Metagenome / Metatranscriptome Family F090426

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090426
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	55 residues
Representative Sequence	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Number of Associated Samples	72
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.15 %
% of genes near scaffold ends (potentially truncated)	59.26 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (84.259 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (47.222 % of family members)
Environment Ontology (ENVO)	Unclassified (87.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.54% β-sheet: 8.20% Coil/Unstructured: 44.26%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02384	N6_Mtase	10.19
PF12323	HTH_OrfB_IS605	9.26
PF07282	OrfB_Zn_ribbon	6.48
PF03876	SHS2_Rpb7-N	5.56
PF05063	MT-A70	2.78
PF13456	RVT_3	2.78
PF14239	RRXRR	0.93
PF10102	DUF2341	0.93
PF04055	Radical_SAM	0.93
PF07581	Glug	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1095	DNA-directed RNA polymerase, subunit E'/Rpb7	Transcription [K]	5.56
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	5.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.89 %
Unclassified	root	N/A	8.33 %
Viruses	superkingdom	All Organisms → Viruses	2.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.26 %
Unclassified	root	N/A	8.33 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	4.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.22 %
Unclassified	root	N/A	8.33 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	4.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.93 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	72.22 %
Unclassified	root	N/A	8.33 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	3.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.93 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	72.22 %
Unclassified	root	N/A	8.33 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	72.22 %
Unclassified	root	N/A	8.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.93 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	72.22 %
Unclassified	root	N/A	8.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	0.93 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	72.22 %
Unclassified	root	N/A	8.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	0.93 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	72.22 %
Unclassified	root	N/A	8.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.78 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	0.93 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001592\|Draft_10167402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	901	Open in IMG/M
3300002168\|JGI24712J26585_10047919	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1853	Open in IMG/M
3300002168\|JGI24712J26585_10103842	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300002170\|JGI24711J26586_10164341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	546	Open in IMG/M
3300002173\|JGI24709J26583_10063231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1379	Open in IMG/M
3300002596\|draft_1415788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	4444	Open in IMG/M
3300003667\|LSCM3L_1029017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	901	Open in IMG/M
3300006398\|Ga0079067_1543124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1373	Open in IMG/M
3300006596\|Ga0079074_1246669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	669	Open in IMG/M
3300006600\|Ga0079065_1357389	Not Available	735	Open in IMG/M
3300006805\|Ga0075464_10111744	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300009121\|Ga0118671_1050266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1186	Open in IMG/M
3300009540\|Ga0073899_11088122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	560	Open in IMG/M
3300009607\|Ga0123327_1052367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1665	Open in IMG/M
3300009642\|Ga0123331_1017825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2980	Open in IMG/M
3300009642\|Ga0123331_1025913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2296	Open in IMG/M
3300009642\|Ga0123331_1087014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1021	Open in IMG/M
3300009642\|Ga0123331_1124362	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300009656\|Ga0123329_1026335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2988	Open in IMG/M
3300009656\|Ga0123329_1228190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	663	Open in IMG/M
3300009666\|Ga0116182_1091879	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300009666\|Ga0116182_1201850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	882	Open in IMG/M
3300009666\|Ga0116182_1332999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	615	Open in IMG/M
3300009670\|Ga0116183_1459671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	521	Open in IMG/M
3300009671\|Ga0123334_1478360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	514	Open in IMG/M
3300009674\|Ga0116173_1057125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2142	Open in IMG/M
3300009680\|Ga0123335_1205073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1014	Open in IMG/M
3300009681\|Ga0116174_10446165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	595	Open in IMG/M
3300009685\|Ga0116142_10517927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	566	Open in IMG/M
3300009693\|Ga0116141_10162482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1265	Open in IMG/M
3300009693\|Ga0116141_10367409	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300009693\|Ga0116141_10524008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	595	Open in IMG/M
3300009696\|Ga0116177_10098667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1700	Open in IMG/M
3300009704\|Ga0116145_1131105	Not Available	1018	Open in IMG/M
3300009707\|Ga0116195_1000861	All Organisms → cellular organisms → Bacteria	21470	Open in IMG/M
3300009707\|Ga0116195_1072014	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	742	Open in IMG/M
3300009708\|Ga0116194_1021173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2060	Open in IMG/M
3300009715\|Ga0116160_1076465	Not Available	1507	Open in IMG/M
3300009773\|Ga0123333_10305677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	662	Open in IMG/M
3300009780\|Ga0116156_10064190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2267	Open in IMG/M
3300010235\|Ga0136247_10040464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	781	Open in IMG/M
3300010347\|Ga0116238_10296230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1080	Open in IMG/M
3300010351\|Ga0116248_10830538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	641	Open in IMG/M
3300010353\|Ga0116236_10060828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	3919	Open in IMG/M
3300010353\|Ga0116236_10099118	All Organisms → cellular organisms → Archaea → Euryarchaeota	2840	Open in IMG/M
3300010355\|Ga0116242_10726417	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300010356\|Ga0116237_10059787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	4215	Open in IMG/M
3300010356\|Ga0116237_10176406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2047	Open in IMG/M
3300010356\|Ga0116237_10935695	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	731	Open in IMG/M
3300010365\|Ga0116251_10143301	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300010365\|Ga0116251_10286985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	942	Open in IMG/M
3300014203\|Ga0172378_10178418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1699	Open in IMG/M
3300014203\|Ga0172378_10276717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1301	Open in IMG/M
3300014203\|Ga0172378_10345132	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300014204\|Ga0172381_10015361	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	7114	Open in IMG/M
3300014204\|Ga0172381_10099400	All Organisms → Viruses → Predicted Viral	2415	Open in IMG/M
3300014204\|Ga0172381_10495155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	946	Open in IMG/M
3300014204\|Ga0172381_11291152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	529	Open in IMG/M
3300014205\|Ga0172380_10445682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	964	Open in IMG/M
3300014206\|Ga0172377_10362601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1211	Open in IMG/M
3300014206\|Ga0172377_10521636	Not Available	966	Open in IMG/M
3300015214\|Ga0172382_10684424	Not Available	718	Open in IMG/M
3300015214\|Ga0172382_11087456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	525	Open in IMG/M
3300019237\|Ga0180028_1316341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	563	Open in IMG/M
3300020072\|Ga0180031_1052204	Not Available	571	Open in IMG/M
3300020812\|Ga0214071_1417725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	3814	Open in IMG/M
3300025393\|Ga0208041_1000518	Not Available	36233	Open in IMG/M
3300025677\|Ga0209719_1037462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1887	Open in IMG/M
3300025677\|Ga0209719_1093766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	921	Open in IMG/M
3300025683\|Ga0208564_1014233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	4073	Open in IMG/M
3300025708\|Ga0209201_1034289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2336	Open in IMG/M
3300025713\|Ga0208195_1073769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1309	Open in IMG/M
3300025714\|Ga0208458_1097752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1046	Open in IMG/M
3300025714\|Ga0208458_1242637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	544	Open in IMG/M
3300025737\|Ga0208694_1049228	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300025737\|Ga0208694_1121911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	947	Open in IMG/M
3300025748\|Ga0208459_1033647	All Organisms → Viruses → Predicted Viral	2459	Open in IMG/M
3300025784\|Ga0209200_1087948	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1201	Open in IMG/M
3300025784\|Ga0209200_1273177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	563	Open in IMG/M
3300025856\|Ga0209604_1245895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	686	Open in IMG/M
3300025856\|Ga0209604_1300070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	593	Open in IMG/M
3300025859\|Ga0209096_1103432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1169	Open in IMG/M
3300025861\|Ga0209605_1174146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	819	Open in IMG/M
3300025861\|Ga0209605_1189223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	776	Open in IMG/M
3300025871\|Ga0209311_1305891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	596	Open in IMG/M
3300025871\|Ga0209311_1327322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	568	Open in IMG/M
3300025877\|Ga0208460_10334009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	555	Open in IMG/M
3300026194\|Ga0209509_1008078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	4621	Open in IMG/M
3300026195\|Ga0209312_1003323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	9787	Open in IMG/M
3300026250\|Ga0209612_1009574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	4739	Open in IMG/M
3300026250\|Ga0209612_1033722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1827	Open in IMG/M
3300026255\|Ga0209613_1003745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	9815	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1203757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	764	Open in IMG/M
(restricted) 3300028576\|Ga0255340_1214704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	783	Open in IMG/M
3300028601\|Ga0265295_1280658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	610	Open in IMG/M
3300028602\|Ga0265294_10017827	Not Available	7485	Open in IMG/M
3300028602\|Ga0265294_10067983	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300028602\|Ga0265294_10145849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1793	Open in IMG/M
3300028602\|Ga0265294_10265024	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300028602\|Ga0265294_10309359	Not Available	1048	Open in IMG/M
3300028602\|Ga0265294_10322935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1015	Open in IMG/M
3300028602\|Ga0265294_10537483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	701	Open in IMG/M
3300028602\|Ga0265294_10679725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	591	Open in IMG/M
3300028603\|Ga0265293_10016866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	8909	Open in IMG/M
3300028627\|Ga0302243_1073826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	694	Open in IMG/M
3300028638\|Ga0302240_1115258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	556	Open in IMG/M
3300029440\|Ga0167329_1010475	All Organisms → Viruses → Predicted Viral	2685	Open in IMG/M
3300029942\|Ga0168096_1005828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	4395	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	87.04%
Environmental	Environmental	12.96%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	54.63%
Bioreactor	Engineered → Bioreactor	16.67%
Aquatic	Environmental → Aquatic	12.04%
Solid Waste	Engineered → Solid Waste	10.19%
Biotransformation	Engineered → Biotransformation	3.70%
Built Environment	Engineered → Built Environment	1.85%
Terrestrial	Environmental → Terrestrial	0.93%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	50.00%
Anaerobic	Engineered → Bioreactor → Anaerobic	16.67%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Landfill	Engineered → Solid Waste → Landfill	10.19%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	3.70%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	3.70%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	1.85%
Marine	Environmental → Aquatic → Marine	0.93%
Oil Reservoir	Environmental → Terrestrial → Oil Reservoir	0.93%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	50.00%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	16.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	11.11%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	10.19%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	3.70%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	1.85%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	1.85%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	1.85%
Coastal	Environmental → Aquatic → Marine → Coastal	0.93%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	50.00%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	10.19%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	10.19%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	3.70%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	1.85%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	1.85%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	1.85%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	0.93%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	47.22%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	15.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	10.19%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	10.19%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	3.70%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	1.85%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	1.85%
Biosolids	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids	1.85%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	1.85%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	0.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Produced Fluid	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Produced Fluid	0.93%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.93%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	0.93%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001592	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes in water sample from Medicine Hat oil field -PW_MHGC_2012April2:	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002596	Hydrocarbon contaminated oil fields microbial communities from Alberta, Canada - Microbes in water sample from Medicine Hat oil field -PW_MHGC_2012April10	Engineered	Open in IMG/M
3300003667	Lithgow State Coal Mine Metagenomic Study (LSCM 3 Late (Sample 2))	Environmental	Open in IMG/M
3300006398	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006596	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Leu_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006600	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009121	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.A IDBA	Engineered	Open in IMG/M
3300009540	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Ph	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009685	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009696	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG	Engineered	Open in IMG/M
3300009704	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG1_MetaG	Engineered	Open in IMG/M
3300009707	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG	Engineered	Open in IMG/M
3300009708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009773	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNA	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300010235	Terrestrial oil reservoir microbial community from Schrader Bluff Formation, Alaska - SB2	Environmental	Open in IMG/M
3300010347	AD_JPHGca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300010355	AD_USDVca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010365	AD_USDIca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019237	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R1-A RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300020072	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R2-B RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300020812	Anaerobic digester digestate microbial community, University of Toronto, Ontario, Canada - DG074 megahit	Engineered	Open in IMG/M
3300025393	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025737	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025748	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025784	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025856	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025871	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025877	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026195	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026250	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026255	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300028576 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant10	Engineered	Open in IMG/M
3300028601	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Methane capture system biofilm	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028627	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Met	Engineered	Open in IMG/M
3300028638	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_His	Engineered	Open in IMG/M
3300029440	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP10 - Uppsala-digested 111	Engineered	Open in IMG/M
3300029942	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP8 - Uppsala-digested 109	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_101674023	3300001592	Hydrocarbon Resource Environments	KMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
JGI24712J26585_100479197	3300002168	Biogas Fermentantion	TGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVHDWD*
JGI24712J26585_101038421	3300002168	Biogas Fermentantion	MVTWKQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD*
JGI24711J26586_101643411	3300002170	Biogas Fermentantion	LLDAITCVMLPSGEADIPECDIDRALRAVRGLPVHDWD*
JGI24709J26583_100632314	3300002173	Biogas Fermentantion	VTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
draft_14157881	3300002596	Hydrocarbon Resource Environments	KMIATGLLDAITCVMLPSGEADIPECDIDRALRAAQGKPVFDWD*
LSCM3L_10290172	3300003667	Coalbed Water	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0079067_15431244	3300006398	Anaerobic Digestor Sludge	EEGALMVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0079074_12466692	3300006596	Anaerobic Digestor Sludge	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0079065_13573893	3300006600	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0075464_101117444	3300006805	Aqueous	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGESDIPECDIARALRAVRGLPVYDWD*
Ga0118671_10502662	3300009121	Anaerobic Wastewater Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADISECDIARALRAVRGLPVYDWD*
Ga0073899_110881222	3300009540	Activated Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVHDWD*
Ga0123327_10523673	3300009607	Anaerobic Biogas Reactor	GEEMAEKMIATGLLDAITCVMLPSGEADIPQCDIDRALRAAQGKPVFDWD*
Ga0123331_10178251	3300009642	Anaerobic Biogas Reactor	EMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0123331_10259134	3300009642	Anaerobic Biogas Reactor	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPQCDIDRALRAAQGKPVFDWD*
Ga0123331_10870144	3300009642	Anaerobic Biogas Reactor	EMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0123331_11243624	3300009642	Anaerobic Biogas Reactor	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRA
Ga0123329_10263351	3300009656	Anaerobic Biogas Reactor	GEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0123329_12281903	3300009656	Anaerobic Biogas Reactor	VMVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADISECDIARALRAVRGLPVYDWD*
Ga0116182_10918792	3300009666	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGRPVSDWD*
Ga0116182_12018502	3300009666	Anaerobic Digestor Sludge	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGRPVPDWD*
Ga0116182_13329992	3300009666	Anaerobic Digestor Sludge	MVTWKQVIERHGQEMADRMVATGLLDGITCVRLPSGEADIPQCDIDRALRAVQGKPVFDWD*
Ga0116183_14596712	3300009670	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPV
Ga0123334_14783602	3300009671	Anaerobic Biogas Reactor	EMAEKMIATGLLDAITCVMLPSGEADIPQCDIDRALRAAQGKPVFDWD*
Ga0116173_10571254	3300009674	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0123335_12050731	3300009680	Anaerobic Biogas Reactor	EKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0116174_104461651	3300009681	Anaerobic Digestor Sludge	ATGLLDAITCVMLPSGEADIPECDIARALRAVRGRPVPDWD*
Ga0116142_105179273	3300009685	Anaerobic Digestor Sludge	LDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0116141_101624821	3300009693	Anaerobic Digestor Sludge	MAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVPDWD*
Ga0116141_103674091	3300009693	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRG
Ga0116141_105240081	3300009693	Anaerobic Digestor Sludge	MAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0116177_100986674	3300009696	Anaerobic Digestor Sludge	GDHDHARPPSTEEGALMVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0116145_11311051	3300009704	Anaerobic Digestor Sludge	MVTWKQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0116195_100086135	3300009707	Anaerobic Digestor Sludge	MVTWKQVIERHGADLAEKMVATGLLDGITCVLLPSGEADIPQCDIDRALRAVRGLPVHDWD*
Ga0116195_10720141	3300009707	Anaerobic Digestor Sludge	MVTWKQVIERHGQEMADRMVATGLLDGITCVMLPSGEADIPQCDIDRALRA
Ga0116194_10211731	3300009708	Anaerobic Digestor Sludge	GFAPAPEDPLMVTWKQVIERHGQEMADRMVATGLLDGITCVMLPSGEADIPQCDIDRALRAAQGKPVFDWD*
Ga0116160_10764653	3300009715	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAAQGKPVFDWD*
Ga0123333_103056771	3300009773	Anaerobic Biogas Reactor	IERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD*
Ga0116156_100641907	3300009780	Anaerobic Digestor Sludge	EKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0136247_100404643	3300010235	Produced Fluid	EGDRGHAPLPGHEEGSVMVTWKQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0116238_102962302	3300010347	Anaerobic Digestor Sludge	MVTWKQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVHDWD*
Ga0116248_108305381	3300010351	Anaerobic Digestor Sludge	EEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGRPVPDWD*
Ga0116236_100608284	3300010353	Anaerobic Digestor Sludge	MVTWRQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD*
Ga0116236_100991181	3300010353	Anaerobic Digestor Sludge	HGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0116242_107264171	3300010355	Anaerobic Digestor Sludge	MVTWQQVIERHGQEMADRMVATGLLDAITCVMLPSGEADIPQCDIDRALRAV
Ga0116237_100597871	3300010356	Anaerobic Digestor Sludge	EEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0116237_101764066	3300010356	Anaerobic Digestor Sludge	EEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD*
Ga0116237_109356952	3300010356	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD*
Ga0116251_101433011	3300010365	Anaerobic Digestor Sludge	EKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVHDWD*
Ga0116251_102869853	3300010365	Anaerobic Digestor Sludge	EKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD*
Ga0172378_101784182	3300014203	Groundwater	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPQCDIARALRAVRGLPVHDWD*
Ga0172378_102767172	3300014203	Groundwater	MVTWKQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD*
Ga0172378_103451324	3300014203	Groundwater	MVTWQQVIERHGQEMADRMVATGLLDGITCVRLPSGEADIPQCDIDRALRAVQGKPVFDWD*
Ga0172381_100153614	3300014204	Landfill Leachate	MVTWKQVVVEYGQEMCDKMIATGYLDAITVVRLPSGEADIPQIDIERAYRAANGRTVHDWD*
Ga0172381_100994007	3300014204	Landfill Leachate	MPTWKQVVEKYGQEMSDKMADTGLLDAITCVMTPAGEADIPQCDIDLAYRAANGGEIRGWDWD*
Ga0172381_104951551	3300014204	Landfill Leachate	MVATGLLDGITCVRLPSGEADIPQCDIDRALRAAQGKRVFDWD*
Ga0172381_112911522	3300014204	Landfill Leachate	MVTWKQVIERHGQEMADRMVATGLLDGITCVMLPSGEADIPECDIDRALRAVQGKPVFDWD*
Ga0172380_104456822	3300014205	Landfill Leachate	MVTWQQVIERHGQEMADRMVATGLLDGITCVMLPSGEGDIPQCDIDRALRAVRGLPVPDWD*
Ga0172377_103626011	3300014206	Landfill Leachate	QEMADRMVATGLLDGITCVRLPSGEADIPQCDIDRALRAVQGKPVFDWD*
Ga0172377_105216363	3300014206	Landfill Leachate	MVTWQQVIERHGQEMADRMVATGLLDGITCVMLPSGEADIPECDIDRALRAVQGKPVFDWD*
Ga0172382_106844241	3300015214	Landfill Leachate	TGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVPDWD*
Ga0172382_110874561	3300015214	Landfill Leachate	MVTWKQVIERHGQEMADRMVATGLLDGITCVMLPSGEADIPQCDIDRALRAAQGKPV
Ga0180028_13163411	3300019237	Anaerobic Biogas Reactor	VTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0180031_10522042	3300020072	Anaerobic Biogas Reactor	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPQCDIDRALRAAQGKPVFDW
Ga0214071_14177253	3300020812	Anaerobic Digester Digestate	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDW
Ga0208041_100051878	3300025393	Anaerobic Digestor Sludge	MVTWKQVIERHGADLAEKMVATGLLDGITCVLLPSGEADIPQCDIDRALRAVRGLPVHDW
Ga0209719_10374622	3300025677	Anaerobic Digestor Sludge	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDW
Ga0209719_10937662	3300025677	Anaerobic Digestor Sludge	MAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAAQGKPVFDWD
Ga0208564_101423312	3300025683	Anaerobic Digestor Sludge	EGALMVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0209201_10342894	3300025708	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDW
Ga0208195_10737692	3300025713	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGRPVSDW
Ga0208458_10977524	3300025714	Anaerobic Digestor Sludge	EMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD
Ga0208458_12426372	3300025714	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGRPVP
Ga0208694_10492282	3300025737	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVHDW
Ga0208694_11219114	3300025737	Anaerobic Digestor Sludge	DAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD
Ga0208459_10336475	3300025748	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGRPVPDW
Ga0209200_10879484	3300025784	Anaerobic Digestor Sludge	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAV
Ga0209200_12731771	3300025784	Anaerobic Digestor Sludge	LLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD
Ga0209604_12458951	3300025856	Anaerobic Digestor Sludge	ERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD
Ga0209604_13000702	3300025856	Anaerobic Digestor Sludge	EMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0209096_11034324	3300025859	Anaerobic Digestor Sludge	DAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD
Ga0209605_11741461	3300025861	Anaerobic Digestor Sludge	GALMVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD
Ga0209605_11892233	3300025861	Anaerobic Digestor Sludge	AEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0209311_13058911	3300025871	Anaerobic Digestor Sludge	EKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0209311_13273221	3300025871	Anaerobic Digestor Sludge	TGLLDAITCVMLPSGEADIPECDIARALRAVRGRPVPDWD
Ga0208460_103340092	3300025877	Anaerobic Digestor Sludge	EEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD
Ga0209509_10080784	3300026194	Anaerobic Biogas Reactor	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADISECDIARALRAVRGLPVYDW
Ga0209312_100332321	3300026195	Anaerobic Biogas Reactor	SVMVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0209612_100957412	3300026250	Anaerobic Biogas Reactor	GEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0209612_10337221	3300026250	Anaerobic Biogas Reactor	ERYGEEMAEKMIATGLLDAITCVMLPSGEADIPQCDIDRALRAAQGKPVFDWD
Ga0209613_100374521	3300026255	Anaerobic Biogas Reactor	EEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
(restricted) Ga0255343_12037571	3300028561	Wastewater	GEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDWD
(restricted) Ga0255340_12147042	3300028576	Wastewater	MVTWRQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVYDW
Ga0265295_12806582	3300028601	Landfill Leachate	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGRPV
Ga0265294_100178277	3300028602	Groundwater	VVTWKQVVEKHGQEMADEMIATGLLDGITVTRHPSGEFDIPERDIRRAYHAALGQRSRRK
Ga0265294_100679836	3300028602	Groundwater	MVTWKQVIERHGQEMADRMVATGLLDGITCVRLPSGEADIPQCDIDRALRAVQGKPVFDW
Ga0265294_101458494	3300028602	Groundwater	MVTWQQVIERHGQEMADRMVATGLLDGITCVRLPSGEADIPQCDIDRALRAVQGKPVFDW
Ga0265294_102650242	3300028602	Groundwater	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPQCDIDRALRAVRGLPVYDW
Ga0265294_103093592	3300028602	Groundwater	MVTWKQVVVEYGQEMCDKMIATGYLDAITVVRLPSGEADIPQIDIERAYRAANGRTVHDW
Ga0265294_103229353	3300028602	Groundwater	MVTWQQVIERHGQEMADRMVATGLLDGITCVMLPSGEGDIPQCDIDRALRAVRGLPVPDW
Ga0265294_105374832	3300028602	Groundwater	MVTWKQVIERHGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVPDW
Ga0265294_106797251	3300028602	Groundwater	EEGSVMVTWKQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDWD
Ga0265293_1001686619	3300028603	Landfill Leachate	MVTWKQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIDRALRAVRGLPVPDW
Ga0302243_10738261	3300028627	Activated Sludge	EEGALMVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0302240_11152582	3300028638	Activated Sludge	PGPEEGALMVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPECDIARALRAVRGLPVHDWD
Ga0167329_10104751	3300029440	Biosolids	MVTWRQVIERYGEEMAEKMIATGLLDAITCVMLPSGEADIPQCDIARALRAVRGLPVYDW
Ga0168096_10058281	3300029942	Biosolids	MVTWKQVIEEYGEDLAEQMIATGLLDAITCVMLPSGEADIPQCDIARALRAVRGLPVYDW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters