NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F085666

Metagenome / Metatranscriptome Family F085666

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085666
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 56 residues
Representative Sequence MGERASNIFPFGIAVVLPPAGLLLGLLNLQQEKRDLGIRLIVVSLLAAVVWVLLFVG
Number of Associated Samples 98
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.70 %
% of genes near scaffold ends (potentially truncated) 7.21 %
% of genes from short scaffolds (< 2000 bps) 66.67 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.685 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(24.324 % of family members)
Environment Ontology (ENVO) Unclassified
(39.640 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.946 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 60.00%    β-sheet: 0.00%    Coil/Unstructured: 40.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF07992Pyr_redox_2 26.13
PF03449GreA_GreB_N 9.91
PF02148zf-UBP 9.01
PF007253HCDH 4.50
PF01272GreA_GreB 2.70
PF12681Glyoxalase_2 2.70
PF14864Alkyl_sulf_C 2.70
PF00313CSD 1.80
PF13560HTH_31 1.80
PF00801PKD 1.80
PF00378ECH_1 1.80
PF01435Peptidase_M48 1.80
PF027373HCDH_N 1.80
PF02604PhdYeFM_antitox 1.80
PF00561Abhydrolase_1 0.90
PF14378PAP2_3 0.90
PF00070Pyr_redox 0.90
PF13407Peripla_BP_4 0.90
PF13540RCC1_2 0.90
PF02790COX2_TM 0.90
PF12823DUF3817 0.90
PF13417GST_N_3 0.90
PF01625PMSR 0.90
PF06737Transglycosylas 0.90
PF13450NAD_binding_8 0.90
PF03706LPG_synthase_TM 0.90
PF01850PIN 0.90
PF00115COX1 0.90
PF00058Ldl_recept_b 0.90
PF06790UPF0259 0.90
PF01966HD 0.90
PF02771Acyl-CoA_dh_N 0.90
PF01035DNA_binding_1 0.90
PF13336AcetylCoA_hyd_C 0.90
PF01063Aminotran_4 0.90
PF05532CsbD 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 12.61
COG5207Uncharacterized Zn-finger protein, UBP-typeGeneral function prediction only [R] 9.01
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 6.31
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 1.80
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.80
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.80
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.80
COG0115Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyaseAmino acid transport and metabolism [E] 1.80
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 1.80
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 1.80
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 1.80
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 1.80
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 0.90
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 0.90
COG1622Heme/copper-type cytochrome/quinol oxidase, subunit 2Energy production and conversion [C] 0.90
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.90
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 0.90
COG3695Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domainTranscription [K] 0.90
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 0.90

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.68 %
UnclassifiedrootN/A15.32 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908041|P3_CLC_ConsensusfromContig95621All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Plesiocystis → Plesiocystis pacifica → Plesiocystis pacifica SIR-1653Open in IMG/M
3300000546|LJNas_1006238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1293Open in IMG/M
3300000858|JGI10213J12805_10679946Not Available559Open in IMG/M
3300001161|JGI12135J13285_100631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1982Open in IMG/M
3300001213|JGIcombinedJ13530_105853223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1146Open in IMG/M
3300001537|A2065W1_11050802Not Available603Open in IMG/M
3300002568|C688J35102_118084144All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300004061|Ga0055487_10000010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia16553Open in IMG/M
3300004081|Ga0063454_100952317All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300004643|Ga0062591_100465534All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300005339|Ga0070660_101925881Not Available504Open in IMG/M
3300005340|Ga0070689_100210380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1591Open in IMG/M
3300005341|Ga0070691_10000004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales80156Open in IMG/M
3300005356|Ga0070674_100563495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria958Open in IMG/M
3300005366|Ga0070659_100265832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1424Open in IMG/M
3300005367|Ga0070667_100068631All Organisms → cellular organisms → Bacteria3017Open in IMG/M
3300005438|Ga0070701_10278870All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300005458|Ga0070681_11655381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium566Open in IMG/M
3300005530|Ga0070679_101131700Not Available728Open in IMG/M
3300005535|Ga0070684_100143343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2162Open in IMG/M
3300005546|Ga0070696_101311747All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300005549|Ga0070704_101792565All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005564|Ga0070664_101622619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium613Open in IMG/M
3300005841|Ga0068863_100008832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia9842Open in IMG/M
3300006038|Ga0075365_10731410All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300006580|Ga0074049_12541987All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300006853|Ga0075420_101735930All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300006854|Ga0075425_100097335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3342Open in IMG/M
3300006854|Ga0075425_101466615All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300009101|Ga0105247_11533139All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300009147|Ga0114129_11686791All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300009176|Ga0105242_10000063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales74721Open in IMG/M
3300009400|Ga0116854_1071470Not Available1749Open in IMG/M
3300009789|Ga0126307_10711312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium810Open in IMG/M
3300009840|Ga0126313_10252204All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300009840|Ga0126313_10682059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium831Open in IMG/M
3300010037|Ga0126304_10554136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria773Open in IMG/M
3300010045|Ga0126311_10027469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3465Open in IMG/M
3300010045|Ga0126311_10072898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2283Open in IMG/M
3300010371|Ga0134125_10148815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2608Open in IMG/M
3300010375|Ga0105239_11355377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales821Open in IMG/M
3300011119|Ga0105246_10448520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1083Open in IMG/M
3300012212|Ga0150985_118590834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1211Open in IMG/M
3300012469|Ga0150984_104286178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1337Open in IMG/M
3300012668|Ga0157216_10071809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1701Open in IMG/M
3300012900|Ga0157292_10000006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria118494Open in IMG/M
3300012912|Ga0157306_10000232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10863Open in IMG/M
3300012937|Ga0162653_100004654All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300012943|Ga0164241_10003123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia17114Open in IMG/M
3300012943|Ga0164241_10004508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia13442Open in IMG/M
3300012960|Ga0164301_10344586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1022Open in IMG/M
3300013306|Ga0163162_10404613All Organisms → cellular organisms → Bacteria1497Open in IMG/M
3300013308|Ga0157375_10030090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5115Open in IMG/M
3300013308|Ga0157375_10454213All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300013308|Ga0157375_10993158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria979Open in IMG/M
3300013772|Ga0120158_10274724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei → Conexibacter woesei DSM 14684829Open in IMG/M
3300014270|Ga0075325_1000375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album7394Open in IMG/M
3300014295|Ga0075305_1011167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1428Open in IMG/M
3300014325|Ga0163163_10494789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1284Open in IMG/M
3300014326|Ga0157380_10001343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia16023Open in IMG/M
3300014745|Ga0157377_10514392All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300015064|Ga0167641_105025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1791Open in IMG/M
3300015158|Ga0167622_1063608Not Available617Open in IMG/M
3300015371|Ga0132258_12817188All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300017792|Ga0163161_10088739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2286Open in IMG/M
3300018073|Ga0184624_10289808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales734Open in IMG/M
3300018469|Ga0190270_10319593All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300018469|Ga0190270_11162777All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300018476|Ga0190274_10013095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5222Open in IMG/M
3300018476|Ga0190274_12601709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium603Open in IMG/M
3300018481|Ga0190271_10000013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia178071Open in IMG/M
3300019767|Ga0190267_11329333All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300019884|Ga0193741_1003469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4360Open in IMG/M
3300019889|Ga0193743_1001890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia15113Open in IMG/M
3300020034|Ga0193753_10372224All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300021339|Ga0193706_1000372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria27171Open in IMG/M
3300021339|Ga0193706_1052557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1142Open in IMG/M
3300021363|Ga0193699_10085403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1261Open in IMG/M
3300021415|Ga0193694_1001063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3956Open in IMG/M
3300021519|Ga0194048_10185706Not Available773Open in IMG/M
3300022756|Ga0222622_11045549All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300025904|Ga0207647_10252799All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300025919|Ga0207657_10785843Not Available736Open in IMG/M
3300025921|Ga0207652_11321544Not Available624Open in IMG/M
3300025934|Ga0207686_10000124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria62335Open in IMG/M
3300025936|Ga0207670_10142256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1770Open in IMG/M
3300025937|Ga0207669_10741480All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300025945|Ga0207679_10128408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium2030Open in IMG/M
3300025946|Ga0210126_100018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales13554Open in IMG/M
3300025986|Ga0207658_10094669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2325Open in IMG/M
3300026051|Ga0208911_1000051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album6921Open in IMG/M
3300026075|Ga0207708_10299425Not Available1308Open in IMG/M
3300026088|Ga0207641_10006453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia9884Open in IMG/M
3300027257|Ga0208996_1044689All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300027524|Ga0208998_1000008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia116202Open in IMG/M
3300027761|Ga0209462_10205311All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300028802|Ga0307503_10000008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria344079Open in IMG/M
3300028802|Ga0307503_10463285All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300028819|Ga0307296_10748747Not Available533Open in IMG/M
3300030619|Ga0268386_10097179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2281Open in IMG/M
3300031184|Ga0307499_10026574All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300031184|Ga0307499_10057320All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300031229|Ga0299913_10731814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum966Open in IMG/M
3300032144|Ga0315910_10000003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1167230Open in IMG/M
3300032156|Ga0315295_11617150Not Available621Open in IMG/M
3300032164|Ga0315283_10521787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1290Open in IMG/M
3300032177|Ga0315276_12191253Not Available560Open in IMG/M
3300034128|Ga0370490_0213740Not Available634Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil24.32%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.50%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.60%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.60%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.60%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.70%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.70%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.70%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.70%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.80%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.90%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.90%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.90%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.90%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.90%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.90%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.90%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908041Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
3300000546Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300001161Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004061Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009400Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014270Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1EnvironmentalOpen in IMG/M
3300014295Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015064Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7B, Adjacent to main proglacial river, mid transect (Watson river))EnvironmentalOpen in IMG/M
3300015158Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021415Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1EnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025946Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026051Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027257Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027524Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027761Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300034128Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P3_CLC_016735702124908041SoilMRTRANTIFPFAIAVVLPPAGLVVALFAAVEDRNLGLRIGVVAVLAAAVWAFLLL
LJNas_100623833300000546Quercus RhizosphereMGERASTLFPFGIAVVLPPAGVLLGLLNIQQGQRDLGMRLIAVSLLAAIVWVLLFVV*
JGI10213J12805_1067994623300000858SoilVSERLAGLFPFLIAVVLPPAGVLLGLVEMKQDRELGIRLIVVSLLAAVVWLLLFFV*
JGI12135J13285_10063133300001161Forest SoilMGERASTLFPFGIAVVLPPAGLLLGLLNLQQEDREQGIRLILVSLLAAMVWVLLFVG*
JGIcombinedJ13530_10585322333300001213WetlandVSSRASTLLPFAIAVLLPPAGLLLGLAELKQDRELGLRLIAVALLAALVWVLLFVG*
A2065W1_1105080233300001537PermafrostMRARANTIFPFAIAVVLPPAGLVVALFAAVEDRNLGLRIGVVAVLAAAVWAFLLL*
C688J35102_11808414423300002568SoilMGDWIPKAFPFAIAVVLPPAGLILGFAAMQENRDLGLRVMAVAVLAAFVWGLLFFS*
Ga0055487_10000010123300004061Natural And Restored WetlandsVSERIAGAFPFAIAVVLPPAGLMLGLVELRQDREQGIRLLVVSVLAAVVWALLLVG*
Ga0063454_10095231723300004081SoilMGERASRIFPFAIGVVLPPAGLILGLAAMQEDRELGLRIIGVSLLAAVIWALLFLA*
Ga0062591_10046553423300004643SoilMGDWIPKAFPFAIAVVLPPAGLIVGLAAMQEDRELGLRVIAVAVLAAVVWALLFLG*
Ga0070660_10192588113300005339Corn RhizospherePFAIAVLLPPAGLILGLAALQKDRELGIRLMAVAVLAAVVWLLLFVG*
Ga0070689_10021038013300005340Switchgrass RhizosphereVASRASTLFPFAIAVLLPPAGLILGLAALQKDRELGIRLIAVAALAAVVWVLLFVG*
Ga0070691_10000004143300005341Corn, Switchgrass And Miscanthus RhizosphereMGERASSLFPFGIAVVLPPAGVLLGLLNIQQGERDLGMRLIAVSLLAAIVWVLLFVV*
Ga0070674_10056349523300005356Miscanthus RhizosphereMGDWIPKAFPFAIAVVLPPAGLVLGLAALQEDRELGLRVMAVAVLAAVVWVLLFLA*
Ga0070659_10026583223300005366Corn RhizosphereVANRASAFFPFAIAVLLPPAGLILGLAALQKDRELGIRLMAVAVLAAVVWLLLFVG*
Ga0070667_10006863143300005367Switchgrass RhizosphereMGERASTLFPFGIAIVLPPAGLLLGLLNMQQENRVLGIRLILTSLVAAVVWVLLFVG*
Ga0070701_1027887013300005438Corn, Switchgrass And Miscanthus RhizosphereVGERASQLFPFGIAVVLPPAGLILGLLNLQQGNKDLGTRLIVVSALAAVVWVLLFTA*
Ga0070681_1165538123300005458Corn RhizosphereMGDWIPKAFPFAIAVVLPPAGLIIGLAALQENRELGLLVIAVAVLAAVVW
Ga0070679_10113170023300005530Corn RhizosphereMGDWIPKAFPFAIAVVLPPAGLIIGLAALQENRELGLLVIAVAVLAAVVWLLLFIG*
Ga0070684_10014334313300005535Corn RhizosphereMGDWIPKVFPFAIAVVLPPAGLVLGLAALQEDREMGMRVVAVAVLAAVVWVLLFLA*
Ga0070696_10131174723300005546Corn, Switchgrass And Miscanthus RhizosphereVASRASTLFPFAIAVLLPPAGLILGLAALQKDRELGIRLLAVAVLAAVVWVLLFVG*
Ga0070704_10179256523300005549Corn, Switchgrass And Miscanthus RhizosphereMGDWIPKAFPFAIAVVLPPAGLILGLAAMQENRELGLRVMAVAVLAAVVWVLLFLG*
Ga0070664_10162261923300005564Corn RhizosphereMGERATSLFPFGIAVVLPPAGVLLGLLEFLQHDREQGMRLIAVSLLAAIVWVLLFVV*
Ga0068863_10000883253300005841Switchgrass RhizosphereMGERASTLFPFGIAVVLPPAGLLLGLLNIQQENRALGIRLILVSLLAAVVWVLLFVG*
Ga0075365_1073141023300006038Populus EndosphereMGDWIPKAFPFAIAVVLPPAGLIVGLAAIQQDRELGLRVITVAVLAAGAW
Ga0074049_1254198713300006580SoilMGERASNLFPFGIAVVLPPAGLLLGLLNIQQENRELGVRLILVSVLAAVVWVLLFVG*
Ga0075420_10173593023300006853Populus RhizosphereMGERLSEILPFAIAVLLPPAGVLLGLVEMREDRELGIRLLVVAVLAAVVWALLFVS*
Ga0075425_10009733553300006854Populus RhizosphereVGERASQLFPFGIAVVLPPAGLLIGLLNLQQDNKDLGTRLIVVSVLAAIVWVLLFTA*
Ga0075425_10146661523300006854Populus RhizosphereMGDWIPKAFPFAIAVVLPPAGLIIGLAALKEDRELGLRVIAVAVLAAVVWVLLFLG*
Ga0105247_1153313913300009101Switchgrass RhizosphereMGDWIPKAFPFAIAVVLPPAGLILGLAALQEDRELGLRVIAVAVLAAVVWLLLFLG*
Ga0114129_1168679113300009147Populus RhizosphereMGDWIPKAFPFAIAVVLPPAGLILGLAALQEDRELGLRLIAVAVLAAVVWVLLFLA*
Ga0105242_10000063553300009176Miscanthus RhizosphereMGERASTLFPFGIAVVLPPAGLLLGLLNLQQEKRELGIRLILTSVLAAVVWVLLFVG*
Ga0116854_107147013300009400SoilVRARASAIFPFAIAVFLPPAGLLLGLAALAQNERDMGIRLVVVAVLAAAVWAALLLSK*
Ga0126307_1071131223300009789Serpentine SoilMAGMGDWIPRLFPFAIAIVLPPAGLILGLAALNEDRELGLRVIAVAAIAAVVWILLFLG*
Ga0126313_1025220433300009840Serpentine SoilMEERIPTLFPFGIAVVLPPAGVLLGLLNVQQGQRDLGMRLIAVSLLAAIVWVLLFVV*
Ga0126313_1068205913300009840Serpentine SoilMGERASTLFPFGIAVVLPPAGLLLGLLNLQQENREQGIRLILVSLLAAVIWVLL
Ga0126304_1055413623300010037Serpentine SoilMSDRLAGIFPFVIAVLLPPAGLLLGLVELRQDRELGIRLLAVAVLAAVVWTLLFAG*
Ga0126311_1002746923300010045Serpentine SoilMGDWIPRLFPFAIAIVLPPAGLILGLAALSEDRELGLRVIAVAALAAIVWALLFLA*
Ga0126311_1007289833300010045Serpentine SoilMGERAEEFFPFVIAVILPPAGLFLGLFNLKDERDLAIRLIVVSVLAAVVWAFLFLA*
Ga0134125_1014881543300010371Terrestrial SoilMGERASTLFPFGIAVVLPPAGLLLGILNLLQDNRVLGIRLILVSLLAAVIWVLLFVG*
Ga0105239_1135537723300010375Corn RhizosphereVGERASNLFPFGIAVVLPPAGLLLGLLNLQQENRELGIRLIGVSVLAAVVWVLLFVG*
Ga0105246_1044852023300011119Miscanthus RhizosphereMAGIFPFAIAVLLPPAGLILGLAALQKDRELGIRLMAVAALAAVVWVLLFVG*
Ga0120159_104703323300012014PermafrostMNRRATEIFPFAIAVVIPPAGLLIGLLQLTQEDRNTGVRIIVVALLAAVVWILLLTR*
Ga0150985_11859083423300012212Avena Fatua RhizosphereMGDWIPKAFPFAIAVVLPPAGLILGFAAMQENRDLGLRVMAVAVLAAFVWGLLFFA*
Ga0150984_10428617823300012469Avena Fatua RhizosphereMGDWIPKAFPFAIAVVLPPAGLILGFAAMQENRDLGLRVMAVAVLAAFVWGLLFLS*
Ga0157216_1007180933300012668Glacier Forefield SoilMKERANVIFPFAIACVLPPAGLFLGLAALENDRDLGIRLMVVSVLAAAVWVFAVLTLQG*
Ga0157292_100000061083300012900SoilVGKRASSLFPFGIAVVLPPAGLILGLLNIQQNDRELGIRLIAVSVLAAVVWVLLFVA*
Ga0157306_1000023283300012912SoilVGKRMAGILPFAIAVLLPPAGLILGLAALQQDRELGIRVIVVALLAAVVWVLLFVA*
Ga0162653_10000465433300012937SoilMGERLSEILPFAIAVLLPPAGVLLGLVELRQDRELGIRLLVVALLAAVVWTLLFVS*
Ga0164241_1000312363300012943SoilMGERLSGVFPFAIAVVLPPAGLLLGLVEMREDRELGIRLIVVSVLAAAVWTLLFVA*
Ga0164241_1000450823300012943SoilVSDRLAAIFPFAIAVVLPPAGLLLGVVEMRQDRELGIRLIVVSVLAAVVWTLLFVA*
Ga0164301_1034458623300012960SoilMGDRLSAIFPFAIAVVLPPAGLLLGLVEMRQDRDLGIRLVVVSVLAAVVWTLLFVA*
Ga0163162_1040461333300013306Switchgrass RhizosphereVGERASNLFPFGIAVVLPPAGILLGLLNLQQENRVLGIRLILTSLVAAVVWVLLFVG*
Ga0157375_1003009063300013308Miscanthus RhizosphereMGERANSLFPFGIAVVLPPAGVLLGLLNVQQGARDLGMRLIAVSLLAAIVWVLLFVA*
Ga0157375_1045421323300013308Miscanthus RhizosphereMGERATSLFPFGIAVVLPPAGFLLGILNLLQDNRVLGIRLILVSLLAAVVWVLLFVG*
Ga0157375_1099315833300013308Miscanthus RhizosphereMGERASTLFPFGIAIVLPPAGVLLGLLNVQQGQRDLGMRLIAVSLLAAIVWVLLFI*
Ga0120158_1021213513300013772PermafrostIFPFPIAVVTPPAGLLIGLLQLTQEDRNTGVRIIIVALLAAVVWTLLLTR*
Ga0120158_1027472413300013772PermafrostLPFGIAVVLPPAGLILGIVGVLQVDRGLGTRLIVVALCAAAVWAFLVTA*
Ga0075325_100037523300014270Natural And Restored WetlandsVGERLSEILPFAIAVLLPPAGVLLGLVELRQDRELGIRLLVVALLAAVVWALLFLS*
Ga0075305_101116723300014295Natural And Restored WetlandsVSDRLPGIFPFAIAVLLPPAGLLLGAVELRQDREQGIRLLVVSVLAAVVWTLLFVG*
Ga0163163_1049478923300014325Switchgrass RhizosphereMGDWIPKAFPFAIAVVLPPAGLIIGLAALQEDRELGLRVIAVAVLAAVVWLLLFIG*
Ga0157380_1000134333300014326Switchgrass RhizosphereMSDRLAGIFPFVIAVLLPPAGLLLGLVELRQDRELGIRLLTVAVLAAIVWTLLFVG*
Ga0157377_1051439223300014745Miscanthus RhizosphereVGERASTLFPFGIAVVLPPAGLLLGLLNIQQENRALGVRLILVSLLAAVVWVLLFVG*
Ga0167641_10502533300015064Glacier Forefield SoilMGERASTFFPFGIAVVLPPAGLLLGLLNIQQEKRELGIRLIVVSLLAAVVWVLLFVG*
Ga0167622_106360813300015158Glacier Forefield SoilVRARASAIFPFAIAVFLPPAGLLLGLAALTQNERDLGIRLMIVAVLAAAVWVALLSSG*
Ga0132258_1281718833300015371Arabidopsis RhizosphereMGERASSLFPFGIAVVLPPAGVLLGLLNVQQGDRDQGMRLVAVSLLAAIVWVLLFVV*
Ga0163161_1008873933300017792Switchgrass RhizosphereMGERASTLFPFGIAVVLPPAGFLLGLLNLQQENRVLGIRLILTSLVAAVIWVLLFVG
Ga0184624_1028980823300018073Groundwater SedimentMGERASTLFPFGIAIVLPPAGLLLGLLNIQQDNRDLGLRLIAVSVLSAVVWVLLFVG
Ga0190270_1031959343300018469SoilMGENASRIFPFAIAVILPPAGLIMGIAGMREDRELGRRIVVVSILAAVVWLLLLLA
Ga0190270_1116277723300018469SoilMGERASQIFPFGIAVVLPPAGLILGLLNIQQGEKDLGTRLIAVSILAAVVWVLLFTT
Ga0190274_1001309553300018476SoilVGERASKVFPFAIAVVLPPAGLVLGLAATQQDRDLGIRLIVVSVLAAVVWALLFLA
Ga0190274_1260170923300018476SoilMGERLSAIFPFVIAVVLPPAGLLLGLVEMRQDRDLGIRLVVVAVLAAVVWTLLFVG
Ga0190271_100000131143300018481SoilMGESASRILPFAIAVILPPAGLIMGIAGMREDRELGRRIVLVSILAAVVWLLLLLA
Ga0190267_1132933323300019767SoilMKEQANSVFPFAIACILPPAGLVLGLFALEEDRDLGIRLIVVALVAAAIWLWLLL
Ga0193741_100346943300019884SoilVGERLSGILPFLIAVLLPPAGVLLGLVELRQDRDLGTRLIVVAVLAAVVWVLLFVS
Ga0193743_1001890163300019889SoilMGERASNLFPFGIAIVLPPAGLILGLLNIQQENRDLGVRLIVVSLLAALVWVLLFVA
Ga0193753_1037222413300020034SoilMGERASNIFPFGIAVVLPPAGLLLGLLNLQQEKRDLGIRLIVVSLLAAVVWVLLFVG
Ga0193706_1000372203300021339SoilMGERATSLFPFGIAIVLPPAGLLLGLLNLQQEDRVLGIRLILTSLLAAVVWVLLFVG
Ga0193706_100972253300021339SoilMGKALGTYIPFILAVLLPPVGLLLGLIGLQEDRQLGIRLIVVALLAAVVWALIFVG
Ga0193706_105255733300021339SoilVGERASNLFPFGIAVVLPPAGLLLGLLNIQQDQRDLGIRLIVVSILAAVVWVLLFVA
Ga0193699_1008540323300021363SoilVGERATSLFPFGIAVVLPPAGLLLGLLNMQQENRELGIRLILVSVLSAVVWVLLFVG
Ga0193694_100106343300021415SoilVGERASTLFPFGIAIVLPPAGVILGMLNFLQGERELGMRLVAVSLLAAIVWVLLFVV
Ga0194048_1018570613300021519Anoxic Zone FreshwaterSERANAIFPFAIAVVLPPAGLLLGLLALTQEDRGVAIRLIVVSLLAAVVWLALLV
Ga0222622_1104554913300022756Groundwater SedimentMMGDWIPKAFPFAIAVVLPPAGLIVGLAALQQDKELGTRVIVVAVLAAVVWVLLFLG
Ga0207647_1025279923300025904Corn RhizosphereVANRASAFFPFAIAVLLPPAGLILGLAALQKDRELGIRLMAVAVLAAVVWLLLFVG
Ga0207657_1078584323300025919Corn RhizosphereRRSWARVGPVANRASAFFPFAIAVLLPPAGLILGLAALQKDRELGIRLMAVAVLAAVVWLLLFVG
Ga0207652_1132154413300025921Corn RhizosphereMGDWIPKAFPFAIAVVLPPAGLIIGLAALQENRELGLLVIAVAVLAAVVWLLLFIG
Ga0207686_1000012463300025934Miscanthus RhizosphereMGERASTLFPFGIAVVLPPAGLLLGLLNLQQEKRELGIRLILTSVLAAVVWVLLFVG
Ga0207670_1014225633300025936Switchgrass RhizosphereVASRASTLFPFAIAVLLPPAGLILGLAALQKDRELGIRLIAVAALAAVVWVLLFVG
Ga0207669_1074148023300025937Miscanthus RhizosphereMGDWIPKAFPFAIAVVLPPAGLVLGLAALQEDRELGLRVMAVAVLAAVVWVLLFLA
Ga0207679_1012840833300025945Corn RhizosphereMGDWIPKVFPFAIAVVLPPAGLVLGLAALQEDREMGMRVVAVAVLAAVVWVLLFLA
Ga0210126_10001853300025946Natural And Restored WetlandsVSERIAGAFPFAIAVVLPPAGLMLGLVELRQDREQGIRLLVVSVLAAVVWALLLVG
Ga0207658_1009466933300025986Switchgrass RhizosphereMGERASTLFPFGIAIVLPPAGLLLGLLNMQQENRVLGIRLILTSLVAAVVWVLLFVG
Ga0208911_100005173300026051Natural And Restored WetlandsVGERLSEILPFAIAVLLPPAGVLLGLVELRQDRELGIRLLVVALLAAVVWALLFLS
Ga0207708_1029942533300026075Corn, Switchgrass And Miscanthus RhizosphereVANRASTLFPFAIAVLLPPAGLILGLAALQKDRELGLRLTAVAALAALVWVLLFVG
Ga0207641_1000645383300026088Switchgrass RhizosphereMGERASTLFPFGIAVVLPPAGLLLGLLNIQQENRALGIRLILVSLLAAVVWVLLFVG
Ga0208996_104468923300027257Forest SoilVGERASNLFPFGIAIVLPPAGLLLGLLNIQQQKRDLGIRLVVVSLLAAAVWVLLFVG
Ga0208998_1000008383300027524Forest SoilMGERASTLFPFGIAVVLPPAGLLLGLLNLQQEDREQGIRLILVSLLAAMVWVLLFVG
Ga0209462_1020531123300027761AgaveVSDRLAGIFPFVIAVLLPPAGLLLGLVEVRQDRELGIRLIVVAVLAAVVWTLLFVS
Ga0307503_100000081833300028802SoilVGERASSLFPFGIAVVLPPAGLILGLLNIQQDDRELGFRLIAVSVLAAIVWVLLFVA
Ga0307503_1046328523300028802SoilVGERASKIFPFAIAVVLPPAGLVLGLAATQQDRDLGIRLIVVSVLAAVVWALLFLV
Ga0307296_1074874723300028819SoilMRARATAVFPFAIAVFLPPAGLLLGLVQYTQEDRDLGVRLIVVAAIASAVWALLLLSL
Ga0268386_1009717933300030619SoilVGQLASDIYPYAIAVLLPPAGLILGLVALDEERGLGLRLIGVALLAGMVWSLVLLG
Ga0307499_1002657423300031184SoilMGERAGSLFPFGIAIVLPPAGVLIGLLNIQQGDRDQGMRLIAVALLAAIVWVLLFVV
Ga0307499_1005732023300031184SoilMSERLSALFPFAIAVFLPPAGLILGLAELREDRTLGARLIVVSLLAALVWVLLFAG
Ga0299913_1073181423300031229SoilMGANAPRLIPFAIAVVLPPAGLILGLLQLTQEDRVLGLRIIVVSILAAVIWVWLFTG
Ga0315910_10000003463300032144SoilVGQRASQLFPFGIAVVLPPAGLIIGLLNLQQGNRDLGTRLIVVSVLAAVVWALLFAA
Ga0315295_1161715023300032156SedimentMLDRANAIFPFAIAILLPPAGLLLGLLQLTQEDRDLAVRLIVVSLLAAAVWALLLL
Ga0315283_1052178723300032164SedimentVPTDSLDPMLDRANAIFPFAIAILLPPAGLLLGLLQLTQEDRGLAVRLIVVSLLAAAAWALLLL
Ga0315276_1219125323300032177SedimentLRVPTDSLDPMLDRANAIFPFAIAILLPPAGLLLGLLQLTQEDRDLAVRLIVVSLLAAAVWALLLL
Ga0370490_0213740_410_5803300034128Untreated Peat SoilVGERLSEILPFAIAVLLPPAGVLLGLVELRQDRELGIRLLVVALLAAVVWVLLFLS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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