Metagenome Family F098566

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098566
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	70 residues
Representative Sequence	MRAAPFDLGLGAEDERAIREARSGRFVLDREAALKLITDASPLVDAAVRRRPVLSGAPFTLPGHEELPGS
Number of Associated Samples	80
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.14 %
% of genes near scaffold ends (potentially truncated)	21.36 %
% of genes from short scaffolds (< 2000 bps)	79.61 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.398 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (17.476 % of family members)
Environment Ontology (ENVO)	Unclassified (29.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (36.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.65% β-sheet: 0.00% Coil/Unstructured: 67.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF08843	AbiEii	33.01
PF01208	URO-D	6.80
PF01451	LMWPc	3.88
PF01909	NTP_transf_2	2.91
PF14256	YwiC	1.94
PF01433	Peptidase_M1	1.94
PF16983	MFS_MOT1	0.97
PF04397	LytTR	0.97
PF01850	PIN	0.97
PF01408	GFO_IDH_MocA	0.97
PF01758	SBF	0.97
PF06769	YoeB_toxin	0.97
PF01022	HTH_5	0.97
PF12840	HTH_20	0.97
PF08240	ADH_N	0.97
PF00884	Sulfatase	0.97
PF13946	DUF4214	0.97
PF06283	ThuA	0.97
PF03958	Secretin_N	0.97
PF14559	TPR_19	0.97
PF02371	Transposase_20	0.97
PF00676	E1_dh	0.97
PF04434	SWIM	0.97
PF00486	Trans_reg_C	0.97
PF01738	DLH	0.97
PF00400	WD40	0.97
PF02837	Glyco_hydro_2_N	0.97
PF03551	PadR	0.97
PF13432	TPR_16	0.97
PF02604	PhdYeFM_antitox	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	33.01
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	6.80
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	1.94
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.97
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.97
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.97
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.97
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.97
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.97
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.97
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.97
COG4115	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	Defense mechanisms [V]	0.97
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.97
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.97
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.97
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.97
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.97 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.94 %
candidate division Zixibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria	0.97 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	0.97 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.97 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.80 %
Acidobacteria bacterium RBG_16_70_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	2.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.94 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.94 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.94 %
Acidobacteria bacterium 13_1_40CM_3_65_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.97 %
unclassified candidate division Zixibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria	0.97 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.97 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.97 %
unclassified Candidatus Latescibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria	0.97 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.97 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.80 %
Acidobacteria bacterium RBG_16_70_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	2.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.97 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.97 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.97 %
Thermoanaerobaculaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae	0.97 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.97 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.97 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.97 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.97 %
Acidobacteria bacterium 13_1_40CM_3_65_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	0.97 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.80 %
Acidobacteria bacterium RBG_16_70_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	2.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Thermoanaerobaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum	0.97 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.97 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.97 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.97 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.97 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.97 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.97 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.97 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.97 %
Acidobacteria bacterium 13_1_40CM_3_65_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	0.97 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.80 %
Acidobacteria bacterium RBG_16_70_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	2.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	0.97 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.97 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.97 %
unclassified Devosia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → unclassified Devosia	0.97 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.97 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.97 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.97 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.97 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.97 %
Acidobacteria bacterium 13_1_40CM_3_65_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	0.97 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.80 %
Acidobacteria bacterium RBG_16_70_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	2.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Devosia sp. JXJ CY 41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → unclassified Devosia → Devosia sp. JXJ CY 41	0.97 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.97 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	0.97 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.97 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.97 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.97 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.97 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.97 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.97 %
Acidobacteria bacterium 13_1_40CM_3_65_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	0.97 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.80 %
Acidobacteria bacterium RBG_16_70_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	2.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.94 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.97 %
Devosia sp. JXJ CY 41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → unclassified Devosia → Devosia sp. JXJ CY 41	0.97 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	0.97 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.97 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.97 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.97 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.97 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.97 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.97 %
Acidobacteria bacterium 13_1_40CM_3_65_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	0.97 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000231\|TB_LI09_4DRAFT_10004621	All Organisms → cellular organisms → Bacteria	6677	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101532321	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300000789\|JGI1027J11758_12254766	Not Available	605	Open in IMG/M
3300001213\|JGIcombinedJ13530_103017522	Not Available	676	Open in IMG/M
3300001213\|JGIcombinedJ13530_103275296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1299	Open in IMG/M
3300002121\|C687J26615_10072164	Not Available	861	Open in IMG/M
3300003994\|Ga0055435_10158149	Not Available	635	Open in IMG/M
3300004024\|Ga0055436_10044883	Not Available	1182	Open in IMG/M
3300004061\|Ga0055487_10004038	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300004067\|Ga0055485_10012394	Not Available	1505	Open in IMG/M
3300004778\|Ga0062383_10190970	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300004778\|Ga0062383_10250500	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	835	Open in IMG/M
3300005208\|Ga0069003_10083898	Not Available	591	Open in IMG/M
3300005332\|Ga0066388_108167861	Not Available	523	Open in IMG/M
3300005536\|Ga0070697_101760052	Not Available	554	Open in IMG/M
3300005833\|Ga0074472_11303918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → unclassified Devosia → Devosia sp. JXJ CY 41	519	Open in IMG/M
3300005836\|Ga0074470_10876965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8773	Open in IMG/M
3300009053\|Ga0105095_10429169	Not Available	730	Open in IMG/M
3300009075\|Ga0105090_10812263	Not Available	568	Open in IMG/M
3300009078\|Ga0105106_10844545	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009087\|Ga0105107_10105540	Not Available	1986	Open in IMG/M
3300009091\|Ga0102851_11106301	Not Available	867	Open in IMG/M
3300009091\|Ga0102851_11210972	Not Available	831	Open in IMG/M
3300009091\|Ga0102851_11236569	Not Available	823	Open in IMG/M
3300009091\|Ga0102851_12358792	Not Available	607	Open in IMG/M
3300009100\|Ga0075418_11389035	Not Available	762	Open in IMG/M
3300009111\|Ga0115026_10013460	All Organisms → cellular organisms → Bacteria	3731	Open in IMG/M
3300009111\|Ga0115026_11685130	Not Available	534	Open in IMG/M
3300009131\|Ga0115027_10040182	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300009165\|Ga0105102_10098080	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300009166\|Ga0105100_10560661	Not Available	698	Open in IMG/M
3300009873\|Ga0131077_10045961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6255	Open in IMG/M
3300009873\|Ga0131077_10167510	All Organisms → cellular organisms → Bacteria	3300	Open in IMG/M
3300010391\|Ga0136847_12558926	Not Available	841	Open in IMG/M
3300010996\|Ga0139308_131765	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300012152\|Ga0137347_1044324	Not Available	736	Open in IMG/M
3300012157\|Ga0137353_1062275	Not Available	688	Open in IMG/M
3300014871\|Ga0180095_1006254	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300014884\|Ga0180104_1139518	Not Available	710	Open in IMG/M
3300014884\|Ga0180104_1166494	Not Available	656	Open in IMG/M
3300015255\|Ga0180077_1011762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	1473	Open in IMG/M
3300017944\|Ga0187786_10381329	Not Available	606	Open in IMG/M
3300018055\|Ga0184616_10120332	Not Available	951	Open in IMG/M
3300018059\|Ga0184615_10186254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1170	Open in IMG/M
3300018059\|Ga0184615_10456719	Not Available	693	Open in IMG/M
3300018070\|Ga0184631_10265995	Not Available	710	Open in IMG/M
3300018074\|Ga0184640_10241516	Not Available	819	Open in IMG/M
3300021090\|Ga0210377_10036028	All Organisms → cellular organisms → Bacteria	3503	Open in IMG/M
3300021090\|Ga0210377_10596840	Not Available	623	Open in IMG/M
3300025160\|Ga0209109_10065783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1902	Open in IMG/M
3300025165\|Ga0209108_10052566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2256	Open in IMG/M
3300025324\|Ga0209640_10065896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3134	Open in IMG/M
3300025551\|Ga0210131_1007163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1445	Open in IMG/M
3300025946\|Ga0210126_110830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_3_65_5	791	Open in IMG/M
3300025951\|Ga0210066_1015212	Not Available	1173	Open in IMG/M
3300025975\|Ga0210091_1034255	Not Available	532	Open in IMG/M
3300027840\|Ga0209683_10113972	Not Available	1226	Open in IMG/M
3300027843\|Ga0209798_10117766	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300027871\|Ga0209397_10196694	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300027877\|Ga0209293_10674795	Not Available	547	Open in IMG/M
3300027885\|Ga0209450_10083756	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300027897\|Ga0209254_10031430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	4760	Open in IMG/M
3300027900\|Ga0209253_10063791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	3044	Open in IMG/M
3300027900\|Ga0209253_10318520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300030606\|Ga0299906_10071020	All Organisms → cellular organisms → Bacteria → Acidobacteria	2773	Open in IMG/M
3300030619\|Ga0268386_10179188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1599	Open in IMG/M
3300031576\|Ga0247727_10152640	Not Available	2229	Open in IMG/M
3300031834\|Ga0315290_10695496	Not Available	876	Open in IMG/M
3300031949\|Ga0214473_10481368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1389	Open in IMG/M
3300031949\|Ga0214473_10957586	Not Available	908	Open in IMG/M
3300031949\|Ga0214473_11586790	Not Available	656	Open in IMG/M
3300031997\|Ga0315278_10347201	All Organisms → cellular organisms → Bacteria → Proteobacteria	1534	Open in IMG/M
3300032143\|Ga0315292_10141139	All Organisms → cellular organisms → Bacteria	1928	Open in IMG/M
3300032164\|Ga0315283_10410760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	1472	Open in IMG/M
3300032177\|Ga0315276_10634601	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300032177\|Ga0315276_11792230	Not Available	631	Open in IMG/M
3300032256\|Ga0315271_10254438	Not Available	1429	Open in IMG/M
3300032275\|Ga0315270_10120945	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300032342\|Ga0315286_11108512	Not Available	780	Open in IMG/M
3300032397\|Ga0315287_10456821	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300032397\|Ga0315287_10787953	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	1118	Open in IMG/M
3300032401\|Ga0315275_12224044	Not Available	573	Open in IMG/M
3300032516\|Ga0315273_10186880	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300032829\|Ga0335070_10513437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1135	Open in IMG/M
3300033004\|Ga0335084_10154364	Not Available	2388	Open in IMG/M
3300033004\|Ga0335084_10194303	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300033004\|Ga0335084_10452081	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300033004\|Ga0335084_11068041	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300033408\|Ga0316605_10498151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300033408\|Ga0316605_11092798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	768	Open in IMG/M
3300033408\|Ga0316605_11468374	Not Available	662	Open in IMG/M
3300033414\|Ga0316619_11591951	Not Available	588	Open in IMG/M
3300033416\|Ga0316622_100167165	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300033416\|Ga0316622_100309028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	1742	Open in IMG/M
3300033416\|Ga0316622_100750664	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	1131	Open in IMG/M
3300033433\|Ga0326726_10026463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5046	Open in IMG/M
3300033433\|Ga0326726_12019621	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300033480\|Ga0316620_10765121	Not Available	924	Open in IMG/M
3300033482\|Ga0316627_100323168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RBG_16_70_10	1281	Open in IMG/M
3300033485\|Ga0316626_10396076	Not Available	1152	Open in IMG/M
3300033486\|Ga0316624_10046016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2748	Open in IMG/M
3300033513\|Ga0316628_103636740	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300033557\|Ga0316617_102355018	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Engineered	Engineered	1.94%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	63.11%
Terrestrial	Environmental → Terrestrial	33.98%
Wastewater	Engineered → Wastewater	1.94%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	39.81%
Soil	Environmental → Terrestrial → Soil	31.07%
Sediment	Environmental → Aquatic → Sediment	12.62%
Marine	Environmental → Aquatic → Marine	10.68%
Peat	Environmental → Terrestrial → Peat	1.94%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.94%
Cave	Environmental → Terrestrial → Cave	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.45%
Lake	Environmental → Aquatic → Freshwater → Lake	13.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	12.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	10.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.88%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.94%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.45%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	12.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.62%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	8.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.77%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.91%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.94%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.62%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	8.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.83%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.88%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.94%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.94%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.94%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000231	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005208	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010996	ELM11109_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300012152	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT590_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025946	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025951	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025975	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_LI09_4DRAFT_100046215	3300000231	Groundwater	MKGPRFDLGLTAEDERAMRAGRRERPVLDLEGALRLMAEASALVEAAVRRRPLFSGVPFTLPGHRDPSGA*
INPhiseqgaiiFebDRAFT_1015323213	3300000364	Soil	MTPDLFDLGLTDEDRRALXDARRRRLXVDREVALRLIAEWGQLVDAAVRRRPLFRGVPFTLPGHQEDPDSSG*
JGI1027J11758_122547661	3300000789	Soil	MTPDLFDLGLTDEDRRALRDARRRRLEVDREVALRLIAEWGPLVDAAVRRRPLFRGAPFTLPGHQEDPDSSG*
JGIcombinedJ13530_1030175222	3300001213	Wetland	MRAGLFDLGLSEEDELAMREARLRRAVVDPESALRLISGAGALVDAAVRRRPLLSGAPFTLPGHEEAPGGSAGQ*
JGIcombinedJ13530_1032752962	3300001213	Wetland	MRAALFDLGLSEEDELAMREARSRRVVVDREAALRLISDAGALVDAAVRRRPLFSGVPFTLPGHEEAPGRQNR*
C687J26615_100721642	3300002121	Soil	MSAGFFDLGLSAEDELAMREARIRRLVVDPEAALRLIADAGPLVDAAVRRRPLFSGAPFTLLGHEE
Ga0055435_101581491	3300003994	Natural And Restored Wetlands	MRPLPFDLGLREEDERAIQQARRRQSFVLDREAAFRLIADASALVDGAVRRRPLLLGAAFTLPGLEESSDV*
Ga0055436_100448831	3300004024	Natural And Restored Wetlands	MRPLPFDLGLREEDERAIQQARRRQSFVLDREAAFRLIADASALVDGAVRRRPLLLGAAFTLPGLEESS
Ga0055487_100040382	3300004061	Natural And Restored Wetlands	MSPLPFDLGLSEEDERALRQARRERHVIDGEAALRLIKDASQLVDAAVRRRPLFSGAPLTLPGDQGPFRSGGSEG*
Ga0055485_100123942	3300004067	Natural And Restored Wetlands	MSLLPFDLGLSEEDERALRQARRERHVIDGEAALRLIKDASQLVDAAVRRRPLFSGAPFTLPGDQGPFRSGGSEG*
Ga0062383_101909703	3300004778	Wetland Sediment	MRAAPFDLGLGAEDERAIREARCGRFVLDREAALKLIRDASPLVDAAVRRRPVLSGAPFTLPGHEELPGS*
Ga0062383_102505001	3300004778	Wetland Sediment	MRAAAFDLGLDAEDERAIREARSGPFVLDREAALELIRDASPLVDAAVRRRPVLSGAPFTLPGHEELPGS*
Ga0069003_100838981	3300005208	Natural And Restored Wetlands	MRAALFDLGLGAEDERAIREARRGRFVLDREAALKLMTDASPLVDAAVRRRPVLSGAPFTLPDHRERSG
Ga0066388_1081678612	3300005332	Tropical Forest Soil	MTGSFDLGLTADDEAALREARRRPLVVDRDAVLRLLAEASRRVDAAVRRRPVFLGAPFTLPGHVD*
Ga0070697_1017600521	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSVGFFDLGLSEEDELAMRVARLRRLVVDREAALRLIADAGALVDAAVRRRPLLSGAPFTLPGHEEDHR*
Ga0074472_113039181	3300005833	Sediment (Intertidal)	LGLCEEDELAMREARLRRFVVDRETALRLISDAGALVDAAVRRRPLFSGAPFTLPGHEEAPG*
Ga0074470_108769655	3300005836	Sediment (Intertidal)	MSAPFFDLGLSEEDEAAMKEARLLRFVVDREAALRLIADAGALVDAAVRRRPLPSGASFTLPGHQEDPGE*
Ga0105095_104291691	3300009053	Freshwater Sediment	MRAVPFDLGLGAEDERAIREARSGCLEFDREAALELIRDASPLVDGAVRRRPVLSGPPFT
Ga0105090_108122631	3300009075	Freshwater Sediment	MRAAAFDLGLGAEDERAIREARRGRFVLDREAALKLINDASPLVDAAVRRRPVLSGAPFTLPGHEEVPGS*
Ga0105106_108445452	3300009078	Freshwater Sediment	MTVHPFDLGLTEQDERGLREARSRRLEVDRRVALRLIADWGPLVDAAVRRRPLFRGAPFTLPGHVEDLGS*
Ga0105107_101055402	3300009087	Freshwater Sediment	MTVHPFDLGLTEQDERGLREARSRRLEVDRRVALRLIADWGPLVDAAVRRRPLFPGAPFTLPGHVEDLGS*
Ga0102851_111063012	3300009091	Freshwater Wetlands	MRAAPFDLGLGAEDECAIREARRGRFVLDREAALKLMTDASPLVDAAVRRRPVPKGPPFTLPGHEELPGS*
Ga0102851_112109722	3300009091	Freshwater Wetlands	MTTNRFDLGLTEEDQRGLHEARSRRCEIDRQVALRLIAEWGPLVDAAVRRRPLFRGAPFTLPGHE
Ga0102851_112365691	3300009091	Freshwater Wetlands	MRAAPFDLGLGAEDERAIREARCRDFVLDREAALKLITDASPLVDAAVRRRPVLSGPPFTLPGHEELPGS*
Ga0102851_123587922	3300009091	Freshwater Wetlands	MKGQRFDLGLTAEDERAMRDGRRERPVLDPEGALRLIAGASALVDAAVRRRPLLSGVPFTLPGHREPSDA*
Ga0075418_113890352	3300009100	Populus Rhizosphere	MSVESFDLGLTDEDRRAMREARFAPFAVDREAALRLILDAGPLVDAAVRRRPLFSGAPFVLPGHEEEPGP*
Ga0115026_100134604	3300009111	Wetland	MKGQRFDLGLTAEDERAMRDGRRERPVLDPEGALRLIAGASALVDAAVRRRPLLSGVPFTLPGHREPSDG*
Ga0115026_116851301	3300009111	Wetland	AGSPMKAAPFDLGLGAEDERAIREARRGRFVLDREAALELMTDASPLVDAAVRCRPVPTGPPFTLPGHEELPGS*
Ga0115027_100401824	3300009131	Wetland	MRAAPFDLGLSAEDERAIREARCGRFVLDREAALKLISDASPLVDAAVRRRPVPKGPPFTLPGHEELPGS*
Ga0105102_100980801	3300009165	Freshwater Sediment	DERAIREARCGHFVLDREAALELITDASPLVDAAVRRRPLLSGPPFTLPGHKELPGS*
Ga0105100_105606611	3300009166	Freshwater Sediment	LGAEDERAIREARSGCLEFDREAARELIRDASPLVDGAVRRRPVLSGPPFTLPGHEELPGS*
Ga0131077_100459615	3300009873	Wastewater	VSPAEFDLGLCEEDERALRAARRASVVVDRAAALRLMADASSIVDAAVRRRPLTTGAPFTLPGHEPASGAGERT*
Ga0131077_101675104	3300009873	Wastewater	MRSPAFDLGLCEEDVRAMRAARQAPFGVDGAAALRLMADASSIVDAAVRRRPLTTAAPFTLPGHEPASDAGERKQAGPVRGPQ*
Ga0136847_125589262	3300010391	Freshwater Sediment	MRGGFFDLGLCEEDELAMREARLRRVVVDREAALRLISDAGALVDAAVRRRPLFSGAPFTLPGHEEAPG*
Ga0139308_1317652	3300010996	Sediment	MTRNHFDLGLTEEDRRALREARLRPFEVDREVALRLIAEWGPLVDAAVRRRPLLRGAPFTLPGHEEGTGS*
Ga0137347_10443241	3300012152	Soil	MRAARFDLGLGAEDERAIREARCGRFVLDREAALKLITDASPLVDAAVRHRPVLAGVPFTLPGHEELPGW*
Ga0137353_10622752	3300012157	Soil	MRAAPFDLGLGAEDERAIREARFGRFVLDREAALKLITDASPLVDAAVRRRPVLSGAPFTLPGHKELPGS*
Ga0180095_10062543	3300014871	Soil	DLGLGAEDERAIREARFGRFVLDREAALKAITDASPLADAAVRRRPVLSGAPFTLAGHKELPGSGRASSRRR*
Ga0180104_11395182	3300014884	Soil	MSAAFFDLGLSEEDELAMREAHRRRLIVDREAALKLIADAGALVDAAVRRRPLFSGAPFTLPGHEEDPR*
Ga0180104_11664942	3300014884	Soil	MRAAPFDLGLGAEDERAIREARLGRFVLDREAALKLIADASPLLDAAVRRRPVLSGAPFTLPGHEELPGS*
Ga0180077_10117623	3300015255	Soil	MAAPFDLGLGAEDERAIREARFGRFVLDREAALKLITDASPLVDAAVRRRPVLSGAPFTLPGHKELPGS*
Ga0187786_103813292	3300017944	Tropical Peatland	MTPKPFDLGLTEEDERALREARLHRTRIDLQVALRLIAEWGPLVDAAVRRRPLFHGEPFALPGHREGS
Ga0184616_101203321	3300018055	Groundwater Sediment	MKAAPFDLGLGPEDERAIREARCGRFVLDREAALKLIADASPLVDAAVRRRPVLSGAPFTLPGHEELPGW
Ga0184615_101862543	3300018059	Groundwater Sediment	MSAAFFDLGLSEEDELAMREAHRRRLIVDREAALKLIADAGALVDAAVRRRPLFSGAPFTLPGHEEDPR
Ga0184615_104567191	3300018059	Groundwater Sediment	MRAARFDLGLGPEDERAIREARFGRFVLDREAALKLITDASPLVDAAVRRRPVLSGAPFTLPGHKELPG
Ga0184631_102659952	3300018070	Groundwater Sediment	MRAARFDLGLGAEDERAIREARCGRFVLDREAALKLITDASPLVDAAVRHRPVLAGAPFTLPGH
Ga0184640_102415162	3300018074	Groundwater Sediment	LRVAAFDLGLCAEDERAMREARLGRFVLDRVAALRLIADASPLVDAAVRRRPLLSGAPFTLPGHEDPAGS
Ga0210377_100360283	3300021090	Groundwater Sediment	MTAAPLDLGLGAEDERAIREARRGRFVLDREAALQLMTDASPLVDAAVRRRPVLSGRPFTLPGHEELQGS
Ga0210377_105968401	3300021090	Groundwater Sediment	MRAAPFDLGLGAEDERAIREARRGRFVLDREAALKLITDASPLVDAAVRRRPVLSGPPFTLPGHEELPGS
Ga0209109_100657833	3300025160	Soil	MSAGFFDLGLSAEDELAMREARLRRLVVDPEAALRLIADAGACVDAAVRRRPLFSGAPFTLPAHEEDPG
Ga0209108_100525663	3300025165	Soil	MSAGFFDLGLSAEDELAMREARLRRLVVDPEAALRLIADAGPLVDAAVRRRPLFSGAPFTLLGHEEDAG
Ga0209640_100658963	3300025324	Soil	MSAGFFDLGLSAEDELAMREARIRRLVVDPEAALRLIADAGPLVDAAVRRRPLFSGAPFTLLGHEEDAG
Ga0210131_10071633	3300025551	Natural And Restored Wetlands	MRPLPFDLGLREEDERAIQQARRRQSFVLDREAAFRLIADASALVDGAVRRRPLLLGAAFTLPGLEESSDV
Ga0210126_1108302	3300025946	Natural And Restored Wetlands	MSPLPFDLGLSEEDERALRQARRERHVIDGEAALRLIKDASQLVDAAVRRRPLFSGAPLTLPGDQGPFRSGGSEG
Ga0210066_10152122	3300025951	Natural And Restored Wetlands	MSLLPFDLGLSEEDERALRQARRERHVIDGEAALRLIKDASQLVDAAVRRRPLFSGAPFTLPGDQGPFRSGGSEG
Ga0210091_10342551	3300025975	Natural And Restored Wetlands	MRAALFDLGLGAEDERAIREARRGRFVLDREAALKLMTDASPLVDAAVRRRPVLSGAP
Ga0209683_101139721	3300027840	Wetland Sediment	MRAAAFDLGLDAEDERAIREARSGPFVLDREAALELIRDASPLVDAAVRRRPVLSGAPFTLPGHEELPGS
Ga0209798_101177663	3300027843	Wetland Sediment	MRAAPFDLGLGAEDERAIREARCGRFVLDREAALKLIRDASPLVDAAVRRRPVLSGAPFTLPGHEELPGS
Ga0209397_101966942	3300027871	Wetland	MRAAPFDLGLSAEDERAIREARCGRFVLDREAALKLISDASPLVDAAVRRRPVPKGPPFTLPGHEELPGS
Ga0209293_106747952	3300027877	Wetland	MKGQRFDLGLTAEDERAMRDGRRERPVLDPEGALRLIAGASALVDAAVRRRPLLSGVPFTLPGHREPSDA
Ga0209450_100837562	3300027885	Freshwater Lake Sediment	MKGQRFDLGLTAEDERAMRDGRRERPVLDPEGALRLMAEASALVDAAVRRRPLFSGVPFTLPGHREPSGA
Ga0209254_100314306	3300027897	Freshwater Lake Sediment	MRAAPFDLGLGADDERAIREARRGRFVLDREAALELMTDASPLVDAAVRRRPLLSGPPFTLPGHKELPGS
Ga0209253_100637915	3300027900	Freshwater Lake Sediment	MRAALFDLGLSAEDERAIREARSGRFVLDREAALRLIRDASPLVDAAVRRRPVLSGPPFTLPGHEELPGS
Ga0209253_103185201	3300027900	Freshwater Lake Sediment	MTVGLFDLGLSEEDELAMREARLRRVAVDREAALRLISDASALVDAAVRRRPLFSGAPFTLPGHEETPAA
Ga0299906_100710203	3300030606	Soil	MNDKVFDLGLSREDELAMREARLLRFVIDRESAFRLIADAGALVDAAVRRRALPSGAPFTLPGHEEDPDG
Ga0268386_101791881	3300030619	Soil	MKAPAFDLGLSSEDERAMREARRGRFVLAPEAALRLIADVSPLVDAAVRRRPLSGGSPFTLPGHRESSGAQ
Ga0247727_101526403	3300031576	Biofilm	VSVGFFDLGLCEEDELAIREARLRRFVVDREAALRLISDAGALVDAAVRRRPLFSGAPFTLPGHEEDPGS
Ga0315290_106954962	3300031834	Sediment	MRAAPFDLGLGAEDERAIREARAGRFVLDREAALELIRDASPLVDAAVRRRPVLSGPPFTLPGHEELPGS
Ga0214473_104813682	3300031949	Soil	MRGVTFDLGLDEEDERAMWKARRERVVLDRETALELIADASEVVDAAVRRRPLFSGAPFTLPGDKERSGS
Ga0214473_109575861	3300031949	Soil	MTMNPFDLGLSEEDQRALREARSRRFELDGQVALRLIAEWGPLVDAAVRRRPLFQGAPFTLPGHKEDPGS
Ga0214473_115867902	3300031949	Soil	MRAAPFDLGLSEEDERALRAARQGAFEIDREAALKLMADASPTVDAAVRRRPLFTGAPFTLPGHGDARRS
Ga0315278_103472015	3300031997	Sediment	RAAPFDLGLSAEDERAIREARFGRFVLDREAALELIRDASPLVDAAVRRRPVLAGAPFTLPGHEELPGT
Ga0315292_101411391	3300032143	Sediment	MRAAPFDLGLGAEDERAIREARSGRFVLDREAALELIRDASPLVDAAVRCRPVLSGAPFTLPGHEELPGS
Ga0315283_104107601	3300032164	Sediment	DERAIREARRGRFALDREAALELIRDASPLVDAAVRRRPVLAGAPFTLPGHEELPGT
Ga0315276_106346011	3300032177	Sediment	PMRAAPFDLGLGAEDERAIREARSGRFVLDREAALKLITDASGVVDAAVRRRPVLSGPPFTLPGHEELPGS
Ga0315276_117922302	3300032177	Sediment	MRAAPFDLGLGAEDERAIREARSGRFVLDREAALKLITDASPLVDAAVRRRPVLSGAPFTLPGHEELPGS
Ga0315271_102544383	3300032256	Sediment	MRAAPFDLGLGAEDERAIREARAGRFVLDREAALELIRDASPLVDAAVRRRSVLSGPPFTLPGHKELPGS
Ga0315270_101209452	3300032275	Sediment	MRAAPFDLGLGAEDERAIREARAGRFVLDREAALELIADASPLVDAAVRRRPVLSGPPFTLPGHKELPGS
Ga0315286_111085122	3300032342	Sediment	MRAAAFDLGLGAEDERAIREARSGRFVLDREAALELIRDASPLVDAAVRRRPVLSGPPFTLPGHEELPGS
Ga0315287_104568212	3300032397	Sediment	MRAAPFDLGLGAEDERAIREARRGRFALDREAALALITDASPLVDAAVRRRPVLSGPPFTLPGHKELPGS
Ga0315287_107879533	3300032397	Sediment	MRAAPFDLGLSAEDERAIREARRGRFALDREAALELIRDASPLVDAAVRRRPVLAGAPFTLPGHEELPGT
Ga0315275_122240442	3300032401	Sediment	MRAAPFDLGLGAEDERAIREARSGRFVLDREAALKLITDASGVVDAAVRRRPVLSGPPFTLPGHEELPGS
Ga0315273_101868805	3300032516	Sediment	MRAAPFDLGLSAEDERAIREARFGRFVLDREAALKLITDASPLVDAAVRRRPLLSGAPFTLPGHKELPGS
Ga0335070_105134372	3300032829	Soil	MTMDPFDLGLTEEDERGLREARSQRFKVDRLVALRLIAEWGPLVDAAVRRRPLFRGAPFTLPGHEEDPGS
Ga0335084_101543644	3300033004	Soil	MTARRFDLGLTEEDERALREARRRRPEIDRELALKLIAEWGPLVDAAVRRRPLLRGAPFTLPGHEEDPGS
Ga0335084_101943033	3300033004	Soil	MSALRFDLGLSPEDERAIREARRRPITIDAEAALRLIRDVSRLVDAAVRRRPTLRGAPFVLPGREHDAERS
Ga0335084_104520812	3300033004	Soil	MSEHVDFDLGLSEEDVHAIRVARQTRSAPDGAAALRLIADATSLVDAAIRRRPLLSGAPFELPCHAETGGPDAVP
Ga0335084_110680412	3300033004	Soil	MTTRPFDLGLTEEDERALREARSRPFAVDGQVALRLIAEWGPLVDAAVRRRPLFRGAPFTLPGHQEDPGS
Ga0316605_104981512	3300033408	Soil	MRAAPFDLGLGAEDECAIREARRGRFVLDREAALKLMTDASPLVDAAVRRRPVLSGPPFTLPGHEELPGS
Ga0316605_110927981	3300033408	Soil	GSPMKAAPFDLGLGAEDERAIREARRGRFVLDREAALKLISGASALVDAAVRRRPVLTGPPFTLPGHEELPGS
Ga0316605_114683742	3300033408	Soil	MKAAPFDLGLEADDERAIREARSARFVLDRAAALRLIRDASPFVDAEVRRRPVLSGAPFTLPGHQEVPGS
Ga0316619_115919511	3300033414	Soil	MKGQRFDLGLSPEDERAMREGRRERPVLDPEGALRLMAGASALVDAAVRRRPLLSGVPFTLPGHREPSDA
Ga0316622_1001671651	3300033416	Soil	MRAAPFDLGLSAEDERAIREARCGRFVLDREAALKLISDASPLVDAAVRRRPVPKGPPFTLPDHEELPGS
Ga0316622_1003090283	3300033416	Soil	VKGRRFDLGLTAEDERAMRDGRRERPVLDPDGALRLMAEASALVDAAVRRRPLSSGVPFTLPGHREPSGA
Ga0316622_1007506642	3300033416	Soil	MKGQRFDLGLTPEDERAMRDGRRERPVLEPEGALRLMAEASALVDAAVRRRPLFSGVPFTLPGHREPSGA
Ga0326726_100264632	3300033433	Peat Soil	MTTHRFDLGLTEEDQRALREARSRRIEVDREVALRLIAEWGPLVDAAVRRRPVPRGAPFTLPGHEDDPRS
Ga0326726_120196211	3300033433	Peat Soil	PVTKNPFDLGLTDEDRRALREAHLRPMPVDRSIALRLIAEWGPHVDAAVRRRPLFRGAPFTLPGHREDPGS
Ga0316620_107651212	3300033480	Soil	MTTSPFDLGLTEEDERALREARWQRFEIDRQVALRLIAEWGPLVDAAVRRRPLFQGAPFTLPGHEEGPDS
Ga0316627_1003231683	3300033482	Soil	MRAAPFDLGLGAEDERAIREARRGRFVLDREAAIRLMADASPLVDAAVRRRPVLSGPAFTLPGHEELPGW
Ga0316626_103960761	3300033485	Soil	MTTNRFDLGLTEEDQRGLHEARSRRCEIDRQVALRLIAEWGPLVDAAVRRRPLFRGAPFTLPGHEEDRGS
Ga0316624_100460163	3300033486	Soil	MTKDPFDLGLTDEDERALREARARRYDVDRQVALRLIAEWGPLVDAAVRRRPLFRGAPFTLPGHEEGPTS
Ga0316628_1036367402	3300033513	Soil	MTPRHFDLGLTDEDERALHEARARRYDVDRQVALRLIAEWGPLVDAAVRRRPLFRGAPFTLPGHEDDPGS
Ga0316617_1023550182	3300033557	Soil	PFDLGLSAEDERAIREARCGRFVLDREAALKLISDASPLVDAAVRRRPVPKGPPFTLPDHEELPGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098566

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences