Metagenome / Metatranscriptome Family F092108

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092108
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	74 residues
Representative Sequence	MGILKISAKCSDLCWTEYTDGKGNKTESDSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDTQVINAQKKA
Number of Associated Samples	70
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	28.97 %
% of genes from short scaffolds (< 2000 bps)	67.29 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.140 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake (14.953 % of family members)
Environment Ontology (ENVO)	Unclassified (24.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.318 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.80% β-sheet: 28.43% Coil/Unstructured: 61.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with PDB biological assemblies

PDB ID	Structure Name	Biol. Assembly	TM-score
5ebe	STRUCTURE OF HUMAN SPHINGOMYELINASE PHOSPHODIESTERASE LIKE 3A (SMPDL3A) WITH 5' CMP	1	0.51392
5ebe	STRUCTURE OF HUMAN SPHINGOMYELINASE PHOSPHODIESTERASE LIKE 3A (SMPDL3A) WITH 5' CMP	3	0.51345
5ebe	STRUCTURE OF HUMAN SPHINGOMYELINASE PHOSPHODIESTERASE LIKE 3A (SMPDL3A) WITH 5' CMP	2	0.51214
5ebb	STRUCTURE OF HUMAN SPHINGOMYELINASE PHOSPHODIESTERASE LIKE 3A (SMPDL3A) WITH ZN2+	1	0.51054

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08281	Sigma70_r4_2	3.74
PF06067	DUF932	2.80
PF00583	Acetyltransf_1	1.87
PF02945	Endonuclease_7	1.87
PF00118	Cpn60_TCP1	0.93
PF00145	DNA_methylase	0.93
PF13392	HNH_3	0.93
PF13489	Methyltransf_23	0.93
PF14352	DUF4402	0.93
PF04002	RadC	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.93
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
All Organisms	root	All Organisms	44.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Viruses	superkingdom	All Organisms → Viruses	28.97 %
cellular organisms	root	All Organisms → cellular organisms	15.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.95 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.80 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.93 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.80 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	1.87 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.93 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.93 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.80 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.87 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.93 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.87 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.93 %
unclassified Campylobacterota	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.87 %
Epsilonproteobacteria bacterium JGI 0002006-B18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota → Epsilonproteobacteria bacterium JGI 0002006-B18	0.93 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.93 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.93 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.87 %
unclassified Cytophagales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales	0.93 %
unclassified Acinetobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter	0.93 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.93 %
Epsilonproteobacteria bacterium JGI 0002006-B18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota → Epsilonproteobacteria bacterium JGI 0002006-B18	0.93 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.04 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.87 %
Cytophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	0.93 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.93 %
Acinetobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter → Acinetobacter sp.	0.93 %
Epsilonproteobacteria bacterium JGI 0002006-B18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota → Epsilonproteobacteria bacterium JGI 0002006-B18	0.93 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000230\|TB_GS10_10DRAFT_10001356	Not Available	14377	Open in IMG/M
3300001533\|MLSed_10036598	All Organisms → Viruses → Predicted Viral	2882	Open in IMG/M
3300001765\|MIS_1001013	Not Available	91901	Open in IMG/M
3300002026\|MIS_10029777	Not Available	5486	Open in IMG/M
3300002027\|MIS_10000632	All Organisms → Viruses → Predicted Viral	4925	Open in IMG/M
3300002027\|MIS_10026874	All Organisms → Viruses → Predicted Viral	3348	Open in IMG/M
3300002538\|JGI24132J36420_10000587	All Organisms → cellular organisms → Bacteria	17709	Open in IMG/M
3300005915\|Ga0075122_10161908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → unclassified Campylobacterota → Epsilonproteobacteria bacterium JGI 0002006-B18	813	Open in IMG/M
3300005917\|Ga0075115_10119440	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005918\|Ga0075116_10009718	All Organisms → Viruses → Predicted Viral	4262	Open in IMG/M
3300005918\|Ga0075116_10068939	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300005918\|Ga0075116_10079264	All Organisms → Viruses → Predicted Viral	1318	Open in IMG/M
3300005918\|Ga0075116_10117707	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300005935\|Ga0075125_10048429	All Organisms → Viruses → Predicted Viral	1909	Open in IMG/M
3300005935\|Ga0075125_10171249	Not Available	905	Open in IMG/M
3300005935\|Ga0075125_10177070	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	886	Open in IMG/M
3300005935\|Ga0075125_10334714	Not Available	593	Open in IMG/M
3300005939\|Ga0075123_10188082	Not Available	775	Open in IMG/M
3300005939\|Ga0075123_10326629	Not Available	562	Open in IMG/M
3300006395\|Ga0079066_1530782	All Organisms → Viruses → Predicted Viral	1116	Open in IMG/M
3300006398\|Ga0079067_1568103	All Organisms → Viruses → Predicted Viral	1367	Open in IMG/M
3300008470\|Ga0115371_10217419	Not Available	2263	Open in IMG/M
3300008470\|Ga0115371_10318044	Not Available	579	Open in IMG/M
3300008470\|Ga0115371_10939730	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	866	Open in IMG/M
3300008470\|Ga0115371_11018203	Not Available	2389	Open in IMG/M
3300008470\|Ga0115371_11239983	Not Available	655	Open in IMG/M
3300009009\|Ga0105105_10725499	Not Available	593	Open in IMG/M
3300009081\|Ga0105098_10051622	All Organisms → Viruses → Predicted Viral	1678	Open in IMG/M
3300009149\|Ga0114918_10050274	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2805	Open in IMG/M
3300009149\|Ga0114918_10630589	Not Available	565	Open in IMG/M
3300009165\|Ga0105102_10832000	Not Available	528	Open in IMG/M
3300009169\|Ga0105097_10162444	All Organisms → Viruses → Predicted Viral	1229	Open in IMG/M
3300009669\|Ga0116148_1173291	Not Available	962	Open in IMG/M
3300009783\|Ga0116158_10409283	Not Available	732	Open in IMG/M
3300010233\|Ga0136235_1048855	Not Available	854	Open in IMG/M
3300010353\|Ga0116236_11241716	Not Available	573	Open in IMG/M
3300011118\|Ga0114922_10104518	All Organisms → Viruses → Predicted Viral	2423	Open in IMG/M
3300011118\|Ga0114922_10250769	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1484	Open in IMG/M
3300012881\|Ga0079063_1349387	Not Available	672	Open in IMG/M
3300014498\|Ga0182019_10018910	All Organisms → Viruses → Predicted Viral	3732	Open in IMG/M
3300017963\|Ga0180437_10415696	Not Available	1002	Open in IMG/M
3300017971\|Ga0180438_10697388	Not Available	746	Open in IMG/M
3300019215\|Ga0179945_1091064	Not Available	601	Open in IMG/M
3300020048\|Ga0207193_1002875	Not Available	29559	Open in IMG/M
3300020048\|Ga0207193_1008074	Not Available	15488	Open in IMG/M
3300020048\|Ga0207193_1024478	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	7329	Open in IMG/M
3300022874\|Ga0222685_1005357	All Organisms → Viruses → Predicted Viral	2929	Open in IMG/M
3300022874\|Ga0222685_1006733	All Organisms → Viruses → Predicted Viral	2570	Open in IMG/M
3300022874\|Ga0222685_1006799	All Organisms → Viruses → Predicted Viral	2556	Open in IMG/M
3300022874\|Ga0222685_1012347	Not Available	1807	Open in IMG/M
3300022884\|Ga0222701_1030860	Not Available	962	Open in IMG/M
3300022884\|Ga0222701_1091685	Not Available	504	Open in IMG/M
3300022887\|Ga0222642_1018250	All Organisms → Viruses → Predicted Viral	1533	Open in IMG/M
3300023256\|Ga0222703_1002879	All Organisms → Viruses → Predicted Viral	3841	Open in IMG/M
3300023256\|Ga0222703_1085112	Not Available	563	Open in IMG/M
3300023299\|Ga0222702_1071668	Not Available	698	Open in IMG/M
3300024262\|Ga0210003_1189751	Not Available	850	Open in IMG/M
3300025661\|Ga0208905_1011126	All Organisms → Viruses → Predicted Viral	3647	Open in IMG/M
3300025697\|Ga0208769_1046485	All Organisms → Viruses → Predicted Viral	1382	Open in IMG/M
3300025697\|Ga0208769_1116257	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300025698\|Ga0208771_1152104	Not Available	635	Open in IMG/M
3300025736\|Ga0207997_1041001	All Organisms → Viruses → Predicted Viral	1742	Open in IMG/M
3300025736\|Ga0207997_1258237	Not Available	504	Open in IMG/M
3300025836\|Ga0209748_1139154	Not Available	892	Open in IMG/M
3300025888\|Ga0209540_10342460	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300027693\|Ga0209704_1174495	Not Available	625	Open in IMG/M
3300027721\|Ga0209492_1059700	Not Available	1347	Open in IMG/M
3300027721\|Ga0209492_1112713	Not Available	955	Open in IMG/M
3300027887\|Ga0208980_10021049	All Organisms → Viruses → Predicted Viral	3800	Open in IMG/M
3300027896\|Ga0209777_10449163	Not Available	960	Open in IMG/M
3300027899\|Ga0209668_10106967	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300028734\|Ga0302206_1000083	Not Available	39539	Open in IMG/M
3300028738\|Ga0302292_1001832	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13240	Open in IMG/M
3300028738\|Ga0302292_1108872	Not Available	979	Open in IMG/M
3300031227\|Ga0307928_10092300	Not Available	1797	Open in IMG/M
3300031339\|Ga0307932_1062639	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	995	Open in IMG/M
3300031539\|Ga0307380_10048509	All Organisms → Viruses → Predicted Viral	4702	Open in IMG/M
3300031565\|Ga0307379_10118632	All Organisms → Viruses → Predicted Viral	2835	Open in IMG/M
3300031565\|Ga0307379_10757743	Not Available	862	Open in IMG/M
3300031578\|Ga0307376_10016753	Not Available	5883	Open in IMG/M
3300031601\|Ga0307992_1016771	All Organisms → Viruses → Predicted Viral	3454	Open in IMG/M
3300031601\|Ga0307992_1144006	Not Available	927	Open in IMG/M
3300031601\|Ga0307992_1279109	Not Available	588	Open in IMG/M
3300031601\|Ga0307992_1281288	Not Available	585	Open in IMG/M
3300031601\|Ga0307992_1298828	Not Available	560	Open in IMG/M
3300031645\|Ga0307990_1011280	Not Available	5761	Open in IMG/M
3300031657\|Ga0307991_1057193	All Organisms → Viruses → Predicted Viral	1521	Open in IMG/M
3300031669\|Ga0307375_10153262	Not Available	1592	Open in IMG/M
3300031669\|Ga0307375_10877193	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031746\|Ga0315293_10460121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter → Acinetobacter sp.	990	Open in IMG/M
3300031746\|Ga0315293_10979113	Not Available	604	Open in IMG/M
3300031772\|Ga0315288_11406426	Not Available	584	Open in IMG/M
3300031952\|Ga0315294_11355940	Not Available	566	Open in IMG/M
3300032046\|Ga0315289_10042527	Not Available	5768	Open in IMG/M
3300032046\|Ga0315289_10280407	All Organisms → Viruses → Predicted Viral	1742	Open in IMG/M
3300032053\|Ga0315284_10059150	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5243	Open in IMG/M
3300032053\|Ga0315284_10817711	Not Available	1076	Open in IMG/M
3300032053\|Ga0315284_12256195	Not Available	540	Open in IMG/M
3300032053\|Ga0315284_12304342	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300032118\|Ga0315277_10209041	All Organisms → Viruses → Predicted Viral	2117	Open in IMG/M
3300032156\|Ga0315295_11632321	Not Available	617	Open in IMG/M
3300032275\|Ga0315270_10105299	All Organisms → Viruses → Predicted Viral	1656	Open in IMG/M
3300032275\|Ga0315270_10184364	All Organisms → Viruses → Predicted Viral	1273	Open in IMG/M
3300033420\|Ga0316608_1002039	Not Available	7736	Open in IMG/M
3300033494\|Ga0316612_1000598	Not Available	10405	Open in IMG/M
3300033821\|Ga0334818_002142	Not Available	2389	Open in IMG/M
3300033825\|Ga0334843_040540	Not Available	645	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Engineered	Engineered	6.54%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	79.44%
Terrestrial	Environmental → Terrestrial	14.02%
Wastewater	Engineered → Wastewater	6.54%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	32.71%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	29.91%
Marine	Environmental → Aquatic → Marine	12.15%
Soil	Environmental → Terrestrial → Soil	9.35%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	6.54%
Sediment	Environmental → Aquatic → Sediment	4.67%
Peat	Environmental → Terrestrial → Peat	4.67%

Habitat	Taxonomy	Distribution
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	28.04%
Lake	Environmental → Aquatic → Freshwater → Lake	17.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.54%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.54%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	6.54%
Clay	Environmental → Terrestrial → Soil → Clay	5.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	4.67%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.87%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.87%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	28.04%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	17.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.54%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	6.54%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	5.61%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.87%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.93%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%

Habitat	Taxonomy	Distribution
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	14.95%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.08%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	11.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.54%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.54%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	6.54%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	5.61%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	4.67%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	4.67%
Sinkhole Freshwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Sinkhole Freshwater	3.74%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	2.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.87%
Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Sediment → Microbial Mat	1.87%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.93%
Benthic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic	0.93%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.93%
Lake Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water	0.93%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000230	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- GS10_10	Environmental	Open in IMG/M
3300001533	Benthic freshwater microbial communities from British Columbia, Canada	Environmental	Open in IMG/M
3300001765	Sinkhole freshwater microbial communities from Lake Huron, USA - combined 2007-2012	Environmental	Open in IMG/M
3300002026	Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 5k+	Environmental	Open in IMG/M
3300002027	Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 1.5k-5k	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300005915	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKB	Environmental	Open in IMG/M
3300005917	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKH	Environmental	Open in IMG/M
3300005918	Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKC	Environmental	Open in IMG/M
3300005935	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN	Environmental	Open in IMG/M
3300005939	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKX	Environmental	Open in IMG/M
3300006395	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006398	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300008470	Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009783	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC052_MetaG	Engineered	Open in IMG/M
3300010233	Filterable freshwater microbial communities from Conwy River, North Wales, UK. Fraction, filtered through 0.2 um filter. After WGA.	Environmental	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012881	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300019215	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_STIC12_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300022874	Saline water microbial communities from Ace Lake, Antarctica - #1077	Environmental	Open in IMG/M
3300022884	Saline water microbial communities from Ace Lake, Antarctica - #1502	Environmental	Open in IMG/M
3300022887	Saline water microbial communities from Ace Lake, Antarctica - #229	Environmental	Open in IMG/M
3300023256	Saline water microbial communities from Ace Lake, Antarctica - #1506	Environmental	Open in IMG/M
3300023299	Saline water microbial communities from Ace Lake, Antarctica - #1504	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300025661	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKS (SPAdes)	Environmental	Open in IMG/M
3300025697	Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKC (SPAdes)	Environmental	Open in IMG/M
3300025698	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKX (SPAdes)	Environmental	Open in IMG/M
3300025736	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300028734	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_1	Environmental	Open in IMG/M
3300028738	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_1	Environmental	Open in IMG/M
3300031227	Saline water microbial communities from Ace Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031339	Saline water microbial communities from Organic Lake, Antarctica - #48	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031601	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #133	Environmental	Open in IMG/M
3300031645	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031657	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #131	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033420	Microbial mat bacterial communities from Middle Island sinkhole, Lake Huron, Michigan, United States - MIS.2016.152B	Environmental	Open in IMG/M
3300033494	Microbial mat bacterial communities from Middle Island sinkhole, Lake Huron, Michigan, United States - MIS.2016.226	Environmental	Open in IMG/M
3300033821	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-X0	Environmental	Open in IMG/M
3300033825	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_GS10_10DRAFT_1000135626	3300000230	Groundwater	MGILSISVKCSDLCYTEYKDKNGNVTETDGYVPRKIGIGGGDYVNLEIDMETGQIQNWKPVTDEQVIASQKDLH*
MLSed_100365981	3300001533	Benthic	MGILSISAKCSDLCWTQYTDKNGNVTKSDSYVPQGIGIDEYGDYVALDIDMETGQIQNWKPVTDAQVIKAQKEA*
MIS_100101381	3300001765	Sinkhole Freshwater	MGILRISAKCSDLCWTEYTDAKGNKTESDGYVPEGIGISSDGDCGDYVSLDIDMQTGQIQNWKPVSDARVIKAQKSA*
MIS_100297779	3300002026	Sinkhole Freshwater	MGILRISAKCSDLCWTEYTDAKGKKTESDGYVPSDIGIDEYGDYVVLDIDMKTGQIQNWKPVSDARVIKAQKAS*
MIS_100006326	3300002027	Sinkhole Freshwater	MGILKISAKCSDLCWTQYTDKKGKVTESDSYVPEGIGISSEGDCGDYVSMDIDMETGQILNWKPVSDAQVIKAQKSA*
MIS_1002687410	3300002027	Sinkhole Freshwater	MNNVLRISVKCSDNCWTEYTDSKGNVTESDGYVPQGIGIDDDDSFGDYVVMDIDMKTGQILNWKPVTDAQIIKAQKK*
JGI24132J36420_1000058710	3300002538	Arctic Peat Soil	MGILKIIAKCSDLCFTEFTDSKGKVTGSDGYVPEDIGITESGDCGDYVVMEIDMKTGQIQNWKPVSDARVIKAQKKA*
Ga0075122_101619082	3300005915	Saline Lake	MGTLRINAKCSDLCWTGYTDSKGNETESDGYVPQNIGIGGGDYVELDIDMKTGQILNWEPISDAQVIQAQKKA*
Ga0075115_101194402	3300005917	Saline Lake	MGILKISAKCSDLCWTKYTDSKGNETESDSYVPEGIGIDDGGDYVDIDIDMKTGQILNWKPVSDTQVINAQKKA*
Ga0075116_100097182	3300005918	Saline Lake	MYVYHSITKHIETMGILSISAKCSDLCFTNYTDNNGNETETDGYVPYDIGIGGGDYVDLEIDMKTGQILNWKSVSDARVIKAQKESYD*
Ga0075116_100689391	3300005918	Saline Lake	MGILKISAKCSDLCWTEYTDGKGNKTESDSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDTQVINAQKKA*
Ga0075116_100792642	3300005918	Saline Lake	MGILKISAKCSDLCWTKYTDSKGNETESDSYVPEEIGIDDGGDYVDIDIDMKTGQIQNWKPVSDARVINAQKKA*
Ga0075116_101177072	3300005918	Saline Lake	MGTLRINAKCSDLCWTEYTDSKGSETESDSYVPENIGIGGGDYVEIDIDMKTGQILNWKPVSDTQVINAQKEA*
Ga0075125_100484292	3300005935	Saline Lake	MGILRISAKCSDLCWTKYTDSKGNETESDSYVPEEIGIDDGGDYVDIDIDMKTGQIQNWKPVSDARVINAQKKA*
Ga0075125_101712491	3300005935	Saline Lake	MGILTICAKCSDLCYTSFTGKDGKTTESDGYVPENIGIGDSYGDYVEMEIDTKTGQIQNWKPVSDTNVRAAQ
Ga0075125_101770701	3300005935	Saline Lake	KTMGTLRINAKCSDLCWTGYTDSKGNETESDGYVPQNIGIGGGDYVELDIDMKTGQILNWEPISDAQVIQAQKKA*
Ga0075125_103347141	3300005935	Saline Lake	MGILKISAKCSDLCWTEYTDGKGNKTESNSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDAQVINAQMKA*
Ga0075123_101880822	3300005939	Saline Lake	MGILTICAKCSDLCYTSFTGKDGKTTESDGYVPENIGIGDSYGDYVEMEIDTKTGQIQNWKPVSDTNVRAAQKKT*
Ga0075123_103266292	3300005939	Saline Lake	DLCWTEYTDSKGSETESDSYVPENIGIGGGDYVEIDIDMKTGQILNWKPVSDTQVINAQKEA*
Ga0079066_15307823	3300006395	Anaerobic Digestor Sludge	TKMGILRISAKCSDLCWTEYTDKNGKKTTSDSYVPEGIGISDPGDCGDYVSLAIDMQTGQILNWKPVSDKQVIEAQKKA*
Ga0079067_15681033	3300006398	Anaerobic Digestor Sludge	MGILRISAKCSDLCWTEYTDKNGKKTTSDSYVPEGIGISDPGDCGDYVSLAIDMQTGQILNWKPVSDKQVIEAQKKA*
Ga0115371_102174194	3300008470	Sediment	MGILRISAKCSDLCWTKYTDSKGNEIESNGYVPKGIGIDEYGDYVDIEIDMKTGQIQNWKPVSDAQVIDAQKKA*
Ga0115371_103180442	3300008470	Sediment	SDMCSTSYEDKNGETTESDSYVPEEIGIGGGDYIDIEIDMKTGQIQNWKPISDAKVIVAQKKA*
Ga0115371_109397301	3300008470	Sediment	MGILRINAKCSDLCWTEYTDSKGNETESDSYVPENIGIGGNDYVEIDINMKTGQILNWKPVSDTQVINAQKEA*
Ga0115371_110182031	3300008470	Sediment	MGNGILKISAKCSDLCWTEYTNNKGKKTETDGYVPHGIGIDEDGDSGDYVSMEIDMKTGQILNWKPVTDAQVIKAQKET*
Ga0115371_112399832	3300008470	Sediment	MGILKISAKCSDLCSTVFTDKKGRVTESNGYVPKEIGIDWYGDYVELEIDMITGQIQNWKSVCDTKVKKAQKGC*
Ga0105105_107254992	3300009009	Freshwater Sediment	MGILRISAKCSDLCWTEYTDKNGNKTESDSYVPEGIGIGDGCGDYVCMDIDMETGQILNWKPVSDAKVIKAQKE
Ga0105098_100516222	3300009081	Freshwater Sediment	MGILRISAKCSDLCWTEYTDKNGNKTESDSYVPEGIGIGDGCGDYVCMDIDMETGQILNWKPVSDAKVIKAQKEA*
Ga0114918_100502742	3300009149	Deep Subsurface	MGILSISAKCSDLCYTKFKDAKGNETESDSYVPDGIGISSEGDYGDYVSMDIDMKTGQILNWKPVSDAKVIAAQKKA*
Ga0114918_106305891	3300009149	Deep Subsurface	TMGILTMCAKCSDQCSLTFKDAKGNITEYDSYVPAGIGLGGDDDDGDYVEMEIDMKTGQILNWKSISDAKVIAAIKKTV*
Ga0105102_108320001	3300009165	Freshwater Sediment	AKCSDLCWTEYTDKNGNKTESDSYVPEGIGIGDGCGDYVCMDIDMETGQILNWKPVSDAKVIKAQKEA*
Ga0105097_101624442	3300009169	Freshwater Sediment	MGILRISAKCSDLCWTEYTDSKGNKTNSDSYVPEGIGITEDGDCGDYVSLEIDMKTGQILNWKPVSDAQVIKAQKEA*
Ga0116148_11732911	3300009669	Anaerobic Digestor Sludge	MGILRISAKCSDLCWTEYTDKNGKKTTSDSYVPEGIGISDPGDCGDYVSLAIDMQTGQILNWKP
Ga0116158_104092832	3300009783	Anaerobic Digestor Sludge	MGILRISAKCSDLCWTEYTDKNGKKTTSDSYVPEGIGISDPGDCGDYVSLAIDMQTGQILNWKPVSDKQVIDAQKKA*
Ga0136235_10488551	3300010233	Freshwater	NYHFQILFLSCSFTDSKGKVFESDSYVPDGIGIGDAYGDYVELEIDMSTGQILNWKPVSDAKVIAALKKA*
Ga0116236_112417161	3300010353	Anaerobic Digestor Sludge	MGILRISAKCSDLCWTEYTDKNGKKTTSDSYVPEGIGISDPGDCGDYVSLAIDMQTGQILNWKPV
Ga0114922_101045183	3300011118	Deep Subsurface	MGTLKISAKCSDLCWTEYTDKNGNKTESDSYVPEDIGISEDGDCGDYVSLEIDMKTGQILNWKPVSDTQVINAQKKA*
Ga0114922_102507693	3300011118	Deep Subsurface	MGTLKISAKCSDLCWTEYTDKNGQTTESDGYVPKNIGIDEYGDYVVLEIDMKTGQILNWKPVSDTRVIEAQKKS*
Ga0079063_13493871	3300012881	Anaerobic Digestor Sludge	RISAKCSDLCWTEYTDKNGKKTTSDSYVPEGIGISDPGDCGDYVSLAIDMQTGQILNWKPVSDKQVIEAQKKA*
Ga0182019_100189105	3300014498	Fen	MGILKISAKCSDLCSTIYTDKNGKVTESDGYVPSGIGIDEWGDYIVLDIDMKTGQIQNWKPVTDAQVIAAQKKA*
Ga0180437_104156961	3300017963	Hypersaline Lake Sediment	MGILKISAKCSDLCSTEFIDSKGKKTVSDGYVPQDIGIDWFGDYIELEIDMKTGQIQNWKPVSDARVIAAQKKA
Ga0180438_106973882	3300017971	Hypersaline Lake Sediment	MGILKISAKCSDLCSTEFIDSKGKKTVSDGYVQQDIGIDWFGDYIELEIDMKTGQIQNWKPVSDARVIAAQKKA
Ga0179945_10910642	3300019215	Anaerobic Digestor Sludge	MGILRISAKCSDLCWTEYTDKNGKKTTSDSYVPEGIGISDPGDCGDYVSLAIDMQTGQILNWKPVSDKQVIEAQKKA
Ga0207193_100287554	3300020048	Freshwater Lake Sediment	MRILSITAKCSDLCNTSFTDANGIEHESDSYVPEDIGIGGGDYVELEIDMETGQIQNWKPVSDAQIIKALKEV
Ga0207193_100807411	3300020048	Freshwater Lake Sediment	MGILRISAKCSDLCWTRFTDSNGNQTESDNYVPQGIGIDEEGDCGDYVSMQIDMQTGQILNWKPVTDAQVIEAQKNA
Ga0207193_102447810	3300020048	Freshwater Lake Sediment	MGILSITAKCSDLCNTFYTDAKKNEHTSDSYVPENIGIGGGDYIELEIDMETGQILDWKPVSDEVIIKAIKEA
Ga0222685_10053571	3300022874	Saline Water	MGTLRINAKCSDLCWTEYTDSKGSETESDSYVPENIGIGGGDYVEIDIDMKTGQILNWKPVSDTQVINAQKEA
Ga0222685_10067334	3300022874	Saline Water	MGILRISAKCSDLCWTKYTDSKGNETESDSYVPEEIGIDDGGDYVDIDIDMKTGQIQNWKPVSDARVINAQKKA
Ga0222685_10067997	3300022874	Saline Water	MGTLRINAKCSDLCWTGYTDSKGNETESDGYVPQNIGIGGGDYVELDIDMKTGQILNWEPISDAQVIQAQKKA
Ga0222685_10123471	3300022874	Saline Water	HIETMGILSISAKCSDLCFTNYTDNNGNETETDGYVPYDIGIGGGDYVDLEIDMKTGQILNWKSVSDARVIKAQKESYD
Ga0222701_10308601	3300022884	Saline Water	MYVYHSITKHIETMGILSISAKCSDLCFTNYTDNNGNETETDGYVPYDIGIGGGDYVDLEIDMKTGQILNWKSVSDARVIKAQKESYD
Ga0222701_10916851	3300022884	Saline Water	MGILTICAKCSDLCYTSFTGKDGKTTESDGYVPENIGIGDSYGDYVEMEIDTKTGQIQNWKPVSDTNVRAAQKKT
Ga0222642_10182506	3300022887	Saline Water	MGILKISAKCSDLCWTEYTDGKGNKTESDSYVPEGIGIDDGGDYVDIDIDMKTGQILNWKPVSDTQVINAQKKA
Ga0222703_10028797	3300023256	Saline Water	MGILKISAKCSDLCWTKYTDSKGNETESDSYVPEGIGIDDGGDYVDIDIDMKTGQILNWKPVSDTQVINAQKKA
Ga0222703_10851121	3300023256	Saline Water	KCSDLCYTSFTGKDGKTTESDGYVPENIGIGDSYGDYVEMEIDTKTGQIQNWKPLSDTNVRAAQKKT
Ga0222702_10716681	3300023299	Saline Water	MGILKISAKCSDLCWTKYTDSKGNETESDSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDAQVINAQMKA
Ga0210003_11897512	3300024262	Deep Subsurface	MGILSISAKCSDLCYTKFKDAKGNETESDSYVPDGIGISSEGDYGDYVSMDIDMKTGQILNWKPVSDAKVIAAQKKA
Ga0208905_10111264	3300025661	Lake Water	MGILKISAKCSDLCWTEYTDGKGNKTESNSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDAQVINAQMKA
Ga0208769_10464856	3300025697	Saline Lake	MGILKISAKCSDLCWTEYTDGKGNKTESDSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDTQVINAQKK
Ga0208769_11162573	3300025697	Saline Lake	MGILKISAKCSDLCWTKYTDSKGNETESDSYVPEEIGIDDGGDYVDIDIDMKTGQIQNWKPVSDARVI
Ga0208771_11521042	3300025698	Saline Lake	GILTICAKCSDLCYTSFTGKDGKTTESDGYVPENIGIGDSYGDYVEMEIDTKTGQIQNWKPVSDTNVRAAQKKT
Ga0207997_10410016	3300025736	Saline Lake	ISAKCSDLCWTKYTDSKGNETESDSYVPEEIGIDDGGDYVDIDIDMKTGQIQNWKPVSDARVINAQKKA
Ga0207997_12582371	3300025736	Saline Lake	MGILKISAKCSDLCWTEYTDGKGNKTESNSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDARVINAQKKA
Ga0209748_11391543	3300025836	Arctic Peat Soil	MGILKIIAKCSDLCFTEFTDSKGKVTGSDGYVPEDIGITESGDCGDYVVMEIDMKTGQIQNWKPVSDARVIKAQKKA
Ga0209540_103424601	3300025888	Arctic Peat Soil	ILKIIAKCSDLCFTEFTDSKGKVTGSDGYVPEDIGITESGDCGDYVVMEIDMKTGQIQNWKPVSDARVIKAQKKA
Ga0209704_11744951	3300027693	Freshwater Sediment	SAKCSDLCWTEYTDKNGNKTESDSYVPEGIGIGDGCGDYVCMDIDMETGQILNWKPVSDAKVIKAQKEA
Ga0209492_10597004	3300027721	Freshwater Sediment	MGILRISAKCSDLCWTEYTDKNGNKTESDSYVPEGIGIGDGCGDYVCMDIDMETGQILNWKPVSDAKVIKAQKEA
Ga0209492_11127131	3300027721	Freshwater Sediment	AKCSDLCWTEYTDSKGNKTNSDSYVPEGIGITEDGDCGDYVSLEIDMKTGQILNWKPVSDAQVIKAQKEA
Ga0208980_100210494	3300027887	Wetland	MGILKISAKCSDLCWTEYTDKNGKVTNSDSYVPEGIGISEEGDCGDYVSMEIDMVTGQILNWKPVTDAQVVKAQKEA
Ga0209777_104491633	3300027896	Freshwater Lake Sediment	MGILSISAKCSDCCYTSFKADNGKVTDSDGYVPKGIGIDEYGDYVVLEIDMQTGQILNWKPVSDAKVIKTQKGT
Ga0209668_101069671	3300027899	Freshwater Lake Sediment	MGILRISAKCSDLCWTEYTNAKGNKTESDGYVPSGIGIDEYGDYVVLNINMETGQIQNWKPI
Ga0302206_100008369	3300028734	Fen	MRLLKLCAKCSDLCGISFQNGTGKIHESDGYVPENINIGGGDYVELDIDMETGQIQNWKPVTDAAIILSIKTA
Ga0302292_100183219	3300028738	Fen	MGILKISAKCSDLCSTSFTNAKGKVTESDGYVPKGIGIDLWGDYVELDIDMETGQIQNWKPVSDARVIEAQKNS
Ga0302292_11088723	3300028738	Fen	MGILKISAKCSDLCSTLFTDAKGNESTSDGYVPKNIGIDEWGDYVVLEIDMQTGQIQNWKPVSDARVIEAQKEA
Ga0307928_100923003	3300031227	Saline Water	MGILKVDAKCSDLCSLIYTDKEGKQIQSDGYVPEGIGIGEFYGDYIEMEIDMETGQIQNWKPLTDAQIIKSIKKVQ
Ga0307932_10626391	3300031339	Saline Water	MGILKISAKCSDLCSTIFTDKKGKVTESDGYVPKEIGIDWYGDYVELEIDMKTGQIQNWKAVTDAQVIKAQRGA
Ga0307380_100485094	3300031539	Soil	MGTLSVSAKCSDLCFTTYIDKDGNETETDGYVPRDIGIGGGDYVDLEIDMKTGQILNWKPVSDAQVKASQKKT
Ga0307379_101186329	3300031565	Soil	MGILRISAKCSDLCWTQYTDSKGNTTESDSYVPEDIGIGDGSGDYVDIDIDMQTGQIQNWKPVSDSQVIAAQKKA
Ga0307379_107577432	3300031565	Soil	MGILRISAKCSDLCWTQYTDSKGNTTESNSYVPEGIGIGDGSGDYVDIDIDMQTGQILNWKPVSDSQVIAAQKKA
Ga0307376_100167538	3300031578	Soil	TEYTDSKGNETSSDSYVPKGLTIGGPDDDGDYIDIEIDTKTGQILNWKQVSEANIIKAIKKA
Ga0307992_10167712	3300031601	Marine	MGILTICAKCSDLCYTSFTGKDGKITESDGYVPENIGIGDSYGDYVEMEIDTKTGQIQNWKPVSDTNVRAAQKKT
Ga0307992_11440061	3300031601	Marine	SAKCSDLCWTKYTDSKGNETESDSYVPEGIGIDDGGDYVDIEIDMKTGQILNWKPVSDARVINAQKKA
Ga0307992_12791091	3300031601	Marine	MGNLKICAKCSDLCYTEYTDKDGCTTESNSYVPEGIGIDDGGDYVEIEIDMKTGQIQNWKPVSDTQVINAQKKA
Ga0307992_12812882	3300031601	Marine	MGILSISAKCSDLCCTEYTDKNGKETETDGYVPSNIGIGGGDYVDIDIDMKTGQILNWKPVSDAQVIK
Ga0307992_12988283	3300031601	Marine	MGILKISAKCSDLCWTEYTDGKGNKTESNSYVPEGIGIDDGGDYVDIEIDMKTGQILNWK
Ga0307990_10112808	3300031645	Marine	MGILTICAKCSDLCYTSFTGKDGKITESDGYVPENIGIGDSYGDYVEMEIDTKTGQIQNWKPVSDANVIAAQRKT
Ga0307991_10571936	3300031657	Marine	MGNLKISAKCSDLCWTKYTDSKGNETESDSYVPEGIGIDDGGDYVDIDIDMKTGQILNWKPVSDTQVINAQKKA
Ga0307375_101532625	3300031669	Soil	HNYRSRLCSLCCQYTDSKGNTTESDSYVPEDIGIGDGSGDYVDIDIDMQTGQIQNWKPVSDSQVIAAQKKA
Ga0307375_108771931	3300031669	Soil	MGILRINAKCSDCCWTEYTDSKGNTTESDSYVPEGIGIAEDGDCGDYVSMEIDMKTGQIQNWKPVSDAQVIKAQKEA
Ga0315293_104601211	3300031746	Sediment	MGILRISAKCSDLCWTEFTDSKGNKTESNGYVPKGIGIDEWGDYVVLDIDMVTGQILNWKPVSDAQVISAQKEADR
Ga0315293_109791131	3300031746	Sediment	MGILRISAKCSDLCWTEYTDDKGKKTNSDSYVPEGIGISEAGDCGDYVSMKIDMKTGQILNWKAVSDAKVVKAQKDVNK
Ga0315288_114064261	3300031772	Sediment	MGILTISAKCSDLCYTKYTDKNGKETESDGYVPTGIGIDEWGDYVVLDIDMETGQIQNWKPVRDKQVIAAQKKA
Ga0315294_113559402	3300031952	Sediment	MGILRISAKCSDLCWTEFTDSKGNKTESNGYVPKGIGIDEWGDYVVLDIDMKTGQILNWKPVTDAQVIKAQKET
Ga0315289_100425272	3300032046	Sediment	MGILSISAKCSDLCYTKYTDKNGKETESDGYVPKGIGIDEYGDYVVLDIDMETGQIQNWKPVTDKQVIAAQKKA
Ga0315289_102804074	3300032046	Sediment	MGILSISAKCSDLCCTTFTDAKGKVTESDGYVPQGIGIDETGDCGDYVSMDIDMQTGQILNWKPVSDAKVIKAQKKA
Ga0315284_100591509	3300032053	Sediment	MGILRISAKCSDLCWTEYTDAKGNKTETDDYVPSGIGIDKYGDYVVLDIDMQTGQIQNWKPRSDAQVIKAQKNINS
Ga0315284_108177112	3300032053	Sediment	MGILKISAKCSDLCWTQFTNDKGKVTNSDSYVPEGIGISEAGDCGDYVSMEIDMKTGQILNWKPVNDAMVVKAQMNA
Ga0315284_122561951	3300032053	Sediment	MGILKLEAKCSDMCVIHYTDKNGKVTETDGYVPEGIGVGEFYGDYVQMEIDMETGQIQNWKPCTDEQVKKALKKVS
Ga0315284_123043421	3300032053	Sediment	MGILKISAKCSDLCWTEYTDKNGNVTNSDSYVPEGIGITEDGDCGDYVRIDIDMQTGQILNWKPVSDAKVIKAQKEA
Ga0315277_102090415	3300032118	Sediment	GIFRIIIVTNTYKTMGILKISAKCSDLCWTEYTDKNGNVTNSDSYVPEGIGITEDGDCGDYVRIDIDMQTGQILNWKPVSDAKVIKAQKEA
Ga0315295_116323211	3300032156	Sediment	MIITKTHTTMGILKISAKCSDLCWTEYTDKNGNKTNSNSYVPEGIGITEDGDCGDYVCMDIDMATGQILNWKPVSDAQVIKAQKEA
Ga0315270_101052993	3300032275	Sediment	MGILRISAKCSDLCWTEYTDKNGNKTNSDSYVPEGIGIDEEGDCGDYVSMEIDMKTGQILNWKPQSDAKVLKAQKEA
Ga0315270_101843643	3300032275	Sediment	MGILRISAKCSDLCWTEYTDKNGNKTNSDSYVPEGIGIDEEGDCGDYVSMEIDMETGQIQNWKSVSDAKVIKAQKEA
Ga0316608_10020392	3300033420	Microbial Mat	MGILRISAKCSDLCWTEYTDAKGKKTESDGYVPSDIGIDEYGDYVVLDIDMKTGQIQNWKPVSDARVIKAQKAS
Ga0316612_10005983	3300033494	Microbial Mat	MGILRISAKCSDLCWTEYTDAKGNKTESDGYVPEGIGISSDGDCGDYVSLDIDMQTGQIQNWKPVSDARVIKAQKSA
Ga0334818_002142_792_1016	3300033821	Soil	MGILKISAKCSDLCSTIFTDSKGNVTESDGYVPSGIGIDEYGDYVVLDIDMKTGQIQNWKSVSDAQVIKAQKEA
Ga0334843_040540_2_217	3300033825	Soil	MGVLKISAKCSDLCSTIYTDKNGKVTESDGYVPQGIGIDEWGDYVDLEIDMQTGHILNWKPVTDEQVIEAQE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092108

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with PDB biological assemblies

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences