Metagenome Family F089951

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089951
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	MHEHGMNPGMMQQQEMLMTEMWESLNDDQKKSLMKRMLDSKIMMKEGMIKHFQFKIETMKMVKKMLDEC
Number of Associated Samples	80
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	74.07 %
% of genes near scaffold ends (potentially truncated)	23.15 %
% of genes from short scaffolds (< 2000 bps)	60.19 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (84.259 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil (12.963 % of family members)
Environment Ontology (ENVO)	Unclassified (35.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.889 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.82% β-sheet: 0.00% Coil/Unstructured: 39.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02589	LUD_dom	11.11
PF00724	Oxidored_FMN	8.33
PF03551	PadR	3.70
PF07934	OGG_N	2.78
PF00753	Lactamase_B	1.85
PF04587	ADP_PFK_GK	1.85
PF08448	PAS_4	1.85
PF07995	GSDH	1.85
PF11897	DUF3417	1.85
PF01035	DNA_binding_1	1.85
PF00801	PKD	0.93
PF00515	TPR_1	0.93
PF02777	Sod_Fe_C	0.93
PF02272	DHHA1	0.93
PF00672	HAMP	0.93
PF12860	PAS_7	0.93
PF03484	B5	0.93
PF01409	tRNA-synt_2d	0.93
PF05221	AdoHcyase	0.93
PF05067	Mn_catalase	0.93
PF14358	DUF4405	0.93
PF01025	GrpE	0.93
PF01810	LysE	0.93
PF13190	PDGLE	0.93
PF00977	His_biosynth	0.93
PF03358	FMN_red	0.93
PF02661	Fic	0.93
PF01566	Nramp	0.93
PF09376	NurA	0.93
PF13186	SPASM	0.93
PF00174	Oxidored_molyb	0.93
PF00578	AhpC-TSA	0.93
PF13439	Glyco_transf_4	0.93
PF10826	DUF2551	0.93
PF13412	HTH_24	0.93
PF02996	Prefoldin	0.93
PF14622	Ribonucleas_3_3	0.93
PF13426	PAS_9	0.93
PF01891	CbiM	0.93
PF02567	PhzC-PhzF	0.93
PF00989	PAS	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	8.33
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	8.33
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	3.70
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	3.70
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	3.70
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	2.78
COG4809	ADP-dependent glucokinase/phosphofructokinase	Carbohydrate transport and metabolism [G]	1.85
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	1.85
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.85
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.85
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.93
COG0576	Molecular chaperone GrpE (heat shock protein HSP-70)	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1730	Prefoldin subunit 5	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.93
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.93
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.93
COG2024	O-phosphoseryl-tRNA(Cys) synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.93
COG0310	ABC-type Co2+ transport system, permease component	Inorganic ion transport and metabolism [P]	0.93
COG3546	Mn-containing catalase (includes spore coat protein CotJC)	Inorganic ion transport and metabolism [P]	0.93
COG0072	Phenylalanyl-tRNA synthetase beta subunit	Translation, ribosomal structure and biogenesis [J]	0.93
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.93
COG0016	Phenylalanyl-tRNA synthetase alpha subunit	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.04 %
Unclassified	root	N/A	12.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.04 %
Unclassified	root	N/A	12.96 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	84.26 %
Unclassified	root	N/A	12.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	83.33 %
Unclassified	root	N/A	12.96 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	82.41 %
Unclassified	root	N/A	12.96 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	1.85 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	82.41 %
Unclassified	root	N/A	12.96 %
Oomycota	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota	1.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	73.15 %
Unclassified	root	N/A	12.96 %
Saprolegniales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales	1.85 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Name	Rank	Taxonomy	Distribution
Methanoregulaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	64.81 %
Unclassified	root	N/A	12.96 %
Saprolegniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae	1.85 %
Methanomicrobiaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	0.93 %
Cyanobacteria bacterium UBA11372	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA11372	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Name	Rank	Taxonomy	Distribution
Methanoregula	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	56.48 %
Unclassified	root	N/A	12.96 %
Methanosphaerula	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanosphaerula	1.85 %
Methanoculleus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	0.93 %
Aphanomyces	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces	0.93 %
Cyanobacteria bacterium UBA11372	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA11372	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Name	Rank	Taxonomy	Distribution
Methanoregula boonei	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	38.89 %
Unclassified	root	N/A	12.96 %
Methanoregula formicica	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	6.48 %
Methanosphaerula palustris	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanosphaerula → Methanosphaerula palustris	1.85 %
unclassified Methanoregula	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → unclassified Methanoregula	0.93 %
Methanoculleus bourgensis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	0.93 %
Aphanomyces	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces	0.93 %
Cyanobacteria bacterium UBA11372	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA11372	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Name	Rank	Taxonomy	Distribution
Methanoregula boonei	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	38.89 %
Unclassified	root	N/A	12.96 %
Methanoregula formicica	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	6.48 %
Methanosphaerula palustris	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanosphaerula → Methanosphaerula palustris	1.85 %
Methanoregula sp. PtaU1.Bin051	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → unclassified Methanoregula → Methanoregula sp. PtaU1.Bin051	0.93 %
Methanoculleus bourgensis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	0.93 %
Aphanomyces	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces	0.93 %
Cyanobacteria bacterium UBA11372	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA11372	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000077\|WSSedB1B2DRAFT_c023520	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	567	Open in IMG/M
3300000568\|Draft_10576286	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	904	Open in IMG/M
3300001213\|JGIcombinedJ13530_101335049	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	955	Open in IMG/M
3300001213\|JGIcombinedJ13530_101727573	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	645	Open in IMG/M
3300002219\|SCADCLC_10052642	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	22544	Open in IMG/M
3300002961\|JGI11641J44799_10000343	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	13728	Open in IMG/M
3300003432\|JGI20214J51088_10208537	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1373	Open in IMG/M
3300003852\|Ga0031655_10267001	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanosphaerula → Methanosphaerula palustris	641	Open in IMG/M
3300003852\|Ga0031655_10288640	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	614	Open in IMG/M
3300003860\|Ga0031658_1015675	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1278	Open in IMG/M
3300003861\|Ga0031654_10006568	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	3448	Open in IMG/M
3300004078\|Ga0055513_10007400	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1669	Open in IMG/M
3300004078\|Ga0055513_10158182	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	561	Open in IMG/M
3300004078\|Ga0055513_10162623	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	555	Open in IMG/M
3300005259\|Ga0071344_1073262	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	738	Open in IMG/M
3300005323\|Ga0074198_1000802	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	27168	Open in IMG/M
3300006930\|Ga0079303_10306189	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae	657	Open in IMG/M
3300006949\|Ga0075528_10031104	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1354	Open in IMG/M
3300009091\|Ga0102851_12369645	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	606	Open in IMG/M
3300009304\|Ga0116588_1182617	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	532	Open in IMG/M
3300009616\|Ga0116111_1004450	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	7265	Open in IMG/M
3300009692\|Ga0116171_10035724	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3390	Open in IMG/M
3300010339\|Ga0074046_10000992	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	26274	Open in IMG/M
3300012931\|Ga0153915_10175662	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	2338	Open in IMG/M
3300012931\|Ga0153915_10476306	Not Available	1424	Open in IMG/M
3300014160\|Ga0181517_10531297	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	593	Open in IMG/M
3300014199\|Ga0181535_10002799	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	20874	Open in IMG/M
3300014303\|Ga0075358_1033061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA11372	807	Open in IMG/M
3300014494\|Ga0182017_10019076	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	4763	Open in IMG/M
3300014496\|Ga0182011_10001320	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	21794	Open in IMG/M
3300014498\|Ga0182019_10942309	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	624	Open in IMG/M
3300014502\|Ga0182021_11211921	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	909	Open in IMG/M
3300014502\|Ga0182021_11243733	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	897	Open in IMG/M
3300014502\|Ga0182021_11716951	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	756	Open in IMG/M
3300014638\|Ga0181536_10545005	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	500	Open in IMG/M
3300017932\|Ga0187814_10028133	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	2098	Open in IMG/M
3300017944\|Ga0187786_10000147	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	23062	Open in IMG/M
3300017975\|Ga0187782_10007671	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	7994	Open in IMG/M
3300017988\|Ga0181520_10014141	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	9938	Open in IMG/M
3300017988\|Ga0181520_10019504	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	7858	Open in IMG/M
3300018012\|Ga0187810_10017507	Not Available	2549	Open in IMG/M
3300018013\|Ga0187873_1011357	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	5198	Open in IMG/M
3300018020\|Ga0187861_10311787	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	672	Open in IMG/M
3300018021\|Ga0187882_1010967	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	5941	Open in IMG/M
3300018023\|Ga0187889_10305003	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	703	Open in IMG/M
3300018030\|Ga0187869_10545211	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	550	Open in IMG/M
3300018058\|Ga0187766_10589938	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	757	Open in IMG/M
3300022593\|Ga0236338_1001330	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	6353	Open in IMG/M
3300022650\|Ga0236339_1124532	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	6236	Open in IMG/M
3300025442\|Ga0208034_1057658	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → unclassified Methanoregula → Methanoregula sp. PtaU1.Bin051	774	Open in IMG/M
3300025858\|Ga0209099_1027450	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	3089	Open in IMG/M
3300025891\|Ga0209585_10114200	Not Available	1029	Open in IMG/M
3300025891\|Ga0209585_10270121	Not Available	677	Open in IMG/M
3300025963\|Ga0210146_1002686	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1645	Open in IMG/M
3300025975\|Ga0210091_1009499	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	913	Open in IMG/M
3300025978\|Ga0210092_1022857	Not Available	863	Open in IMG/M
3300027419\|Ga0209340_1000216	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	75114	Open in IMG/M
3300027887\|Ga0208980_10596505	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces	629	Open in IMG/M
3300027896\|Ga0209777_10119888	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2211	Open in IMG/M
3300027902\|Ga0209048_10075420	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	2659	Open in IMG/M
3300027902\|Ga0209048_10212096	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1401	Open in IMG/M
3300028032\|Ga0265296_1013781	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	5083	Open in IMG/M
3300029288\|Ga0265297_10153239	Not Available	1748	Open in IMG/M
3300029288\|Ga0265297_10292824	Not Available	1136	Open in IMG/M
3300029989\|Ga0311365_11516135	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	575	Open in IMG/M
3300029990\|Ga0311336_10070187	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	2735	Open in IMG/M
3300031235\|Ga0265330_10000025	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	147111	Open in IMG/M
3300031235\|Ga0265330_10340493	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	633	Open in IMG/M
3300031344\|Ga0265316_10106706	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	2124	Open in IMG/M
3300031539\|Ga0307380_10152737	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	2291	Open in IMG/M
3300031565\|Ga0307379_10334182	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1479	Open in IMG/M
3300031566\|Ga0307378_10629058	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	936	Open in IMG/M
3300031707\|Ga0315291_10062494	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	4141	Open in IMG/M
3300031726\|Ga0302321_102952892	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	555	Open in IMG/M
3300031746\|Ga0315293_10116414	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	2254	Open in IMG/M
3300031834\|Ga0315290_10224780	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1635	Open in IMG/M
3300031834\|Ga0315290_10523758	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanosphaerula → Methanosphaerula palustris	1033	Open in IMG/M
3300031999\|Ga0315274_10008077	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	15230	Open in IMG/M
3300031999\|Ga0315274_11784225	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	565	Open in IMG/M
3300032020\|Ga0315296_10098986	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1865	Open in IMG/M
3300032342\|Ga0315286_11808244	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	574	Open in IMG/M
3300032562\|Ga0316226_1258750	Not Available	689	Open in IMG/M
3300032829\|Ga0335070_10000001	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	778343	Open in IMG/M
3300032829\|Ga0335070_10296049	Not Available	1570	Open in IMG/M
3300032829\|Ga0335070_11832484	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	548	Open in IMG/M
3300032897\|Ga0335071_10051926	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	4044	Open in IMG/M
3300032897\|Ga0335071_10347281	Not Available	1437	Open in IMG/M
3300033004\|Ga0335084_10442219	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1338	Open in IMG/M
3300033402\|Ga0326728_10000057	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	438004	Open in IMG/M
3300033402\|Ga0326728_10000151	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	283912	Open in IMG/M
3300033402\|Ga0326728_10001860	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	72580	Open in IMG/M
3300033402\|Ga0326728_10002534	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	60262	Open in IMG/M
3300033402\|Ga0326728_10009379	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	23606	Open in IMG/M
3300033402\|Ga0326728_10032347	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	8714	Open in IMG/M
3300033402\|Ga0326728_10104149	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	3397	Open in IMG/M
3300033402\|Ga0326728_10228047	Not Available	1817	Open in IMG/M
3300033402\|Ga0326728_10438020	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	1094	Open in IMG/M
3300033402\|Ga0326728_10641902	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	814	Open in IMG/M
3300033418\|Ga0316625_100988283	All Organisms → cellular organisms → Archaea	748	Open in IMG/M
3300033433\|Ga0326726_10001063	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	25313	Open in IMG/M
3300033433\|Ga0326726_10429094	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	1257	Open in IMG/M
3300033433\|Ga0326726_10702719	Not Available	976	Open in IMG/M
3300033487\|Ga0316630_11123055	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	694	Open in IMG/M
3300033521\|Ga0316616_103252040	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	612	Open in IMG/M
3300034091\|Ga0326724_0139704	All Organisms → cellular organisms → Archaea → Euryarchaeota	1518	Open in IMG/M
3300034126\|Ga0370486_018394	Not Available	1565	Open in IMG/M
3300034156\|Ga0370502_0170708	Not Available	695	Open in IMG/M
3300034195\|Ga0370501_0319091	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.81%
Engineered	Engineered	7.41%
Host-Associated	Host-Associated	2.78%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	46.30%
Terrestrial	Environmental → Terrestrial	43.52%
Wastewater	Engineered → Wastewater	3.70%
Plants	Host-Associated → Plants	2.78%
Solid Waste	Engineered → Solid Waste	1.85%
Bioremediation	Engineered → Bioremediation	1.85%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	34.26%
Soil	Environmental → Terrestrial → Soil	26.85%
Peat	Environmental → Terrestrial → Peat	15.74%
Marine	Environmental → Aquatic → Marine	11.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.78%
Landfill	Engineered → Solid Waste → Landfill	1.85%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.85%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.85%
Tetrachloroethylene And Derivatives	Engineered → Bioremediation → Tetrachloroethylene And Derivatives	1.85%
Sediment	Environmental → Aquatic → Sediment	0.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.93%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	11.11%
Lake	Environmental → Aquatic → Freshwater → Lake	9.26%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.78%
Clay	Environmental → Terrestrial → Soil → Clay	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	1.85%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.85%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	1.85%
Tetrachloroethylene	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.41%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.56%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	5.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.78%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	1.85%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.85%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	1.85%
Unclassified	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	12.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.41%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.48%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.56%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	5.56%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	1.85%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.85%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	1.85%
Bioremediated Contaminated Groundwater	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater	1.85%
Anaerobic Enrichment Culture	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.93%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000077	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Bulk	Environmental	Open in IMG/M
3300000568	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002219	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004078	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2	Environmental	Open in IMG/M
3300005259	Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid and Glucose under anaerobic conditions - HA Sample 1	Environmental	Open in IMG/M
3300005323	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-23	Engineered	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009304	Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_2 SPAdes	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009692	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG	Engineered	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014303	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D1	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300022650	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W3	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025858	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025963	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025975	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025978	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027419	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-23 (SPAdes)	Engineered	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028032	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #1	Environmental	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034126	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16	Environmental	Open in IMG/M
3300034156	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB1B2DRAFT_0235202	3300000077	Wetland	MHEQGMGHGMGAMQWHDMLTMEIWNKMSDEQKKTLMKRMVDGKILMKENWIKQFQFKIETMKMVKKMLDES*
Draft_105762862	3300000568	Hydrocarbon Resource Environments	MMHEHGMQPGMMQQKDAVMMEMWETLTDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIE
JGIcombinedJ13530_1013350491	3300001213	Wetland	MMHEQGMGHGMGVVQWHDMLTMEMWNTMSDEQKKTLMKRMVDGKILMKENWIKQFQFKIETMKMVKKMMD
JGIcombinedJ13530_1017275731	3300001213	Wetland	HEQGVHPGMMQQHDMLMMEVWNTLSEEQKKMLLKRMIDDKIMMKEGMIKHFQHKLETMKMVKNMLDKC*
SCADCLC_100526426	3300002219	Hydrocarbon Resource Environments	MMHEHGMQPGMMQQKDAVMMEMWETLTDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIETMKIIKTMLD*
JGI11641J44799_100003436	3300002961	Wetland	MMHEQGMGHGMGAMQWHDMLTMEIWNKMSDEQKKTLMKRMVDGKILMKENWIKQFQFKIETMKMVKKMLDES*
JGI20214J51088_102085372	3300003432	Wetland	MQHEMQPGMQQKDMFMMEMWENLSEAQKKTLMKRMLDSKIMMKEGMIRHFQFKIETMKMIKTMLD*
Ga0031655_102670011	3300003852	Freshwater Lake Sediment	MENRPVIRTKTGDREMMPHGMQPGMQQKDTVMMEMWEKLTDDQKKTLMKRMLDAKIMMKEGMIKHFQFKIETMKMIKTMLDKS*
Ga0031655_102886402	3300003852	Freshwater Lake Sediment	MHEQGMTPGMQQQEMLMMEMWDTLNDDQKKILMKRMLDAKIMMKEGMIKHFQFKIETFKMIKKMLDEC*
Ga0031658_10156752	3300003860	Freshwater Lake Sediment	MMHHEMQPGMQQKDMIMMEMWENLTDDQKKTLLKRMLDSKIMMKEGMIKHFQFKIETMKMIKTMLD*
Ga0031654_100065684	3300003861	Freshwater Lake Sediment	MMHGQGKGPEGMMQWQDMLMMEMWEKMTDDQKKTIMKRMVDGKVLMKENWIKQFQFKIETMKMVKKMLDES*
Ga0055513_100074002	3300004078	Natural And Restored Wetlands	MMHEQGMNPSMQQGEMLMMEMWDTLTDDQKKTLMKRSLDAKIMMKEGMIKHFQFKIETFKLIKKMLDEC*
Ga0055513_101581821	3300004078	Natural And Restored Wetlands	MGHGMGAMQWHDMLTMEIWNKMSDEQKKTLMKRMVDGKILMKENWIKQFQFKIETMKMVKKMLDE
Ga0055513_101626232	3300004078	Natural And Restored Wetlands	MHEHGMNPGMMQQQEMLMTEMWESLNDDQKKSLMKRMLDSKIMMKEGMIKHFQFKIETMKMV
Ga0071344_10732621	3300005259	Anaerobic Enrichment Culture	MQQQEMIMEEMWETLSDDQKKTLMKRMIDGKIMMKEGMIKHFQFKIETMKLIKKMLDEC*
Ga0074198_100080211	3300005323	Bioremediated Contaminated Groundwater	MNTAVSSGSRTKGDENEMHEFGMHPGMGMMQQKEMLMMEMWNTLNDDQKKILMKRMVDAKIMAKEGMIRHLQFKIETMKMLKDMLDQC*
Ga0079303_103061891	3300006930	Deep Subsurface	MHHEMQPGMQQKDMIMMEMWENLTDDQKKTLLKRMLDSKIMMKEGMIKHFQFKIETMKMIKTMLD*
Ga0075528_100311044	3300006949	Arctic Peat Soil	MQPGMMQQKDAVMMEMWENLTDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIETMKMIKTMLD*
Ga0102851_123696451	3300009091	Freshwater Wetlands	NPVPPEKRCGQTMFEHGMNPGITQHQEMVMELWDALNDDQKKILMKRILDTKIMMKEAMIRHFQFKIETFEMV*
Ga0116588_11826171	3300009304	Sediment	MMMHEHGMQPGMQQKDSVMMEMWENLTEDQKKTLMKRMLDSKIMMKEGMIQHFQFKIETMKMTKTMLDQC*
Ga0116111_100445010	3300009616	Peatland	MGGGMMQQQEMLMTEMWDALTDDQKKAMLKRALDGKIMMKKGMIEHFKFKIETFEMLKKMLDES*
Ga0116171_100357243	3300009692	Anaerobic Digestor Sludge	MMHEGGMYHEILMSEIWDTLNDDQKKTLMKRMIDAKIKMKEGMIEHFRFKIETMKMVKTMLDEC*
Ga0074046_1000099228	3300010339	Bog Forest Soil	MHEQGTGPGMMQQHEMIMAEMWDMMTDDQKKSLMKRMIDGKIMMKEGVIKHFQFKIETMKMVKKMLDEC*
Ga0153915_101756622	3300012931	Freshwater Wetlands	MMHEHGMQPGMQQKDMVMMEMWETLTEDQKKTLMKRMLDSKIMMKEGMIKHFQFKIETMRMIKEMLDAS*
Ga0153915_104763061	3300012931	Freshwater Wetlands	MHEHGMHHMGMMQQQETPMMEMWNTLSDDQKKTLMKRMVDAKIMMKEAMLKEIQFRIETMHMVRKMLDVC*
Ga0181517_105312972	3300014160	Bog	GMMQQHEMMMQEMWDSLTDDQKKTLAKRMLDGKILMKEEMIKHFQFKIETMRMIKKMLDEC*
Ga0181535_1000279919	3300014199	Bog	GYLMHEGMNPGMMQQHEMMMQEMWDSLTEDQKKTLAKRMLDGKIMMKEEMIKHFQFKIETMRLIKKMLDEC*
Ga0075358_10330612	3300014303	Natural And Restored Wetlands	MHEHGMNPGMMQQQEMLMTEMWESLNDDQKKSLMKRMLDSKIMMKEGMIKHFQFKIETMKMVKKMLDEC*
Ga0182017_100190762	3300014494	Fen	MHEHGMNPGMMQQQEMIVTEMWDSLTDDQKKTLMKRMLDTKIMMKEGMIKHLQFKIETFKMVKKMLDEC*
Ga0182011_100013206	3300014496	Fen	MHEHGMTPGMMQQQEMIMTEMWDLLTDDQKKTLMKRMLDTKIMMKEGMIKHFQFKVETFKMLKKMLDEC*
Ga0182019_109423091	3300014498	Fen	MMPEHGIHPGTTEQKEMLMMEMWNTLTDDQKKTLMKRMIDGKIMMKEGMIKHFQFKIETMKMIKTMLDKC*
Ga0182021_112119212	3300014502	Fen	MHEQGTGPGMMQQHEMIMAEMWDMMTDDQKKTLMKRMIDGKILIKEGMIKHFQFKIETMKMVRKMLDEG*
Ga0182021_112437332	3300014502	Fen	MPEHGIHPGTTEQKEMLMMEMWNTLTDDQKKTLMKRMIDGKIMMKEGMIKHFQFKIETMKMIKTMLDKC*
Ga0182021_117169512	3300014502	Fen	MMDEHGMNPGMMQQLDIMNELWDSLTDDQKKTMMKRMLDGKIMMKEGMIKHFQFKIETFKMIKKMLDES*
Ga0181536_105450052	3300014638	Bog	MQQQEMLMTEIWETLNDDQKMTLMKRMLDAKIMMKEGMIKHFQFKIETMKMVKTMLDEC*
Ga0187814_100281332	3300017932	Freshwater Sediment	MKYTMHEGMNPGMMQQEMLMTEMWDTLNDEQKKTLMKRMLDGKIMMKEGMIKHFQFKIETLKLVKKMLDEC
Ga0187786_1000014719	3300017944	Tropical Peatland	MVFVRFAGIQEMNQMIHEQGMHPGMQQGEMLMMEMWDTLTDDQKKTLMKRALDGKIMMKEGMIKHFQFKIETFKLIKKMLDEC
Ga0187782_100076713	3300017975	Tropical Peatland	MHEPEMAQQDMILTELWNMLTDEQKKTLLKRKLDGKIMIKEGLIKHFQYKIETLKMVKKMLDEC
Ga0181520_100141414	3300017988	Bog	MHEGMNPGMMQQHEMMMQEMWDSLTDDQKKTLAKRMLDGKILMKEEMIKHFQFKIETMRMIKKMLDEC
Ga0181520_100195042	3300017988	Bog	MHEQGMQQDETPMTEMWEKLTDDQKKTLMKRMLDGKIMMKEGMIKHFQFKIETLKMVKKMLDES
Ga0187810_100175073	3300018012	Freshwater Sediment	QQQGMPMTDMWETLNDDQKKILMKRMLDGKIMMKEGMIKHFQFKIETMKMIKEMLDKC
Ga0187873_10113575	3300018013	Peatland	MHEQGMNAGMMLMTDMWETLNDEQKKTLMKRMLDGKIMMKEGMIKHFQFKIETLKMVKKMLDES
Ga0187861_103117871	3300018020	Peatland	MHEQQTGPGMMQQHEMIMAGMWDMMTDDQKKALMKRMIDGKIMMKEGMIKHFQFKIETMKMVKKMLDEC
Ga0187882_10109672	3300018021	Peatland	MHEQQTGPGMMQQHEMIMAEMWDMMTDDQKKSLMKRMIDGKIMMKEGMIKHFQFKIETMKMVKKMLDEC
Ga0187889_103050032	3300018023	Peatland	MHEQQTGPGMMQQHEMIMAEMWDMMTDDQKKALMKRMIDGKIMMKEGMIKHFQFKIETMKMVKKMLDEC
Ga0187869_105452111	3300018030	Peatland	QHEMMMQEMWDSLTEDQKKTLAKRMLDGKIMMKEEMIKHFQFKIETMRLIKKMLDEC
Ga0187766_105899382	3300018058	Tropical Peatland	MIHEQGMHPGMQQGEMLMMEMWDTLTDDQKKTLMKRALDGKIMMKEGMIKHFQFKIETFKLIKKMLDEC
Ga0236338_10013303	3300022593	Freshwater	MHEHGMNPGMMQQQEMIVTEMRDLLTDDQKKTLMKRMLDTRIMMKEGMIKHLQFKIETFKMVKKMLDEC
Ga0236339_11245325	3300022650	Freshwater	MHEHGMNPGMMQQQEMIVTEMWDSLTDDQKKTLMKRMLDTKIMMKEGMIKHLQFKIETFKMVKKMLDEC
Ga0208034_10576582	3300025442	Peatland	MQPGHMGGGMMQQQEMLMTEMWDALTDDQKKAMLKRALDGKIMMKKGMIEHFKFKIETFEMLKKMLDES
Ga0209099_10274503	3300025858	Anaerobic Digestor Sludge	MMHEGGMYHEILMSEIWDTLNDDQKKTLMKRMIDAKIKMKEGMIEHFRFKIETMKMVKTMLDEC
Ga0209585_101142002	3300025891	Arctic Peat Soil	MHEHGMPSGMMQQKDAVMMEMWENLTDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0209585_102701211	3300025891	Arctic Peat Soil	MQPGMMQQKDAVMMEMWENLTDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0210146_10026862	3300025963	Natural And Restored Wetlands	MMHEQGMNPSMQQGEMLMMEMWDTLTDDQKKTLMKRSLDAKIMMKEGMIKHFQFKIETFKLIKKMLDEC
Ga0210091_10094992	3300025975	Natural And Restored Wetlands	MMHEQGMGHGMGAMQWHDMLTMEIWNKMSDEQKKTLMKRMVDGKILMKENWIKQFQFKIETMKMVKKMLDES
Ga0210092_10228571	3300025978	Natural And Restored Wetlands	MMHEQGMNPSMQQGEMLMMEMWDTLTDDQKKTLMKRSLDAKIMMKEGMIKHFQFKIETMNMIKKMLDEC
Ga0209340_10002166	3300027419	Bioremediated Contaminated Groundwater	MNTAVSSGSRTKGDENEMHEFGMHPGMGMMQQKEMLMMEMWNTLNDDQKKILMKRMVDAKIMAKEGMIRHLQFKIETMKMLKDMLDQC
Ga0208980_105965051	3300027887	Wetland	MMHHEMQPGMQQKDMIMMEMWENLTDDQKKTLLKRMLDSKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0209777_101198882	3300027896	Freshwater Lake Sediment	MENRPVIRTKTGDREMMPHGMQPGMQQKDTVMMEMWEKLTDDQKKTLMKRMLDAKIMMKEGMIKHFQFKIETMKMIKTMLDKS
Ga0209048_100754202	3300027902	Freshwater Lake Sediment	MMHGQGKGPEGMMQWQDMLMMEMWEKMTADQKKTIMKRMVDGKILMKENWIKQFQFKIETMKMVKKMIDES
Ga0209048_102120962	3300027902	Freshwater Lake Sediment	MMHGQGKGPEGMMQWQDMLMMEMWEKMTDDQKKTIMKRMVDGKVLMKENWIKQFQFKIETMKMVKKMLDES
Ga0265296_10137814	3300028032	Groundwater	MMHESGMQHGMQQQEMMMEEIWEALSDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIETMKLVKKMLDEC
Ga0265297_101532391	3300029288	Landfill Leachate	MGMMQQKEMLMMEIWDTLSDDQKKILMKRMIDMKIMMKEGLIEYFQFKIETL
Ga0265297_102928241	3300029288	Landfill Leachate	GMMQQKEMLMMEIWDTLSDDQKKILMKRMIDMKIMMKEGLIEHFQFKIETLKMVKKMLDE
Ga0311365_115161351	3300029989	Fen	PGMMQQLDIMNELWDSLTDDQKKTMMKRMLDGKIMMKEGMIKHFQFKIETFKMIKKMLDE
Ga0311336_100701874	3300029990	Fen	MMDEHGMNPGMMQQLDIMNELWDSLTDDQKKTMMKRMLDGKIMMKEGMIKHFQFKIETFKMIKKMLDES
Ga0265330_1000002536	3300031235	Rhizosphere	MHEQGAGPGMMQQHEMIMAEMWDMMTDDQKKALMKRMIDGKIMMKEGMIKHFQFKIETMKMVKKMLDEC
Ga0265330_103404931	3300031235	Rhizosphere	MHEQGMVPAMMQHHEMLMEEMWDTLNDDQKKILMKRMLDGKIQMKEGMIKHFQFKI
Ga0265316_101067062	3300031344	Rhizosphere	MMHEQGTNPMMQQQETLMMEMWDSLSDDQKKALMKRMLDGKIMMKEGMIKHFQFKIETLKMIKKMLDEG
Ga0307380_101527372	3300031539	Soil	MMHEHGMQPGMMQQKDMLMMEMWETLTDDQKKTLLKRMLDSKIMMKEGMIKHFQFKIETMRMIKSMLDAC
Ga0307379_103341821	3300031565	Soil	MDNRPASRTKTGDRQMMHEHGMQPGMMQQKDMLMMEMWETLTDDQKKTLLKRMLDSKIMMKEGMIKHFQFKIETMRMIKSMLDAC
Ga0307378_106290582	3300031566	Soil	MDNRPASRTKTGDREMMHEHGMQPGMMQQKDMLMMEMWETLTDDQKKTLLKRMLDSKIMMKEGMIKHFQFKIETMRMIKSMLDAC
Ga0315291_100624941	3300031707	Sediment	MMHGQGKGPEGMMQWQDMLMMEMWEKMTADQKKTIMKRMVDGKILMKENWIKQFQFTIETMKMVKKMIDES
Ga0302321_1029528922	3300031726	Fen	MIRSIRSSGYEGVGHTMMDEHGMNPGMMQQLDIMNELWDSLTDDQKKTMMKRMLDGKIMMKEGMIKHFQFKIETFKMIKKMLDES
Ga0315293_101164142	3300031746	Sediment	MMHGEGKGSEGMMQWQDMLMMEMWEKMTADQKKTIMKRMVDGKVLMKENWIKQFQFKIETMKMVKKMLDES
Ga0315290_102247801	3300031834	Sediment	GQGKGPEGMMQWQDMLMMEMWEKMTADQKKTIMKRMVDGKVLMKENWIKQFQFKIETMKMVKKMLDES
Ga0315290_105237581	3300031834	Sediment	MMHGQGKGPEGMMQWQDMLMMEMWEKMTDDQKKTIMKRMVDGKVLMKENWIKQFQFKIETMKMVKKMLDEC
Ga0315274_1000807714	3300031999	Sediment	MMHEQGKGSGMGMVQWQDMLMMEMWNSMSDDQKKTLMKRMIDGKIMVKEGMIKHFQFKIETMKLARKMLDEG
Ga0315274_117842252	3300031999	Sediment	GPEGMMQWQDMLMMEMWEKMTDDQKKTIMKRMVDGKVLMKENWIKQFQFKIETMKMVKKMLDES
Ga0315296_100989863	3300032020	Sediment	MMQHETQPGNQQKDMLMMEMWETLTDDQKKTLMKRMLDSKIMMKEGMIKHFQFKIETMRM
Ga0315286_118082442	3300032342	Sediment	GQGKGPEGMMQWQDMLMMEMWEKMTADQKKTIMKRMVDGKILMKENWIKQFQFKIETMKMVKKMIDES
Ga0316226_12587502	3300032562	Freshwater	VTHEHGMHPGMMKQQDMLMMEIWNALSEEQKKLLLKRMLDDKITMKESLIKHLQHKVETFKMVKNMLDKC
Ga0335070_10000001529	3300032829	Soil	MHEQGMTQHETPMIEMWEMLSDDQKKAMMKRMIDGKIMMKEGMIKHFQFKIETMKMLKKMLDEC
Ga0335070_102960492	3300032829	Soil	MQHQGMPMMQQKEMLMEELWNTLNDDQKKTLMKRMIDAKVMMKEGMIKHIQFKIETMKMVKKMLDEC
Ga0335070_118324841	3300032829	Soil	MMHEQGMNPAMMQQKEMLMTEMWETLNDDQKKVLMKRMLDGKIMMKEGMIKHFQFKIETLKMVKKML
Ga0335071_100519262	3300032897	Soil	MMHEHGMNPGMMQQQEMLMMEMWNTLNDDQKKALMKRMLDAKIMMKEGMIKHFQFKIETFKMVKKMLDEC
Ga0335071_103472812	3300032897	Soil	MMQQKEMLMEELWNTLNDDQKKTLMKRMIDAKVMMKEGMIKHIQFKIETMKMVKKMLDEC
Ga0335084_104422192	3300033004	Soil	QGEMVMMEMWDMLTDDQKKTLMKRSLDAKIMMKEGMIKHFQFKIETFKLIKKMLDEC
Ga0326728_1000005726	3300033402	Peat Soil	MQQQEMLMTEMWDALTDDQKKAMLKRALDGKIMMKKGMIEHFKFKIETFEMLKKMLDES
Ga0326728_1000015153	3300033402	Peat Soil	MEHGTRPGMGMVQQKEMLMTEIWEAISDDQKKTLLKHMLDGTIMMKEGMIRHFQFKIETLKMVKNMLDEG
Ga0326728_1000186030	3300033402	Peat Soil	MEHGTRPGMGMIQQKEMLMTEIWEALSDDQKKALLKRMLDGKIMMKEGMIKHFQFKIETLKMVKKMLDEC
Ga0326728_1000253433	3300033402	Peat Soil	MHEQGMMQQHETLMTEMWDKLNDDQKKTLMKRMLDGKIMMKEGMIKHFQFKIETLKMVKKMLDEC
Ga0326728_100093792	3300033402	Peat Soil	MHEQGMMQQHETPMIEMWEMLNDDQKKAMMKRMIDGKIMMKEGMIKHFQFKIETMKMMKKMLDEC
Ga0326728_100323472	3300033402	Peat Soil	MHEQGMMQQHETPMTEMWEKLTDEQKKTLMKRMLDGKIMMKEGMIKHFQFKIETLKMVKKMLDEP
Ga0326728_101041493	3300033402	Peat Soil	MEHGTRPGMGMMQQKEMLMTEIWEALSDDQKKALLKRMLDGKIMMKEGMIKHFQFKIDTLKMVKKMLDEC
Ga0326728_102280473	3300033402	Peat Soil	MEHGTRPGMGMVQQKEMLMTEIWEALSDDQKKTLLKHMLDGTIMMKEGMIRHFQFKIGTLKMVKKMLDEG
Ga0326728_104380202	3300033402	Peat Soil	MHGQGMMQQQEMLMTEIWETLNDDQKMTLMKRMLDAKIMMKEGMIKHFQFKIETMKMVKTMLDEC
Ga0326728_106419023	3300033402	Peat Soil	MHEQGMMQQHETPMIEMWEMLSDDQKKAMMKRMIDGKIMMKEGMIKHFQFKIETMKMLKKMLDEC
Ga0316625_1009882832	3300033418	Soil	QHEMQPGMQQKDMFMMEMWENLTEAQKKTLMKRMLDSKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0326726_1000106324	3300033433	Peat Soil	MQHEMQPGMQQHDTLMMEMWETLSEDQKKTLMKRMLDSKIMMKEGMIKHFQFKIETMKMIKTMLS
Ga0326726_104290942	3300033433	Peat Soil	MMHEHGMNPGMQQQEMLLTEMWDSLNDDQKKTLMKRMLDSKIMMKEGMIKHFEFKIETMKMVKDMLDEC
Ga0326726_107027191	3300033433	Peat Soil	MMHEHGMQPGMMQQKDAVMMEMWESLTDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0316630_111230551	3300033487	Soil	MQQKDAVMMEMWETLTDDQKKTLMKRMLDAKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0316616_1032520401	3300033521	Soil	QKDAVMMEMWETLTDDQKKTLMKRMLDAKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0326724_0139704_1308_1514	3300034091	Peat Soil	MHEGMNPGMMQQHEMMMQEMWDSLTNDQKKTLAKRMLDGKIMMKEEMIKHFQFKIETMRLIKKMLDEC
Ga0370486_018394_65_268	3300034126	Untreated Peat Soil	MHEHGMQPGMMQQKDAVMLEMWENLTDDQKKTLMKRMIDAKIMMKEGMIKHFQFKIETMKMIKTMLD
Ga0370502_0170708_126_338	3300034156	Untreated Peat Soil	MMMHDAGMQHGMVQQEMMMEEMWESLSDDQKKILMKRMIDAKIMMKEGMIKHFQFKIETMKLVKKMLDEC
Ga0370501_0319091_288_482	3300034195	Untreated Peat Soil	MQHGMQPGMEQKDMYMMAVLEKLTEEQKKTLMKRMLDSKIMMKEGMIKHLQFELETKKMIRAML

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences