Metagenome / Metatranscriptome Family F093130

Basic Information
Family ID	F093130
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	64 residues
Representative Sequence	FENSDMFVNQRVRVLDARGLRSHGLLGQTWRETTYPNAIKYIQGQVDDYVIRDGDIFGDNFVYNTFN
Number of Associated Samples	55
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	4.72 %
% of genes from short scaffolds (< 2000 bps)	5.66 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (71.698 % of family members)
Environment Ontology (ENVO)	Unclassified (48.113 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (90.566 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1Ga0068831_1121741 2Ga0115017_12086341 3Ga0115017_12484231 4Ga0150985_1137509041 5Ga0157370_111201522 6Ga0157372_133879451 7Ga0224712_106555341 8Ga0256611_10168241 9Ga0256611_12380912 10Ga0256766_1435293 11Ga0247642_10511311 12Ga0247646_12890131 13Ga0247631_11380381 14Ga0247618_11031271 15Ga0247618_11689291 16Ga0247618_11813401 17Ga0247618_11819021 18Ga0247653_10230201 19Ga0247652_12037781 20Ga0210272_11170702 21Ga0210272_12817971 22Ga0210288_11291931 23Ga0210288_11915951 24Ga0210260_103819492 25Ga0247633_102727941 26Ga0247643_11990001 27Ga0247626_11785591 28Ga0247626_12241341 29Ga0247626_12243871 30Ga0247630_10997341 31Ga0247630_11855061 32Ga0247630_12203111 33Ga0247637_11380661 34Ga0247615_102276841 35Ga0247615_103360362 36Ga0247615_103647301 37Ga0247651_103334601 38Ga0247634_100594931 39Ga0247634_101341911 40Ga0247634_102117342 41Ga0247634_102361781 42Ga0247634_103005461 43Ga0247634_103010261 44Ga0247634_103819021 45Ga0247634_104007242 46Ga0247634_104533921 47Ga0247634_104875451 48Ga0247634_105325741 49Ga0247613_102409412 50Ga0247613_102450482 51Ga0247613_103198243 52Ga0247613_103486751 53Ga0247613_104155213 54Ga0247613_104482161 55Ga0247613_104678532 56Ga0247629_102823702 57Ga0210250_103200632 58Ga0247623_102123601 59Ga0247623_103132651 60Ga0247623_103357331 61Ga0247636_103252392 62Ga0247636_103332041 63Ga0247627_100467462 64Ga0247627_101889492 65Ga0247627_102932411 66Ga0247627_103342901 67Ga0247617_10210441 68Ga0138300_10770092 69Ga0138300_12831271 70Ga0138296_13177071 71Ga0138296_17858581 72Ga0138306_10437302 73Ga0138299_102048002 74Ga0138299_103925771 75Ga0138299_104537261 76Ga0138299_104590352 77Ga0138299_104789982 78Ga0138303_13033291 79Ga0074034_105859592 80Ga0138297_17039962 81Ga0075383_106542602 82Ga0073995_121114901 83Ga0170834_1022319101 84Ga0170822_166775322 85Ga0170824_1055476361 86Ga0170824_1118977651 87Ga0170824_1169169672 88Ga0170824_1170201581 89Ga0170824_1173144051 90Ga0170824_1175679402 91Ga0170824_1178606391 92Ga0170824_1275610881 93Ga0102761_118007941 94Ga0102761_122769331 95Ga0170820_124858851 96Ga0170819_166545632 97Ga0170818_1030985881 98Ga0170818_1089640591 99Ga0170818_1095487372 100Ga0214501_11383451 101Ga0315741_119875351 102Ga0315742_116582341 103Ga0314768_11877811 104Ga0314755_11779602 105Ga0326787_063359_322_510 106Ga0326776_029404_301_489
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1Ga0068831_1121741 2Ga0115017_12086341 3Ga0150985_1137509041 4Ga0157370_111201522 5Ga0157372_133879451 6Ga0224712_106555341 7Ga0256611_12380912 8Ga0247646_12890131 9Ga0247618_11689291 10Ga0247618_11813401 11Ga0210288_11291931 12Ga0210288_11915951 13Ga0247626_12241341 14Ga0247630_11855061 15Ga0247651_103334601 16Ga0247634_102361781 17Ga0247634_103010261 18Ga0247634_104533921 19Ga0247634_104875451 20Ga0210250_103200632 21Ga0247636_103252392 22Ga0138306_10437302 23Ga0138299_104789982 24Ga0074034_105859592 25Ga0075383_106542602 26Ga0170824_1170201581 27Ga0170818_1089640591 28Ga0326787_063359_322_510
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1Ga0170824_1173144051 2Ga0068831_1121741 3Ga0157370_111201522 4Ga0157372_133879451 5Ga0224712_106555341 6Ga0256611_10168241 7Ga0256611_12380912 8Ga0256766_1435293 9Ga0247646_12890131 10Ga0247631_11380381 11Ga0247618_11031271 12Ga0247618_11689291 13Ga0247618_11813401 14Ga0210272_11170702 15Ga0210272_12817971 16Ga0210288_11291931 17Ga0210288_11915951 18Ga0247633_102727941 19Ga0247626_11785591 20Ga0247626_12243871 21Ga0247630_11855061 22Ga0247637_11380661 23Ga0247615_102276841 24Ga0247615_103360362 25Ga0247651_103334601 26Ga0247634_100594931 27Ga0247634_102117342 28Ga0247634_102361781 29Ga0247634_103005461 30Ga0247634_103010261 31Ga0247634_104533921 32Ga0247634_104875451 33Ga0247613_102409412 34Ga0247613_102450482 35Ga0247613_103198243 36Ga0247613_104155213 37Ga0247613_104482161 38Ga0247623_103357331 39Ga0247636_103252392 40Ga0247636_103332041 41Ga0247627_100467462 42Ga0247627_102932411 43Ga0247627_103342901 44Ga0138300_10770092 45Ga0138296_17858581 46Ga0138306_10437302 47Ga0138299_102048002 48Ga0138299_103925771 49Ga0138299_104537261 50Ga0074034_105859592 51Ga0138297_17039962 52Ga0075383_106542602 53Ga0170834_1022319101 54Ga0170824_1055476361 55Ga0170824_1118977651 56Ga0170824_1170201581 57Ga0102761_122769331 58Ga0170818_1030985881 59Ga0170818_1095487372 60Ga0315741_119875351 61Ga0314755_11779602 62Ga0326787_063359_322_510 63Ga0326776_029404_301_489
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.37% β-sheet: 7.37% Coil/Unstructured: 85.26%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300030607\|Ga0247615_10364730	Not Available	528	Open in IMG/M
3300030609\|Ga0247634_10236178	Not Available	689	Open in IMG/M
3300030635\|Ga0247627_10188949	Not Available	625	Open in IMG/M
3300030635\|Ga0247627_10293241	Not Available	541	Open in IMG/M
3300030938\|Ga0138299_10459035	Not Available	528	Open in IMG/M
3300031231\|Ga0170824_127561088	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	1.89%
Environmental	Environmental	92.45%
Host-Associated	Host-Associated	5.66%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	5.66%
Terrestrial	Environmental → Terrestrial	92.45%
Wastewater	Engineered → Wastewater	1.89%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.89%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil	92.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.45%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	87.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Enriched Soil Aggregate	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Enriched Soil Aggregate	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	16.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	71.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	2.83%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005629	Enriched soil aggregate microbial communities from Iowa State university to study microbial drivers of carbon cycling - Hofmockel_1000060-3 ISU MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009411	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023200	Activated sludge enriched bacterial communities from WWTP in Fort Collins, Colorado, USA ? LHP	Engineered	Open in IMG/M
3300026393	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0917-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030537	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030546	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Showing 1 to 10 of 55 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068831_1121741	3300005629	Enriched Soil Aggregate	ENSDMFVNQRVRVLDARKLAAHGLLGQTWRAATYNNPVKYVQGAVDDYVIRDKNIFGDNFMYNQFN*
Ga0115017_12086341	3300009411	Soil	SDNFVNQRVRVLDARGLRSHGLLGQTWRDTTYPNTIKYIAGVVDDYVIRDNDIFGDNFVYNTFN*
Ga0115017_12484231	3300009411	Soil	QRVRVLDARKLRSHGLLGQTWRETTYPNAIKYIQGQVDDYVIRDNDIFGDNFVFNTFN*
Ga0150985_1137509041	3300012212	Avena Fatua Rhizosphere	SKLKSHGLLGQTWRQTTYAGPIKHIQGRVDDYVIRDGDVFGDDFVFNVFN*
Ga0157370_111201522	3300013104	Corn Rhizosphere	WDFAFENSDMFVNQRVRVLDSRSLRSHGLLGQTWREATYPNAIKFIQGTVDDYVIRDNDIFGDNFVFNSFN*
Ga0157372_133879451	3300013307	Corn Rhizosphere	VNQKVKVGDSRNLRSHGLLGQTWRDKTYPNAIKYIQGEPDDYVIREGDVFGDNFIYNAFN
Ga0224712_106555341	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	INQRVRVANARSLRSHGLLGQTWRDATYPTALKYVQGSVDDYVVRDGDLFGDSFVYNAFN
Ga0256611_10168241	3300023200	Activated Sludge	QVRVFDSRGLRSHGLLGQTWRQTTYPNAIKHVQGEVDDYVIREGDVFGDSFVYNAFN
Ga0256611_12380912	3300023200	Activated Sludge	MYLNQKVHVSDKRSLRSHGLLGQTWRKATYPNAIKHVQGVVDDYVIREADVFGDSFVYNAFN
Ga0256766_1435293	3300026393	Enriched Soil Aggregate	GVWEFMFENSDMFINQRVKVNDARQLRSHGLLGQTWKEQTYPNPIKYIQGAVDDYVIRDGDLFGDNFVYNAFN
Ga0247642_10511311	3300030537	Soil	YVNQKVRVFDSRGLRSHGLLGQTWRDTTYPNAIKYIQGSVDDYVIRDGDIFGDNFVFNTY
Ga0247646_12890131	3300030546	Soil	GNWQIVYENSDMYVNQNVRVTDAQKLKSHGLLGQTWRAKTYPNAVKHIQGSVDDYVIRDKDIFGDNFVYNMFN
Ga0247631_11380381	3300030550	Soil	RWLFDFENSDMFVNQRVRVLDVAGLRSHGMLGQTWREITYPTSLKYIQGTVDDYVIRNGDIFGDDFVYNTFN
Ga0247618_11031271	3300030555	Soil	DMFINQRVKVLDARGLRSHGLLGQTWRDTTYPNAIKYIAGQVDDYVIRDNDIFGDNFVFNTHN
Ga0247618_11689291	3300030555	Soil	VRVLDSRKLRSHGMLGQTWREATYPNSVKYIQGEVDDYVIRDNDIFGDNFVYNTFN
Ga0247618_11813401	3300030555	Soil	QRVRVSTPVDRLRSHGLLGQTWRQTTYPNAIKFIQGAVDDYVIRDGEIFGDEFVYNNFN
Ga0247618_11819021	3300030555	Soil	FENSDMFVNQRVRVLDARGLRSHGLLGQTWRETTYPNSIKYIAGQVDDYVIRDGDIFGDNFVFNTFN
Ga0247653_10230201	3300030563	Soil	LDVSGLRSHGMLGQTWKEITYPTALKYIQGTVDDYVIRDGDIFGDDFVYNTFN
Ga0247652_12037781	3300030571	Soil	DMFVNQRVRVLDARGLRSHGLLGHTWRETTYPNSIKFVQGQVDDYVIRDGDIFGDNFLFNAHN
Ga0210272_11170702	3300030573	Soil	LGFCFFENSDMFVNQRVRVLDSSRLKSHGLLGQTWRETTYPNSIKYIQGSVDDYVIRDDNDIFGDNFVYNQYN
Ga0210272_12817971	3300030573	Soil	QIGNWDFAFENSDMFINQRVRVLDSRTLRSHGLLGQTWRETTYPNSIKYIQGIVDDYVVKDNDIFGDNFVFNTYN
Ga0210288_11291931	3300030575	Soil	IGNWDFVFENSDMFLNQRVRVTSATKLRSHGLLGQTWRDTTYPNPIKYIQGTVDDYVIRSGGIFGDEFLYNAHN
Ga0210288_11915951	3300030575	Soil	SDMYVNQKVRVLEINKLRSHGLLGQTWRSTTYPASALKHVQGSVDDYVIRSGDIFGDDFVYNVHN
Ga0210260_103819492	3300030577	Soil	MFINQRVRVLDSRTLRSHGLLGQTWRETTYPNSIKYIQGIVDDYVVKDNDIFGDNFVFNTYN
Ga0247633_102727941	3300030579	Soil	RVRVLNSRNLRSHGLLGQTWRETTYPNPIKYIAGQVDDYVIRDNDIFGDNFVFNTFN
Ga0247643_11990001	3300030590	Soil	SDMFVNQRVRVLDSRNLRSHGLLGQTWRETTYSNTIKYIQGQVDDYVIRDNDIFGDNFVYNTFN
Ga0247626_11785591	3300030591	Soil	FENSDKFVNQRVRVLDARGLRSHGLLGQTWREATYPNAIKYVQGKVDDYVIRDGDIFGDEFVFNNFN
Ga0247626_12241341	3300030591	Soil	VNQRVRVTDVSGLRSHGMLGQTWREITYPTSLKYIAGAVDDYVIRNGDIFGDDFVYNTFN
Ga0247626_12243871	3300030591	Soil	FVNQRVRVLDSRNLRSHGLLGQTWRETTYPNAIKYIAGSVDDYVIRDNDIFGDAFVFNAH
Ga0247630_10997341	3300030599	Soil	FVNQRVRVLDARALRSHGLLGQTWRETTYPNAIKYIAGQVDDYVIRDNDIFGDNFVFNNF
Ga0247630_11855061	3300030599	Soil	FINQKVAVSDARKLRSHGLLGQTWRETTYPNAIKYVQGQVDDYVVQDNDIFGDNFVFNTF
Ga0247630_12203111	3300030599	Soil	WDFAFENSDKFVNQRVRVLDARRLRSHGLLGQTWRENTYPNSIKYIQGQVDDYVIRDNDIFGDNFVFNTFN
Ga0247637_11380661	3300030604	Soil	AFENSDMFVNQRVRVLDARSLRSHGLLGQTWRQTTYANAIKHVAGQVDDYVIRDGDIFGDNFVNNTHN
Ga0247615_102276841	3300030607	Soil	LFVNQRVKVLDSKGLRSHGLLGQTWRDQTYPNAVKHIQGHVDDYVIREGEIFGDSFVYNTFN
Ga0247615_103360362	3300030607	Soil	AFENSDMFVNQRVRVLDARKLRSHGLLGQTWRETTYPNAVKYVEGAVDDYVIRDAEIFGDNFVYNSFN
Ga0247615_103647301	3300030607	Soil	SVQVGNWDFAFENSDMFVNQRVRVLDARKLRSHGLLGQTWREATYPNAIKHIQGQVDDYVIRDADIFGDNFVYNTFN
Ga0247651_103334601	3300030608	Soil	IDSHGELRSHGLLGQTWRETTYPNPIKYVQGHVDDYVIRDGDIFGDNFVFNNHN
Ga0247634_100594931	3300030609	Soil	MYVNQKVRVLDSRGMRSHGLLGQTWRDTTYPNAIKYIQGSVDDYVIRDNDIFGDNFVFNTYN
Ga0247634_101341911	3300030609	Soil	MTIGNWDFAFENSDMFVNQRVKVLDARKLRSHGLLGQTWRDVTYPNAIKYIQGQVDDYVIRDNDIFGDNFVYNTFN
Ga0247634_102117342	3300030609	Soil	FENSDMFVNQRVRVLDARGLRSHGLLGQTWSQKTYPNALKYVQGAVDDYVIRDGDIFGDTFVFNQFN
Ga0247634_102361781	3300030609	Soil	VQIGNWDFAFENSDMFINQRVRVLDARGLRAHGLLGQTWASKTYPTALKYVQGQVDDYVIREGDIFGDNFVYNQFN
Ga0247634_103005461	3300030609	Soil	VQIGNWDFSFENSDRFVNQRVRVLDARGLRSHGLLGQTWRSQTYPNAIKYVQGGVDDYVIRDNDLFGDAFVYNQFN
Ga0247634_103010261	3300030609	Soil	ARKLRSHGLLGQTWRETVYPNAIKYIQGAVDDYVIRDGDLFGSNFLYNMHD
Ga0247634_103819021	3300030609	Soil	WDFAFENSDMYVNQRVRVLDARKLRSHGLLGQTWRETTYPNAIKYIQGEVDDYVIRDADIFGDNFVYNTFN
Ga0247634_104007242	3300030609	Soil	FINQRVRVLDSRRLRSHGLLGQTWRETTYPNTLKHVQGDVDDYVIRDGDIFGDNFVYNTF
Ga0247634_104533921	3300030609	Soil	VLDARGLRSHGLLGQTWSQKTYPGPLKYVQGAADDYVIRDDNLFGDAFVFNQFN
Ga0247634_104875451	3300030609	Soil	VTDAQKLRSHGLLGQTWRTKTYPNTIKHIQGSVDDYVIREQDIFGDNFVYNMFN
Ga0247634_105325741	3300030609	Soil	RQLRSHGLLGQTWREVTYPNTIKYIQGSVDDYVIRDGQIFGDDFLYNAHN
Ga0247613_102409412	3300030610	Soil	NSDLFLNQRVRVMDARGLRSHGLLGQTWRDTVYPNQVKYVAGEVDDYVIRENDVFGDNFVFNVFN
Ga0247613_102450482	3300030610	Soil	AFENSDMFINQRVRVLDSRRLRSHGLLGQTWRETTYPNTLKHVQGDVDDYVIRDGDIFGDNFVYNTFN
Ga0247613_103198243	3300030610	Soil	DMFVNQRVKVLDARGLRSHGLLGQTWRETTYPNPIKYIQGVVDDYAIRNKDIYGDDFVYNTFN
Ga0247613_103486751	3300030610	Soil	WDFAFENSDMFVNQRVRVLDARGLRSHGLLGQTWRETTYPNAIKYIQGQVDDYVIRDGEIFGDNFVVNTFN
Ga0247613_104155213	3300030610	Soil	DMFVNQRVKVIDVDGLRSHGMLGQTWREITYPTALKFIQGSVDDYVIRDGDIFGDDFVYNTFN
Ga0247613_104482161	3300030610	Soil	FENSDLFVNQRVRVLDARGLRSHGLLGQTWREATYPNAIKYIQGTVDDYVIRENDIFGDNFVFNTHN
Ga0247613_104678532	3300030610	Soil	GNWDFAFENSDMFVNQRVRVLDARSLRAHGLLGQTWRETTYPNTIKYVQGQVDDYVIRDNDIFGDNFVFNTFN
Ga0247629_102823702	3300030628	Soil	DFENSDMFVNQRVRVLDVSGLRSHGMLGQTWKEITYPTALKYIQGTVDDYVIRDGDIFGDDFVYNTFN
Ga0210250_103200632	3300030632	Soil	VFKLEIGNLVFENSDMFVNQRVRVLDSSRLKSHGLLGQTWRETTYPNSIKYIQGSVDDYVIRDDNDIFGDNFVYNQYN
Ga0247623_102123601	3300030633	Soil	VRVLDARQLRSHGLLGQTWREVTYPNAIKHIQGSVDDYVIRDGQIFGDDFLYNAHN
Ga0247623_103132651	3300030633	Soil	FAFENSDKYVNQRVRVLDARGLRSHGLLGQTWRETTYPNSIKYIAGQVDDYVIRDGDIFGDNFVFNTFN
Ga0247623_103357331	3300030633	Soil	AVADARNLRSHGLLGQTWRDTTYPNAIKFVQGQVDDYVIRDGDIFGDTFVFNQFN
Ga0247636_103252392	3300030634	Soil	QFDFENSDMFINQRVKVENSGKLKSHGLLGQTWKQTTYNNAVKHIQGQVDDYVIRSGDVFGDEFVFNTFN
Ga0247636_103332041	3300030634	Soil	VRVRDARTLRSHGLLGQTWRETTYPNTIKYVQGQVDDYVIRDNDIFGDNFVFNTFN
Ga0247627_100467462	3300030635	Soil	MYLNQRVRVLDSRGLRSHGLLGQTWRDTTYPNAIKFIQGQVDDYVIRDRDLFGDNFVYNTFN
Ga0247627_101889492	3300030635	Soil	VQIGNWDFAFENSDKYVNQRVRVLDARGLRSHGLLGQTWRETTYPNSIKYIAGQVDDYVIRDGDIFGDNFVFNTFN
Ga0247627_102932411	3300030635	Soil	QIGNWDFEFENSDKFTNQKVRVIDAKQLRSHGLLGQTWRDVTYPNAIKYIQGSVDDYVIRDGQIFGDDFLYNSYN
Ga0247627_103342901	3300030635	Soil	FAFENSDLFINQKVAVTDARNLRSHGLLGQTWRDTTYPNSIKYIQGQVDDYVIHDEDIFGDNFVFNTFN
Ga0247617_10210441	3300030684	Soil	GNWNFAFENSDMFINQRVRVLDSRRLRSHGLLGQTWRDVTYPNAIKYIQGQVDDYVIRDNDIFGDNFVYNTFN
Ga0138300_10770092	3300030922	Soil	VGQWSFAFENSDLFINQKVAVSDARNLRSHGLLGQTWRETTYPNAIKYIQGQVDDYVIREGEIFGDNFVFNTFN
Ga0138300_12831271	3300030922	Soil	MFVNQRVRVLDARGLRSHGLLGQTWRETTYPNAIKYIQGQVDDYVIRDGEIFGDNFVFNTFN
Ga0138296_13177071	3300030923	Soil	VLDARGLRSHGLLGQTWRETTYPNAIKFIQGQVDYYVIRDGDIFGDNFVFNTFN
Ga0138296_17858581	3300030923	Soil	RVLDSRGLRSHGLLGQTWREATYPNAVKYIQGQVDDYVIREADLFGDNFVFNTFN
Ga0138306_10437302	3300030936	Soil	VNQRVSVINPKELKSHGLLGQTHREKVYPNSIKFIQGSVDDYVIREKDLFGDSFVYNMFN
Ga0138299_102048002	3300030938	Soil	VFENSDLFVNQKVRVLDSRSLRSHGLLGQTWREATYPNAVKYIAGSVDDYVIRDNDIFGDAFLYNTFN
Ga0138299_103925771	3300030938	Soil	EFAFENSDMFVNQRVRVLDARSLRSHGLLGQTWRETTYPNTIKYVQGQVDDYVIRDGDIFGDAFVFNAHN
Ga0138299_104537261	3300030938	Soil	VKVLDSRSLRSHGLLGQTWRDTVYPNAIKHIQGAVDDYVIRDQDIFGDNFVYNTFN
Ga0138299_104590352	3300030938	Soil	GNWDFTFENSDMFVNQKVRVLDSRNLRSHGLLGQTWRETTYPNAVKYIAGSVDDYVIRDNDIFGDAFVFNAFN
Ga0138299_104789982	3300030938	Soil	SLRSHGLLGQTWRETTYPNAVKYIAGSVDDYVIRDNDIFGDAFVFNAFN
Ga0138303_13033291	3300030939	Soil	GNWDFVFENSDMFVNQRVRVLDSRGLRSHGLLGQTWRETTYPNAIKYIAGQVDDYVIRENDIFGDNFVYNSFN
Ga0074034_105859592	3300030950	Soil	NSDKFVNQVVRIRDAHSIAAHGLLGQTWREQTYPNAIKYIQGQVDDYAIRDKDIFGDNFLYNAFN
Ga0138297_17039962	3300030962	Soil	RVLDARGLRAHGLLGQTWREKTYANTLKYVQGSVDDYVIRDDSIFGDNFVFNQFN
Ga0075383_106542602	3300030966	Soil	DRYVNQQVRVSSSSGLRSHGLLGQTWKDVVYSSPVKYVQGQVDDYVIREADLFGDNFVYNMFN
Ga0073995_121114901	3300031047	Soil	KFVNQRVRVLDARGLRSHGLLGQTWRDTTYPNSIKYIAGQVDDYVIRDGDIFGDNFVFNTFN
Ga0170834_1022319101	3300031057	Forest Soil	QRVRVIESRGLRSHGLLGQTWRETTYPNAVKYIQGRVDDYVIREGDIFGDNFVFNTFN
Ga0170822_166775322	3300031122	Forest Soil	VRVIESRGLRSHGLLGQTWRETTYPNAVKYIQGRVDDYVIREGDIFGDNFVFNTFN
Ga0170824_1055476361	3300031231	Forest Soil	IGNWDFAFENSDMFVNQRVRVTDARGLRSHGLLGQTWKEVTYPNSIKYIQGHVDDYVIREGDIFGDNFVFNKFD
Ga0170824_1118977651	3300031231	Forest Soil	FAFENSDKFVNQRVRVLKTAQLRSHGLLGQTWRDVTYPNAIKYIQGQVDDYVIRDGDIFGDDFMFNAFN
Ga0170824_1169169672	3300031231	Forest Soil	FVNQRVRVLDARGLRSHGLLGQTWREKTYPNSLKYVQGQVDDYVIRDGDIFGDNFVFNNF
Ga0170824_1170201581	3300031231	Forest Soil	LDARGLRSHGLLGQTWRDVTYPTALKYVQGSVDDYVIRDKDIFGDNFLYSKFA
Ga0170824_1173144051	3300031231	Forest Soil	FENSDMFVNQRVRVLDARGLRSHGLLGQTWRETTYPNAIKYIQGQVDDYVIRDGDIFGDNFVYNTFN
Ga0170824_1175679402	3300031231	Forest Soil	DARGLRSHGLLGQTWREATYPNSVKYIQGQVDDYVIRDNDIYGDNFVYNTFN
Ga0170824_1178606391	3300031231	Forest Soil	WDFAFENSDMFVNQRVRVLDARGLRSHGLLGQTWRETTYANAVKHIQGQVDDYVIRDGDIFGDNFVYNTFN
Ga0170824_1275610881	3300031231	Forest Soil	GNWDFAFENSDMFVNQRVRVLDARGLRSHGLLGQTWRETTYANTIKYIAGQVDDYVIRDNDIFGDNFVFNTFN
Ga0102761_118007941	3300031411	Soil	FVNQRVRVLDARGLRSHGLLGQTWRETTYPNAIKYIQGQVDDYAIADGDIFGDDFVYNQFKA
Ga0102761_122769331	3300031411	Soil	EFAFENSDKFVNQRVRVLKTAQLRSHGLLDQTWRDVTYPNAIKYIQGQVDDYVIRERDIFGDSFVYNMFN
Ga0170820_124858851	3300031446	Forest Soil	GLRSHGLLGQTWRENTYPNPIKYIQGSVDDYTIRGSDLFGDDFVYNVFN
Ga0170819_166545632	3300031469	Forest Soil	FGFENSDMFVNQRVRVSDARGLRSHGLLGQTWRETTYPNPIKYIQGAVDDYVIRDGDMFGDNFVFNVYN
Ga0170818_1030985881	3300031474	Forest Soil	ENSDMFVNQKVRVLDARQLRSHGLLGQTWREVTYDNAIKHIQGAVDDYVIRDNNIFGDDFLYNAHN
Ga0170818_1089640591	3300031474	Forest Soil	QRVRVTDARGLRSHGLLGQTWKEVTYPNSIKYIQGHVDDYVIREGDIFGDNFVFNKFD
Ga0170818_1095487372	3300031474	Forest Soil	VQIGVWDFGFENSDMFVNQRVRVSDARGLRSHGLLGQTWRETTYPNPIKYIQGAVDDYVIRDGDMFGDNFVFNVYN
Ga0214501_11383451	3300032625	Switchgrass Phyllosphere	QRVRVLDARSLRSHGLLGQTWRETTYPNAIKYVQGQVDDYAIRDGDIFGDNFVFNNHN
Ga0315741_119875351	3300032739	Forest Soil	FVNQRVRVLDSRGLRSHGLLGQTWRDTTYANAVKHVQGQVDDYVIRDGDIFGDNFVYNTF
Ga0315742_116582341	3300032756	Forest Soil	NSDKFVNQVVRIRDAHSIAAHGLLGQTWREQTYPNAIKYIQGQVDDYAIRDQDIFGDNFLYNAFN
Ga0314768_11877811	3300033523	Switchgrass Phyllosphere	QRVRVLDARSLRSHGLLGQTWRETTYPNAIKYVQGQVDDYVIRDGDIFGDNFVFNNHN
Ga0314755_11779602	3300033538	Switchgrass Phyllosphere	DFAFENSDMFVNQRVRVLDARKLASHGLLGQTWRTATYPNAVKYIQGAVDDYVVREKDIFGDNFLYNQFN
Ga0326787_063359_322_510	3300034363	Soil	MFINQKVRVTNARQLRSHGLLGQTWRDTTYPNSIKYVQGSVDDYQISDNDLFGDDFSYNTFN
Ga0326776_029404_301_489	3300034395	Soil	MFINQRVRVASPSSLRSHGLLGQTWRDATYPNAVRHIQGVVDDYVIREGDVFGDNFVYNIFN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093130

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences