Metagenome Family F087671

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087671
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	100 residues
Representative Sequence	MKVCPEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTQAEGHFDVSPRPRVFERKAWSCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRQ
Number of Associated Samples	93
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.91 %
% of genes near scaffold ends (potentially truncated)	30.00 %
% of genes from short scaffolds (< 2000 bps)	72.73 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (11.818 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.65% β-sheet: 21.71% Coil/Unstructured: 73.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01070	FMN_dh	10.00
PF05090	VKG_Carbox	4.55
PF06071	YchF-GTPase_C	3.64
PF13188	PAS_8	1.82
PF01872	RibD_C	1.82
PF07676	PD40	1.82
PF01850	PIN	1.82
PF00005	ABC_tran	1.82
PF00535	Glycos_transf_2	1.82
PF13602	ADH_zinc_N_2	1.82
PF00072	Response_reg	1.82
PF00067	p450	0.91
PF00561	Abhydrolase_1	0.91
PF08448	PAS_4	0.91
PF03160	Calx-beta	0.91
PF03631	Virul_fac_BrkB	0.91
PF04952	AstE_AspA	0.91
PF00498	FHA	0.91
PF13229	Beta_helix	0.91
PF14534	DUF4440	0.91
PF00069	Pkinase	0.91
PF02518	HATPase_c	0.91
PF13374	TPR_10	0.91
PF00881	Nitroreductase	0.91
PF08386	Abhydrolase_4	0.91
PF09360	zf-CDGSH	0.91
PF05922	Inhibitor_I9	0.91
PF13490	zf-HC2	0.91
PF13801	Metal_resist	0.91
PF11843	DUF3363	0.91
PF07617	DUF1579	0.91
PF00497	SBP_bac_3	0.91
PF00501	AMP-binding	0.91
PF13519	VWA_2	0.91
PF09852	DUF2079	0.91
PF12695	Abhydrolase_5	0.91
PF07228	SpoIIE	0.91
PF00528	BPD_transp_1	0.91
PF05050	Methyltransf_21	0.91
PF05199	GMC_oxred_C	0.91
PF00392	GntR	0.91
PF02954	HTH_8	0.91
PF09335	SNARE_assoc	0.91
PF03668	ATP_bind_2	0.91
PF00144	Beta-lactamase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	10.00
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	10.00
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.64
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	3.64
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.82
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.82
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.91
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.91
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.91
COG1404	Serine protease, subtilisin family	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG1660	RNase adaptor protein RapZ for GlmZ sRNA degradation, contains a P-loop ATPase domain	Signal transduction mechanisms [T]	0.91
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.91
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2124	Cytochrome P450	Defense mechanisms [V]	0.91
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.91
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	64.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.55 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.91 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_4424744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300003366\|JGI25321J50212_10042785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300004479\|Ga0062595_101508613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005175\|Ga0066673_10775777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005178\|Ga0066688_10031010	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300005178\|Ga0066688_10946689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300005187\|Ga0066675_11239883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005293\|Ga0065715_10630941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300005328\|Ga0070676_10268875	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300005337\|Ga0070682_100000004	All Organisms → cellular organisms → Bacteria	388780	Open in IMG/M
3300005434\|Ga0070709_10114854	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300005434\|Ga0070709_10840138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300005468\|Ga0070707_100205266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1921	Open in IMG/M
3300005471\|Ga0070698_100173407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2097	Open in IMG/M
3300005543\|Ga0070672_100000404	All Organisms → cellular organisms → Bacteria	24981	Open in IMG/M
3300005549\|Ga0070704_101635704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300005558\|Ga0066698_10051499	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300005558\|Ga0066698_10997322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005559\|Ga0066700_10240639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300005574\|Ga0066694_10498651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005575\|Ga0066702_10109877	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300005575\|Ga0066702_10118244	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300005576\|Ga0066708_10772556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005577\|Ga0068857_100038555	All Organisms → cellular organisms → Bacteria	4232	Open in IMG/M
3300005577\|Ga0068857_101680624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005615\|Ga0070702_100436555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300005615\|Ga0070702_100452496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300005719\|Ga0068861_100025396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4296	Open in IMG/M
3300005836\|Ga0074470_10852447	All Organisms → cellular organisms → Bacteria → Proteobacteria	7615	Open in IMG/M
3300006032\|Ga0066696_10209602	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300006173\|Ga0070716_100095714	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300006196\|Ga0075422_10008502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3292	Open in IMG/M
3300006237\|Ga0097621_102405926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300006800\|Ga0066660_10103813	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300006844\|Ga0075428_100498577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1303	Open in IMG/M
3300006845\|Ga0075421_100000358	All Organisms → cellular organisms → Bacteria	46115	Open in IMG/M
3300006847\|Ga0075431_100075555	All Organisms → cellular organisms → Bacteria	3477	Open in IMG/M
3300006854\|Ga0075425_102171052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300006876\|Ga0079217_10817393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300006880\|Ga0075429_100062445	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300006894\|Ga0079215_10092372	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300006894\|Ga0079215_10248583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300007004\|Ga0079218_12099169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300007004\|Ga0079218_12536338	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009093\|Ga0105240_11846092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300009100\|Ga0075418_10605263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1179	Open in IMG/M
3300009100\|Ga0075418_10838535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300009137\|Ga0066709_103082720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009137\|Ga0066709_104060627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300009147\|Ga0114129_11501286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300009649\|Ga0105855_1233933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300010044\|Ga0126310_10260824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300010335\|Ga0134063_10773187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300010336\|Ga0134071_10344066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300010403\|Ga0134123_10044354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3315	Open in IMG/M
3300010403\|Ga0134123_10177553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1790	Open in IMG/M
3300011119\|Ga0105246_11498568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300011427\|Ga0137448_1068637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300011992\|Ga0120146_1001788	All Organisms → cellular organisms → Bacteria	6980	Open in IMG/M
3300012040\|Ga0137461_1186216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300012096\|Ga0137389_10036300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3627	Open in IMG/M
3300012189\|Ga0137388_11330880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300012204\|Ga0137374_10578102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300012208\|Ga0137376_10364516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300012208\|Ga0137376_10883117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300012285\|Ga0137370_10759879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300012353\|Ga0137367_10458568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300012355\|Ga0137369_10997310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012358\|Ga0137368_10049834	All Organisms → cellular organisms → Bacteria	3564	Open in IMG/M
3300012360\|Ga0137375_10554425	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300012360\|Ga0137375_10609545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300013296\|Ga0157374_11195743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300014166\|Ga0134079_10456191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300014314\|Ga0075316_1062529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300014326\|Ga0157380_10017215	All Organisms → cellular organisms → Bacteria	5346	Open in IMG/M
3300014877\|Ga0180074_1001889	All Organisms → cellular organisms → Bacteria	3590	Open in IMG/M
3300015359\|Ga0134085_10346882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300015374\|Ga0132255_101012378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300018422\|Ga0190265_11385852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300018429\|Ga0190272_10000018	All Organisms → cellular organisms → Bacteria	151573	Open in IMG/M
3300018429\|Ga0190272_10402023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300018429\|Ga0190272_11301917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300018432\|Ga0190275_13015675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300018466\|Ga0190268_11849362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300018468\|Ga0066662_10398032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300018482\|Ga0066669_10395141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300020016\|Ga0193696_1000042	All Organisms → cellular organisms → Bacteria	57803	Open in IMG/M
3300020147\|Ga0196976_1004452	All Organisms → cellular organisms → Bacteria	4623	Open in IMG/M
3300022756\|Ga0222622_10205829	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300025907\|Ga0207645_10183580	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300025910\|Ga0207684_10120891	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300025918\|Ga0207662_10219088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300025918\|Ga0207662_10955410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300025918\|Ga0207662_11372569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300025922\|Ga0207646_10075640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3009	Open in IMG/M
3300025923\|Ga0207681_10776951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300025940\|Ga0207691_10015375	All Organisms → cellular organisms → Bacteria	7282	Open in IMG/M
3300026116\|Ga0207674_10150480	All Organisms → cellular organisms → Bacteria	2285	Open in IMG/M
3300026297\|Ga0209237_1145318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300026537\|Ga0209157_1039585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2619	Open in IMG/M
3300027640\|Ga0209347_1009051	All Organisms → cellular organisms → Bacteria → Proteobacteria	7610	Open in IMG/M
3300027909\|Ga0209382_10000729	All Organisms → cellular organisms → Bacteria	53126	Open in IMG/M
3300028578\|Ga0272482_10131369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300028828\|Ga0307312_10720314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	661	Open in IMG/M
3300031164\|Ga0307502_10023757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300031720\|Ga0307469_10529244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300031962\|Ga0307479_11398283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300032002\|Ga0307416_100330952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531	Open in IMG/M
3300032205\|Ga0307472_100182109	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300034008\|Ga0334942_001445	All Organisms → cellular organisms → Bacteria → Proteobacteria	8768	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.55%
Host-Associated	Host-Associated	25.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.00%
Plants	Host-Associated → Plants	25.45%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Sediment	Environmental → Aquatic → Sediment	4.55%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.82%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.91%
Loam	Environmental → Terrestrial → Soil → Loam	13.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Clay	Environmental → Terrestrial → Deep Subsurface → Clay	1.82%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.91%
Sand	Environmental → Terrestrial → Soil → Sand	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified	1.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.91%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.64%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.91%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300003366	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027640	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0250.00001990	2162886012	Miscanthus Rhizosphere	MKACRPHRHDHRQLPCPWPDCENNEGATDVMEIERHTGPGRMTQAEGHFDVAPAPRIFHRKQWRCEQCEATGWAWVEAGAELRLDRCPHRRTSTVRPFSRTANR
JGI25321J50212_100427851	3300003366	Deep Subsurface	MMKSCDEHKHEHRDLPCPWPDCPNSEGADDAFEVSRHTGAGKMTRAEGHFVKAPPPRKFQRAKWECEKCGAIGWTWMEEGAERRMDRCPHRKPGTVVPRR*
Ga0062595_1015086131	3300004479	Soil	MKSCPEHRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGMMTRAEGHFDVSPPPRAFERKAWTCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPYRKA*
Ga0066673_107757772	3300005175	Soil	MKSCPEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGKMTQAEGHFEVSPRPRVFERKAWNCDKCGASGWFWVEAGAEPRMDRCPHRR
Ga0066688_100310104	3300005178	Soil	MKVCAEHRHEHRQLPCPWPDCPNSEGAGDTFEVPRHAGAGKMTQAEGHFDVPPPPRKFERKQWTCPQCGVPGWSWVEIGAEPRMDRCPHRRRVTVVPRARS*
Ga0066688_109466892	3300005178	Soil	MKTCPQHRHEHQQLPCPWPDCENSEGAEEIVEVPRHAGAGRMTPAEGRFDVLPAPRVFHRKQWSCDKCPVTGWVWVEAGAELRLDR
Ga0066675_112398832	3300005187	Soil	MSGMKSCAQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVAPQPRVFERKAWSCDACGASGWFWLEAGAEPRMDRCPHRR
Ga0065715_106309412	3300005293	Miscanthus Rhizosphere	MKACRPHRHDHRQLPCPWPDCENNEGATDVMEIERHTGPGRMTQAEGHFDVAPAPRIFHRKQWRCEQCEATGWAWVEAGAELRLDRCPHRRTSTVRPFSRTANR*
Ga0070676_102688752	3300005328	Miscanthus Rhizosphere	MKSCDEHRHEHRQLPCPWPDCPNGEGASDVLEVPRHSGAGQMTRVEGHFDVPPPPRVFERKAWSCDKCGGTGWFWVEAGAEAKLDRCPHRRAGTVKPRRRDLHSK*
Ga0070682_100000004299	3300005337	Corn Rhizosphere	MKSCEQHRHEHRQLPCPWPDCPNGEGAADLFEVPRHTGAGMMTRAEGHFDVTPQPRKFERKMWTCEKCGVSGWHWVEAGVDPHLDRCPHRRPGTVKPLRKA*
Ga0070709_101148542	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTSGMKLCAEHHHEHRQLPCPWPDCPNGEGAGDTVRVPRHAGAGMMTRAEGHFDVSPAPRVFERKQWHCEKCGASGWSWVEAGAERPMDRCPHRRPRTVKPRGRQT*
Ga0070709_108401381	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTSEMKSCAEHRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGMMTRAEGHFEVSPRPRVFERKAWTCDKCGATGWSWVEAGAELRTDRCPH
Ga0070707_1002052663	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKSCAQHRHEHRQLPCPWPDCPNNEGAGELVEVPRHTGAGMMTRAEGHFDVLPGPRVFERKAWNCDKCGMTGWFWVEAGAEPRLDRCPHRRPGTVKPLRRA*
Ga0070698_1001734073	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTGMKVCEEHRHEHRQLPCPWPDCPNSEGAADRVEVPRHTGAGKMTRDEGHFDVPPPPRVFDRKMWTCDKCGATGWSWVEAGAERRVDRCPHRRSVSVTPRART*
Ga0070672_10000040421	3300005543	Miscanthus Rhizosphere	MKSCEQHRHEHRQLPCPWPDCPNGEGAPDLFEVPRHTGAGMMTRAEGHFDVSPRPRAFERKGWTCEKCGVSGWAWVEVGAEPRIDRCPHRRTPTVTPLRRT*
Ga0070704_1016357041	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	HEHRQLPCPWPDCPNGEGAADVFEVPRHTGAGMMTAAEGHFEVAPQPRVFERKAWTCDKCGVTGWAWVEGGAEPRLDRCPHRRPGTVKPLRRT*
Ga0066698_100514993	3300005558	Soil	MKVCAEHRHEHRHLPCPWPDCANSEGAGDTFEVPRHAGAGKMTQAEGHFDVPPPPRKFERRQLRCPQCGVPGWSWVEIGAEPRMDRCPHRRRVTVVPRARS*
Ga0066698_109973221	3300005558	Soil	MKTCPEHRHQHRQLPCPWPDCPHGEGAADITEVPRHTGAGKMTRAEGHFDVPPPPRTFHRKSWTCDKCGAVGWAWVESGAEP
Ga0066700_102406394	3300005559	Soil	MKVCAEHRHEHRQLPCPWPDCPNSEGAGDTFEVPRHAGAGKMTQAEGHFDVPPPPRKFERKQWTCPQCGVPGWSWVEIGAEPRMDRCP
Ga0066694_104986512	3300005574	Soil	HRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTQAEGHFEVSPRPRVFERKAWSCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRQ*
Ga0066702_101098772	3300005575	Soil	MKSCPEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGKMTQAEGHFEVSPRPRVFERKAWSCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRQ*
Ga0066702_101182442	3300005575	Soil	MKVCAEHRHEHRQLPCPWPDCPNSEGAGDTFEVPRHSGAGKMTQAEGHFEVAPPPRRFERKQWTCPQCGVPGWSWVEVGAEPRMDRCPHRRRVTVVPRARS*
Ga0066708_107725561	3300005576	Soil	MSGMKSCAQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVAPRPRVFERKAWNCDACGASGWFWLEAGAEPRMDRCPHRRPGTVKPLRRA*
Ga0068857_1000385554	3300005577	Corn Rhizosphere	MKTCEEHNHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGMMTRAEGHFDVAPRPRVFERKAWTCDKCGVTGWSWVESGAESRLDRCPHRRPSTVKPLRRS*
Ga0068857_1016806241	3300005577	Corn Rhizosphere	MKTCEQHRHEHRQLPCPWPDCPNGEGAPDLFEVARHTGAGRMTRAEGHFDVSPRPRAFERKGWTCDKCGASGWAWVEVGAEPRIDRC
Ga0070702_1004365552	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTVVKSCEEHRHEHRQLPCPWPDCPNGEGAADRLEVPRHTGPGMMTPAEGNFEVAPAPRVFERKGWTCDKCDATGWAWVESGAEPRMDRCPHRRASTVQPRRRA*
Ga0070702_1004524962	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKTCTEHRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGRMTRAEGHFEVSPRPRVFERKAWSCDKCGASGWFWVEAGAEPPLDRCPHRRPGTVKPRRR*
Ga0068861_1000253966	3300005719	Switchgrass Rhizosphere	MKACTEHRHEHRQLPCPWPDCPNNEGAGDTFDAPRHSGAGKMTAAEGHFDVPPPPRRFERKRWDCDQCGASGWAWVETGAERRADRCPHRRSATVVPRARR*
Ga0074470_108524476	3300005836	Sediment (Intertidal)	MKTCDEHRHEHRQLPCPWPDCPNNEGAAETLEIPRHAGAGMMTRAEGHFDVAPAARVFHRKAWSCEKCDATGWFWVQEGAEPRLDRCPHRRPGTVKPVRSI*
Ga0066696_102096022	3300006032	Soil	MKVCPEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTQAEGHFDVSPRPRVFERKAWSCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRQ*
Ga0070716_1000957142	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKSCAEHRHEHRQLPCPWPDCPNGEGASDLLEVPRHTGAGMMTRAEGHFEVSPRPRVFERKAWTCDKCGATGWSWVEAGAELRTDRCPHRRPSTVQPLRRA*
Ga0075422_100085024	3300006196	Populus Rhizosphere	MKTCEQHRHEHRDLPCPWPDCPNGEGAAETTEVPRHEGAGRMTQAEGHFESAPAPRVFQRRQWTCDKCSATGWVWVEAGAELRLDRCPHRRPGTVRPRGNARATS*
Ga0097621_1024059261	3300006237	Miscanthus Rhizosphere	MKTCEQHRHEHRQLPCPWPDCPNNEGAADVFEVPRHTGAGAMTPAEGNFEVSPKPRVFERQAWTCDKCDASGWSWVEAGAEPRLDRCPHRRPGTVKPLRRA*
Ga0066660_101038133	3300006800	Soil	MKVCAEHRHEHRQLPCPWPDCPNSEGAGDTFEVPRHSGAGKMTQAEGHFEVAPPPRRFERKQWTCPQCGVPGWSWVEIGAEPRMDRCPHRRRVTVVPRARS*
Ga0075428_1004985772	3300006844	Populus Rhizosphere	MKICEQHRHEHRDLPCPWPDCPNGEGAAETTEVPRHEGAGRMTRAEGHFESSPAPRVFQRQQWICDKCSATGWAWVEAGAELRMDRCPHRRPGTVRPRGNVRAAS*
Ga0075421_10000035846	3300006845	Populus Rhizosphere	MDMKTCDEHRHEHRQLPCPWPDCANGEGAADTIEVPRHTGAGQMTKAEGHFDRLPAPRVFHRTPWNCDKCGASGWTWLEAGAEPHLDRCPHRRPGTVRPKGNVRPAR*
Ga0075431_1000755553	3300006847	Populus Rhizosphere	MKTCDEHRHEHRQLPCPWPDCANGEGAADTIEVPRHTGAGQMTKAEGHFDRLPAPRVFHRTPWNCDKCGASGWTWLEAGAEPHLDRCPHRRPGTVRPKGNVRPAR*
Ga0075425_1021710521	3300006854	Populus Rhizosphere	LTAMKTCAQHRHEHRQLPCPWPDCENSEGAKEIVEVPRHAGAGKMTPAEGRFDVLPAPRVFHRKQWSCDKCPVTGWVWVEAGAELRLDRCPHRRAV
Ga0079217_108173931	3300006876	Agricultural Soil	MKECAEHKHEHRQLPCPWPGCPNGEGASDTFEVPRHQGAGQMTRAEGHFDVAPGARVFERTLWKCDKCGASGWQWVESGAKPTLDRCPHRRPGTVKPRGRG*
Ga0075429_1000624454	3300006880	Populus Rhizosphere	MKICEQHRHEHRDLPCPWPDCPNGEGATDTTEVPRHEGAGRMTQAEGHFESSPAPRVFQRKQWTCEKCGASGWAWVEAGAELRMDRCPHRRPGTVRPRGNVRAAS*
Ga0079215_100923723	3300006894	Agricultural Soil	MKTCPQHRHEHRDLPCPWPDCPEGENATDTTEVARHGGAGRMTQAEGHFEVAPAPRVFQRTAWNCDKCGATGWAWVETGAEPRM
Ga0079215_102485831	3300006894	Agricultural Soil	DRNETLMKTCAVHRHEHRQLPCPWPDCENAEGATEKMEVPRHSGAGQMTRAEGHFDVSPPPRVFQRQRWNCDKCSATGWFWVESGAEARLDRCPHRRAGTVKPRVRT*
Ga0079218_120991692	3300007004	Agricultural Soil	MSDSMSNGMKTCELHRHEHRDLPCPWPDCPHGEGAADTTEVARHTGAGRMTRAEGHFDVSPAPRVFERTPWDCDKCEASGWSWVEVGAEPRMDRCPHRRSKTVWPRGSIRVTR*
Ga0079218_125363382	3300007004	Agricultural Soil	MKTCPQHRHEHRDLACPWPDCENGEKATDRFEVARHSGEGVTRVFQRTAWNCEKCGATGWAWVEEGAEPRMDRCPHRRPATVRPRGHPRSTPVKA*
Ga0105240_118460922	3300009093	Corn Rhizosphere	MKTCEQHRHEHRQLPCPWPDCPNGEGAADLFEVPRHTGAGMMTRAEGHFDVSPRPRAFERKEWRCEKCGASGWSWVEAGAEPRIDRCPHRRPGTVTPLRKG*
Ga0075418_106052631	3300009100	Populus Rhizosphere	MKECRAHRHDHRQLPCPWPDCENSEGAADVLEIERHTGAGRMTQAEGHFDVAPAPRIFHRKQWRCDQCDATGWAWVEAGAELRLDRCPHRRTSTVRPFSRTSNR*
Ga0075418_108385352	3300009100	Populus Rhizosphere	MKICEQHRHEHRDLPCPWPDCPNGEGAAETTEVPRHEGAGRMTRAEGHFESSPAPRVFQRKQWTCDKCGASGWAWVEAGAELRMDRCPHRRPGTVRPRGNVRAAS*
Ga0066709_1030827202	3300009137	Grasslands Soil	KASQMSGMKSCAQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVAPQPRVFERKAWSCDACGASGWFWLEAGAEPRMDRCPHRRPGTVKPLRRA*
Ga0066709_1040606271	3300009137	Grasslands Soil	MKSCPQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGKMTQAEGHFEVSPRPRVFERKAWNCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRQ*
Ga0114129_115012862	3300009147	Populus Rhizosphere	MKSCEVHRHEHRQLPCPWPDCPHGEGASDVVEVPRHTGAGMMTRAEGHFDVAPQPRVFERKAWTCDKCGVTGWAWVEGGAEPRLDRCPHRRPGTVKPLRRDR*
Ga0105855_12339332	3300009649	Permafrost Soil	MMKTCAEHRHEHRQLPCPWPDCPNNEGAADAVEIPRHAGAGRMTPAEGHFDVLPAPRVFHRKSWSCDKCGGSGWAWVEAEAVPRLDRCPHR
Ga0126310_102608242	3300010044	Serpentine Soil	QLPCPWPDCPNNEGAAELTEVPRHAGAGSMTRAEGHFDVFPAPRVFRRTEWNCDKCGASGWVWVEAGAEPRMDRCPHRRAVTVQPRPKR*
Ga0134063_107731871	3300010335	Grasslands Soil	MSGMKSCAQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAQGHFDVAPQPRVFERKAWSCDACGASGWFWLEAGAEPRMDRCPHRRPGTVKPLRRA*
Ga0134071_103440662	3300010336	Grasslands Soil	MKSCAEHRHEHRQLPCPWPDCANNEGAADLLEVPRHTGAGRMTQAEGHFEVSPRPRVFERKAWTCDACGASGWFWVEAGAEPRMDRCPHRRSGTVKPLRRQ*
Ga0134123_100443542	3300010403	Terrestrial Soil	MKTCVEHRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGRMTRAEGHFEVSPRPRVFERKAWSCDKCGASGWFWVEAGAEPPLDRCPHRRPGTVKPRRR*
Ga0134123_101775532	3300010403	Terrestrial Soil	MKTCTEHRHEHRQLPCPWPDCANGEGAGDTFDAPRHTGAGQMTAAEGHFDVPPPPRRFERKRWDCDQCGAFGWAWVEAGAERRMDRCPHRRAATVTPRARR*
Ga0105246_114985681	3300011119	Miscanthus Rhizosphere	HRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGMMTRAEGHFDVSPRPRVFERKAWTCDKCGATGWSWVEAGAELRMDRCPHRRPSTVQPLRRA*
Ga0137448_10686371	3300011427	Soil	MKICEQHRHEHRDLPCPWPDCPNSEGATETTEVPRHEGAGRMTQAEGHFESSPAPRVFQRQQWICDKCSATGWAWVEAGAELRLDRCPHRRPSTVRPRGNARAAS*
Ga0120146_10017884	3300011992	Permafrost	MKTCAEHRHEHRQLPCPWPDCPNNEGAADSVEIPRHAGAGRMTPAEGHFDVLPAPRVFHRRSWGCDKCGGSGWAWVEADAVPRLDRCPHRRPGTVKPLARA*
Ga0137461_11862161	3300012040	Soil	PDCPNGEGAAEMTEVARHEGAGRMTRAEGHFESAPAPRVFQRQQWTCDKCSASGWAWVEAGAELRMDRCPHRRPGTVRPRGSVRAAS*
Ga0137389_100363002	3300012096	Vadose Zone Soil	MKTCIAHHHEHRQLPCPWPDCPNNESATDTMEVPRHAGAGMMTRAEGHFDVSPPPRVFHRKLWECDKCRTTGWAWVEAGAEPRMDRCPHRRPGTVKPLGRT*
Ga0137388_113308801	3300012189	Vadose Zone Soil	MKTCIAHHHEHRQLPCPWPDCPNNESATDTMEVPRHAGAGMMTRAEGHFDVSPPPRVFHRKLWECDKCRTTGWAWVEAGAEPRM
Ga0137374_105781022	3300012204	Vadose Zone Soil	MRDGAPRISGSMRSGMRSGMKVCAEHRHEHRQLPCPWPDCPNSEGAADTIEVPRHTGAGRMTRAEGHFDVLPAPRMFERKSWACDKCGASGWAWVEAGAEPRLDRCPHRRPS
Ga0137376_103645161	3300012208	Vadose Zone Soil	MKICAEHRHEHRQLPCPWPDCPNSEGATDTFEVPRHTGAGKMTRAEGHFEVAPAPRMFKRKSWTCDKCGATGWVWVEAGAEPTV
Ga0137376_108831172	3300012208	Vadose Zone Soil	MKVCAEHRHEHRNLPCPWPGCVNSEGAGAAFEVPRHTGAGKMTQAEGHFDVAPPPRKFERKQWTCEQCGVSGWAWVEIGAEPRVDRCPHRRRVTVVPRART*
Ga0137370_107598792	3300012285	Vadose Zone Soil	PWPGCVNSEGAGAAFEVPRHTGAGKMTQAEGHFDVAPPPRKFERKQWTCEQCGVSGWAWVEIGAEPRVDRCPHRRRVTVVPRART*
Ga0137367_104585682	3300012353	Vadose Zone Soil	MKICAEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVLPAPRAFERKGWSCDKCGASGWFWVEAGVEPRLDRCPHRRPGTVKPFRKA*
Ga0137369_109973101	3300012355	Vadose Zone Soil	MKSCPQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTQAEGHFDVSPRPRVFERKAWSCDKCGASGWFWVEAGVEPRLDRCPH
Ga0137368_100498342	3300012358	Vadose Zone Soil	MSGMKSCAEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVSPRPRIFERKSWSCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRA*
Ga0137375_105544252	3300012360	Vadose Zone Soil	MSGMKSCAEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVSPRPRIFERKSWSCDKCGASGWFWVEAGAEARMDRCPHRRPGTIKPFRRA*
Ga0137375_106095452	3300012360	Vadose Zone Soil	MKICAEHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVLPAPRAFERKGWSCDKCGASGWFWVEAGMEPRLDRCPHRRPGTVKPFRKA*
Ga0157374_111957431	3300013296	Miscanthus Rhizosphere	MDAKSMKSCEQHRHEHRQLPCPWPDCPNGEGAGDLFEVPRHTGAGRMTRAEGHFDVAPRPRAFDRKAWTCDKCGASGWSWVEQGAEQRMDRCPHRR
Ga0134079_104561912	3300014166	Grasslands Soil	MSGMKSCAQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGRMTRAEGHFDVAPQPRVFERKAWSCDACGASGWFWLEAGAEPRMDRCPHRRPGTVKPLRRA*
Ga0075316_10625291	3300014314	Natural And Restored Wetlands	MKVCAEHHHEHRNLPCPVPDCANSEGAGDTFEVPRHTGAGKMTAAEGHFEVAPPPRRFERKKWTCKHCGVSGWAWVEHGGEPRIDRCPHRRRVTV
Ga0157380_100172154	3300014326	Switchgrass Rhizosphere	MKTCEQHRHEHRQLPCPWPDCPNGEGAADLFEVPRHTGAGMMTRAEGHFDVSPRPRAFERKGWTCDKCGASGWAWVEVGAEPRVDRCPHRRTPTVTPLRRA*
Ga0180074_10018894	3300014877	Soil	MKTCEEHRHEHRQLPCPWPDCEKGEGAADSIEVPRHTGAGRMTQSEGHFDQFPAPRVFHRTPWNCDKCGASGWTWLEAGAQPHLDRCPHRRPGTVRPRGNVRSGR*
Ga0134085_103468821	3300015359	Grasslands Soil	KVCAEHRHEHRQLPCPWPDCPNSEGAADTIEVPRHTGAGKMTRAEGHFDVSPPPRAFERKAWTCDKCGASGWFWVEVGAEPRLDRCPHRRPGTVKPFRKA*
Ga0132255_1010123781	3300015374	Arabidopsis Rhizosphere	MKTCPHHRHEHRQLPCPWPDCENGEAAPEIVEVPRHTGAGKMTPAEGNFDVVPAPRVFHRKQWSCDKCSVTGWVWVEAGAELRPDRCPHRRAVTVKPIDRR*
Ga0190265_113858522	3300018422	Soil	MKTCDIHRHEHRDLPCPWPDCPNSEGATERTEVTRHTGAGKMTRAEGHFDVAPQPRVFERKPWVCDKCDVTGWWWVEVGAEPHLDRCPHRRHKTVWPRGNTRAAK
Ga0190272_1000001836	3300018429	Soil	MKTCEIHRHEHRDLPCPWPDCPAGEGAADTTNIARHSGAGKMTRAEGHFETAPAPRVFHRTAWTCDKCDATGWSWVEAGGEPRLERCPHRRPKTVWPRGNTRAG
Ga0190272_104020231	3300018429	Soil	MAAMKSCIAHRHEHRQLPCPWPDCENSESAGEVFEVPRHAGAGAMTQAEGRFDVAPAPRVFHRKQWTCDKCPVTGWAWVEAGAEPRMDRCPHRRAATVKPIERR
Ga0190272_113019172	3300018429	Soil	MKSCDTHKHEHRDLPCPFPDCPNGEGATDTMEVLRHTGAGKMTHAEGHFDVAPKPRTFERKPWNCELCGAGGWSWVEAGGEPRMDRCPHRRPKTVWPRGNARAAK
Ga0190275_130156751	3300018432	Soil	MKSCDTHRHEHRDLPCPWPDCPNNEGATATMEIQRHTGAGKMTHAEGHFDVAPKPRVFERTPWSCDLCDAAGWSWVEAGGEPRMDRCPHRRAATVKPIE
Ga0190268_118493622	3300018466	Soil	MRTAMKTCDTHRREHRDLPCPWPDCPNNEGATDRTEVARHTGAGMMTRAEGHFDEKPAPRVFQRTRWTCDKCDATGWSWVEVGAEPRLERCPHRRPKTVWPRGNTRAAG
Ga0066662_103980322	3300018468	Grasslands Soil	MKVCAEHRHEHRQLPCPWPDCPNSEGAGDTFEVPRHAGAGKMTQAEGHFDVPPPPRKFERKQWTCPQCGVPGWSWVEIGAEPRMDRCPHRRRVTVVPRARS
Ga0066669_103951411	3300018482	Grasslands Soil	RHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGKMTQAEGHFEVSPRPRVFERKAWNCDKCGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRQ
Ga0193696_100004240	3300020016	Soil	MKTCEQHRHEHRQLPCPWPDCPNGEGAADLFEVPRHTGAGAMTRAEGHFDVSPRPRAFERKGWTCDKCGASGWSWVEVGAEPRIDRCPHRRPGTVTPLRRV
Ga0196976_10044524	3300020147	Soil	MTTCTDHRHDHRQLPCPWPDCPNSEGAGDTFEVPRHTGAGRMTRDEGHFDEPPPPRRFERQRWTCDQCEVSGWSWVEAGAERRMDRCPHRRASTVTPRSRTPA
Ga0222622_102058292	3300022756	Groundwater Sediment	MKSCEQHRHEHRQLPCPWPDCPSGEGAADVLEVPRHTGAGMMTRAEGHFDVSPKPRVFERKEWNCDKCGVSGWSWVEVGAEVRLDRCPHRRPGTVKPLRRT
Ga0207645_101835802	3300025907	Miscanthus Rhizosphere	MKSCDEHRHEHRQLPCPWPDCPNGEGASDVLEVPRHSGAGQMTRVEGHFDVPPPPRVFERKAWSCDKCGGTGWFWVEAGAEAKLDRCPHRRAGTVKPRRRDLHSK
Ga0207684_101208912	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKSCETHRHEHRQLPCPWPDCPNGEGAADLFEVPRHTGAGMMTRAEGHFDVSPRPRAFERKQWTCDKCGASGWSWVEKGAEPRMDRCPHRRPGTVTPLRRA
Ga0207662_102190881	3300025918	Switchgrass Rhizosphere	EHRQLPCPWPDCPNGEGAADRLEVPRHTGPGMMTPAEGNFEVAPAPRVFERKGWTCDKCDATGWAWVESGAEPRMDRCPHRRASTVQPRRRA
Ga0207662_109554101	3300025918	Switchgrass Rhizosphere	KTCAEHRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGRMTRAEGHFEDSPRPRVFERKAWSCDKCGASGWFWVEAGAEPPLDRCPHRRPGTVKPRRR
Ga0207662_113725691	3300025918	Switchgrass Rhizosphere	MKTCAEHRHEHRDLPCPTPGCENSEGAGDVVEVSRHQGAGRMTPAEGRFEVAPQPRVFHRQQWTCDKCPKTGWFWVEAGAVPRADRCPHRRTGTVVP
Ga0207646_100756403	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKSCAQHRHEHRQLPCPWPDCPNNEGAGELVEVPRHTGAGMMTRAEGHFDVLPGPRVFERKAWNCDKCGMTGWFWVEAGAEPRLDRCPHRRPGTVKPLRRA
Ga0207681_107769511	3300025923	Switchgrass Rhizosphere	MKTCAEHRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGRMTRAEGHFEDSPRPRVFERKAWSCDKCGASGWFWVEAGAEPPLDRCPHRRPGTVKPRRR
Ga0207691_100153756	3300025940	Miscanthus Rhizosphere	MKSCEQHRHEHRQLPCPWPDCPNGEGAPDLFEVPRHTGAGMMTRAEGHFDVSPRPRAFERKGWTCEKCGVSGWAWVEVGAEPRIDRCPHRRTPTVTPLRRT
Ga0207674_101504802	3300026116	Corn Rhizosphere	MKTCEEHNHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGMMTRAEGHFDVAPRPRVFERKAWTCDKCGVTGWSWVESGAESRLDRCPHRRPSTVKPLRRS
Ga0209237_11453181	3300026297	Grasslands Soil	MKVCAEHRHEHRQLPCPWPDCANSEGAGDTFEVPRHAGAGKMTQVEGHFDVPPPPRKFERKQWTCPQCGVPGWSWVEIGAKPRMDRCPHRRRVTVVPRARS
Ga0209157_10395853	3300026537	Soil	MKVCAEHRHEHRHLPCPWPDCANGEGAGDTFEVPRHAGAGKMTQAEGHFDVPPPPRKFERRQLTCPQCGVPGWSWVEIGAEPRMDRCPHRRRVTVVPRARS
Ga0209347_10090514	3300027640	Deep Subsurface	MMKSCDEHKHEHRDLPCPWPDCPNSEGADDAFEVSRHTGAGKMTRAEGHFVKAPPPRKFQRAKWECEKCGAIGWTWMEEGAERRMDRCPHRKPGTVVPRR
Ga0209382_1000072934	3300027909	Populus Rhizosphere	MKTCDEHRHEHRQLPCPWPDCANGEGAADTIEVPRHTGAGQMTKAEGHFDRLPAPRVFHRTPWNCDKCGASGWTWLEAGAEPHLDRCPHRRPGTVRPKGNVRPAR
Ga0272482_101313691	3300028578	Soil	MKTCEIHRHEHRDLPCPWPDCPNGEGAADRTEVARHTGAGRMTQAEGHFESSPAPRVFERKPWNCDVCGATGWSWVEIGAEPRMDRCPHRRPKTVWPRGNVRAAR
Ga0307312_107203141	3300028828	Soil	EHHHEHRQLPCPWPDCPNNEGATDTFEVPRHAGAGKMTRAEGHFDVSPPPRVFERKKWDCDKCSASGWAWVEAGAEPRMDRCPHRRPGTVKPLGRG
Ga0307502_100237571	3300031164	Soil	MKSCDTHRHEHRHLPCPWPDCPNGEGAADRTEIARHAGAGQMTRDEGHFDVAPAPRLFDRKPWECELCGATGWSWVEVGAQPRMDRCPHRRTQTVWPRGNARAAPK
Ga0307469_105292442	3300031720	Hardwood Forest Soil	MKTCAEHRHEHRQLPCPWPDCPNGEGAADTTEVPRHAGAGQMTRAEGHFDVLPAPRVFHRTPWDCDKCGARGWAWVEAGAETRLDRCPHRRPGTVKPLRRT
Ga0307479_113982832	3300031962	Hardwood Forest Soil	MKSCAQHRHEHRQLPCPWPDCPNGEGAADLLEVPRHTGAGRMTPAEGHFDVLPPPRIFERKGWSCDQCGVSGWSWVEAGAEPRLDRCPHRRPGTVKPLRRG
Ga0307416_1003309521	3300032002	Rhizosphere	METMKACPQHRHEHRQLPCPWPDCENGEAAPDLVEVPRHMGAGKMTRDEGRFEVAPAPRVFHRKQWTCELCPVTGWAWVEAGATPRM
Ga0307472_1001821093	3300032205	Hardwood Forest Soil	MKSCPQHRHEHRQLPCPWPDCPNNEGAADLLEVPRHTGAGMMTQAEGHFEVSPRPRVFERKAWTCDACGASGWFWVEAGAEPRMDRCPHRRPGTVKPFRRQ
Ga0334942_001445_6116_6445	3300034008	Biocrust	MSAAMKTCDIHRHEHRDLPCPWPDCANGEGAADTTHIERHSGAGRMTVAEGHFETAPAPRIFHRTAWNCDKCEATGWSWVEAGAEPRLERCPHRRPKTVWPRGNARAPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087671

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences