Metagenome / Metatranscriptome Family F084257

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084257
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	76 residues
Representative Sequence	MLNLKKPMKQYYSESEAAHTLCISLEALHEILDKHVFNLEHSRPAVLEFTHAELLLLSVWAEPERGRNVVAMPCRN
Number of Associated Samples	72
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.93 %
% of genes near scaffold ends (potentially truncated)	25.89 %
% of genes from short scaffolds (< 2000 bps)	65.18 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.536 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (20.536 % of family members)
Environment Ontology (ENVO)	Unclassified (58.036 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (35.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 3.85% Coil/Unstructured: 71.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13419	HAD_2	13.39
PF13738	Pyr_redox_3	8.04
PF01491	Frataxin_Cyay	4.46
PF00589	Phage_integrase	4.46
PF13242	Hydrolase_like	2.68
PF00989	PAS	1.79
PF13328	HD_4	0.89
PF04545	Sigma70_r4	0.89
PF07690	MFS_1	0.89
PF13480	Acetyltransf_6	0.89
PF00881	Nitroreductase	0.89
PF08241	Methyltransf_11	0.89
PF13380	CoA_binding_2	0.89
PF09286	Pro-kuma_activ	0.89
PF14720	NiFe_hyd_SSU_C	0.89
PF13692	Glyco_trans_1_4	0.89
PF12679	ABC2_membrane_2	0.89
PF00890	FAD_binding_2	0.89
PF00392	GntR	0.89
PF02880	PGM_PMM_III	0.89
PF03659	Glyco_hydro_71	0.89
PF00027	cNMP_binding	0.89
PF00293	NUDIX	0.89
PF00149	Metallophos	0.89
PF00188	CAP	0.89
PF00072	Response_reg	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1965	Fe-S cluster assembly protein CyaY, frataxin homolog	Inorganic ion transport and metabolism [P]	4.46
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.89
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.89
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.89
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.07 %
Unclassified	root	N/A	4.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.71 %
Unclassified	root	N/A	4.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.71 %
Unclassified	root	N/A	4.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.46 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.71 %
Unclassified	root	N/A	4.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.46 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.46 %
Unclassified	root	N/A	4.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.46 %
Unclassified	root	N/A	4.46 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004628\|Ga0070399_1004952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	10659	Open in IMG/M
3300006423\|Ga0075039_1225897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300009644\|Ga0116121_1266475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300009649\|Ga0105855_1046047	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300009665\|Ga0116135_1075686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300009665\|Ga0116135_1368043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300009665\|Ga0116135_1498701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300010339\|Ga0074046_10568362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300010343\|Ga0074044_10305653	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300012206\|Ga0137380_10075442	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300012209\|Ga0137379_10257633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1656	Open in IMG/M
3300014160\|Ga0181517_10113107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300014160\|Ga0181517_10436400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300014161\|Ga0181529_10011935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7954	Open in IMG/M
3300014161\|Ga0181529_10028766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4329	Open in IMG/M
3300014167\|Ga0181528_10000245	All Organisms → cellular organisms → Bacteria → Acidobacteria	46762	Open in IMG/M
3300014167\|Ga0181528_10000787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	20972	Open in IMG/M
3300014167\|Ga0181528_10001143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16719	Open in IMG/M
3300014167\|Ga0181528_10001156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16643	Open in IMG/M
3300014167\|Ga0181528_10645659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300014167\|Ga0181528_10846278	Not Available	516	Open in IMG/M
3300014169\|Ga0181531_10002099	All Organisms → cellular organisms → Bacteria	12478	Open in IMG/M
3300014199\|Ga0181535_10334389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300014199\|Ga0181535_10526203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300014491\|Ga0182014_10034776	All Organisms → cellular organisms → Bacteria	3780	Open in IMG/M
3300014493\|Ga0182016_10021396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5756	Open in IMG/M
3300014493\|Ga0182016_10055053	All Organisms → cellular organisms → Bacteria	3063	Open in IMG/M
3300014493\|Ga0182016_10374543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300014655\|Ga0181516_10148558	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300014655\|Ga0181516_10182396	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300014655\|Ga0181516_10675582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300014658\|Ga0181519_10791795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300014838\|Ga0182030_10001739	All Organisms → cellular organisms → Bacteria	45381	Open in IMG/M
3300014838\|Ga0182030_10001843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	44385	Open in IMG/M
3300014838\|Ga0182030_10042039	All Organisms → cellular organisms → Bacteria	7577	Open in IMG/M
3300014839\|Ga0182027_11128084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300016728\|Ga0181500_1297144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300016728\|Ga0181500_1398628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2548	Open in IMG/M
3300017948\|Ga0187847_10214419	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300017988\|Ga0181520_10000486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	87720	Open in IMG/M
3300017988\|Ga0181520_10002203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	36957	Open in IMG/M
3300017988\|Ga0181520_10076326	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300017988\|Ga0181520_10602142	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300017988\|Ga0181520_10875076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300017988\|Ga0181520_11019277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300018037\|Ga0187883_10729544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300018042\|Ga0187871_10153861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300018042\|Ga0187871_10534575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300018043\|Ga0187887_10102428	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300018043\|Ga0187887_10257778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300019256\|Ga0181508_1557089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300019270\|Ga0181512_1141288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300022861\|Ga0224528_1000988	All Organisms → cellular organisms → Bacteria	20237	Open in IMG/M
3300022863\|Ga0224532_1042329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300022863\|Ga0224532_1056083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300022872\|Ga0224526_1097497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300023091\|Ga0224559_1040096	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300023091\|Ga0224559_1248386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300023247\|Ga0224529_1022261	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300023247\|Ga0224529_1064757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300025612\|Ga0208691_1048300	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300026502\|Ga0255350_1043606	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
(restricted) 3300028024\|Ga0255336_100110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	191478	Open in IMG/M
3300028084\|Ga0255356_1034534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300028560\|Ga0302144_10198317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300028762\|Ga0302202_10156421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300028766\|Ga0302269_1203299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300028783\|Ga0302279_10315093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300028785\|Ga0302201_10420519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300028860\|Ga0302199_1203862	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300028873\|Ga0302197_10244374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300028909\|Ga0302200_10237726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300029908\|Ga0311341_10439249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300029908\|Ga0311341_10444339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300029922\|Ga0311363_10839410	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300029939\|Ga0311328_10094299	All Organisms → cellular organisms → Bacteria	2514	Open in IMG/M
3300029945\|Ga0311330_11195697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300029952\|Ga0311346_10811287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300029953\|Ga0311343_10536869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300030041\|Ga0302274_10083416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300031258\|Ga0302318_10336157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300031524\|Ga0302320_10125876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3981	Open in IMG/M
3300031524\|Ga0302320_11738193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031788\|Ga0302319_11406331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031813\|Ga0316217_10044216	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300031813\|Ga0316217_10208593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300031813\|Ga0316217_10372598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031884\|Ga0316220_1040483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1987	Open in IMG/M
3300032117\|Ga0316218_1041509	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300032560\|Ga0316223_1169379	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300032675\|Ga0316225_1007948	All Organisms → cellular organisms → Bacteria → Proteobacteria	6376	Open in IMG/M
3300032676\|Ga0316229_1270445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300032722\|Ga0316231_1117629	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300033402\|Ga0326728_10088101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3888	Open in IMG/M
3300033402\|Ga0326728_10174151	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300033402\|Ga0326728_10634068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300033755\|Ga0371489_0001999	All Organisms → cellular organisms → Bacteria	28394	Open in IMG/M
3300033887\|Ga0334790_110931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300033888\|Ga0334792_012153	All Organisms → cellular organisms → Bacteria	3341	Open in IMG/M
3300034124\|Ga0370483_0000063	All Organisms → cellular organisms → Bacteria	36158	Open in IMG/M
3300034163\|Ga0370515_0016523	All Organisms → cellular organisms → Bacteria	3428	Open in IMG/M
3300034199\|Ga0370514_002714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3905	Open in IMG/M
3300034199\|Ga0370514_016663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1760	Open in IMG/M
3300034199\|Ga0370514_049293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300034199\|Ga0370514_180286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300034282\|Ga0370492_0007279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4480	Open in IMG/M
3300034282\|Ga0370492_0011372	All Organisms → cellular organisms → Bacteria	3635	Open in IMG/M
3300034282\|Ga0370492_0312902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Aquatic	Environmental → Aquatic	41.96%
Bioreactor	Engineered → Bioreactor	0.89%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	41.96%
Peat	Environmental → Terrestrial → Peat	35.71%
Soil	Environmental → Terrestrial → Soil	21.43%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	35.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.75%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	35.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	29.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.93%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	8.04%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	20.54%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	18.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	12.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	8.04%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	8.04%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.46%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.79%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Bioreactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Bioreactor	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004628	Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 4 (version 1)	Engineered	Open in IMG/M
3300006423	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_056 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300028024 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T3_179	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070399_100495210	3300004628	Bioreactor	MNARKTMKQFYTETEVAHALCISLEALHELLDKHVFDLDNPRPDVLEFTHAELLLLSVWAEPERACNVITMPGKDQIFI*
Ga0075039_12258971	3300006423	Permafrost Soil	LMLNLKKPMKQYYSESEAAHTLCISLEALHEILDKHVFNLEHSRPAVLEFTHAELLLLSVWAEPERGRNVVAMPCRN*
Ga0116121_12664751	3300009644	Peatland	MLTLRKPMKPYYSETEAAHSLCISLEALHTILDEHVFTAEHPRPATLDFTHAELLLLSVWAVPEHCDNLLAMPCRS*
Ga0105855_10460472	3300009649	Permafrost Soil	MLNLKKPMKQYYSESEAAHTLCISLEALHEILDKHVFNLEHSRPAVLEFTHAELLLLSVWAEPERGRNVVAMPCRN*
Ga0116135_10756862	3300009665	Peatland	MLTLKKPMKPYYTETEAAHSLCISLEALHEILDKHVFTREYPRPAVLEFTHAELLLLSVWAKPERGRNVLAMPSRN*
Ga0116135_13680432	3300009665	Peatland	MDFVNHVSPKQKDAAHMLNLKKPTKQYYNEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD*
Ga0116135_14987012	3300009665	Peatland	MYNSNVPPESKDTTVMLSLKKPVKQHYSEPEAAQTLCISLEALYELLDKHLFTPENPRPGPGELEFTHADLLLLSVWAKPVRGHNVVAMPHRH*
Ga0074046_105683622	3300010339	Bog Forest Soil	MLNLKKPINQYYSESEAAQTLCISLEALHAILDAHVFTADNPRPVVLEFSHAELLLLSVWAEPERGLNVVAMPRRD*
Ga0074044_103056533	3300010343	Bog Forest Soil	VKQYYSEQEAAHTLCITLEALHGILDQHLFTPEHPRPAELEFTHAELLLLSVWAKPERGHNVVAMLRRD*
Ga0137380_100754422	3300012206	Vadose Zone Soil	MLTLKKPIKQYYSEAEAAHTLCISPEALHEILDKHVFNHEHPRPDVLEFTHAELLLISVWAEPVRGANVVAMPARN*
Ga0137379_102576331	3300012209	Vadose Zone Soil	MLTLKKPIKQYYSESEAAHTLCISVEAIHEVLDKHVFNHEHPRPEVLEFTHAELLLISVWAEPVRGANVVAMPSRN*
Ga0181517_101131072	3300014160	Bog	MLNLKKPIKQYYSESEAAHNLCISLEALHEILDTHVFTAEHPRPAVLEFSHAELLLLSVWAQPERGRNVVAMPRRD*
Ga0181517_104364001	3300014160	Bog	MLNLKKPMKQYYSEVEAAHALCISLEALHEILDQHVFSAEHPRPAVLEITHAELLLLSVWGEPERGANVVTMQLRS*
Ga0181529_100119353	3300014161	Bog	MNQYYSEAEAARTLCITIDALRNILDKHIFNEAHPRPAVLEFTHAELLLLSVWAEPERGGNVVAMPSKT*
Ga0181529_100287662	3300014161	Bog	MLNLKKPIKQYYTETEAAHALCISLGALHEILDKHVFSPDHARPAVLEITHAELLLLSVWAEPEIGRSNNNSNVVAMPVRD*
Ga0181528_100002457	3300014167	Bog	MLTLKKPNKQYYSEAEAARALCISMEALHDLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGRNVLAMPSRS*
Ga0181528_1000078722	3300014167	Bog	MLTLRKSMNQYYSEAEAARTLCITIDALRNILDKHIFNEAHPRPAVLEFTHAELLLLSVWAEPERGGNVVAMPSKT*
Ga0181528_100011433	3300014167	Bog	MLNLRKPTKQYYSETEAAHALCISLESLRETLDAHIFDREHPRPEVLEFTHAELLLISVWAEPERGRNVLAMPARG*
Ga0181528_100011564	3300014167	Bog	MLNLKKPTKQYYTETEAAHSLRISLESLHEILDQHVFNQGLPRPAVLEFTHSELLLLSVWAEPERGRNVVAMPSRN*
Ga0181528_106456592	3300014167	Bog	MLTLRKSMNQYYNEAEAARTLCITVDALRNILDEHIFDVAHPRPPVLEFTYAELLLLSVWAEPERGGNVVAMPSKP*
Ga0181528_108462781	3300014167	Bog	MLTLKKPVKQYYSDVEAAHALSISIESLYQLLDEHVFNAGHPRPPVVEFTHADLLLLTVWAEAPRGHNVVAMPNRG*
Ga0181531_1000209913	3300014169	Bog	MLNLKKPTKQYYNENEAAHALCISVEALYDVLDKHIFNREHPRPEILEFTHAELLLISVWAEPERGRNVLAMPARAMEQRG*
Ga0181535_103343891	3300014199	Bog	MLNLKKPIKQYYTETEAAHALCISLGALHEILDKHVFSTDHARPAVLEITHAELLLLSVWAEPEIGRSNNNSNVVAMPVRD*
Ga0181535_105262031	3300014199	Bog	ESEAAHNLCISLEALHEILDTHVFTAEHPRPAVLEFSHAELLLLSVWAQPERGRNVVAMPRRD*
Ga0182014_100347766	3300014491	Bog	MLTLKKPNKQYYSEAEAAHSLCISIEALHNLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGCNVLAMPSRS*
Ga0182016_100213967	3300014493	Bog	MLNLKKPTKQYYSEAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK*
Ga0182016_100550533	3300014493	Bog	MLNLKKPIKQYYSETEAARTLCISLESLHEILDTHVFTADHPRPAILEFSHAELLLLSVWAEPERGRNVVAMPRRD*
Ga0182016_103745432	3300014493	Bog	MLSLKKPVKQYYSELEAAHTLCISLEALHEILDEHLFTPEHPRPVDLEFTHAELLLLSVWAKPERGHNVVSMQRRD*
Ga0181516_101485582	3300014655	Bog	MLNLKKPTKQYYSETEAAHTLCISLEALHKILDKHVFNDEHTRPAVLEFTHAELLLMSVWAEPERGRNVVAMPSRN*
Ga0181516_101823962	3300014655	Bog	MLNLKKPTKQYYNEIEAAHTLCISLEALHDILDKHVFNNEHPKPAVLEFTHAELLLLSVWAEPERGHNVLAMPSRDERSHEQCK*
Ga0181516_106755821	3300014655	Bog	MLNLKKPTKQYYNEIEAAHALCISLEALYGLLDKHVFNVEHPRPHVLEFTHADLLLMSVWAEPERGCNVLAMPARE*
Ga0181519_107917951	3300014658	Bog	TIMLTLKKPNKQYYSEAEAARALCISMEALHDLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGRNVLAMPSRS*
Ga0182030_1000173936	3300014838	Bog	MLNLKKPTKQYYSETEAAHSLCISVEALHEILDQRIFNQEHPRPAVLEFTHAELLLLSVWAEPERGRNVVAMPSRN*
Ga0182030_1000184342	3300014838	Bog	MLTLKKPMKPYYSEAEAAHTLCITLDALYEILDTHVFTAEHPRPVHLEFTHAELLLLSVWAKPVRGSNVVAMPSRN*
Ga0182030_100420397	3300014838	Bog	MLTLRKPMKPYYSETEAAHSLCISLRTLHTILDKHVFTAQHPRPATLEFTHTELLLLSVWAVPEHSDNLLAMPCRN*
Ga0182027_111280843	3300014839	Fen	MLTLRKPMKPYYSETEAAHSLCISLRTLHTILDKHVFTAQHPRPATLEFTHTELLLLSVWAVPEHSVNLLAMPCRN*
Ga0181500_12971441	3300016728	Peatland	MLNLKKPTKQYYNENEAAHALCISVEALYDVLDKHIFNREHPRPEILEFTHAELLLISVWAEPERGRNVLAMPARAMEQRG
Ga0181500_13986282	3300016728	Peatland	MQWGASGVQRLSPTECASPEDVSQKRRTPTSMLNLRKPTKQYYSETEAAHALCISLESLRETLDAHIFDREHPRPEVLEFTHAELLLISVWAEPERGRNVLAMPARG
Ga0187847_102144191	3300017948	Peatland	MLTLKKPTKPYYSEAEAAHTLCISLEALHEILDKHVFTAEHPRPVNLEFTHAELLLLSVWAKPVRGSNVVAMPSRN
Ga0181520_100004864	3300017988	Bog	MLNLKKPIKQYYSESEAAHNLCISLEALHEILDTHVFTAEHPRPAVLEFSHAELLLLSVWAQPERGRNVVAMPRRD
Ga0181520_100022033	3300017988	Bog	MLTLRKSMNQYYSEAEAARTLCITIDALRNILDKHIFNEAHPRPAVLEFTHAELLLLSVWAEPERGGNVVAMPSKT
Ga0181520_100763262	3300017988	Bog	MLTLKKPTKQYYNESEAAHTLCISLEALYAILDEHVFNLEHPRPTVLEFTHAELLLLSVWAEPVRGSNVVAMPNRD
Ga0181520_106021421	3300017988	Bog	MLNLKKPTKQYYNENEAAHALCISLEALYDVLDKHIFNREHPRPEILEFTHAELLLISVWAEPERGRN
Ga0181520_108750762	3300017988	Bog	MLNLKKPIKQYYTETEAAHAVCISLGALHEILDKHVVSPDHARPAVLQTTRAELLLLSVWAEPEIGRSNNNSNVVAMPVRD
Ga0181520_110192772	3300017988	Bog	MLTLKKPMKQYYTEAEAAHSLCISLEALHEILDKHVFNEEPRRPEVLEFTHAELLLISVWAEPVRGCNV
Ga0187883_107295441	3300018037	Peatland	MLTLKKPMKPYYSEAEAAHSLCISLDALHEILDKHVFTREYPRPAVLEFTHAELLLLSVWAKPERGRNVLVMPSRN
Ga0187871_101538612	3300018042	Peatland	MLSAMKTMKQFYSETEAAESLCISLEALYEILDSHVFTPESPRPDELELTYPDLLLLSVWAQPQRGYNVVEMPHRL
Ga0187871_105345752	3300018042	Peatland	MLTLKKPMKSYYSEAEAAHCLCISLDALHDILDSQVFTEDHPRPVNLEFTHAELLLLSVWAKPVRGSNVVAMPCRD
Ga0187887_101024282	3300018043	Peatland	MLNLKKPIKQYYSETEAARTLCISPESLHEILDTHVFTADHPRPAILEFSHAELLLLSVWAEPERGRNVVSMPRRD
Ga0187887_102577783	3300018043	Peatland	MLTLRKPMKPYYSETEAAHSLCISLEALHTILDEHVFTAEHPRPATLDFTHAELLLLSVWAVPEHCDNLLAMPCRS
Ga0181508_15570891	3300019256	Peatland	TPTSMLNLRKPTKQYYSETEAAHALCISLESLRETLDAHIFDREHPRPEVLEFTHAELLLISVWAEPERGRNVLAMPARG
Ga0181512_11412881	3300019270	Peatland	MLNLKKPTKQYYTETEAAHSLRISLESLHEILDQHVFNQGLPRPAVLEFTHSELLLLSVWAEPERGRNVVAMPSRN
Ga0224528_10009887	3300022861	Soil	MLNLKKPMKQYYSEADAAHTLCISIEALHEILDQHVFNPEHPRPAVLEFTHAELLLLSVWAKPERGRNVVSMPDRS
Ga0224532_10423292	3300022863	Soil	YSEAEAAHSLCISIEALHNLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGCNVLAMPSRS
Ga0224532_10560831	3300022863	Soil	MLNLKKPTKQYYTETEAAHALRISLESLHEILDQHVFNEGLPRPAVLEFTHSELLLLSVWAEPERGRNVVAMPSRN
Ga0224526_10974972	3300022872	Soil	MLNLKKPTKQYYTEAEAAHALCISSESLRTILDKHIFNSEHPRPAVLEFTHAELLLISVWAEPERGRNILAMPARV
Ga0224526_11016531	3300022872	Soil	MLTLRKPMKPYYSETEAAHSLCISLRTLHTILDKHVFTAQHPRPATLEFTHTELL
Ga0224559_10400962	3300023091	Soil	MLTLRKPMKLYYSETEAARSLCISLDALHAILDEHVFTAEHPRPATLDFTHTELLLLSVWAVPEHSDNLLAMPCRN
Ga0224559_12483861	3300023091	Soil	MSTRIARTAFMLTLRKPTNQYYSEAEAAHSLCITLEALHKILDTHIFNHEHPRPAVLEFTHAELLLLSVWAEPERGSNVVSMPSNS
Ga0224529_10222611	3300023247	Soil	MDFVNHVSPKQKDAAHMLNLKKPTKQYYNEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD
Ga0224529_10647571	3300023247	Soil	MLTLKKPIKQYYNEAEAAQALCVSIESLHAIMDQYLFNAEHPRPAVLELTHADLLLISVWAEPDRGANVVTMPVRD
Ga0208691_10483002	3300025612	Peatland	MLTLKKPMKPYYTETEAAHSLCISLEALHEILDKHVFTREYPRPAVLEFTHAELLLLSVWAKPERGRNVLAMPSRN
Ga0255351_10667652	3300026456	Soil	MLTLKKPNKQYYSEAEAAHSLCISIEALHNLLDEHIFNAEHPRPAVLEFTHAELLLLTI
Ga0255350_10436062	3300026502	Soil	MLTLRKPMKPYYSETEAAHSLCISLRTLHTILDKHVFTAQHPRPATLEFTHTELLLLSVWAVPEHSDNLLAMPCRN
(restricted) Ga0255336_10011049	3300028024	Sandy Soil	MLTLKKPIKQYYSEAEAAHTLCISTEALHEILDKHVFNHEHPRPEVLEFTHAELLLISVWAEPARGANVVAMPARN
Ga0255356_10345341	3300028084	Soil	GMDFVNHVSPKQKDAAHMLNLKKPTKQYYNEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD
Ga0302144_101983172	3300028560	Bog	MLNLKKPTKQYYSEAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK
Ga0302202_101564213	3300028762	Bog	MLNLKKPTKQYYSETEAAHSLCISVEALHEILDQRIFNQEHPRPAVLEFTHAELLLLSVWAEPERGRNVVAMPSRN
Ga0302269_12032992	3300028766	Bog	EAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK
Ga0302279_103150931	3300028783	Bog	KAPTLMLNLKKPTKQYYSETEAAHSLCISVEALHEILDQRIFNQEHPRPAVLEFTHAELLLLSVWAEPERGRNVVAMPSRN
Ga0302201_104205192	3300028785	Bog	GVQRISPPGMDFVNHVSPKQKDAAHMLNLKKPTKQYYNEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD
Ga0302199_12038622	3300028860	Bog	MLNLKKPTKQYYSEAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPE
Ga0302197_102443741	3300028873	Bog	PPEYKRTPTPMLNLKKPTKQYYSEAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK
Ga0302200_102377261	3300028909	Bog	SEAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK
Ga0311341_104392491	3300029908	Bog	LKKPTKQYYSEAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK
Ga0311341_104443392	3300029908	Bog	PICTGGWAGYKGMSPGNLKAPTLMLNLKKPTKQYYSETEAAHSLCISVEALHEILDQRIFNQEHPRPAVLEFTHAELLLLSVWAEPERGRNVVAMPSRN
Ga0311363_108394101	3300029922	Fen	MLNLKKPTKQYYNEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD
Ga0311328_100942994	3300029939	Bog	MLNLKKPTKQYYSEAEAAHTLCISLESLHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK
Ga0311330_111956972	3300029945	Bog	NEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD
Ga0311346_108112873	3300029952	Bog	YYSEAEAAHSLCISIEALHNLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGCNVLAMPSRS
Ga0311343_105368691	3300029953	Bog	HMLNLKKPTKQYYNEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD
Ga0311331_1002456412	3300029954	Bog	MLNLKKPTKQYYSETEAAHSLCISVEALHEILDQRIFNQEHPRPAVLEFTHAELL
Ga0311331_116340862	3300029954	Bog	MLTLRKPMKPYYSETEAAHSLCISLRTLHTILDKHVFTAQHPRPATLEFTHTELLLLS
Ga0302274_100834164	3300030041	Bog	KGMSPGNLKAPTLMLNLKKPTKQYYSETEAAHSLCISVEALHEILDQRIFNQEHPRPAVLEFTHAELLLLSVWAEPERGRNVVAMPSRN
Ga0302318_103361572	3300031258	Bog	YSEAEAAHTLCISLEALHKIIEKHIFNEEPSRPEVLEFTHAELLLLSVWAEPERGRNVLAMPARK
Ga0302320_101258761	3300031524	Bog	MLNLKKPMKQYYTEAEAAHTLCISVEALHAILDQHVFTPEHPRPAVLELTHAEMLLLSVWAEPERGRNVVAMPSRS
Ga0302320_117381932	3300031524	Bog	MLTLRKPMKTYYSETEAAHSLCISLEALHTILDEHVFTAEHPRPATLDFTHAELLLLSVWAVPEHSDNLLAMPCRN
Ga0302319_114063312	3300031788	Bog	LGSSPHGQCPLEGVQRISPPGMDFVNHVSPKQKDAAHMLNLKKPTKQYYNEIEAAHALCISQEALHEVLDKHIFNREHPRPGVLEFTHAELLLISVWAEPERGRNVLAMPARD
Ga0316217_100442164	3300031813	Freshwater	MLTLKKPLKPYYTEVEAAHFLCISLDALHKILDEHVFTLEHPRPAALELTHPELLLLSVWAVPDHSYNLLAMPSRR
Ga0316217_102085931	3300031813	Freshwater	MLTLRKPSKQYYSEAEAARALCISIGALHNLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGRNVLAMPSRS
Ga0316217_103725981	3300031813	Freshwater	LKKPTKQYYSEAEAARSLCISLEALHEILDTQIFNAEHPRPAVLELTHAELLLLTIWAVPERGHNVLAMPSRN
Ga0316220_10404831	3300031884	Freshwater	KPTKQYYSESEAAHSLCISLEALHSLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGGNVLSMPSRN
Ga0316218_10415094	3300032117	Freshwater	MLTLKKPTKQYYSESEAAHSLCISLEALHSLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGGNVLSMPSRN
Ga0316223_11693791	3300032560	Freshwater	MLTLKKPTKQYYSESEAAHSLCISLEALHSLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEP
Ga0316225_10079489	3300032675	Freshwater	GQRTIMLTLKKPTKQYYSESEAAHSLCISLEALHSLLDEHIFNAEHPRPAVLEFTHAELLLLTIWAEPERGGNVLSMPSRN
Ga0316229_12704451	3300032676	Freshwater	MLTLKKPLKPYYSEVEAAHYLCISLEALHEILDEHVFNSEHPRPAALELTHPELLLLSVWAVPDHSNNLLAMPSRR
Ga0316231_11176292	3300032722	Freshwater	MERRTLQPMLTLKKPLKPYYSEVEAAHYLCISLEALHEILDEHVFNSEHPRPAALELTHPELLLLSVWAVPDHSNNLLAMPSRR
Ga0326728_100881015	3300033402	Peat Soil	MLTLKKSMNQYYSEAEAARALCITVDALHSILDEHIFDDAHPRPAVLEFTHAELLLLSVWAEPERARNVVAMPSKT
Ga0326728_101741512	3300033402	Peat Soil	MLNLKKPTKQYYNEIEAAHALCISLEALYGLLDKHVFNVEHPRPHVLEFTHADLLLMSVWAEPERGCNVLAMPARE
Ga0326728_106340681	3300033402	Peat Soil	MLTLKKSIKQYYDEVEAARALGISLEYLREILDRHIFTTEHPRPDVVEFTHADLLLISVWIEPGVPNNVLAMPPRGN
Ga0371489_0001999_16767_17012	3300033755	Peat Soil	MLNLKKPIKQYYTETEAAHALCISLGALHEILDQHVFSPDHARPAVLEITHAELLLLSVWAEPEIGRSNNNSNVVAMPVRD
Ga0334790_110931_2_211	3300033887	Soil	MKPYYSEAEAAHTLCITLEALHEILDNHVFTSDHPRPVHLEFTHAELLLLSVWAKPVRGANVLSMPSRN
Ga0334792_012153_3063_3293	3300033888	Soil	MLSLKKPVKQYYSEPEAAHTLCITLEALHEILDTHVFTPEHPRPGELEFTHAEMVLLSVWAQPERGHNVVTMPHRD
Ga0370483_0000063_19599_19829	3300034124	Untreated Peat Soil	MLTLKKPMKQYYTETEAAHSLCISLEALHEILDKHVFNDEHPRPVVLEFTHAELLLLSVWAEPVRGCNVVSMPSRN
Ga0370515_0016523_487_717	3300034163	Untreated Peat Soil	MLSLKKPVKQYYSESEAAHTLCISLEALHELLDKHLFSLENPRPDQLEFTHAELLLLSVWAKPERGHNVVEMNHRY
Ga0370514_002714_21_251	3300034199	Untreated Peat Soil	MLSLKKPVKQYYSELEAAHTLCITLEALHEILDNHLFTPDHPRPVELEFTHAELLLLSVWAKPERGHNVVAMLRRD
Ga0370514_016663_103_333	3300034199	Untreated Peat Soil	MLTLKKPLKPYYSVAEAAHTLCITLDALYEILDDNVFTADHPRPAHLEFTHAELLLLSVWAKPIPGSNVLAMPSRN
Ga0370514_049293_354_599	3300034199	Untreated Peat Soil	MLNLKKPTKQYYNENEAAYALCISVEALYDVLDKHIFNREHPRPEILEFTHAELLLISVWAEPERGRNILAMPARVQEQRG
Ga0370514_180286_1_270	3300034199	Untreated Peat Soil	MRFPDDVSPTRRTLTSMLNLKKPTKQYYNEYEAAHALCISLEALYDVLDKHIFNREHPRPEILEFTHAELLLISVWAEPERGRNVLAMPS
Ga0370492_0007279_1351_1581	3300034282	Untreated Peat Soil	MLTLRKSMNQYYNEAEAARTLCITIDALRNILDEHIFDVAHPRPAVLEFTYAELLLLSVWAEPERGGNVVAMPSKT
Ga0370492_0011372_2144_2374	3300034282	Untreated Peat Soil	MLTLKKPTKQYYSEVEAAHNLGISAEALYELLDEHIFNLEHPRPAVLEFTHAELLLLSVWAKPARGRNVVNISPRD
Ga0370492_0312902_289_519	3300034282	Untreated Peat Soil	MLTLKKPMKQYYTEAEAAHSLCISLESLHEILDKHVFNDEHPRPAVLEFTHAELLLLSVWAEPVRGCNVVSMPSRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters