Metagenome / Metatranscriptome Family F094346

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094346
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	38 residues
Representative Sequence	VSLATDTFIGPQVLTLAIPLGTLFVVLLWGFFQRRTDR
Number of Associated Samples	67
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.40 %
% of genes near scaffold ends (potentially truncated)	9.43 %
% of genes from short scaffolds (< 2000 bps)	56.60 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.245 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (31.132 % of family members)
Environment Ontology (ENVO)	Unclassified (33.019 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.52% β-sheet: 0.00% Coil/Unstructured: 48.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF09678	Caa3_CtaG	47.17
PF00115	COX1	8.49
PF08241	Methyltransf_11	0.94
PF00486	Trans_reg_C	0.94
PF00291	PALP	0.94
PF13561	adh_short_C2	0.94
PF00361	Proton_antipo_M	0.94
PF00116	COX2	0.94
PF01047	MarR	0.94
PF05235	CHAD	0.94
PF01425	Amidase	0.94
PF02630	SCO1-SenC	0.94
PF13459	Fer4_15	0.94
PF00067	p450	0.94
PF02518	HATPase_c	0.94
PF00156	Pribosyltran	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.94
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.94
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG2124	Cytochrome P450	Defense mechanisms [V]	0.94
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.94
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.94
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.25 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.25 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.25 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.58 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.58 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	21.70 %
Unclassified	root	N/A	20.75 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	2.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	21.70 %
Unclassified	root	N/A	20.75 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	2.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	20.75 %
Unclassified	root	N/A	20.75 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	2.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.75 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	12.26 %
Acidithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix	2.83 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	2.83 %
Acidiferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium	0.94 %
Ferrithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.75 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	12.26 %
Acidithrix ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	2.83 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	2.83 %
unclassified Acidiferrimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium	0.94 %
Ferrithrix thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix → Ferrithrix thermotolerans	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.75 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	12.26 %
Acidithrix ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	2.83 %
Actinobacteria bacterium 21-73-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	2.83 %
Acidiferrimicrobium sp. IK	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	0.94 %
Ferrithrix thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix → Ferrithrix thermotolerans	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908035\|B3_GZOS_CLC_ConsensusfromContig125579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
2124908040\|B4_c_ConsensusfromContig37198	Not Available	773	Open in IMG/M
2189573002\|GZIGXIF01DP7NO	Not Available	519	Open in IMG/M
3300001398\|JGI20207J14881_1045788	Not Available	817	Open in IMG/M
3300001398\|JGI20207J14881_1080757	Not Available	523	Open in IMG/M
3300001412\|JGI20173J14856_1008531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	2053	Open in IMG/M
3300003976\|Ga0064219_11086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300005861\|Ga0080006_1135447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4217	Open in IMG/M
3300005861\|Ga0080006_1140534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54466	Open in IMG/M
3300005861\|Ga0080006_1146286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	118174	Open in IMG/M
3300005861\|Ga0080006_1186494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1809	Open in IMG/M
3300005861\|Ga0080006_1197148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	58818	Open in IMG/M
3300005947\|Ga0066794_10007173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	3074	Open in IMG/M
3300005994\|Ga0066789_10205442	Not Available	830	Open in IMG/M
3300006047\|Ga0075024_100357060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300006050\|Ga0075028_100069433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1738	Open in IMG/M
3300006052\|Ga0075029_100017225	All Organisms → cellular organisms → Bacteria	4019	Open in IMG/M
3300006052\|Ga0075029_100044371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2560	Open in IMG/M
3300006052\|Ga0075029_100188432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1283	Open in IMG/M
3300006052\|Ga0075029_100859349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300006052\|Ga0075029_101118978	Not Available	547	Open in IMG/M
3300006055\|Ga0097691_1072061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300006057\|Ga0075026_100013760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3531	Open in IMG/M
3300006059\|Ga0075017_100001950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12784	Open in IMG/M
3300006059\|Ga0075017_100010011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	6025	Open in IMG/M
3300006059\|Ga0075017_100262726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1265	Open in IMG/M
3300006059\|Ga0075017_100317367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1154	Open in IMG/M
3300006059\|Ga0075017_100356404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300006059\|Ga0075017_100501134	Not Available	921	Open in IMG/M
3300006059\|Ga0075017_100587350	Not Available	851	Open in IMG/M
3300006086\|Ga0075019_10703985	Not Available	639	Open in IMG/M
3300006102\|Ga0075015_100039384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2192	Open in IMG/M
3300006162\|Ga0075030_101499218	Not Available	528	Open in IMG/M
3300006172\|Ga0075018_10117002	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300006174\|Ga0075014_100357509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300006354\|Ga0075021_10023194	All Organisms → cellular organisms → Bacteria	3489	Open in IMG/M
3300006354\|Ga0075021_10060937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2195	Open in IMG/M
3300006354\|Ga0075021_10450296	Not Available	811	Open in IMG/M
3300006638\|Ga0075522_10423644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300006795\|Ga0075520_1003841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	7603	Open in IMG/M
3300006795\|Ga0075520_1031767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2609	Open in IMG/M
3300009029\|Ga0066793_10167599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1280	Open in IMG/M
3300009623\|Ga0116133_1152878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	606	Open in IMG/M
3300010379\|Ga0136449_101088172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1274	Open in IMG/M
3300010387\|Ga0136821_1020904	All Organisms → cellular organisms → Bacteria	4283	Open in IMG/M
3300010876\|Ga0126361_11108781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300011265\|Ga0151613_1374764	Not Available	759	Open in IMG/M
3300014164\|Ga0181532_10011447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6872	Open in IMG/M
3300014168\|Ga0181534_10005168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7415	Open in IMG/M
3300014490\|Ga0182010_10007318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	5079	Open in IMG/M
3300014491\|Ga0182014_10003986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17338	Open in IMG/M
3300014492\|Ga0182013_10249097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1029	Open in IMG/M
3300014493\|Ga0182016_10030864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	4515	Open in IMG/M
3300014493\|Ga0182016_10051839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3191	Open in IMG/M
3300014493\|Ga0182016_10140915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1636	Open in IMG/M
3300014495\|Ga0182015_10161990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1515	Open in IMG/M
3300014501\|Ga0182024_10606943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300014501\|Ga0182024_10895958	Not Available	1069	Open in IMG/M
3300014501\|Ga0182024_12594004	Not Available	544	Open in IMG/M
3300014838\|Ga0182030_10021111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12222	Open in IMG/M
3300014838\|Ga0182030_10210567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2302	Open in IMG/M
3300016750\|Ga0181505_10487484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	1531	Open in IMG/M
3300017946\|Ga0187879_10120227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1498	Open in IMG/M
3300017948\|Ga0187847_10616174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	607	Open in IMG/M
3300018034\|Ga0187863_10167107	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300021401\|Ga0210393_10801027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300023090\|Ga0224558_1053359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	1632	Open in IMG/M
3300023090\|Ga0224558_1124014	Not Available	864	Open in IMG/M
3300025474\|Ga0208479_1000093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10937	Open in IMG/M
3300025482\|Ga0208715_1002929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	3862	Open in IMG/M
3300025484\|Ga0208587_1018618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2231	Open in IMG/M
3300025495\|Ga0207932_1002662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	6049	Open in IMG/M
3300025503\|Ga0209012_1000167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	107009	Open in IMG/M
3300025503\|Ga0209012_1000448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58824	Open in IMG/M
3300025503\|Ga0209012_1000503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54478	Open in IMG/M
3300025503\|Ga0209012_1002048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18690	Open in IMG/M
3300025503\|Ga0209012_1066419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	828	Open in IMG/M
3300025588\|Ga0208586_1012130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2183	Open in IMG/M
3300025650\|Ga0209385_1001625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9644	Open in IMG/M
3300025650\|Ga0209385_1068538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1234	Open in IMG/M
3300025862\|Ga0209483_1027346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2859	Open in IMG/M
3300027894\|Ga0209068_10017327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3481	Open in IMG/M
3300027894\|Ga0209068_10030896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2651	Open in IMG/M
3300027894\|Ga0209068_10587938	Not Available	647	Open in IMG/M
3300027898\|Ga0209067_10003450	All Organisms → cellular organisms → Bacteria	9045	Open in IMG/M
3300027898\|Ga0209067_10004285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	8049	Open in IMG/M
3300027898\|Ga0209067_10054197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2047	Open in IMG/M
3300027898\|Ga0209067_10675680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300027902\|Ga0209048_10491496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300027911\|Ga0209698_10253721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1404	Open in IMG/M
3300027911\|Ga0209698_10883261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300027911\|Ga0209698_10926432	Not Available	652	Open in IMG/M
3300028562\|Ga0302151_10073441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix → Ferrithrix thermotolerans	1215	Open in IMG/M
3300028565\|Ga0302145_10213185	Not Available	644	Open in IMG/M
3300028745\|Ga0302267_10128766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1197	Open in IMG/M
3300029894\|Ga0247028_1017578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2560	Open in IMG/M
3300029914\|Ga0311359_11114212	Not Available	523	Open in IMG/M
3300030020\|Ga0311344_10111209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3075	Open in IMG/M
3300030020\|Ga0311344_10924350	Not Available	691	Open in IMG/M
3300030020\|Ga0311344_10953763	Not Available	675	Open in IMG/M
3300031261\|Ga0302140_10880492	Not Available	629	Open in IMG/M
3300031670\|Ga0307374_10130454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2032	Open in IMG/M
3300032160\|Ga0311301_10731998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1380	Open in IMG/M
3300034163\|Ga0370515_0022100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 21-73-9	2918	Open in IMG/M
3300034282\|Ga0370492_0032804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2135	Open in IMG/M
3300034282\|Ga0370492_0055246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	50.94%
Terrestrial	Environmental → Terrestrial	49.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.62%
Sediment	Environmental → Aquatic → Sediment	31.13%
Freshwater	Environmental → Aquatic → Freshwater	10.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	9.43%
Peat	Environmental → Terrestrial → Peat	9.43%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	31.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.98%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	9.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.94%
Ice	Environmental → Aquatic → Freshwater → Ice	0.94%
Clay	Environmental → Terrestrial → Soil → Clay	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	31.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	16.04%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.15%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	9.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.83%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	31.13%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	14.15%
Hypersaline Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hypersaline Mat	9.43%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	7.55%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.77%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.89%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	1.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.89%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.94%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.94%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.94%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.94%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908040	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300003976	Soil microbial communities from Barrow, Alaska NGEE-2011	Environmental	Open in IMG/M
3300005861	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPADES assembly)	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010387	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 k-mer 51	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011265	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 K-mer 55	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025503	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300029894	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-A1b	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_GZOS_CLC_01293890	2124908035	Soil	MSNATDSFIGPEVLTVAIPLGTFVVVLLWGFFQRRTNRP
B4_c_00653800	2124908040	Soil	MSXATDSXIGPEVLTVXIPXGXXVVVXLWGFFQRRXXXP
FE1_00996960	2189573002	Grass Soil	VSLATDTFIGPQVLTLAIPLGTLFVVLLWGFFQRRTDR
JGI20207J14881_10457882	3300001398	Arctic Peat Soil	VSLATDMFIGPEVLTVAIPLGTLFAVMLWGFFQRRTNR*
JGI20207J14881_10807572	3300001398	Arctic Peat Soil	MGIATDIFIGGQVLTTVIPLGTLFLVCLWGFFQRRSHR*
JGI20173J14856_10085313	3300001412	Arctic Peat Soil	MTVAADNFIGPEVLTLVVPLGTLFAVLLWGFFQRRSPK*
Ga0064219_110862	3300003976	Soil	MSIATDSYIGPEVLTVAIPLGSLLLVILWGFFQRRTNRQ*
Ga0080006_11354475	3300005861	Hypersaline Mat	MNIANDTWIGPEVLTLVIPLGTLFAIILWGFFQRRNSQ*
Ga0080006_114053439	3300005861	Hypersaline Mat	VQVLSATDSFIGAQALTIAIPLGTLFVVLLWGFFQRRSHR*
Ga0080006_1146286116	3300005861	Hypersaline Mat	MNLAADTWIGPQVLTLVVPLGTLFAILLWGFFQRRSSR*
Ga0080006_11864943	3300005861	Hypersaline Mat	MNIATDSYIGAQVLTLVVPLGTLFALLLWGFFQRRSPR*
Ga0080006_119714834	3300005861	Hypersaline Mat	VSIGTDEFIGPQVLTLVIPLGTLFAVLLWGFFQRRTDR*
Ga0066794_100071734	3300005947	Soil	VSVATDSFIGAQVLTLAIPLGTLFVVCLWGFFQRRSHR*
Ga0066789_102054421	3300005994	Soil	MNLATDGYIGPQVLTLAIPLGTLFLVLLWGFFQRRSSQ*
Ga0075024_1003570602	3300006047	Watersheds	LDTDTFIGAQALTIAIPLGTLFVVCIWGFFQRRSHR*
Ga0075028_1000694332	3300006050	Watersheds	VTLDTDTFIGGQILTIAIPLGTLFVVCIWGFFQRRSHR*
Ga0075029_1000172255	3300006052	Watersheds	MNLAADPWIGPQVLTLVVPLGTLFAVLLWGFFQRRSSR*
Ga0075029_1000443714	3300006052	Watersheds	MNLAADTWIGPQVQTLVVPLGTLFVVLLWGFFQRRSSR*
Ga0075029_1001884322	3300006052	Watersheds	MNLAVDTWIGPQVLTLVVPLGTLFAVLLWGFFQRRSSR*
Ga0075029_1008593492	3300006052	Watersheds	MTTAVDPYIGAQVLTLVLPLGTLFAVLLWGFFQRRAPK*
Ga0075029_1011189782	3300006052	Watersheds	MSLATDTWIGPEVLTLAIPLGTLFVVLLWGFFQRRSSQ*
Ga0097691_10720611	3300006055	Arctic Peat Soil	MNVAVDSYIGPQVLTLVIPLGTLFAVLLWGFFQRRSSR*
Ga0075026_1000137603	3300006057	Watersheds	VTLDTDTFIGAQALTIAIPLGTLFVVCIWGFFQRRSHR*
Ga0075017_1000019509	3300006059	Watersheds	MNVATDSYIGAQVMTLALPLGVFIAGCLWGFFQRRSSP*
Ga0075017_1000100112	3300006059	Watersheds	MSLATDGYIGPEVLTLAIPLGTLFLVLLWGFFQRRSSQ*
Ga0075017_1002627262	3300006059	Watersheds	LDTDTFIGGQVLTIAIPLGTLFVVCIWGFFQRRSHR*
Ga0075017_1003173673	3300006059	Watersheds	VSPVSIATDHYVGSQVLTLAIPLGTLFVVLLWGFFQRHTDR*
Ga0075017_1003564042	3300006059	Watersheds	MDFSTDTFIGPEVLTLVVPLGTLFALLLWGFFQRHSSR*
Ga0075017_1005011342	3300006059	Watersheds	VSLATDTFIGPQVLTLAIPLGTLFVVLLWGFFQRRTDR*
Ga0075017_1005873502	3300006059	Watersheds	PNARVVSHMNLAADTWIGPQVLTLVVPLGTLFAVLLWGFFQRRSSR*
Ga0075019_107039851	3300006086	Watersheds	MNVAVDTYIGPEVLTLVIPLGTLFVVVLWGFFQRRSPR*
Ga0075015_1000393843	3300006102	Watersheds	MTVAGDNFIGPEVLTLVVPLGTLFAVLLWGFFQRRSPQ*
Ga0075030_1014992182	3300006162	Watersheds	VGIAADHYVGSQVLTIAIPLGTLFVVLLWGFFQRKSHR*
Ga0075018_101170021	3300006172	Watersheds	LDTDTFIGGQILTIAIPLGTLFVVCIWGFFQRRSHR*
Ga0075014_1003575092	3300006174	Watersheds	MNLAADTWIGPQVQTLVVPLGTLFVVLLWGFFQRRSS
Ga0075021_100231945	3300006354	Watersheds	MNISTDTWIGPEVLTLVIPLGTLFAILLWGFFQRRSPQ*
Ga0075021_100609372	3300006354	Watersheds	VDRPVTLDTDTFIGGQILTIAIPLGTLFVVCIWGFFQRRSHR*
Ga0075021_104502962	3300006354	Watersheds	VTLGTDTFIGAQALTIAIPLGTLFVVCIWGFFQRRSHR*
Ga0075522_104236442	3300006638	Arctic Peat Soil	LSVATDTFIGGQILTIAIPLGTLFAICLWGFFQRRSHR*
Ga0075520_10038413	3300006795	Arctic Peat Soil	MTVAADNFIGPEVLTLVVPLGTLFAVLLWGFFQRRSPQ*
Ga0075520_10317674	3300006795	Arctic Peat Soil	VSIATDEFIGPQVLTLAIPLGTLFVVLLWGFFQRRTHR*
Ga0066793_101675992	3300009029	Prmafrost Soil	MSPATDSFIGGQVLTLAIPLGTFFVVCLWGFFQRRTHR*
Ga0116133_11528782	3300009623	Peatland	MSIATDSFIGPEVLTVAIPLGTLFLVILWGFFQRRTNRR*
Ga0136449_1010881723	3300010379	Peatlands Soil	VSLATDSFIGPQVLTLAIPLGTLFLVLLWGFFQRRTDR*
Ga0136821_10209046	3300010387	Sediment	TDEFIGPQVLTLAIPLGTLFVVLLWGFFQRRTHR*
Ga0126361_111087812	3300010876	Boreal Forest Soil	VSLATDSFIGPQVLTLAIPLGTLFVVMLWGFFQRRTDR*
Ga0151613_13747641	3300011265	Sediment	ATDEFIGPQVLTLAIPLGTLFVVLLWGFFQRRTHR*
Ga0181532_100114478	3300014164	Bog	MSNATDSFIGPEVLTVAIPLGSFVVVLLWGFFQRRTNRQ*
Ga0181534_100051686	3300014168	Bog	MIASDSFIGPEVLTVAIPLGTLFLVLLWGFFQRRSDRW*
Ga0182010_100073185	3300014490	Fen	MSIATDSFIGPEVLTVAIPLGSFIVVLLWGFFQRRTNRQ*
Ga0182014_1000398612	3300014491	Bog	MSIATDSYIGPEVLTVAIPLGSLLLVMLWGFFQRRTNRQ*
Ga0182013_102490973	3300014492	Bog	MSIATDEFIGPQILTLVIPLGTLVVVLLWGFFQRRTNR*
Ga0182016_100308642	3300014493	Bog	VSVAADTWIGPQALTIAIPLGTLFVVLLWGFFQRRSSR*
Ga0182016_100518393	3300014493	Bog	MSIASDIFIGPEILTVAIPLGTLFLVILWGFFQRRTNRR*
Ga0182016_101409153	3300014493	Bog	MSTATDMFIGPEVLTVAIPLGTLFLVILWGFFQRRTNRR*
Ga0182015_101619903	3300014495	Palsa	MSIAADSFLGGQVLTTAIPLGTLFLVCLWGFFQRRSHQ*
Ga0182024_106069432	3300014501	Permafrost	MSIATDTFIGPEVLTVAIPLGALFLVMLWGFFQRRTNGR*
Ga0182024_108959582	3300014501	Permafrost	MSIASDIYIGPEVLTVAIPLGTLFLVMLWGFFQRRTNRR*
Ga0182024_125940042	3300014501	Permafrost	VSFATDMSIGPQVLTVAIPLGTFFAVMIWLFFQRRTARR*
Ga0182030_1002111111	3300014838	Bog	VSIATDSFIGPEVLTVAIPLGTFFLVLLWGFFQRGANKR*
Ga0182030_102105673	3300014838	Bog	MSFATDIYIGPQVLTVAIPLGTLFAVILWGFFQRRTNRR*
Ga0181505_104874842	3300016750	Peatland	MSNATDSFIGPEVLTVAIPLGSFVVVLLWGFFQRRTNRQ
Ga0187879_101202273	3300017946	Peatland	MSIATDSFIGPEVLTVAIPLGTLFVVLLWGFFQRRTNRR
Ga0187847_106161742	3300017948	Peatland	MSIATDSFIGPEVLTVAIPLGTLFVVLLWGFFQRRTNR
Ga0187863_101671073	3300018034	Peatland	VSIATDSFIGPEVLTVAIPLGTFFLVLLWGFFQRGANKR
Ga0210393_108010272	3300021401	Soil	VSLATDSFIGPQVLTLAIPLGTFFAVMLWAFFQRRTDR
Ga0224558_10533593	3300023090	Soil	VIIATDTFIGGQVLTLAIPLGTLFLVLLWGFFQRRSPR
Ga0224558_11240142	3300023090	Soil	MSIATDSFIGPEVLTVAIPLGSFIVVLLWGFFQRRTNRQ
Ga0208479_10000932	3300025474	Arctic Peat Soil	MSIATDSYIGPEVLTVAIPLGSLLLVILWGFFQRRTNRQ
Ga0208715_10029292	3300025482	Arctic Peat Soil	MNVAVDSYIGPQVLTLVIPLGTLFAVLLWGFFQRRSSR
Ga0208587_10186182	3300025484	Arctic Peat Soil	MTVAADNFIGPQVLTLVVPLGTLFAVILWGFFQRRSPR
Ga0207932_10026625	3300025495	Arctic Peat Soil	MTVASDNFIGPEVLTLVVPLGTLFAVLLWGFFQRRSPQ
Ga0209012_100016789	3300025503	Hypersaline Mat	MNLAADTWIGPQVLTLVVPLGTLFAILLWGFFQRRSSR
Ga0209012_100044830	3300025503	Hypersaline Mat	VSIGTDEFIGPQVLTLVIPLGTLFAVLLWGFFQRRTDR
Ga0209012_100050339	3300025503	Hypersaline Mat	VQVLSATDSFIGAQALTIAIPLGTLFVVLLWGFFQRRSHR
Ga0209012_10020482	3300025503	Hypersaline Mat	MNIANDTWIGPEVLTLVIPLGTLFAIILWGFFQRRNSQ
Ga0209012_10664192	3300025503	Hypersaline Mat	MNIATDSYIGAQVLTLVVPLGTLFALLLWGFFQRRSPR
Ga0208586_10121302	3300025588	Arctic Peat Soil	VSLATDSFIGPQVLTIAIPLGTFFVVVLWGFFQRRTDR
Ga0209385_10016256	3300025650	Arctic Peat Soil	MTVAADNFIGPEVLTLVVPLGTLFAVLLWGFFQRRSPQ
Ga0209385_10685382	3300025650	Arctic Peat Soil	VSIATDEFIGPQVLTLAIPLGTLFVVLLWGFFQRRTHR
Ga0209483_10273463	3300025862	Arctic Peat Soil	VSVATDSFIGAQVLTLAIPLGTLFVVCLWGFFQRRSHR
Ga0209068_100173272	3300027894	Watersheds	VDRPVTLDTDTFIGGQILTIAIPLGTLFVVCIWGFFQRRSHR
Ga0209068_100308963	3300027894	Watersheds	VTLDTDTFIGAQALTIAIPLGTLFVVCIWGFFQRRSHR
Ga0209068_105879382	3300027894	Watersheds	MSLATDGYIGPEVLTLAIPLGTLFLVLLWGFFQRRSSQ
Ga0209067_100034507	3300027898	Watersheds	MNLAADPWIGPQVLTLVVPLGTLFAVLLWGFFQRRSSR
Ga0209067_100042853	3300027898	Watersheds	MNLAVDTWIGPQVLTLVVPLGTLFAVLLWGFFQRRSSR
Ga0209067_100541972	3300027898	Watersheds	MNLAADTWIGPQVQTLVVPLGTLFVVLLWGFFQRRSSR
Ga0209067_106756802	3300027898	Watersheds	MNLAADTWIGPQVLTLVVPLGTLFAVLLWGFFQRRSSR
Ga0209048_104914961	3300027902	Freshwater Lake Sediment	MNLAVDTWIGPQVLTLVVPLGTLFAVLLWGFFQRRSS
Ga0209698_102537212	3300027911	Watersheds	LDTDTFIGGQVLTIAIPLGTLFVVCIWGFFQRRSHR
Ga0209698_108832611	3300027911	Watersheds	MNLAVDTWIGPQVLTLVVPLGTLFAVLLWGFFQRRSP
Ga0209698_109264322	3300027911	Watersheds	VGIAADHYVGSQVLTIAIPLGTLFAVLLWGFFQRKSHR
Ga0302151_100734411	3300028562	Bog	VTLATDTFIGPQVLTIAVPLGTFFAVLLWGFFQRRSHR
Ga0302145_102131852	3300028565	Bog	MSTATDMFIGPEVLTVAIPLGTLFLVILWGFFQRRTNRR
Ga0302267_101287662	3300028745	Bog	VSVAADTWIGPQALTIAIPLGTLFVVLLWGFFQRRSSR
Ga0247028_10175782	3300029894	Cryconite	MNLSTDTWIGPQVLTLVIPLGTLFAILLWGFFQRRSQQ
Ga0311359_111142122	3300029914	Bog	AADTWIGPQALTIAIPLGTLFVVLLWGFFQRRSSR
Ga0311344_101112093	3300030020	Bog	VSIAADTWIGPQALTLAIPLGTLFLVLLWGFFQRRSSR
Ga0311344_109243502	3300030020	Bog	MNLAADTWIGPQVLTLVVPLGTLFVVLLWGFFQRRSSR
Ga0311344_109537631	3300030020	Bog	MSVAMDSYIGPETLTLVVPLGTLLVVLLWGFFQRRSSR
Ga0302140_108804922	3300031261	Bog	GAPVSVAADTWIGPQALTIAIPLGTLFVVLLWGFFQRRSSR
Ga0307374_101304544	3300031670	Soil	MSVATDTFIGGQVLTIAIPLGTLFVVCLWGFFQRRSHR
Ga0311301_107319982	3300032160	Peatlands Soil	VSLATDSFIGPQVLTLAIPLGTLFLVLLWGFFQRRTDR
Ga0370515_0022100_377_493	3300034163	Untreated Peat Soil	MSSATDTFIGPQVLTLAIPLGTLFVVMLWGFFQRRTHR
Ga0370492_0032804_91_207	3300034282	Untreated Peat Soil	MNVAVDSYIGPEVLTLVIPLGTLFAVLLWGFFQRRSSR
Ga0370492_0055246_885_1001	3300034282	Untreated Peat Soil	MSIATDDFIGPQVLTLAIPLGTLFVVLLWGFFQRRTNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094346

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences