NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096161

Metagenome Family F096161

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096161
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 49 residues
Representative Sequence ASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTK
Number of Associated Samples 56
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 17.82 %
% of genes near scaffold ends (potentially truncated) 93.33 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 50
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.286 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen
(79.048 % of family members)
Environment Ontology (ENVO) Unclassified
(62.857 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.810 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 29.55%    β-sheet: 6.82%    Coil/Unstructured: 63.64%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF16875Glyco_hydro_36N 4.76
PF069833-dmu-9_3-mt 2.86
PF11066DUF2867 1.90
PF00175NAD_binding_1 1.90
PF01475FUR 1.90
PF08867FRG 1.90
PF14310Fn3-like 1.90
PF06283ThuA 1.90
PF08327AHSA1 0.95
PF04397LytTR 0.95
PF13431TPR_17 0.95
PF00005ABC_tran 0.95
PF01926MMR_HSR1 0.95
PF00248Aldo_ket_red 0.95
PF03412Peptidase_C39 0.95
PF13950Obsolete Pfam Family 0.95
PF13905Thioredoxin_8 0.95
PF08206OB_RNB 0.95
PF02657SufE 0.95
PF00724Oxidored_FMN 0.95
PF00270DEAD 0.95
PF01040UbiA 0.95
PF01451LMWPc 0.95
PF02397Bac_transf 0.95
PF01243Putative_PNPOx 0.95
PF00892EamA 0.95
PF14066DUF4256 0.95
PF02283CobU 0.95
PF02256Fe_hyd_SSU 0.95
PF10590PNP_phzG_C 0.95
PF14054DUF4249 0.95
PF01541GIY-YIG 0.95
PF00072Response_reg 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 2.86
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 2.86
COG0735Fe2+ or Zn2+ uptake regulation protein Fur/ZurInorganic ion transport and metabolism [P] 1.90
COG4813Trehalose utilization proteinCarbohydrate transport and metabolism [G] 1.90
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 0.95
COG0557Exoribonuclease RTranscription [K] 0.95
COG1158Transcription termination factor RhoTranscription [K] 0.95
COG1278Cold shock protein, CspA familyTranscription [K] 0.95
COG19022,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) familyEnergy production and conversion [C] 0.95
COG2087Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferaseCoenzyme transport and metabolism [H] 0.95
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 0.95
COG2166Sulfur transfer protein SufE, Fe-S cluster assemblyPosttranslational modification, protein turnover, chaperones [O] 0.95
COG4624Iron only hydrogenase large subunit, C-terminal domainEnergy production and conversion [C] 0.95
COG4776Exoribonuclease IITranscription [K] 0.95


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.29 %
All OrganismsrootAll Organisms45.71 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002024|MIS_1168950Not Available1261Open in IMG/M
3300002026|MIS_10027223All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes5786Open in IMG/M
3300002026|MIS_10028843All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes5592Open in IMG/M
3300004154|Ga0066603_10587303Not Available527Open in IMG/M
3300010352|Ga0116247_10359836All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1148Open in IMG/M
3300014831|Ga0167340_1020009All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes2543Open in IMG/M
3300025316|Ga0209697_10202164Not Available1133Open in IMG/M
3300025836|Ga0209748_1015685All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes3389Open in IMG/M
3300025864|Ga0209429_10339458All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300025864|Ga0209429_10354219All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300028645|Ga0302158_1033465Not Available781Open in IMG/M
3300028646|Ga0302159_10044115Not Available982Open in IMG/M
3300028649|Ga0302162_10164369All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300028650|Ga0302170_10006145All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3898Open in IMG/M
3300028650|Ga0302170_10065220Not Available938Open in IMG/M
3300028650|Ga0302170_10200681Not Available509Open in IMG/M
3300028651|Ga0302171_10036586All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1220Open in IMG/M
3300028652|Ga0302166_10098872All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes649Open in IMG/M
3300028665|Ga0302160_10009512All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1662Open in IMG/M
3300028665|Ga0302160_10051421Not Available835Open in IMG/M
3300028665|Ga0302160_10116375All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes600Open in IMG/M
3300028676|Ga0302167_10144032Not Available679Open in IMG/M
3300028678|Ga0302165_10067158Not Available948Open in IMG/M
3300028678|Ga0302165_10082101Not Available855Open in IMG/M
3300028738|Ga0302292_1031189Not Available2230Open in IMG/M
3300028738|Ga0302292_1116923All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes934Open in IMG/M
3300028738|Ga0302292_1205180All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album646Open in IMG/M
3300028739|Ga0302205_10054076Not Available1041Open in IMG/M
3300028763|Ga0302204_1022037All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1441Open in IMG/M
3300028763|Ga0302204_1053045All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300028764|Ga0302260_1040771All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → unclassified Paludibacter → Paludibacter sp.961Open in IMG/M
3300028769|Ga0302213_1002390All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes8171Open in IMG/M
3300028769|Ga0302213_1028526All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1729Open in IMG/M
3300028769|Ga0302213_1114814All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp.743Open in IMG/M
3300028772|Ga0302209_10094662All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300028774|Ga0302208_10135348Not Available602Open in IMG/M
3300028857|Ga0302289_1086847Not Available722Open in IMG/M
3300028857|Ga0302289_1152714Not Available530Open in IMG/M
3300028858|Ga0302216_1166930Not Available507Open in IMG/M
3300028862|Ga0302296_1007412All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes6348Open in IMG/M
3300028862|Ga0302296_1010682All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5071Open in IMG/M
3300028862|Ga0302296_1021666All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → unclassified Paludibacter → Paludibacter sp.3224Open in IMG/M
3300028864|Ga0302215_10009653All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae5798Open in IMG/M
3300028864|Ga0302215_10035004Not Available2520Open in IMG/M
3300028864|Ga0302215_10236423All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium689Open in IMG/M
3300028868|Ga0302163_10070688Not Available853Open in IMG/M
3300029981|Ga0302293_10077973All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → unclassified Prolixibacteraceae → Prolixibacteraceae bacterium1109Open in IMG/M
3300029981|Ga0302293_10091070Not Available1006Open in IMG/M
3300029981|Ga0302293_10092106All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300029981|Ga0302293_10126260All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium821Open in IMG/M
3300029981|Ga0302293_10131791All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → Dyadobacter alkalitolerans800Open in IMG/M
3300029981|Ga0302293_10214707Not Available595Open in IMG/M
3300029983|Ga0302284_1071893All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1139Open in IMG/M
3300029989|Ga0311365_10263902Not Available1485Open in IMG/M
3300029989|Ga0311365_10318443All Organisms → cellular organisms → Bacteria1344Open in IMG/M
3300029989|Ga0311365_10320810Not Available1338Open in IMG/M
3300029989|Ga0311365_10535935Not Available1014Open in IMG/M
3300029989|Ga0311365_10722909Not Available862Open in IMG/M
3300029989|Ga0311365_11459081Not Available587Open in IMG/M
3300029990|Ga0311336_10538458Not Available992Open in IMG/M
3300029990|Ga0311336_11006782Not Available723Open in IMG/M
3300029995|Ga0302210_10084866Not Available890Open in IMG/M
3300029995|Ga0302210_10126505Not Available715Open in IMG/M
3300030000|Ga0311337_10993743Not Available731Open in IMG/M
3300030000|Ga0311337_11611954Not Available569Open in IMG/M
3300030001|Ga0302272_1007401All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4328Open in IMG/M
3300030001|Ga0302272_1041796Not Available1431Open in IMG/M
3300030001|Ga0302272_1137706All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp.664Open in IMG/M
3300030001|Ga0302272_1189217Not Available544Open in IMG/M
3300030002|Ga0311350_10056731All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales3416Open in IMG/M
3300030002|Ga0311350_10536088All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1051Open in IMG/M
3300030002|Ga0311350_11777901All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300030005|Ga0302174_10088280Not Available825Open in IMG/M
3300030005|Ga0302174_10112937Not Available728Open in IMG/M
3300030014|Ga0302175_10180810All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales507Open in IMG/M
3300030019|Ga0311348_11248156All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes → Paludibacter propionicigenes WB4552Open in IMG/M
3300030047|Ga0302286_10261139Not Available871Open in IMG/M
3300030048|Ga0302273_1041021Not Available1386Open in IMG/M
3300030048|Ga0302273_1097551All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae869Open in IMG/M
3300030048|Ga0302273_1107488Not Available825Open in IMG/M
3300030048|Ga0302273_1214512All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300030055|Ga0302173_10348213Not Available564Open in IMG/M
3300030114|Ga0311333_10024188All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides ihuae4188Open in IMG/M
3300030114|Ga0311333_10516438Not Available980Open in IMG/M
3300030339|Ga0311360_10156891Not Available1873Open in IMG/M
3300030492|Ga0302212_1107449All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium742Open in IMG/M
3300030673|Ga0302287_10260638Not Available510Open in IMG/M
3300030943|Ga0311366_10129697All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes2169Open in IMG/M
3300030943|Ga0311366_10556385Not Available998Open in IMG/M
3300030943|Ga0311366_10795768Not Available820Open in IMG/M
3300031244|Ga0302297_1032458Not Available1000Open in IMG/M
3300031244|Ga0302297_1056370Not Available733Open in IMG/M
3300031573|Ga0310915_10824529Not Available652Open in IMG/M
3300031722|Ga0311351_10046992All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales3380Open in IMG/M
3300031722|Ga0311351_10143807All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1814Open in IMG/M
3300031722|Ga0311351_10528033Not Available896Open in IMG/M
3300031722|Ga0311351_11087407Not Available613Open in IMG/M
3300031819|Ga0318568_10657265Not Available652Open in IMG/M
3300031918|Ga0311367_12060942All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter → environmental samples → uncultured Segetibacter sp.549Open in IMG/M
3300031918|Ga0311367_12269047Not Available519Open in IMG/M
3300033408|Ga0316605_11098571Not Available766Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen79.05%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog8.57%
Sinkhole FreshwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Sinkhole Freshwater2.86%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater0.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.95%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge0.95%
Raw Primary SludgeEngineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Raw Primary Sludge0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002024Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 1k-1.5kEnvironmentalOpen in IMG/M
3300002026Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 5k+EnvironmentalOpen in IMG/M
3300004154Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8EnvironmentalOpen in IMG/M
3300010352AD_JPHWcaEngineeredOpen in IMG/M
3300014831Raw sludge microbial communities from sewage treatment plant in Sweden - SWESTP63 - Kappala-primary 226EngineeredOpen in IMG/M
3300025316Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025836Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025864Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)EnvironmentalOpen in IMG/M
3300028645Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_1EnvironmentalOpen in IMG/M
3300028646Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2EnvironmentalOpen in IMG/M
3300028649Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2EnvironmentalOpen in IMG/M
3300028650Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_1EnvironmentalOpen in IMG/M
3300028651Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2EnvironmentalOpen in IMG/M
3300028652Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3EnvironmentalOpen in IMG/M
3300028664Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_1EnvironmentalOpen in IMG/M
3300028665Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3EnvironmentalOpen in IMG/M
3300028676Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_1EnvironmentalOpen in IMG/M
3300028678Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2EnvironmentalOpen in IMG/M
3300028738Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_1EnvironmentalOpen in IMG/M
3300028739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3EnvironmentalOpen in IMG/M
3300028763Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_1EnvironmentalOpen in IMG/M
3300028764Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_4EnvironmentalOpen in IMG/M
3300028769Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_1EnvironmentalOpen in IMG/M
3300028772Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_1EnvironmentalOpen in IMG/M
3300028774Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_3EnvironmentalOpen in IMG/M
3300028857Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_2EnvironmentalOpen in IMG/M
3300028858Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_2EnvironmentalOpen in IMG/M
3300028862Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_1EnvironmentalOpen in IMG/M
3300028864Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_1EnvironmentalOpen in IMG/M
3300028868Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3EnvironmentalOpen in IMG/M
3300029981Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_2EnvironmentalOpen in IMG/M
3300029983Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_1EnvironmentalOpen in IMG/M
3300029989III_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300029995Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2EnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030001Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_2EnvironmentalOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030003Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3EnvironmentalOpen in IMG/M
3300030005Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_2EnvironmentalOpen in IMG/M
3300030014Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3EnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030047Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3EnvironmentalOpen in IMG/M
3300030048Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3EnvironmentalOpen in IMG/M
3300030055Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_1EnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030492Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_2EnvironmentalOpen in IMG/M
3300030673Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_4EnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031244Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_2EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031722II_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MIS_116895013300002024Sinkhole FreshwaterDGFSQLSASFSSEAGAVLTFLLTFCVKTKSESGFGAESPTLKY*
MIS_1002722363300002026Sinkhole FreshwaterGASLDGFSQLSASFSSEAGAVLTFLLTFCVKTKSKSGFGAESPTLNC*
MIS_1002884313300002026Sinkhole FreshwaterFSQLSASFSNEAGAVLTFLLTFCVKTKSKSGFKAEAPVVSD*
Ga0066603_1058730313300004154FreshwaterLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKQNNFFYMYYDLDSCF*
Ga0116247_1035983613300010352Anaerobic Digestor SludgeLSEERASLDGFSQLNVSFSCEAGAVLTFFAYFFVARQKSKSGFRGETPIGFNVMPC*
Ga0167340_102000913300014831Raw Primary SludgeSWRKKLSCLSDKGASLDGFSQLSASFSSEAGAVLTFLFTFCVKTKSKSGLGAEAPVK*
Ga0209697_1020216433300025316Freshwater Lake HypolimnionFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQKNFL
Ga0209748_101568513300025836Arctic Peat SoilSLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKLNSFY
Ga0209429_1033945823300025864Arctic Peat SoilLDGFSQLNASFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKLNSFY
Ga0209429_1035421923300025864Arctic Peat SoilLDGFSQLNASFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKQNNF
Ga0302158_103346513300028645FenLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQNNFS
Ga0302159_1004411523300028646FenSWRLKLSCLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQNNFS
Ga0302162_1016436923300028649FenASLDGFSQLSVSFLSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNSFLLMHYGLQ
Ga0302170_1000614513300028650FenDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQNNFS
Ga0302170_1006522023300028650FenLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQ
Ga0302170_1020068113300028650FenLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEA
Ga0302171_1003658633300028651FenSCLSDEGASLDGFSQLNASFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNNFI
Ga0302166_1009887213300028652FenASLDGFSQLSVSFSSEAGGVLTFLLTFCVKTKSKSGFGAEAPIKQNNFLLILTS
Ga0302164_1008171813300028664FenSEAGVVLTFLLTFCVKTKSKSGFGAEAPIEQNNFF
Ga0302160_1000951213300028665FenCLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQNNFS
Ga0302160_1005142113300028665FenLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQ
Ga0302160_1011637523300028665FenLDGFSQLSVSFSSEAGGVLTFLLTFCVKTKSKSGFGAEAPIKQNNFLLILTS
Ga0302167_1000371213300028676FenSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKQNEFV
Ga0302167_1014403223300028676FenASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNIFFKYTTG
Ga0302165_1006715813300028678FenLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNIFFKYTTG
Ga0302165_1008210123300028678FenQLSVSFSIEADAVLTFLLTFCGKTKSKSGFGAEAPIKQNNFS
Ga0302292_103118913300028738FenGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTKK
Ga0302292_111692313300028738FenKLSCLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQLFLNAIRVIYY
Ga0302292_120518013300028738FenWDSFSQLSASFSSEAGAVLTFLLTFCVKTKSMSGFGAEAPEN
Ga0302205_1005407613300028739FenKLSCLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNIFFKYTTG
Ga0302204_102203723300028763FenWRLKLSCLSDKGASLDGFSQLSVSFSIEADAVLTFLLTFCGKTKSKSGFGAEAPIKQNNF
Ga0302204_105304523300028763FenRLKLSCLSDEGASLDGFSQLNASFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPI
Ga0302260_104077133300028764FenASFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNNFI
Ga0302213_100239043300028769FenLSNEGASLDGFSQLSVGFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTKQK
Ga0302213_102852613300028769FenLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQNIFF
Ga0302213_111481423300028769FenLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPAKQSNFFK
Ga0302209_1009466213300028772FenSCLSDEGASLDGFSQLNASFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPI
Ga0302208_1013534813300028774FenLDGFSQLNVSFSSEAGVVLTFLLTFCGKTKSKSGFGAEASINKNNFYINSTLTLVTSE
Ga0302289_108684713300028857FenSDKGASLDGFSQLSVSFSIEADAVLTFLLTFCGKTKSKSGFGAEAPIKQNNFS
Ga0302289_115271413300028857FenQLNVSFSSEAGEVLTFLLTFCVKTKSKSGSGAEAPT
Ga0302216_116693013300028858FenDEGASLDSFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPAKQNNFF
Ga0302296_100741213300028862FenSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTKK
Ga0302296_101068283300028862FenLSDGGASLDGFSQLSVSFSSEAGVVLTFLLTFCGKTKSKSGFGAEASIKQNNFF
Ga0302296_102166653300028862FenLSDGGASLDGFSQLSVSFSSEAGVVLTFLLTFCGKTKSKSGFWAEAPIKQNNFF
Ga0302296_123864013300028862FenVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPVKQNDFF
Ga0302215_1000965313300028864FenASLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKQNEFV
Ga0302215_1003500423300028864FenASLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPVKQNDFF
Ga0302215_1023642323300028864FenSLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTKK
Ga0302163_1007068813300028868FenLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAE
Ga0302293_1007797313300029981FenLSDEGASLDGFSQLSVSFLSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNSFLLMHYG
Ga0302293_1009107013300029981FenGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNIFFKYTTG
Ga0302293_1009210613300029981FenASLDGFSQLSVSFSSETGAVLTFLLTFCVKTKSKSGFGAEALINQNNFF
Ga0302293_1012626023300029981FenKLSCLSDGGASLDGFSQLNVSFSSEAGEVLTFLLTFCVKTKSKSGFGAEAPIK
Ga0302293_1013179123300029981FenLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPTKK
Ga0302293_1021470713300029981FenLKLSCLSDEGASLDGFSQLNVSFSSEAGEVLTFLLTFCVKTKSKSGSGAEAPT
Ga0302284_107189313300029983FenCLSDEGASLDGFSQLHVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPTKRNIFC
Ga0311365_1026390223300029989FenCLSDEGASLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPVKQNDFF
Ga0311365_1031844333300029989FenLDGFSQLNVSFSSEAGVVLTFLLTFCGKTKSKSGFGAEASINKNNFYINSTLTLVTS
Ga0311365_1032081023300029989FenWRLKLSCLSDKGASLDGFSQLSASFSSEAGAVLTFLLPFCVKTKRKSGFGAEAPIKLNIF
Ga0311365_1053593523300029989FenLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNIFFKYTTG
Ga0311365_1072290913300029989FenSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGVEAPTK
Ga0311365_1145908113300029989FenQLSVSFSSEAGVVLTFLLTFCVKTKSKSGCGAEAPTKQNNFF
Ga0311336_1053845813300029990FenLSDEGASLDGFSQLSAGFSSEAGAVLTFLLTFCVKTKSKSGLGAE
Ga0311336_1100678213300029990FenASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTK
Ga0302210_1008486623300029995FenLDGFSQLSVSFSSETGVVLTFLLTFCVKTKSKSGFGAEAPIKQNSFLLMHYGLMSYNFEPCTLQS
Ga0302210_1012650513300029995FenVSFSSEAGAVLTFLLPFCVKTKRKSGLGAEAPIKLSNFF
Ga0311337_1099374323300030000FenLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAAINQTTFSK
Ga0311337_1161195413300030000FenLSCLSDEGASLDGFSQLSAGFSSEAGAVLTFLLTFCVKTKSKSGLGAEAPIKQNNFF
Ga0302272_100740133300030001BogWRLKLSCLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAPIKQNNF
Ga0302272_104179623300030001BogKLSCLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQLF
Ga0302272_113770623300030001BogLDSFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAP
Ga0302272_118921713300030001BogLDGFSQLNVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEA
Ga0311350_1005673163300030002FenLDGFSQLSVSFSSEAGVVLTFLLTFCGKTKSKSGFWAEAPIKQNNFF
Ga0311350_1053608813300030002FenLSDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAE
Ga0311350_1177790123300030002FenSCLSDEGASLDGFSQLNVSFSSEAGEVLTFLLTFCVKTKSKSGFGAEAPIK
Ga0302172_1015125713300030003FenGAVLTFLLTFCVKTKSKSGFGAEAPIKQNIFFKYTTG
Ga0302174_1008828013300030005FenLDGFSQLSVSFSSEAGAVLTFLLTFCGKTKSKSGFGAEAP
Ga0302174_1011293713300030005FenKLSCLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTK
Ga0302175_1018081023300030014FenEGASLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIK
Ga0311348_1124815623300030019FenKLSCLSDEGASLDGFSQLSVSFSSESGVVLTFLLTFCVKTKSKSGFGAEAPTEQNNFLKCTKNYCYIS
Ga0302286_1026113913300030047FenLDGFSQLNVSFSSEAGVVLTFLLTFCGKTKSKPGFGAEASINK
Ga0302273_104102113300030048BogSLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTK
Ga0302273_109755133300030048BogQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIKQNNFHLTLTS
Ga0302273_110748823300030048BogKLSCLSDEGASLDGFSQLSVSFSSKAGAVLTFLLTFCGKTKSESGFGAEAPIIKHNVF
Ga0302273_121451223300030048BogLDGFSQLSVSFSSEAGGVLTFLLTFCVKTKSKSGFGAEAPIKQNKF
Ga0302173_1034821313300030055FenLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEA
Ga0311333_1002418853300030114FenLSNEGASLDGFSQLSVGFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTKQ
Ga0311333_1051643813300030114FenLKLSCLSDEGASLDGFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKQNEFV
Ga0311360_1015689143300030339BogSCLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPIK
Ga0302212_110744913300030492FenLDGFSQLNVSFSSEAGEVLTFLLTFCVKTKSKSGFGAEAPIK
Ga0302287_1026063813300030673FenLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPI
Ga0311366_1012969743300030943FenLSDEGASLDGFSQLSVSFSSEAGAVLNFLLTFCFKTKSKSGF
Ga0311366_1055638513300030943FenSWRLKLSCLSDEGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTK
Ga0311366_1079576813300030943FenLDGFSQLNVSFSSEAGVVLTFLLTFCGKTKSKSGFGAE
Ga0302297_103245833300031244FenLSDKGASLDGFSQLSASFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPVK
Ga0302297_105637013300031244FenDKGASLDGFSQLSVSFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTK
Ga0310915_1082452913300031573SoilLSDEGASLDGFSQLSASFSSEAGEGLTFLLPFCVKTKRKSGLGAEAPANQL
Ga0311351_1004699253300031722FenGFSQLSVSFSSEAGVVLTFLLTFCGKTKSKSGFWAEAPIKQNNFF
Ga0311351_1014380713300031722FenSQLSASFSSEAGAVLTFLLTFCVKTKSKSGFGAEAPTK
Ga0311351_1052803323300031722FenGFSQLSVSFSSEAGVVLTFLLTFCGKTKSKSGFGAEASIKQNNFF
Ga0311351_1108740713300031722FenLDGFSQLNASFSSEVDAVLTFLLTFCVKTKSKLGLGAEAPIIKH
Ga0318568_1065726513300031819SoilLSDEGASLDGFSQLSASFSSEAGEGLTFLLPFCVKTKRKSGLGAEAPANQLQ
Ga0311367_1206094213300031918FenLDSFSQLSVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPIKQN
Ga0311367_1226904713300031918FenVSLDGFSQLNVSFSSEAGVVLTFLLTFCVKTKSKSGFGAEAPT
Ga0316605_1109857123300033408SoilKLPCLSDEGASLGGFSQLSASFSSEAGAVLTFLLTFCVKAKSKSGLGAEAPY


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.