediment	DNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105077_1004925	3300009793	Groundwater Sand	MSDNNEGRREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105080_10002333	3300009797	Groundwater Sand	MSDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0105056_10128711	3300009801	Groundwater Sand	NRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105065_10001625	3300009803	Groundwater Sand	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105079_10255782	3300009805	Groundwater Sand	MNDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0105088_10009733	3300009810	Groundwater Sand	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIRSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105076_10061635	3300009816	Groundwater Sand	KMNLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105072_10350962	3300009818	Groundwater Sand	MSDNNEGRREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105087_10175641	3300009819	Groundwater Sand	REDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR*
Ga0105064_10098431	3300009821	Groundwater Sand	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0105078_10017101	3300009823	Groundwater Sand	EMSDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0134071_101743091	3300010336	Grasslands Soil	MNDNNEERREDRNRKMSLEVDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0137374_100237638	3300012204	Vadose Zone Soil	MSDNKEERREDRNRKMSLEDDKSILEERIDLFEKCLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0137368_101877403	3300012358	Vadose Zone Soil	MSDNKEERREDRNRKMSLEDDKSILEERIDLFEKCLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGR
Ga0162652_1000141571	3300012941	Soil	MNDNNEERREDSNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK*
Ga0164299_102043991	3300012958	Soil	NRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK*
Ga0184604_100052425	3300018000	Groundwater Sediment	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0184605_103437921	3300018027	Groundwater Sediment	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEME
Ga0184605_104990421	3300018027	Groundwater Sediment	MSDNKEERREDRNRKMSLEDDKSILEERIDLFEKCLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEM
Ga0184608_101321591	3300018028	Groundwater Sediment	MSDNKEERREDRNRKMSLEVDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0184634_100334224	3300018031	Groundwater Sediment	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIVKSDPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0184638_10005771	3300018052	Groundwater Sediment	NRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSSPAEFLKILMEMEVFSQEMIKRGRGITK
Ga0184621_100336154	3300018054	Groundwater Sediment	MNDNNEERREDRNRKISLEDDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0184623_100001154	3300018056	Groundwater Sediment	MSDNNEERREDRRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIINIIKSNPAKFLKLLMEMERFSQEMIERGRGVTK
Ga0184611_10004842	3300018067	Groundwater Sediment	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEMFSQEMIKRGRGITK
Ga0184635_102539891	3300018072	Groundwater Sediment	MSDNKEERREDRNRKMSLEVDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSSPAEFLKILMEMEVFSQEMIKRGRGITK
Ga0184640_101351811	3300018074	Groundwater Sediment	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSSPAEFLKILMEMEVFSQEMIKRGRGITK
Ga0184633_100652824	3300018077	Groundwater Sediment	SDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSSPAEFLKILMEMEVFSQEMIKRGRGITK
Ga0184629_100888342	3300018084	Groundwater Sediment	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREDIIHIVKSNPAEFLKLLMEMERFSQEMIKRGRGSTNRDGK
Ga0190269_101964442	3300018465	Soil	MNDNNEERSEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0190269_114025431	3300018465	Soil	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0190268_101378032	3300018466	Soil	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTRKEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0190271_118222631	3300018481	Soil	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIKSNPAEFLKVLMEMERFSQEMIKRGRGITR
Ga0184642_10291501	3300019279	Groundwater Sediment	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0193720_10040023	3300019868	Soil	MSDNKEERREDRNRKMSLEDDKSILEERIDLFEKCLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0193701_10002622	3300019875	Soil	MSDNKEERREDRNRKMSLEDDKSILEERIDLFEKCLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0193723_11386431	3300019879	Soil	MSDNKEERREDRNRKMSLEDDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0193721_10522611	3300020018	Soil	RKMSLEDDKSILEERIDLFEKCLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0193738_10095583	3300020020	Soil	MSDNNEERREDRNRKVSLEEDKSILKERIDLFEKSLANTGIGLKLTRKEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0210378_104080611	3300021073	Groundwater Sediment	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSSPAEFLKILMEMEVFSQEMIKRGRGITK
Ga0193736_10083352	3300021412	Soil	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIRSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0193737_10593411	3300021972	Soil	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIVKSNPAEFLKLLMEMEVFSQEM
Ga0222623_103012151	3300022694	Groundwater Sediment	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIVKSDPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0210076_10186081	3300025567	Natural And Restored Wetlands	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIVKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0210115_10872591	3300025791	Natural And Restored Wetlands	RREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIVKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0209470_10562602	3300026324	Soil	MNDNNEERREDRNRKMSLEEDKSILEERMDLFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0209900_10051251	3300026888	Groundwater Sand	EMSDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0207980_10018381	3300026894	Soil	MNDNNEKRREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0208520_10004543	3300026912	Soil	MNDNNEKRREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRV
Ga0209896_10001626	3300027006	Groundwater Sand	MSDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITR
Ga0209884_10000254	3300027013	Groundwater Sand	MSDNNEGRREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0209876_10109842	3300027041	Groundwater Sand	NRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0209879_10006336	3300027056	Groundwater Sand	NRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITR
Ga0209869_10117912	3300027187	Groundwater Sand	MSDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVF
Ga0209846_10502021	3300027277	Groundwater Sand	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0209845_10015913	3300027324	Groundwater Sand	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLRREEVIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0209842_10477691	3300027379	Groundwater Sand	EMSDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0209843_10510971	3300027511	Groundwater Sand	MSDNNEERREDRNRKMNLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRG
Ga0209819_102953751	3300027722	Freshwater Sediment	RKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEVTHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0209814_100014568	3300027873	Populus Rhizosphere	MNDNNEERREDRNRKMSLEEDKSILEERIDFFEKSLANTGIGLKLTREEVINIIKSNPAEFLKLLMEMERFSQEMIKRGRGITK
Ga0209974_104159401	3300027876	Arabidopsis Thaliana Rhizosphere	EMHDNNEERHEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0209860_10191952	3300027949	Groundwater Sand	MSDNNEERREDKNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLRREEVIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0209889_10052576	3300027952	Groundwater Sand	MSDNNEERREDRNRKMNLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMERFSQEMIKRGRGITR
Ga0307319_102697931	3300028722	Soil	DRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEMFSQEMIKRGRGITK
Ga0307318_103036481	3300028744	Soil	MNDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEMFSQE
Ga0307468_1011715381	3300031740	Hardwood Forest Soil	MNDNNEERPEDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK
Ga0310892_106655281	3300031858	Soil	MSDNNEERREDRNRKMSLEEDKSILEERIDLFEKSLANTGIGLKLTREEIIHIIKSNPAEFLKLLMEMEVFSQEMIKRGRGITK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099530

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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