Metagenome / Metatranscriptome Family F083611

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083611
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	70 residues
Representative Sequence	MSGKKARARKKKSERRDANAANTANAGEAIPRLPNHLVVAHILRSEYFDDPADLARLPAVSRAMR
Number of Associated Samples	44
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	2.68 %
% of genes near scaffold ends (potentially truncated)	75.89 %
% of genes from short scaffolds (< 2000 bps)	66.96 %
Associated GOLD sequencing projects	39
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Eukaryota (52.679 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (59.821 % of family members)
Environment Ontology (ENVO)	Unclassified (57.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (47.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.46% β-sheet: 0.00% Coil/Unstructured: 50.54%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13637	Ank_4	2.68
PF00106	adh_short	1.79
PF15519	RBM39linker	1.79
PF12796	Ank_2	1.79
PF15982	TMEM135_C_rich	1.79
PF13606	Ank_3	1.79
PF00076	RRM_1	1.79
PF02493	MORN	1.79
PF01015	Ribosomal_S3Ae	0.89
PF08373	RAP	0.89
PF03460	NIR_SIR_ferr	0.89
PF08449	UAA	0.89
PF02966	DIM1	0.89
PF12937	F-box-like	0.89
PF13499	EF-hand_7	0.89
PF08190	PIH1	0.89
PF00254	FKBP_C	0.89
PF03109	ABC1	0.89
PF04417	DUF501	0.89
PF01789	PsbP	0.89
PF01765	RRF	0.89
PF02405	MlaE	0.89
PF08572	PRP3	0.89
PF06544	DUF1115	0.89
PF01494	FAD_binding_3	0.89
PF01217	Clat_adaptor_s	0.89
PF07717	OB_NTP_bind	0.89
PF00118	Cpn60_TCP1	0.89
PF13639	zf-RING_2	0.89
PF12738	PTCB-BRCT	0.89
PF00899	ThiF	0.89
PF03055	RPE65	0.89
PF13418	Kelch_4	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.79
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	1.79
COG4642	Uncharacterized conserved protein	Function unknown [S]	1.79
COG0233	Ribosome recycling factor	Translation, ribosomal structure and biogenesis [J]	0.89
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.89
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.89
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.89
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.89
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1507	Uncharacterized conserved protein, DUF501 family	Function unknown [S]	0.89
COG1643	HrpA-like RNA helicase	Translation, ribosomal structure and biogenesis [J]	0.89
COG1890	Ribosomal protein S3AE	Translation, ribosomal structure and biogenesis [J]	0.89
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.57 %
Unclassified	root	N/A	46.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.68 %
Unclassified	root	N/A	46.43 %
Viruses	superkingdom	All Organisms → Viruses	0.89 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	52.68 %
Unclassified	root	N/A	46.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	49.11 %
Unclassified	root	N/A	46.43 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	48.21 %
Unclassified	root	N/A	46.43 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Mamiellophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae	45.54 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Mamiellales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales	45.54 %
PX clade	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Mamiellaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae	40.18 %
Bathycoccaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae	1.79 %
Phaeophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Micromonas	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	39.29 %
Bathycoccus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus	1.79 %
Mantoniella	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Mantoniella	0.89 %
Ectocarpales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Micromonas pusilla	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	24.11 %
Micromonas commoda	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	3.57 %
Bathycoccus prasinos	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos	1.79 %
Mantoniella antarctica	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Mantoniella → Mantoniella antarctica	0.89 %
Ectocarpaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Micromonas commoda	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	3.57 %
Micromonas pusilla CCMP1545	strain	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla → Micromonas pusilla CCMP1545	1.79 %
Bathycoccus prasinos	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos	1.79 %
Ectocarpus	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus	0.89 %
Mantoniella antarctica	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Mantoniella → Mantoniella antarctica	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Micromonas commoda	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	3.57 %
Micromonas pusilla CCMP1545	strain	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla → Micromonas pusilla CCMP1545	1.79 %
Bathycoccus prasinos	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos	1.79 %
Ectocarpus siliculosus	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus → Ectocarpus siliculosus	0.89 %
Mantoniella antarctica	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Mantoniella → Mantoniella antarctica	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2043231002\|Landsort10m_GCH9ZVC01DHGMN	Not Available	513	Open in IMG/M
3300005912\|Ga0075109_1230830	Not Available	566	Open in IMG/M
3300005933\|Ga0075118_10033072	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla → Micromonas pusilla CCMP1545	2013	Open in IMG/M
3300005933\|Ga0075118_10102979	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales	999	Open in IMG/M
3300005933\|Ga0075118_10108963	Not Available	964	Open in IMG/M
3300005933\|Ga0075118_10187530	Not Available	676	Open in IMG/M
3300005933\|Ga0075118_10192629	Not Available	664	Open in IMG/M
3300005933\|Ga0075118_10257510	Not Available	545	Open in IMG/M
3300005933\|Ga0075118_10286875	Not Available	505	Open in IMG/M
3300009172\|Ga0114995_10001171	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	18604	Open in IMG/M
3300009172\|Ga0114995_10020388	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	3975	Open in IMG/M
3300009172\|Ga0114995_10055850	All Organisms → Viruses → Predicted Viral	2247	Open in IMG/M
3300009172\|Ga0114995_10060794	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	2143	Open in IMG/M
3300009172\|Ga0114995_10282609	Not Available	915	Open in IMG/M
3300009172\|Ga0114995_10295274	Not Available	893	Open in IMG/M
3300009172\|Ga0114995_10644167	Not Available	579	Open in IMG/M
3300009420\|Ga0114994_10613683	Not Available	713	Open in IMG/M
3300009422\|Ga0114998_10010333	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	6104	Open in IMG/M
3300009422\|Ga0114998_10017359	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	4370	Open in IMG/M
3300009422\|Ga0114998_10028394	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	3174	Open in IMG/M
3300009425\|Ga0114997_10535205	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	622	Open in IMG/M
3300009432\|Ga0115005_10515511	Not Available	954	Open in IMG/M
3300009432\|Ga0115005_11437554	Not Available	564	Open in IMG/M
3300009432\|Ga0115005_11735178	Not Available	513	Open in IMG/M
3300009441\|Ga0115007_10001047	All Organisms → cellular organisms → Eukaryota → Viridiplantae	18022	Open in IMG/M
3300009441\|Ga0115007_10002257	All Organisms → cellular organisms → Eukaryota	11942	Open in IMG/M
3300009441\|Ga0115007_10002534	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	11208	Open in IMG/M
3300009441\|Ga0115007_10006615	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	6916	Open in IMG/M
3300009441\|Ga0115007_10008789	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	6024	Open in IMG/M
3300009512\|Ga0115003_10000153	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	55577	Open in IMG/M
3300009512\|Ga0115003_10009687	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales	6835	Open in IMG/M
3300009512\|Ga0115003_10342895	Not Available	882	Open in IMG/M
3300009526\|Ga0115004_10016192	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	5290	Open in IMG/M
3300009526\|Ga0115004_10031775	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos	3518	Open in IMG/M
3300009526\|Ga0115004_10144386	Not Available	1441	Open in IMG/M
3300009526\|Ga0115004_10346977	Not Available	879	Open in IMG/M
3300009705\|Ga0115000_10404612	Not Available	869	Open in IMG/M
3300009705\|Ga0115000_10491810	Not Available	773	Open in IMG/M
3300009705\|Ga0115000_10592020	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla → Micromonas pusilla CCMP1545	691	Open in IMG/M
3300009705\|Ga0115000_10988540	Not Available	513	Open in IMG/M
3300009705\|Ga0115000_11006702	Not Available	508	Open in IMG/M
3300010883\|Ga0133547_10871448	Not Available	1758	Open in IMG/M
3300010883\|Ga0133547_11609245	Not Available	1213	Open in IMG/M
3300010883\|Ga0133547_12040081	Not Available	1048	Open in IMG/M
3300010883\|Ga0133547_12063575	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	1041	Open in IMG/M
3300016871\|Ga0186591_104068	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	1969	Open in IMG/M
3300016871\|Ga0186591_106358	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	1272	Open in IMG/M
3300020396\|Ga0211687_10252930	Not Available	702	Open in IMG/M
3300020396\|Ga0211687_10304549	Not Available	627	Open in IMG/M
3300022833\|Ga0222645_100157	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	40583	Open in IMG/M
3300022833\|Ga0222645_103076	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	5118	Open in IMG/M
3300022833\|Ga0222645_109033	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	1932	Open in IMG/M
3300022833\|Ga0222645_118067	Not Available	1030	Open in IMG/M
3300022841\|Ga0222644_1042713	Not Available	540	Open in IMG/M
3300022844\|Ga0222687_1024651	All Organisms → cellular organisms → Eukaryota	1255	Open in IMG/M
3300022847\|Ga0222633_1003038	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	6302	Open in IMG/M
3300022847\|Ga0222633_1009005	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	2180	Open in IMG/M
3300023243\|Ga0222630_1024702	All Organisms → cellular organisms → Eukaryota	1254	Open in IMG/M
3300025513\|Ga0208413_1134951	Not Available	628	Open in IMG/M
3300025603\|Ga0208414_1067646	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	979	Open in IMG/M
3300025603\|Ga0208414_1072260	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	939	Open in IMG/M
3300025603\|Ga0208414_1163215	Not Available	549	Open in IMG/M
3300025603\|Ga0208414_1181490	Not Available	510	Open in IMG/M
3300027687\|Ga0209710_1000095	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	100387	Open in IMG/M
3300027687\|Ga0209710_1000401	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	42119	Open in IMG/M
3300027687\|Ga0209710_1000683	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	29467	Open in IMG/M
3300027801\|Ga0209091_10381345	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	643	Open in IMG/M
3300027810\|Ga0209302_10006772	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	6816	Open in IMG/M
3300027810\|Ga0209302_10043419	Not Available	2433	Open in IMG/M
3300027810\|Ga0209302_10047064	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	2315	Open in IMG/M
3300027810\|Ga0209302_10244393	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	846	Open in IMG/M
3300028194\|Ga0257106_1038345	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	1851	Open in IMG/M
3300028194\|Ga0257106_1064005	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	1364	Open in IMG/M
3300028194\|Ga0257106_1069305	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Mantoniella → Mantoniella antarctica	1302	Open in IMG/M
3300028194\|Ga0257106_1106168	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos	1010	Open in IMG/M
3300030721\|Ga0308133_1010467	Not Available	1309	Open in IMG/M
3300030724\|Ga0308138_1046840	Not Available	608	Open in IMG/M
3300031252\|Ga0307494_1021185	Not Available	658	Open in IMG/M
3300031252\|Ga0307494_1030255	Not Available	582	Open in IMG/M
3300031519\|Ga0307488_10043768	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	3508	Open in IMG/M
3300031519\|Ga0307488_10833380	Not Available	507	Open in IMG/M
3300031523\|Ga0307492_10158039	Not Available	794	Open in IMG/M
3300031569\|Ga0307489_10480125	Not Available	842	Open in IMG/M
3300031569\|Ga0307489_10750954	Not Available	684	Open in IMG/M
3300031569\|Ga0307489_10850106	Not Available	645	Open in IMG/M
3300031569\|Ga0307489_10934166	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	617	Open in IMG/M
3300031569\|Ga0307489_11085086	Not Available	575	Open in IMG/M
3300031579\|Ga0308134_1002934	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	3553	Open in IMG/M
3300031588\|Ga0302137_1024043	Not Available	2673	Open in IMG/M
3300031588\|Ga0302137_1085924	Not Available	1223	Open in IMG/M
3300031588\|Ga0302137_1130028	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus → Ectocarpus siliculosus	931	Open in IMG/M
3300031588\|Ga0302137_1222463	Not Available	644	Open in IMG/M
3300031594\|Ga0302131_1017930	Not Available	3001	Open in IMG/M
3300031596\|Ga0302134_10293914	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	621	Open in IMG/M
3300031597\|Ga0302116_1002843	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	10020	Open in IMG/M
3300031597\|Ga0302116_1094810	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	997	Open in IMG/M
3300031621\|Ga0302114_10002637	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	11468	Open in IMG/M
3300031621\|Ga0302114_10038001	Not Available	2442	Open in IMG/M
3300031621\|Ga0302114_10084933	Not Available	1481	Open in IMG/M
3300031621\|Ga0302114_10152105	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	1014	Open in IMG/M
3300031621\|Ga0302114_10204794	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	827	Open in IMG/M
3300031621\|Ga0302114_10370266	Not Available	542	Open in IMG/M
3300031622\|Ga0302126_10000567	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales	23535	Open in IMG/M
3300031622\|Ga0302126_10187100	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	746	Open in IMG/M
3300031626\|Ga0302121_10122173	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	755	Open in IMG/M
3300031676\|Ga0302136_1000077	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	52594	Open in IMG/M
3300031676\|Ga0302136_1019670	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales	2478	Open in IMG/M
3300031683\|Ga0308006_10208131	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	608	Open in IMG/M
3300031706\|Ga0307997_10073456	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	1395	Open in IMG/M
3300031706\|Ga0307997_10134377	Not Available	958	Open in IMG/M
3300031706\|Ga0307997_10234449	Not Available	667	Open in IMG/M
3300031848\|Ga0308000_10344327	Not Available	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.21%
Human	Host-Associated → Human	1.79%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	78.57%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	19.64%
Digestive System	Host-Associated → Human → Digestive System	1.79%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	63.39%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	19.64%
Coastal	Environmental → Aquatic → Marine → Coastal	8.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.25%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	63.39%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	19.64%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.25%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.79%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	59.82%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	9.82%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	8.04%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	8.04%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.57%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.79%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.79%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.79%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2043231002	10 m water depth	Environmental	Open in IMG/M
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300005933	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300016871	Metatranscriptome of marine eukaryotic communities from Arctic in K medium with Eastern Pacific seawater w/o silicate, 6 C, 35 psu salinity and 535 ?mol photons light - micromonas sp. CCMP2099 (MMETSP0802)	Host-Associated	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300022833	Saline water microbial communities from Ace Lake, Antarctica - #292	Environmental	Open in IMG/M
3300022841	Saline water microbial communities from Ace Lake, Antarctica - #291	Environmental	Open in IMG/M
3300022844	Saline water microbial communities from Ace Lake, Antarctica - #1163	Environmental	Open in IMG/M
3300022847	Saline water microbial communities from Ace Lake, Antarctica - #48	Environmental	Open in IMG/M
3300023243	Saline water microbial communities from Ace Lake, Antarctica - #3	Environmental	Open in IMG/M
3300025513	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD (SPAdes)	Environmental	Open in IMG/M
3300025603	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300030721	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1117_20m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030724	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_949_20m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031252	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SW 0.2	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031523	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SI3L	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031579	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1120_Surface (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031596	Marine microbial communities from Western Arctic Ocean, Canada - CB9_SCM	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031676	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_20m	Environmental	Open in IMG/M
3300031683	Marine microbial communities from water near the shore, Antarctic Ocean - #69	Environmental	Open in IMG/M
3300031706	Marine microbial communities from David Island wharf, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031848	Marine microbial communities from water near the shore, Antarctic Ocean - #3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
10m_1179750	2043231002	Marine	MSGKKARARKKKSQRRRDAAAGEEFAGLPDHLVVEHVLRSEHFDDPADLARLPAVSRAMRDAVTGTGLTFEELGEDE
Ga0075109_12308302	3300005912	Saline Lake	MAGKKSRAREKKNELRDANAANTANAGEAFLRLPNHLVVTHILRTEHFDYPADLARLPAVSR
Ga0075118_100330724	3300005933	Saline Lake	MSGKKARARKEKRGRRRDANAGEAIPRLPNHLVVTHVLRSEYFDDDADLARLPAVSRAMRDLVAETGLR
Ga0075118_101029791	3300005933	Saline Lake	MACKKARAREKKSGRRDANAANTANAFARLPNHLVVAHILRSEYFDDDADLARLPAVSRAMR
Ga0075118_101089632	3300005933	Saline Lake	MACKKARAREKKSERRDANAANTGEAFPRLPDHLVVTHILRSEYFDDDADLARLPAVSRAMRDLVAETG
Ga0075118_101875302	3300005933	Saline Lake	KKARARKKKRERRDANAANAANAGEAIPGLPDHLVVEHILRSEHFDDPADLARLPAVSRLMRDAVASTGFSLKSLTKNVPCSSDV*
Ga0075118_101926291	3300005933	Saline Lake	MSGKKARARKKKKERRDANAADTANAGEAIPGLLNDIVVTHVLRSGHFDDPADLARLPAVSRAMRDA
Ga0075118_102575101	3300005933	Saline Lake	MSGKKARARKQKRERRRDANAGEAIPRLPNHLVATHVLRSEYFDDPADLARLPAVSRAMRDA
Ga0075118_102868752	3300005933	Saline Lake	MGGKKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMRD
Ga0114995_1000117110	3300009172	Marine	MPGKKARARKKEKRERRDANASNTANAGEAIPRLLNDIVVTHILRSENFDDPADLARLPAVSRAMRDAMAATGLRFEELDEVDAAE
Ga0114995_100203881	3300009172	Marine	MGGKKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSR
Ga0114995_100558501	3300009172	Marine	MSGKKARARKKKKERRDVNAAYTANAGEAFPRLPNHLVVAHILRSEYYDDPADLARLPAVSRAMRDVVA*
Ga0114995_100607941	3300009172	Marine	MSGKKARARKERRERRRDAAAGEAFHRLPNHLVATHILRSEYFDDPADLARLPAVS
Ga0114995_102826092	3300009172	Marine	MSGKKARARKQKRERRDANAANAANAGEAFPRLPNHLVVTHILRSEYYDDDADLARLPAVSRAMRDTVAETGLRFRSLMKSVPWSSDV*
Ga0114995_102952741	3300009172	Marine	MSGKKARARKKKRERRDANAANAANAGEAIPGLPDHLVVEHILRSEHFDDPADLARLPAVSRLMRDAVASTGFSLKSLTKSVPCSSDV*
Ga0114995_106441672	3300009172	Marine	MAGKKARAREKKSGRCDANAANTANAGEAIPGLLNDIVFAHVLRPEYFDDPADLARLPAVSLAMR
Ga0114994_106136831	3300009420	Marine	MAGKKAHTREKKNGRRDANTANTANAGEAFPRLPNHLVATLILRSENFDDPADLARLPAVSRAMRDLVAETGLRFKELDEKRAVE
Ga0114998_100103331	3300009422	Marine	MGGEKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSR
Ga0114998_100173591	3300009422	Marine	MSGKKARARKKKKERRDVNAAYTANAGEAFPRLPNHLVVAHILRSEYYDGPADLARLPAVSRAMRDVVA*
Ga0114998_100283943	3300009422	Marine	MSGKKARARKKKKERHDANAADTANAGEAIPGLLNDIVVTHFLRTGHFDDPADLARLPAVSRAMRDAVAATGLQFKQLTEEQLWTLDV*
Ga0114997_105352052	3300009425	Marine	MAGKKSRARETKNELRDANAANTANAGEAFLRLPNHLVVTHILRSEHFDYPADLARLPAVSRTMRDL
Ga0115005_105155111	3300009432	Marine	MSGKKARARKQKRERRDANAANAANAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMRDAVAETGL
Ga0115005_114375542	3300009432	Marine	MAGKKAHTREKKNGRRDANTANTANAGEAFPRLPNHLVATLILRSENFDDPADLARLPAVSRAMRDLVAETG
Ga0115005_117351781	3300009432	Marine	MSGKKARARKKKKERRDANAANTANAGEAIPRLPNHLVVTHVLRSEHFDDPADLARLPAVSR
Ga0115007_100010471	3300009441	Marine	MSGKKARARKQKRERRRDANAGEAFPRLPNHLVVTHVLRSECFDDPADLARLPAVSRAMRDAVAETG
Ga0115007_100022578	3300009441	Marine	MGGKKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMRD*
Ga0115007_1000253414	3300009441	Marine	MSGKNVRARKKKRERRDANAANTANAGEAIPGLLNEIVVTHVLTSDHFDDPADLARLPAVSRAMRDAVVATGLRFEDIDADEAVELGRLSVL
Ga0115007_100066156	3300009441	Marine	MSGKKARARKKKKERRDANAADTANAGEAIPGLLNDIVVTHFLRSGHFDDPADLARLPAVSRAMRDAVAATGLQFKQLTEEQLWTLDV*
Ga0115007_100087891	3300009441	Marine	MSGKKARARKEKRERSRDANAGEAIPGLLNDIVVTHVLRSDNFDDPADLARLPAVSRA
Ga0115003_100001532	3300009512	Marine	MSGKKARARKKKKERHDANAADTANAGEAIPGLLNDIVVTHFLRSGHFDDPADLARLPAVSRAMRDAVAATGLQFKQLTEEQLWTLDV*
Ga0115003_100096871	3300009512	Marine	MSGKKARARKKKKERRDVNAANTANAGEAFPRLPNHLVVAHILRSEYYDDPADLARLPAVSRAMRDVVA*
Ga0115003_103428951	3300009512	Marine	MAVKKARAREKKSGRRDANAANTANAGEAFTRLPNHLVVTHVLRPEYFDYPADLARLPAVSRAMRDLVAETGLRF
Ga0115004_100161926	3300009526	Marine	MAGKKARTRKKGKCERRDANAANTAMAGEAIPGLPDHLVVEHILRSEYFDDPADLARLPTVS
Ga0115004_100317755	3300009526	Marine	MSGKKDRTRKEKRERGRDANAGEAFARLPNHLVVTHVLRPEYFVDPADLARLPAVSRAMRDLVAETGLRFKELDE
Ga0115004_101443863	3300009526	Marine	MSGKKARARKEKCERRRDANAGEAFARLPNHLVVTHILRSEYFDDDADLARLPAVSRAMRDLVAET
Ga0115004_103469772	3300009526	Marine	MAGKKARAREKKSGRCDANAANTANAGEAIPGLLNDIVFAHVLRPEYFDDPADLARLPAVSLAMRDLVAETGLRFEEL
Ga0115000_104046121	3300009705	Marine	MSGKKARARKEKRERRRDANAGDAFTRLPNHLVVTHILRSEYFDDPADLARLPAVSRAMR
Ga0115000_104918101	3300009705	Marine	MPGKKARARKKEKRERRDANASNTANAGEAIPRLLNDIVVTHILRSENFDDPADLARLPAVSRAMRDAVAATGLRFEELDE
Ga0115000_105920201	3300009705	Marine	MASKKARARKKKSRSRDTNAANGGEAIPGLPNHLVVADILRSEYFDDPADL
Ga0115000_109885401	3300009705	Marine	MSGKKTRARKKKRERRDANAANTANAGEAIPGLLNDIVITHVLRSEHFDDPADLARLPAV
Ga0115000_110067021	3300009705	Marine	MAGKEARARKQKRERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMRD*
Ga0133547_108714482	3300010883	Marine	MSGKKARARKEKRERRDANAANKANAGEAIPGLLNDIVVTHVLRSEHFDDPADLARLPAV
Ga0133547_116092452	3300010883	Marine	MSGKKDRTRKEKRERGRDANAGEAFARLPNHLVVTHVLRPEYFDDPADLARLPAVSRAMRDLVAETGLRFK
Ga0133547_120400811	3300010883	Marine	MSGKKARARKEKRERRRDANAGDAFTRLPNHLVATHILRSEYFDDPADLARLPAVSRAMRDAVAETGLRLKEL
Ga0133547_120635752	3300010883	Marine	MSGKKARARKKKKERRDVNAANTANAGEAFPRLPNHLVVAHILRSEYYDDPADLARFPAVSRAMRDVVA*
Ga0186591_1040682	3300016871	Host-Associated	MSGKKARARKEKRGRRRDANAGEAIPGLLNDIVVTHVLRSEHFDDPADLARLPAVSRA
Ga0186591_1063582	3300016871	Host-Associated	MTKRRTTTRTQTIAMSGKNARARKKKSERRDANAANMANAGEAIPGLLNDIVVTHILRSEYFDDPADL
Ga0211687_102529301	3300020396	Marine	MAGKKARALEKKSERRDARAANAGDNIPGLLNDIVVTHIFRSDNFDIPQISQGCQR
Ga0211687_103045491	3300020396	Marine	MAVKKARARKKKGERRDVNAANAANAGEAIPGLPNHLVVEHILRSEYFDDP
Ga0222645_1001572	3300022833	Saline Water	MGGKKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMRDLVAETGLRLKELDEK
Ga0222645_1030762	3300022833	Saline Water	MSGKKARARKKKRERRDANAANAANAGEAIPGLPDHLVVEHILRSEHFDDPADLARLPAVSRLMRDAVASTGFSLKSLTKNVPCSSDV
Ga0222645_1090332	3300022833	Saline Water	MSGKKARARKKKSERRDANAGEAIPRLPNHLVVAHILRSEYFDDPADLA
Ga0222645_1180672	3300022833	Saline Water	MSGKKARARKQKRERRDANAANAANAGEAFPRLPNHLVVTHILRSEYYDDDADLARLPAVSRAMRDTVAETGLRFRSLMKSVPWSSDV
Ga0222644_10427131	3300022841	Saline Water	MSGKKARARKQKRERRDANAANTANAGEAIPGLFNDIVVTHVLRSGHFDDPADLARLPAVSRAMRDAVAATGLR
Ga0222687_10246512	3300022844	Saline Water	MSGKKARARKKKRERRDANAANTANAGEAIPGLLDDIVVTHVLRYEHFDDPADLARLPAVSRAMRDAVAETGLRF
Ga0222633_10030386	3300022847	Saline Water	MSGKKARARKKKSERRDANAANTANAGEAIPRLPNHLVVAHILRSEYFDDPADLARLPAVSRAMR
Ga0222633_10090051	3300022847	Saline Water	MSGKKARARKKKSERRDANAGEAIPRLPNHLVVAHILRSEYFDDPADLARLPAVSRAMR
Ga0222630_10247022	3300023243	Saline Water	MSGKKARARKKKRERRDANAANTANAGEAIPGLLDDIVVTHVLRYEHFDDPADLARLPAVSRAMRDAV
Ga0208413_11349512	3300025513	Saline Lake	MSGKKARARKKKKERRDANAANTANAGDAIPGLLNDIVVTHVLRSEHFDDPADLA
Ga0208414_10676461	3300025603	Saline Lake	MAGKKSRAREKKNELRDANAANTANAGEAFLRLPNHLVVTHILRTEHFDYPADLARLPAVSRTMRDLVAETGLRLKELDEKRAVELG
Ga0208414_10722602	3300025603	Saline Lake	MSGKKARARKKKKERRDVNAAYTANAGEAFPRLPNHLVVAHILRSEYYDDPADLARLPAVSRAMRDVVA
Ga0208414_11632151	3300025603	Saline Lake	MSGKKARARKQKRERRDANAANAANAGEANPGLLNDIVVTHVLRSEYFDDPADLARLP
Ga0208414_11814902	3300025603	Saline Lake	MSGKKARARKKKRERRDANAANTANAGEAIPGILNDTVVTHVLRSEHFDDPADLARLPAVSRAMRDAVA
Ga0209710_100009590	3300027687	Marine	MGGEKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMRD
Ga0209710_10004011	3300027687	Marine	MSGKKARARKQKSARRIANAANTANAGEAIPGLLDDIVITHVLRSEHFDDPADLARLKAVSCAMRKAVAEK
Ga0209710_100068317	3300027687	Marine	MSGKKARARKKKRERRDANAANAANAGEAIPGLPDHLVVEHILRSEHFDDPADLARLPAVSRLMRDAVASTGFSLKSLTKSVPCSSDV
Ga0209091_103813451	3300027801	Marine	MSGKKARARKQKRERRRDANAGEAIPGLPDHLVVEHILRSEYFDDPEDLARLPALSRGMRAAV
Ga0209302_100067727	3300027810	Marine	MSGKKARARKKKSERRDANAANTANAGEAIPGLLNDIVVTHVLRSEHFDDPADLARL
Ga0209302_100434191	3300027810	Marine	MAGKEARARKQKRERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRA
Ga0209302_100470642	3300027810	Marine	MSGKKARARKKKRERRDANAANAANAGEAIPGLPDHVVVEHILRSEHFDDPADLARLPAVSRLMRDAVASTGFSLKSLTKSVPCSSDV
Ga0209302_102443931	3300027810	Marine	MSGKKARARRKKSERRVANAANTAFAGEAIPGLLNDIVVTHILGSDVLADPVDLARVRAVSRAMHGAVAA
Ga0257106_10383453	3300028194	Marine	MAGKKARALEKKSERRDARAANAGDNIPGLLNDIVVMHIFRSDNFDIPQISQGCQR
Ga0257106_10640052	3300028194	Marine	MAGKKARALEKKSERLEARRDARAANAGNAIPGLLNDIVVTHFLRCDNFDYPAYLARLPAVSSTMHDTVAAT
Ga0257106_10693052	3300028194	Marine	MFADAMGTLGLKKKREHDAHAGEAIPGLPNQLVIANIFRSAYFDDPADLARLKAVSRTMRDAVAETGLEF
Ga0257106_11061681	3300028194	Marine	MAGKKARARKKKGERRDVNAANAANAGEAIPGLPNHLVVEHILRSEYFDDPADLARLPA
Ga0308133_10104671	3300030721	Marine	MSGKKARARKEKRERRRDANAGEAIPGLPDHVVATDILRSEYFDDPADLARLPAVSRAMRDT
Ga0308138_10468401	3300030724	Marine	MSGKKARARKQKRERRDANAANAANAGEANPGLLNDIVVTHVLRSEYFDDPADLARLPAVSRAMRDAVAATGLTFEELDE
Ga0307494_10211851	3300031252	Sackhole Brine	MSGKKARARKKKSQRRRDAAAGEEFAGLPDHLVVEHVLRSEHFDDPADLARLPAVSRAMRAAVAETGLRFKELDEVEAVR
Ga0307494_10302551	3300031252	Sackhole Brine	MACKKARAREKKSERRDANAANTGEAFPRLPDHLVVTHILRSEYFDDDADLARLPAVSRA
Ga0307488_100437682	3300031519	Sackhole Brine	LCFNAMSGKKARARKKKKERRDVNAAYTANAGEAFPRLPNHLVVAHILRSEYYDDPADLARLPAVSRAMRDVVA
Ga0307488_108333802	3300031519	Sackhole Brine	ARKQKRERRDANAANAANAGEAFPRLPNHLVVTHILRSEYYDDDADLARLPAVSRAMRDTVAETGLRFRSLMKSVPWSSDV
Ga0307492_101580392	3300031523	Sea-Ice Brine	MSGKKARARKEKKERRRDANAGEAIPGLLNDIVVTHVLRSDHFDDPADLARLPAVS
Ga0307489_104801251	3300031569	Sackhole Brine	MPGKKARARKKKSERRDANSANAANGGEAIPGLLNDIVIAHVLRSDLARLPAVSHAMRDAVAATGLQ
Ga0307489_107509541	3300031569	Sackhole Brine	MTGKKARARKKKSERRDANAGNAAIAGEAIPGLPDHLVATQILRSEYFDDPADLARLPAVSRAMRDAVAETVIRF
Ga0307489_108501062	3300031569	Sackhole Brine	MSGKKARARKKKKERRDANTANTANAGEAFPRLPNHLVVTHVLRSEYYDDPADLARLPAVSRAMRDAVAETGFGLRSLMRMQP
Ga0307489_109341661	3300031569	Sackhole Brine	MSGKKARARKQKRERRRDANAGEAIPGLPDHLVVEHILRSEYFDDPEDLARLPALSRGMRAAVAATGLRFKELGEQPAMMLGCLSV
Ga0307489_110850862	3300031569	Sackhole Brine	MSGKKARARKKKKERRDANAANTANAGDAIPGLLNDIVVTHVLRSEHFDDPADLARLPAVSRAM
Ga0308134_10029343	3300031579	Marine	MAGRKARARKKKSERRDANSAANAANAGEVIPGLPDHLVAAHVLRSEFFDDPADLARLPAVSRAIRD
Ga0302137_10240431	3300031588	Marine	MSGKKARARKQKRERRDANAANAANAGEAFPRLPNHLVVTHILRSEYYDDDADLARLPAVSRAMRDTVAEAGLRFRSLMKS
Ga0302137_10859241	3300031588	Marine	MAGKEARARKQKRERRDANAANTANAGEAFPRLPNHLVVTHILRSEYFDDDADLARLPAV
Ga0302137_11300282	3300031588	Marine	MSGKKARARKKKKERHDANAADTANAGEAIPGLLNDIVVTHFLRSGHFDDPADLARLPAVSRAMRDAVAATGLQFKQLTEEQLWTLDV
Ga0302137_12224632	3300031588	Marine	MPGKKARARKKKSERRDANSANAANGGEAIPGLLNDIVIAHVLRSDLARLQAVSHAMRDAVA
Ga0302131_10179301	3300031594	Marine	MSGKKARARKQKRERRDANAANAANAGEAFPRLPNHLVVTHILRSEYYDDDADLARLPAVSR
Ga0302134_102939142	3300031596	Marine	RARKKKKERRDVNAAYTANAGEAFPRLPNHLVVAHILRSEYYDDPADLARLPAVSRAMRDVVA
Ga0302116_10028431	3300031597	Marine	MGGEKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRA
Ga0302116_10948102	3300031597	Marine	MSGKKARARKQKRERRRDANAGEAIPGLPDHLVVEHILRSEYFDDPEDLARLPALSRGMRAAVAATGLRFKELGEQPA
Ga0302114_1000263710	3300031621	Marine	MSGKKARARKKKSERRDANAANMANAGEAIPGLLNDIVVTHILRSEHFDDPADLARLPAV
Ga0302114_100380011	3300031621	Marine	MSGKKARARKEKCERRRDANAGEAFARLPNHLVVTHILRSEYFDDDADLARLPAVSRAMRDLVAETG
Ga0302114_100849333	3300031621	Marine	MAGKKARAREKKSGRCDANAANTANAGEAIPGLLNDIVFAHVLRPEYFDDPADLARLPAVSLAMRDLVAETGL
Ga0302114_101521052	3300031621	Marine	MSGKKARARKKKKERRDVNAANTANAGEAFPRLPNHLVVAHILRSEYYDDPADLARFPAVSRAMRDVVA
Ga0302114_102047942	3300031621	Marine	SSNAMSGNKARARKKKRERRDANAANTANAGEAIPGLLDDIVITHVLRSEYFDDPADLARLLR
Ga0302114_103702661	3300031621	Marine	MPGKKARARKKKSERRHANSANAANGGEAIPGLLNDIVIAHVLRSDLARLPAVSHAMRDAVAATGLQFEDI
Ga0302126_1000056713	3300031622	Marine	MSGKKARARKKKKERHDANAADTANAGEAIPGLLNDIVVTHFLRTGHFDDPADLARLPAVSRAMRDAVAATGLQFKQLTEEQLWTLDV
Ga0302126_101871001	3300031622	Marine	MGGKKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMR
Ga0302121_101221732	3300031626	Marine	MGGKKARAREKKSERRDANAANTAIAGEAFPRLPNHLVVTHILRSEHFDDDADLARLPAVSRAMRDL
Ga0302136_10000771	3300031676	Marine	GKKARARKKKKERHDANAADTANAGEAIPGLLNDIVVTHFLRTGHFDDPADLARLPAVSRAMRDAVAATGLQFKQLTEEQLWTLDV
Ga0302136_10196701	3300031676	Marine	MACKKARAREKKSGRRDANAANTANAFARLPNHLVVAHILRSEYFDDDADLARLPAVSRAMRDLV
Ga0308006_102081312	3300031683	Marine	MSGKKARARKQKRERRRDANAGEAIPGLPDHLVVEHILRCGHFDDPADLA
Ga0307997_100734561	3300031706	Marine	MSGKKARARKQKRERRDANAGEVIPGLLNDIVVTHVLRSEYFDDPADLARLPAVSRAMRDAVAGTGLRFKELDEDDAVELGCLS
Ga0307997_101343771	3300031706	Marine	MAGKKARTRKKGNCERRDANAANTAMAGEAIPGLPDHLVVEHILRSEYFDDPADLARLPTVSRAMRDAVAET
Ga0307997_102344491	3300031706	Marine	MSGKKARARKKKKERRDANAADTANAGEAIPGLLNDIVVTHVLRSGHFDDPADL
Ga0308000_103443272	3300031848	Marine	MSGKKARARKEKRERGRDANAGEAFPRLPNHLVVTHVLRSEYFDDPADLARLPAVSRAMRAAVAETGLRLKDLGEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083611

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences