Metagenome / Metatranscriptome Family F085052

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085052
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	95 residues
Representative Sequence	MSEPTLQQEIEARRPATEGTLQQIASVYIDSVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG
Number of Associated Samples	49
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.28 %
% of genes near scaffold ends (potentially truncated)	27.03 %
% of genes from short scaffolds (< 2000 bps)	92.79 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.360 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion (57.658 % of family members)
Environment Ontology (ENVO)	Unclassified (99.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (62.162 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.47% β-sheet: 0.00% Coil/Unstructured: 17.53%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05133	Phage_prot_Gp6	14.41
PF09693	Phage_XkdX	8.11
PF01522	Polysacc_deac_1	1.80
PF10475	Vps54_N	0.90
PF14265	DUF4355	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.97 %
Unclassified	root	N/A	27.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.36 %
Unclassified	root	N/A	27.03 %
Viruses	superkingdom	All Organisms → Viruses	12.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.36 %
Unclassified	root	N/A	27.03 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.85 %
Unclassified	root	N/A	27.03 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.80 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	46.85 %
Unclassified	root	N/A	27.03 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.80 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	31.53 %
Unclassified	root	N/A	27.03 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.80 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.80 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	27.93 %
Unclassified	root	N/A	27.03 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.80 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.90 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.03 %
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	19.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.21 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	0.90 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.90 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.03 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	19.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.21 %
unclassified Oscillospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Salipaludibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Salipaludibacillus	0.90 %
unclassified Bacteroidales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales	0.90 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.03 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	19.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.21 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	0.90 %
Salipaludibacillus aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Salipaludibacillus → Salipaludibacillus aurantiacus	0.90 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111016\|draft_c203792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	509	Open in IMG/M
2209111016\|draft_c206919	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	509	Open in IMG/M
2209111016\|draft_c768696	Not Available	505	Open in IMG/M
2209111016\|draft_c77616	Not Available	508	Open in IMG/M
2209111018\|Meso_c1092690	Not Available	525	Open in IMG/M
2209111018\|Meso_c1187313	Not Available	511	Open in IMG/M
3300000482\|Lynggard_1006476	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1013	Open in IMG/M
3300000510\|Foulum_1022094	All Organisms → Viruses → Predicted Viral	1345	Open in IMG/M
3300001975\|Draft_10279620	Not Available	520	Open in IMG/M
3300001975\|Draft_11092690	Not Available	529	Open in IMG/M
3300001975\|Draft_11187313	Not Available	515	Open in IMG/M
3300002163\|JGI24707J26582_10155986	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300002163\|JGI24707J26582_10159833	Not Available	613	Open in IMG/M
3300002166\|JGI24713J26584_10035056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1397	Open in IMG/M
3300002166\|JGI24713J26584_10050139	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1013	Open in IMG/M
3300002166\|JGI24713J26584_10085471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	644	Open in IMG/M
3300002166\|JGI24713J26584_10094412	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300002167\|JGI24714J26587_10034301	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1563	Open in IMG/M
3300002167\|JGI24714J26587_10046493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1170	Open in IMG/M
3300002167\|JGI24714J26587_10053957	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1015	Open in IMG/M
3300002168\|JGI24712J26585_10078169	Not Available	1214	Open in IMG/M
3300002168\|JGI24712J26585_10091083	Not Available	1061	Open in IMG/M
3300002168\|JGI24712J26585_10148115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	705	Open in IMG/M
3300002168\|JGI24712J26585_10194930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	567	Open in IMG/M
3300002170\|JGI24711J26586_10178944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	514	Open in IMG/M
3300002170\|JGI24711J26586_10186178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	500	Open in IMG/M
3300002173\|JGI24709J26583_10116785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	826	Open in IMG/M
3300002293\|JGI24504J29685_1016832	Not Available	566	Open in IMG/M
3300002293\|JGI24504J29685_1016833	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300002376\|JGI24505J29691_1033746	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300002376\|JGI24505J29691_1051217	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300002376\|JGI24505J29691_1056124	Not Available	501	Open in IMG/M
3300002377\|JGI24500J29687_10042044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	720	Open in IMG/M
3300002377\|JGI24500J29687_10045555	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300002377\|JGI24500J29687_10055960	Not Available	836	Open in IMG/M
3300002377\|JGI24500J29687_10055961	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300002377\|JGI24500J29687_10057539	Not Available	612	Open in IMG/M
3300002378\|JGI24502J29692_10024378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	782	Open in IMG/M
3300002378\|JGI24502J29692_10029546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1200	Open in IMG/M
3300002378\|JGI24502J29692_10034130	Not Available	558	Open in IMG/M
3300002378\|JGI24502J29692_10034131	Not Available	671	Open in IMG/M
3300002378\|JGI24502J29692_10038774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	672	Open in IMG/M
3300002378\|JGI24502J29692_10039100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	691	Open in IMG/M
3300002378\|JGI24502J29692_10047616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1956	Open in IMG/M
3300002378\|JGI24502J29692_10088426	All Organisms → Viruses → Predicted Viral	3016	Open in IMG/M
3300002378\|JGI24502J29692_10149229	Not Available	568	Open in IMG/M
3300002391\|JGI24501J29690_1020915	Not Available	562	Open in IMG/M
3300002391\|JGI24501J29690_1036249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	602	Open in IMG/M
3300002391\|JGI24501J29690_1045428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	615	Open in IMG/M
3300002391\|JGI24501J29690_1103512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	546	Open in IMG/M
3300002392\|JGI24503J29689_10027359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	776	Open in IMG/M
3300002392\|JGI24503J29689_10048141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	823	Open in IMG/M
3300002392\|JGI24503J29689_10055654	Not Available	769	Open in IMG/M
3300002392\|JGI24503J29689_10060771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1130	Open in IMG/M
3300002392\|JGI24503J29689_10067779	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300002392\|JGI24503J29689_10077277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Salipaludibacillus → Salipaludibacillus aurantiacus	1363	Open in IMG/M
3300002392\|JGI24503J29689_10100073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	570	Open in IMG/M
3300002392\|JGI24503J29689_10188684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	787	Open in IMG/M
3300002406\|JGI24499J29688_1009254	Not Available	580	Open in IMG/M
3300002406\|JGI24499J29688_1009255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	677	Open in IMG/M
3300002406\|JGI24499J29688_1013029	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300002406\|JGI24499J29688_1014194	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300002406\|JGI24499J29688_1014357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	527	Open in IMG/M
3300002406\|JGI24499J29688_1018951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	705	Open in IMG/M
3300002406\|JGI24499J29688_1027492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	889	Open in IMG/M
3300002406\|JGI24499J29688_1039235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	508	Open in IMG/M
3300002898\|draft_10460286	Not Available	574	Open in IMG/M
3300003306\|Ga0004534J46558_1007018	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300003306\|Ga0004534J46558_1022514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	556	Open in IMG/M
3300005835\|Ga0078910_131292	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1638	Open in IMG/M
3300009095\|Ga0079224_103045323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	668	Open in IMG/M
3300009653\|Ga0116169_1105777	Not Available	1003	Open in IMG/M
3300009658\|Ga0116188_1029397	All Organisms → Viruses → Predicted Viral	2791	Open in IMG/M
3300009663\|Ga0116181_1255451	Not Available	639	Open in IMG/M
3300009667\|Ga0116147_1353112	Not Available	547	Open in IMG/M
3300009668\|Ga0116180_1039934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2362	Open in IMG/M
3300009668\|Ga0116180_1301725	Not Available	599	Open in IMG/M
3300009712\|Ga0116165_1285732	Not Available	532	Open in IMG/M
3300009761\|Ga0116168_1140510	Not Available	627	Open in IMG/M
3300010338\|Ga0116245_10033235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3806	Open in IMG/M
3300010340\|Ga0116250_10118803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1711	Open in IMG/M
3300010340\|Ga0116250_10123817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1667	Open in IMG/M
3300010340\|Ga0116250_10298412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	955	Open in IMG/M
3300010347\|Ga0116238_10438139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	840	Open in IMG/M
3300014206\|Ga0172377_11471463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	511	Open in IMG/M
3300015214\|Ga0172382_10902478	Not Available	595	Open in IMG/M
3300019203\|Ga0179955_1194014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	814	Open in IMG/M
3300019218\|Ga0179954_1054414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	962	Open in IMG/M
3300019227\|Ga0179956_1138411	All Organisms → Viruses → Predicted Viral	1926	Open in IMG/M
3300019227\|Ga0179956_1256403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1346	Open in IMG/M
3300019235\|Ga0179952_1082937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	794	Open in IMG/M
3300019243\|Ga0179953_1135307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1125	Open in IMG/M
3300019243\|Ga0179953_1301100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	1169	Open in IMG/M
3300025589\|Ga0209409_1088442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	800	Open in IMG/M
3300025609\|Ga0209608_1134242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	599	Open in IMG/M
3300025609\|Ga0209608_1138705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	584	Open in IMG/M
3300025613\|Ga0208461_1018468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3097	Open in IMG/M
3300025618\|Ga0208693_1142278	Not Available	618	Open in IMG/M
3300025629\|Ga0208824_1034525	All Organisms → Viruses → Predicted Viral	2012	Open in IMG/M
3300025638\|Ga0208198_1044260	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1633	Open in IMG/M
3300025638\|Ga0208198_1119080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	750	Open in IMG/M
3300025657\|Ga0208823_1186150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	545	Open in IMG/M
3300025683\|Ga0208564_1070652	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1230	Open in IMG/M
3300027510\|Ga0209537_1017781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3500	Open in IMG/M
3300027510\|Ga0209537_1035671	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300027510\|Ga0209537_1035712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1805	Open in IMG/M
3300027510\|Ga0209537_1050469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	1294	Open in IMG/M
3300027510\|Ga0209537_1054083	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300027510\|Ga0209537_1092711	Not Available	727	Open in IMG/M
3300027510\|Ga0209537_1100275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	676	Open in IMG/M
3300029822\|Ga0134854_1008183	All Organisms → Viruses → Predicted Viral	4720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	99.10%
Environmental	Environmental	0.90%

Habitat	Taxonomy	Distribution
Biotransformation	Engineered → Biotransformation	57.66%
Wastewater	Engineered → Wastewater	27.03%
Solid Waste	Engineered → Solid Waste	9.91%
Bioreactor	Engineered → Bioreactor	3.60%
Terrestrial	Environmental → Terrestrial	0.90%
Unclassified	Engineered → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	57.66%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	27.03%
Grass	Engineered → Solid Waste → Grass	5.41%
Landfill	Engineered → Solid Waste → Landfill	4.50%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.80%
Soil	Environmental → Terrestrial → Soil	0.90%
Unclassified	Engineered → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Bioreactor → Unclassified	0.90%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	57.66%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	27.03%
Composting	Engineered → Solid Waste → Grass → Composting	5.41%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	4.50%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.90%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.90%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	57.66%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	27.03%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	5.41%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	4.50%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	57.66%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	27.03%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	5.41%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	2.70%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	1.80%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.90%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	0.90%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	0.90%
Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Biogas Reactor	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111016	Thermophilic bioreactor microbial communities at WVSU, USA	Engineered	Open in IMG/M
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300000482	Anaerobic digester microbial communities from Northern Denmark, sample from Lynggard manure	Engineered	Open in IMG/M
3300000510	Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manure	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002293	Biogas fermentation microbial communities from Germany - Plant 4 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002376	Biogas fermentation microbial communities from Germany - Plant 4 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002377	Biogas fermentation microbial communities from Germany - Plant 2 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002391	Biogas fermentation microbial communities from Germany - Plant 2 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002406	Biogas fermentation microbial communities from Germany - Plant 1 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300005835	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 1 to 3 kb reads	Engineered	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009653	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009667	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009712	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG	Engineered	Open in IMG/M
3300009761	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG	Engineered	Open in IMG/M
3300010338	AD_JPMRca	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010347	AD_JPHGca	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019203	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR2_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019218	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019227	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019235	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR1_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019243	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR2_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025589	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025609	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025613	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025629	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025638	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
draft_2037922	2209111016	Solid Waste From Bioreactor	MSESTLLQEIEARRPATEGTLRQMASIYIDSAAIIASAQAMMESVEQIFADTETAMSALKSVVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG
draft_2069192	2209111016	Solid Waste From Bioreactor	TEGTLRQMASIYIDSAAIIASAQAMMESVEQIFADTETAMSALKSVVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG
draft_7686961	2209111016	Solid Waste From Bioreactor	MSEPTLQQEIEARRPATEGTLQKLASVYIDSAAIMASAQAMMESVEQIFADTETVMNSLKSAVETAELAMLSAKESMDSAKTAFEGIMVDEGVDL
draft_776162	2209111016	Solid Waste From Bioreactor	MSESTLLQEIEARRPATGGTLRQMASIYIDSAAIIASAQAMMESVEQIFADTETAMSALKSVVETAELAMLSAKESMDSAKTAFDGIMVDEGWIEWLKAYR
Meso_10926902	2209111018	Solid Waste From Bioreactor	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFADTETAMSALKSAVETAKESMDSAKTAWDGLLTEEGADLNG
Meso_11873131	2209111018	Solid Waste From Bioreactor	MSELTLQQEIEARRPATEGTLRQIASVYIDSVAIIASAQAMMESVEQIFADTKIAMSALKSAVETAELAMLSAKVSMDSAKTAFDGIMVDEGVDLNG
Lynggard_10064763	3300000482	Anaerobic Digester	MSEPTLQQEIEARRPATEGTLRQLASVYVDSVAIIASAQAMMGSVEQIFADTGTAMNSLKSAIETAQLAMLSAKESMDSAKTAFDGIMVDEGVGLNG*
Foulum_10220942	3300000510	Anaerobic Digester	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVVQIFADAETAMSALKSAVETAKLAMISAKESMDSAKTAWDGIMVDERVDLNG*
Draft_102796202	3300001975	Biogas Fermenter	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFADTETAMSALKSAVETAKESMDSAKQHGTDYLQRKGLI*
Draft_110926902	3300001975	Biogas Fermenter	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFADTETAMSALKSAVETAKESMDSAKTAWDGLLTEEGADLNG*
Draft_111873131	3300001975	Biogas Fermenter	MSELTLQQEIEARRPATEGTLRQIASVYIDSVAIIASAQAMMESVEQIFADTKIAMSALKSAVETAELAMLSAKVSMDSAKTAFDGIMVDEGVDLNG*
JGI24707J26582_101559861	3300002163	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEEIFADTETAMNSLKSAVETAEVAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24707J26582_101598333	3300002163	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLRQLASVYIDSAAIMASAQAMMESVEHIFADTETAMSALKSAVKTAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24713J26584_100350562	3300002166	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLRQLASVYIDSAAIIASAQAMMESVEQIFADTETAMNNLKSTVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24713J26584_100501392	3300002166	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLRQLASVYIDSAAILASAQAMMESVEQIFADTETAMSALKSAVETAXLAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24713J26584_100854712	3300002166	Biogas Fermentantion	MSELTLQQEIEALRPATEGTLRQLASVYIDSAAIMASAQAMMESVERIFADTETAMNSLKSTVETAELAMLSAKGSMDSAKTAFDGIMVDEGVDLNG*
JGI24713J26584_100944122	3300002166	Biogas Fermentantion	MSELTLQQEIEARRPATEGTLQQIASVYVDSVAILANAQAMMASVEQIFEDTETAMNSLKSAVETAQLAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24714J26587_100343013	3300002167	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24714J26587_100464931	3300002167	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLRQLASVYIDSAAIIASAQAMMESVEQIFADTETAMNNLKSTVETAELAMLSAKESMDSAKTAFDGIMVDEGVD
JGI24714J26587_100539573	3300002167	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLRQLASVYIDSAAILASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24712J26585_100781691	3300002168	Biogas Fermentantion	MSEPTLLQEIEARRPATEGTLQQLASVYVDLVAILASAEAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24712J26585_100910833	3300002168	Biogas Fermentantion	QQEIEARRPATEGTLQQIASVYIDLVAILASAEAMMESVEQIFADTETAMSALKSAVETAKLAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24712J26585_101481152	3300002168	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDLVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24712J26585_101949301	3300002168	Biogas Fermentantion	MSELTLQQEIEALRPATEGTLQQIASVYIDLVAILASAEAMMESVEQIFADTETAMSALKSVVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24711J26586_101789441	3300002170	Biogas Fermentantion	KRFRTFGRFLTTYLWRRGSYWMSEPTLQQEIEARRPATEGTLQQIASVYVDLVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24711J26586_101861782	3300002170	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDLVAILASAEAMMESVEQIFEDTETAMSALKSAVETAELAMLSAKQSMDSAKTAFDGIMVDEGVDLSG*
JGI24709J26583_101167853	3300002173	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLQQIASVYVDSVAIIASAQAMMESVEAMMGSVEVIFADTETVMNSLKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24504J29685_10168321	3300002293	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAEAMMKSVEQIFTNTETAMSALTSAVETAKLAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24504J29685_10168333	3300002293	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAEAMMKSVEQIFTNTETAMSALTSAVETAKLAMLSAKESMDSAKTAWDGLLTEEG
JGI24505J29691_10337463	3300002376	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFEDTETAMSALKSAVETAELAMLSAKESMDSAKTAWDG
JGI24505J29691_10512172	3300002376	Biogas Fermentantion	MSEPTLLQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMASVEQIFADTETAMSALTSAVETAKLAMISAKESMDSAKTAFDGIMVDEGADLNG*
JGI24505J29691_10561242	3300002376	Biogas Fermentantion	MSELTLQQEIEARRPATEGTLQQLASVYVDSAAIMASAQAMMESVEQIFADTETAMSTLKSAVETAELAMISAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24500J29687_100420443	3300002377	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLRQMASVYIDSAAILASAQAMMESVEQIFADTETAMSTLKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24500J29687_100455553	3300002377	Biogas Fermentantion	MSELTLQQEIEARRPATEGTLQQIASVYIDLVAIIASAQAMMESVEQIFEDTETAMSALKSAVETAELAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24500J29687_100559602	3300002377	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLRQMASVYIDSVAILASAEAMMESVEQIFANTETAMNSLKSAVETAQLAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24500J29687_100559611	3300002377	Biogas Fermentantion	EALRPATEGTLRQMASVYIDSVAILASAEAMMESVEQIFANTETAMNSLKSAVETAQLAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24500J29687_100575392	3300002377	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQLASVYVDLVAIIASAQAMMESVEQIFEDTETAMSSLKSAVETAELAMISAKESMDSAKTAWDGLLTEEGVDLNG*
JGI24502J29692_100243783	3300002378	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYIDSVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMISAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24502J29692_100295463	3300002378	Biogas Fermentantion	MSELTLQQEIEALRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTKTAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24502J29692_100341302	3300002378	Biogas Fermentantion	MSELTLQQEIEALRPATEGTLQQIASVYIDSVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLT
JGI24502J29692_100341311	3300002378	Biogas Fermentantion	IKRFRTFGRFLTTYLWRRGSYWMSELTLQQEIEALRPATEGTLQQIASVYIDSVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24502J29692_100387741	3300002378	Biogas Fermentantion	GRFLTTYLWRRGSYWMSEPTLQQEIEARRPATEGTLQQIASVYVDLVAILASAEAMMESVEQIFEDTETAMSALKSAVETAEVAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24502J29692_100391003	3300002378	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAILASAQAMMESVEQIFEDTETAMSALKSAVETAKLAMLSAKESMDSAKTAWDGLLTEEGVDLNG*
JGI24502J29692_100476162	3300002378	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAEAMMESVEQIFADTETAMSALKSAVETAKLAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24502J29692_100884261	3300002378	Biogas Fermentantion	TEGTLQQIASVYIDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24502J29692_101492293	3300002378	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFADTETAMSALKSAVETAELAMISAKESMDSAKTAWDGLLTEEGADL
JGI24501J29690_10209153	3300002391	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDLVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMISAKESMDSAKTAWDGLLTEEG
JGI24501J29690_10362493	3300002391	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDLVAILASAEAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTA
JGI24501J29690_10454281	3300002391	Biogas Fermentantion	PTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFEDTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24501J29690_11035121	3300002391	Biogas Fermentantion	MSERTLLQEIEARRPATEGTLQQIASVYIDLVAILASAEAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24503J29689_100273593	3300002392	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDLVAILASAEAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24503J29689_100481413	3300002392	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILANAEAMMESVEQIFADTETAMSALKSAVETAKLAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24503J29689_100556541	3300002392	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYIDSVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24503J29689_100607712	3300002392	Biogas Fermentantion	MSDSTLQQEIEAQRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFEDTETAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24503J29689_100677791	3300002392	Biogas Fermentantion	GRFLTTYLWRRGSYWMSEPTLQQEIEARRPATEGTLQQIASVYIDSVAILASAEAMMESVEQIFANTETAMNSLKSAVETAQLAMLSAKESMDSAKTAWDGLLTEEGADLNG*
JGI24503J29689_100772771	3300002392	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYXDSVAIIASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24503J29689_101000733	3300002392	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLRQMASIYIDSAAIIASAQEMMESVEQIFTDTETAMSALKSAVETAELAMLSAKVSMDSAKTAWDGIMVDEGV
JGI24503J29689_101886841	3300002392	Biogas Fermentantion	SYWMSEPTLQQEIEARRPATEGTLRQLASVYIDSAAIMASAQTMMESVEQIFADTKTAMNSLKSAVETAELAMLSAKESMDSAKTVWDELLTEEGADLNG*
JGI24499J29688_10092542	3300002406	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAQLAMISAKESMDSAKTAWDGLLTEE
JGI24499J29688_10092553	3300002406	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEEIFADTETAMNSLKSAVETAQLAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24499J29688_10130291	3300002406	Biogas Fermentantion	MSESTLQQEIEARRPATEGTLQQLASVYVDSAAIMASAQAMMESVEQIFADTGTAMSALKSAVETAELAMISAKGSMDSAKTAFDGIMVDEGVDLNG*
JGI24499J29688_10141943	3300002406	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLRQMASIYIDSAAIMASAQAMMESVERIFADTEMAMSALKSTVETAELAMLSAKVSMDSAKTAWDGLLTEEGADLNG*
JGI24499J29688_10143571	3300002406	Biogas Fermentantion	MSELTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFEDTETAMSALKSAVETAKLAMISAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24499J29688_10189512	3300002406	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFANTETAMSALTSAVETAKLAMISAKESMDSAKTAWDGLLTEEGADLNG*
JGI24499J29688_10274922	3300002406	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFTNTETAMSTLKSAVETAKLAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
JGI24499J29688_10392351	3300002406	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLQQLASVYIDSAAIMASAQAMMKSVEIIFADTEASMGDLVTAINAAKVAMESAKTAWDGLLTEEGADLNG*
draft_104602862	3300002898	Biogas Fermenter	MSESTLQQEIEALRPATEGTLRQLASVYIDSAAILASAQAMMESVEEIFADTETAMSALKSAVETAEFAMLSAKESMDSAKTAWDGLLTEEGAALNG*
Ga0004534J46558_10070183	3300003306	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLRQLASVYIDSAAIMASAQAMMESVEHIFADTETAMSALKSAVKTAELAMLSAKESMDSAKTAWDGLLTEE
Ga0004534J46558_10225141	3300003306	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYIDSVAILASAEAMMESVEQIFANTETAMNSLKSAVETAQLAMLSAKESMDSAKTAWDGLLTEEGADLNG*
Ga0078910_1312923	3300005835	Biogas Reactor	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASTQAMMESVEQIFTDTETAMSALKSAVKTAELAMLSAKESMDSAKTAWDGLLTEEGVDLNG*
Ga0079224_1030453232	3300009095	Agricultural Soil	MNEPTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
Ga0116169_11057772	3300009653	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLRQLASVYIDSAAIMASAQAMMESVELAMLSVKESMDSAKTAWDGLLTEEGADLNG*
Ga0116188_10293973	3300009658	Anaerobic Digestor Sludge	MSEPTLQQEIEALRPATEGTLRQLASVYIDSVAIIASAQAMMESVELAMISAKESMDSLKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
Ga0116181_12554511	3300009663	Anaerobic Digestor Sludge	MSERTLQQEIEARRPATEGTLRQIASVYIDSVAIIASAQAMMESVEQIFANTETVMNSLKSAVETAELAMISAKESMDSAKTAWDGLLTEEGAD
Ga0116147_13531121	3300009667	Anaerobic Digestor Sludge	MSEPTLQQEIEALRPATEGTLRQLASVYIDSVAIIASAQAMMESAELAMISAKESMDSAKTAFDGIMVDEGVDLNG*
Ga0116180_10399342	3300009668	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLRQIASVYIDSVAIIASAQAMMESVEQIFANTETAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
Ga0116180_13017252	3300009668	Anaerobic Digestor Sludge	MNEPTLQQEIEARRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFANTETAMNSLKSAVETAELAMLSAKASMDSAKTAFDGIMVDEGVDLNG*
Ga0116165_12857322	3300009712	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQLASVYVDSVAILASAQAMMESVEQIFADTETAMSALKSAVGTAELAMISAKESMESAKTAWDGLLTEEGADLNG*
Ga0116168_11405101	3300009761	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLRQLASVYIDSAAIMASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG*
Ga0116245_100332353	3300010338	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKASMDSAKTAFDGIMVDEGVDLNG*
Ga0116250_101188033	3300010340	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAILASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
Ga0116250_101238172	3300010340	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAIIASAQAMMESVEQIFANTETAMNSLKSAVETAGLAMISAKESMDSAKTAWDGLLTEEGADLNG*
Ga0116250_102984122	3300010340	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLRQIASVYIDSVAIIASAQAMMESVEQIFANTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG*
Ga0116238_104381393	3300010347	Anaerobic Digestor Sludge	MSEPTLQQEIEALRPATEGTLRQLASVYIDSVAIIASAQAMMESVELAMISAKESMDSAKTAFDGIMVDEGVDLNG*
Ga0172377_114714632	3300014206	Landfill Leachate	MSEPTLQQEIEALRPATEGTLQQLASVYIDSAAIIASAQAMMESVEQLFADTETAMSALKSAVETAELAMISAKESMDSAKTAFDGIMVDEGVDLNG*
Ga0172382_109024782	3300015214	Landfill Leachate	MTEPRTLVEEIERAYPATEGTLKDLASVYVNSQAIMASAQAMMESVEQIFADTETAMGTLKSAVETAELAMISAKESMDSAKTAWDGLLTEEGADLNG*
Ga0179955_11940141	3300019203	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYIDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAWDGLLQRRGLI
Ga0179954_10544142	3300019218	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMESAKTAWDGLLTEEGADLNG
Ga0179956_11384111	3300019227	Anaerobic Digestor Sludge	EPTLQQEIEALRPATEGTLRQLASVYIDSAAIMVSAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAWDGIMVDEGVDLNG
Ga0179956_12564033	3300019227	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYIDSVAIIASAQAMMESVELAMISAKESMDSAKTAWDGLLTEEGADLNG
Ga0179952_10829373	3300019235	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKASMDSAKTAFDGIMVDEGVDLNG
Ga0179953_11353073	3300019243	Anaerobic Digestor Sludge	SERTLQQEIEARRPATEGTLQQLTSVYIDSAAIMASAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAFDGIMVDEGVDLNG
Ga0179953_13011003	3300019243	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTETAMNSLKLAVETAELAMISAKESMDSAKTAWDGIMVDEGVDLNG
Ga0209409_10884422	3300025589	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFGDTETAMNSLKSAVETAELAMISAKESMDSAKTAFDGIMVDEGVDLNG
Ga0209608_11342421	3300025609	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLRQLVSVYIDSAAIIASAQAMMESVEQIFADTETAMSALKSAVETAGLAMLSAKESMDSAKTAFDGIMVDEGVDLNG
Ga0209608_11387052	3300025609	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLRQLASVYIDSAAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG
Ga0208461_10184683	3300025613	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAFDGIMVDEGVDLNG
Ga0208693_11422782	3300025618	Anaerobic Digestor Sludge	MSWSTLQQEIEARRPATEGTLRQMASVYIDSAAIMASTQAMMESVEQIFANTETAMNSLKSAVETAELAMLSAKESMDSATTAWDGLLTEEGADLNG
Ga0208824_10345252	3300025629	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAWDGLLTEEGADLNG
Ga0208198_10442604	3300025638	Anaerobic Digestor Sludge	TEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAWDGLLTEEGADLNG
Ga0208198_11190801	3300025638	Anaerobic Digestor Sludge	TEGTLQQIASVYVDSVAIIASAQAMMESVEQIFADTETAMNSLKSAVETAELAMISAKESMDSAKTAFDGIMVDEGVDLNG
Ga0208823_11861502	3300025657	Anaerobic Digestor Sludge	TEGTLQQLASVYIDSAAIIASAQAMMESVEQIFTDTETAMNSLKSAVETAKLAMLSAKESMDSAKTAFDGIMVDEGVDLNG
Ga0208564_10706522	3300025683	Anaerobic Digestor Sludge	MSEPTLQQEIEARRPATEGTLQQLASVYIDSAAILASAQAMMESVEQIFADTETAMNSLKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG
Ga0209537_10177817	3300027510	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLRQLASVYIDSAAIIASAQAMMESVEQIFADTETAMNNLKSTVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG
Ga0209537_10356712	3300027510	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLQQLASVYIDSAAIMASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG
Ga0209537_10357123	3300027510	Biogas Fermentantion	MSELTLQQEIEARRPATEGTLRQLASVYIDSAAIIASAQAMMESVERIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG
Ga0209537_10504692	3300027510	Biogas Fermentantion	MSEPTLQQEIEARRPATEGTLQQIASVYVDSVAILASAEAMMKSVEQIFTNTETAMSALTSAVETAKLAMLSAKESMDSAKTAWDGLLTEEGADLNG
Ga0209537_10540832	3300027510	Biogas Fermentantion	MSEPTLQQEIEALRPATEGTLRQLASVYIDSAAILASAQAMMESVEQIFADTETAMSALKSAVETAELAMLSAKESMDSAKTAFDGIMVDEGVDLNG
Ga0209537_10927112	3300027510	Biogas Fermentantion	MSELTLQQEIEARRPATEGTLQQIASVYVDSVAILANAQAMMASVEQIFEDTETAMNSLKSAVETAQLAMISAKESMDSAKTAWDGLLTEEGADLNG
Ga0209537_11002752	3300027510	Biogas Fermentantion	MSELTLQQEIEALRPATEGTLRQLASVYIDSAAIMASAQAMMESVERIFADTETAMNSLKSTVETAELAMLSAKGSMDSAKTAFDGIMVDEGVDLNG
Ga0134854_10081836	3300029822	Fermentation Pit Mud	MTEPRTLVEEIERAYPATEGTLKDLASVYVNSQAIMESAQAMMGSVEAMMGSVEVIFADTETAMSTLKSAVETAELAMLSAKESMDSAKTAWDGLLTEEGADLNG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085052

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences