Metagenome / Metatranscriptome Family F079740

Basic Information
Family ID	F079740
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	52 residues
Representative Sequence	MRTQKIDFPDRQTLCVFPHERSNLAQAISELGLKGRYPVIVLIGGE
Number of Associated Samples	101
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.33 %
% of genes near scaffold ends (potentially truncated)	13.04 %
% of genes from short scaffolds (< 2000 bps)	12.17 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (95.652 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (13.043 % of family members)
Environment Ontology (ENVO)	Unclassified (35.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.304 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.51% β-sheet: 16.22% Coil/Unstructured: 70.27%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00571	CBS	3.48
PF01434	Peptidase_M41	1.74
PF04972	BON	1.74
PF08240	ADH_N	0.87
PF01594	AI-2E_transport	0.87
PF11127	DUF2892	0.87
PF01609	DDE_Tnp_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.87
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.87
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.87
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.87
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.87
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.87
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.87

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.65 %
All Organisms	root	All Organisms	4.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.65 %
cellular organisms	root	All Organisms → cellular organisms	4.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.65 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.61 %
Chloroflexi bacterium RIFOXYD12_FULL_57_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RIFOXYD12_FULL_57_15	0.87 %

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0754582	Not Available	679	Open in IMG/M
3300005294\|Ga0065705_10919627	Not Available	569	Open in IMG/M
3300005295\|Ga0065707_10118757	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300005841\|Ga0068863_101530139	Not Available	676	Open in IMG/M
3300009037\|Ga0105093_10528206	Not Available	660	Open in IMG/M
3300009156\|Ga0111538_12723327	Not Available	620	Open in IMG/M
3300009162\|Ga0075423_12637539	Not Available	549	Open in IMG/M
3300010400\|Ga0134122_12634929	Not Available	554	Open in IMG/M
3300011433\|Ga0137443_1208504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RIFOXYD12_FULL_57_15	583	Open in IMG/M
3300014259\|Ga0075311_1068812	Not Available	715	Open in IMG/M
3300018059\|Ga0184615_10414047	Not Available	737	Open in IMG/M
3300020003\|Ga0193739_1052617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1047	Open in IMG/M
3300025922\|Ga0207646_10668176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300025959\|Ga0210116_1068643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300027739\|Ga0209575_10233328	Not Available	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.65%
Host-Associated	Host-Associated	23.48%
Engineered	Engineered	0.87%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	38.26%
Terrestrial	Environmental → Terrestrial	37.39%
Plants	Host-Associated → Plants	23.48%
Wastewater	Engineered → Wastewater	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	33.91%
Sediment	Environmental → Aquatic → Sediment	20.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.26%
Freshwater	Environmental → Aquatic → Freshwater	12.17%
Marine	Environmental → Aquatic → Marine	6.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Peat	Environmental → Terrestrial → Peat	3.48%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.22%
Loam	Environmental → Terrestrial → Soil → Loam	5.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.48%
Lake	Environmental → Aquatic → Freshwater → Lake	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%
Pond	Environmental → Aquatic → Freshwater → Pond	0.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.22%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.87%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.87%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.87%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.87%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.87%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	13.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.09%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.48%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.48%
Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Sediment → Microbial Mat	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.87%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.87%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.87%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000236	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- FS08_3	Environmental	Open in IMG/M
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental	Open in IMG/M
3300004014	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2	Environmental	Open in IMG/M
3300004027	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004266	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012163	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014867	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033446	Microbial mat bacterial communities from Middle Island sinkhole, Lake Huron, Michigan, United States - MIS.2016.202	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034196	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07545824	2228664021	Soil	MRTQTINFPDQQTPCVFPAERSDLAEAISELGLKDHYPVI
TB_FS08_3DRAFT_10576473	3300000236	Groundwater	MRTQKIDFPDRQTLCIFPDKREDLAEAITELQLGGNFPVIVLIGGGIDEQEAEA
Ga0055460_101555631	3300004011	Natural And Restored Wetlands	MRTQTINFPDRQTICVFPDERSDLVQAVSGLGLEGNHPVIVLIGGGIDKREAEATRRA
Ga0055456_101395962	3300004014	Natural And Restored Wetlands	MRTQKIKFPEQEVLCVFPNDRSDLVRAISELRLDDGYPVIVLIGGEIDERQADAT
Ga0055459_101542092	3300004027	Natural And Restored Wetlands	MRTQTINFPDRQTICVFPDERSDLVQAVSGLGLEGNHPVIVLIGGGIDKREAEATRRAIL
Ga0062593_1030587071	3300004114	Soil	MRTQKIEFPSQEVLCAFPSERSELVQAISELKLNDDSYPVIVLIGGAIDEHHADATRRAIQTISRVAEDL
Ga0062589_1003705393	3300004156	Soil	MRYQKIRFADHEVLCVFPDERTNLAKAATELRLEGSYPVIVLIGGDID
Ga0062589_1021916263	3300004156	Soil	MRTQKINFPGGEVLCVFPGESSELVQTISELRLNDGHPVIVLIGGAIDEHQAGATRLAIQTIAGVAQDMQAVVICGGT
Ga0062590_1001267865	3300004157	Soil	MRTDRIYFPKQKTPCVFPDERSNLEQAISELDLKGRYPVIVLIGAEIA
Ga0055457_100987581	3300004266	Natural And Restored Wetlands	MRTQKISFPDRQSLCVFPVQRSDLAQAVSEMQLNDGYPVIVLIGGVIDDLQATATHRGIHTVS
Ga0065704_107180043	3300005289	Switchgrass Rhizosphere	MMRTQAINFPHHQTLCVFPNEHSNLEQAISELGLEIGRPVIVLIGGEFDQQ
Ga0065705_102031361	3300005294	Switchgrass Rhizosphere	MRTQKINFPGQEVLCVFPGERSDLVQAISELQLNNGYPVIVLIGGAIDERQADPTRRAIQTISG
Ga0065705_105288293	3300005294	Switchgrass Rhizosphere	MMRTQAINFPDHQTLCVFPNEPSNLERAISELGLQIGRPVIVLIGGEFDEQQADAIRRAILHICEVAEE
Ga0065705_109196271	3300005294	Switchgrass Rhizosphere	MRTEKIYFQHQQALCVFPNERPDLGQATSELGLKGRYPVIVLIGG
Ga0065707_101187576	3300005295	Switchgrass Rhizosphere	MRTEKIYFQHQQALCVFPAERSDLEQATSELGLKGRYPVIVLIGGEIDEKQADA
Ga0070689_1009644314	3300005340	Switchgrass Rhizosphere	MRTEKIDFPDQQALCVFPEERSDLEQAISELSLNGSYPVIVLIGGEI
Ga0070691_102598291	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRTQKINFPGGEVLCVFPGESSELVQAISELRLNDGHPVIVLIGGAIDEHQAGATRLAIQTIAGVAQDMQAVVICGGTDM
Ga0070698_1001425948	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MMGTQKIYFPERKTPCVFPGQRSELGQATSELHLRGRYPVIVLIGGEIDEQH
Ga0068857_1007024083	3300005577	Corn Rhizosphere	MRTEKIYFPHQQALCVFPTERSDLGQATSEFGLKGRYPVIVLIGGEIDKQIA
Ga0074479_110621632	3300005829	Sediment (Intertidal)	MRAQTIYFPDRQSLCVFPYKRSDLAQAIKDLQLDDGYSVIVLIGGVIDDDQAGATQRAI
Ga0074469_111374764	3300005832	Sediment (Intertidal)	MRTQTINFPDRQTLCVFPDERSDLAQAVSELQLETGYPVIILIGG
Ga0068863_1015301391	3300005841	Switchgrass Rhizosphere	MRTEKIDFPDQQALCVFPEERSDLEQAISELSLNGSYPVIVLIGGEIEGQEADATR
Ga0068858_1005571031	3300005842	Switchgrass Rhizosphere	MTDERKVRMRTQKIDFPERKTPCVFPDERSSLPQAISELGLKGSYPVIVLIGGEIE
Ga0075417_105364283	3300006049	Populus Rhizosphere	MRTQKINFPGGEVLCVFPGESSELVQAISELRLNDGHPVI
Ga0075029_1007122671	3300006052	Watersheds	MVIMRTEKISFPIQQVLCVFPGERSRLVQAISELQLNDGHPVIVLIG
Ga0075421_1019533411	3300006845	Populus Rhizosphere	MRTQKIYFPDRQTRCVFPDERSNLAQAISELGLKG
Ga0075421_1021733873	3300006845	Populus Rhizosphere	MRTQKIEFPSQEVLCAFPSERSELVQAISELKLNDDSYPVIVLIGGAIDEHHADATRRAIQTISRVA
Ga0075431_1013616671	3300006847	Populus Rhizosphere	MRTQKINFPGGEVLCVFPGESSELVQAISELRLNDGHPVIVLIGGAIDEHQAGATRLAIQTIAGIAQD
Ga0075429_1000436991	3300006880	Populus Rhizosphere	MRTETIYFPDQERLSVFPNERSNLAQAIGELGLKGGYPVIVLIGGEIEEHRRDVTRQ
Ga0075424_1003390341	3300006904	Populus Rhizosphere	MKYEEKAIMRTQTIYFPPDQQRLCVFPGQLSNLPQAISELHLNYRYPVIVLIGGE
Ga0075424_1008586471	3300006904	Populus Rhizosphere	MRTQTIYFPDQQASCVFVDEGSNLAQAISELDLQGRYPVIVLIGGELDGQQAEVTRRAIE
Ga0075419_107528222	3300006969	Populus Rhizosphere	MRTQKIEFPGQEVLCAFPGEPSELVQAISELKLNDSYPVIVLIGGAIDEHHADATR
Ga0079218_110916791	3300007004	Agricultural Soil	MRTQKIDFPDGQTLCVFPTERSNLAQAISELHLKGRYPVIVLIGGEIDEQQAE
Ga0105093_105282063	3300009037	Freshwater Sediment	MMRTQKIDFPDRQTLCVFPGERGDLAEAISELKLGGYFPVIV
Ga0105090_101046374	3300009075	Freshwater Sediment	MRTQKIIFPGQEVLCVFPSEPSDLVQAISELRLSDGYPVIVLIGGGINELQADATRRAIQTIV
Ga0105107_100951315	3300009087	Freshwater Sediment	MMRTQKIDFPDRQTLCVFPDDRSNLAQAISELGLKGRYPVIVLIGGEMDEQQAAVTRR
Ga0102851_103549784	3300009091	Freshwater Wetlands	MMRTLKISSPEQQALCVFPDERSNLAQAISELQLEGNHPVIVLIGGN
Ga0075418_118305383	3300009100	Populus Rhizosphere	MRTQRISFPDRQTLCVFPNERSDLAQAIVELGLKGH
Ga0105247_107433801	3300009101	Switchgrass Rhizosphere	MRTEKIDLPDQQALCVFPEERSDLEQAISELSLNGSYPVIVLIG
Ga0115027_114223642	3300009131	Wetland	MRTQKISITDQQSLCVFPDERSDLAQAISELKLGGTFPVIVLIGGGIAEQEE
Ga0114129_134357121	3300009147	Populus Rhizosphere	MMRTEKIYFPHQQALCVFPAERSDLGQATSEFGLKGRYPVIVLIGGDIDKQL
Ga0111538_127233273	3300009156	Populus Rhizosphere	MMRIQTVYFSHHQALCVLPADLSDLEQATSELHLRGRYPVIVLIGGEIDEAQADTTKRAI
Ga0075423_126375391	3300009162	Populus Rhizosphere	MRTEKIDFPDQQTLCVFPEERSSLPQAISELGLKGSYPVIVLIGGEIE
Ga0105100_105164041	3300009166	Freshwater Sediment	MMRTQNINFPEQQTLCVFPGERSDLEESISGLGLEDNHP
Ga0118657_103531076	3300009506	Mangrove Sediment	MRTKTINFPDRQTLCVFPDARSDLAQAVSELQLEDNHPVIVLI
Ga0105249_106260923	3300009553	Switchgrass Rhizosphere	MMRTEKIYFPHQQALCVFPTERSDLGQATSEFGLKGRYPVIVLIGGEIDKQIADATQRA
Ga0105347_11837931	3300009609	Soil	MEESKEIMRTQEISFPDRKTLCVFPDERSELAQAISELQLKDSHPVI
Ga0105252_103127871	3300009678	Soil	MEESKEIMRTQEISFPDRKTLCVFPDERSELAQAISELQLKDSHPVIVLIGGDID
Ga0126311_108977971	3300010045	Serpentine Soil	MRTHKVSFTDHQTLCVFPTERSNLAQAISELGLRSGHPVIVLIGGQMG
Ga0105239_106865954	3300010375	Corn Rhizosphere	MTDERKVRMRTQKIDFPERKTPCVFPDERSSLPQAISELGLKG
Ga0134127_108581631	3300010399	Terrestrial Soil	MRTQKIEFPSQEVLCAFPSERSELAQAISELKLNDDSYPVIVLIGGAIDEHH
Ga0134127_133438382	3300010399	Terrestrial Soil	MSTQTIYFPPDRQTPCVFPSKRSNLQQAIWDLRLKGPYPVIVLIGGEIDKQYAAVTRQ
Ga0134122_126349291	3300010400	Terrestrial Soil	MMRTQRIDFPHHQARCVFPEERSDLEQAISELGLKGRYPVIVLI
Ga0134123_127104972	3300010403	Terrestrial Soil	MRTQKIEFPGQEVLCAFPSERSELAQAISELHLNDSSPVIVLIGGAIDEHHADAARQAIQTISMVAEDLN
Ga0136852_122924341	3300010412	Mangrove Sediment	MRTQKIEFPEQEVLCVFPSERSDLVQAISELQLDGGYPVIVLI
Ga0137443_12085041	3300011433	Soil	VIDRKIMNMRTQKIYFPDQQILCVFPDERSDLVQAIFELQLEGNYPVIV
Ga0137451_11532571	3300011438	Soil	MINRKIMNMRTQKIYFPDRQTLCVFPDERSDLAQAISELQLEGNYPVIVLIGGAIDEQQ
Ga0137353_10801351	3300012157	Soil	MEESKEIMRTQTISFPDRKTLCVFPDERSELAQAISELQLKDSHPVIVLIGGDIDEREAV
Ga0137355_10224651	3300012163	Soil	MRTQEISFPDRKTFCVFPDQRSELAQAISELQLKDNYPVIVLIGGDIDERE
Ga0137350_10840753	3300012166	Soil	MVIMRTQNIHFPDSQSLCVFPDERSYLEHGISELNLNDGY
Ga0137342_10557393	3300012171	Soil	MVIMRTQNIHFPDSQSLCVFPDERSYLEHGISELNLNDGYPVIVLIGGVID
Ga0137342_11309831	3300012171	Soil	MRTQTISFPDRRSLCVFPAKRSELEQRLSELNLNHGYPVIVLIGGVIDD
Ga0137321_11490711	3300012175	Soil	MEESKEIMRTQEISFPDRKTLCVFPDERSELAQAISELQLKDSHPVIV
Ga0137447_11063871	3300012226	Soil	MINRKIMNMRTQKIYFPDQQTLCVFPDERSDLVQAISELQLEGNYPVIVLIGGAIDEQQASVT
Ga0154020_111612541	3300012956	Active Sludge	VRTQTIRFPDQQALCVFPDQPSDLVRAVSELGLDKNYPVIVLI
Ga0163162_107366074	3300013306	Switchgrass Rhizosphere	MRTEKIDFPDQQALCVFPEERSDLEQAISELSLNGSYP
Ga0075311_10688121	3300014259	Natural And Restored Wetlands	MMRTQKINFPDHQTLCIFPTERSELAQATVDLGLKGHYPVIVLIGGRS
Ga0075314_11137821	3300014265	Natural And Restored Wetlands	MMRTQKINFPDHQTLCIFPTERSELAQAIVDLGLKGHYPVIVLIGGE
Ga0157380_117463921	3300014326	Switchgrass Rhizosphere	MMRTEKIYFPHQQALCVFPTERSDLGQATSEFGLTGRYPVIVLIGGEIDKQIADAT
Ga0180068_10810191	3300014864	Soil	MRTQTISFPDRRSLCVFPAKRSELEQRLSELNLKHGYPVIVLIGGVI
Ga0180076_10338943	3300014867	Soil	MMRTQKINFPDQEVVCVFPSERSELVQAISEFRLNDGYPVIVLIGGSIDEHEADATRHAIQTIAKVA
Ga0180089_10987031	3300015254	Soil	MRTQTISFPDRRSLCVFPAKRSELEQRLSELNLKHGYPVIVLIGGVIDDDQADATQRAIH
Ga0180085_12251192	3300015259	Soil	MRTQKINFPDQEVLCVFPSERSELVQAISEFQLNDGYPVIVLIGGGIDEHEADATR
Ga0132256_1027880921	3300015372	Arabidopsis Rhizosphere	MMRTQTVYFPHQQARCVFPAELSDLGQATSELHLRGRYPVIVLIGGEID
Ga0132257_1020779601	3300015373	Arabidopsis Rhizosphere	MMRTQRIDFPDQQALCVFPDARSDLEQAVSELGLKGRYPVIVLIGGEIDIPQAVLTR
Ga0184615_102078011	3300018059	Groundwater Sediment	MRTQKIYFPDRQTLCVFPGERSDLAQAISELRLEGNYPVI
Ga0184615_104140473	3300018059	Groundwater Sediment	MRTQRIYFPGHQTLCVFPNERSDLAQAASELGLKGRYPVIVLIGGAMDEQQVEVTRRAI
Ga0184636_11457073	3300018068	Groundwater Sediment	MRTQKIDFPDHQTLCVFPAERSNLAQAISELGLKGRYPVIVLIGGEIDDQQAEA
Ga0184632_101309993	3300018075	Groundwater Sediment	MRTEKLFFPHQQALIVFPDERSDLEQAISELGLKGRYPVIVLIGGEMDAQQADVTRRAIETISRTA
Ga0190269_100143409	3300018465	Soil	MRTQKIVFPNQQVLCVFPNERTDLGPAILELQLNSSYPVIVLIGGEIDERQADATRIAVQTIC
Ga0173482_106042682	3300019361	Soil	MRTEKIDFPDQQALCVFPEERSDLEQAISELSLNGSYPVIVLIGG
Ga0193739_10526171	3300020003	Soil	MRTQTINFQDHQTLCVFPTERAKLAQAVSELGLKDPYP
Ga0209108_102203981	3300025165	Soil	MRTQTINFPDQQTLCVFPAERSNLARAISDLGLKDHYAVIVLIGGKIDEQ
Ga0209108_104567884	3300025165	Soil	MRTQKIDFPDRQTLCVFPHERSNLAQAISELGLKGRYPVIVLI
Ga0209108_106238841	3300025165	Soil	MRIQKINFPGQEVLCIFPSERSDLVQAIPELRLNNSYPVIVLIGGEIDDQQADATRR
Ga0209431_109182322	3300025313	Soil	MRTQKIDFPDRQTLCVFPHERSNLAQAISELGLKGRYPVIVLIGGE
Ga0209520_104885382	3300025319	Soil	MRTQKIDFPDRQTLCVFPHERSNLAQAISELGLKGRY
Ga0207646_106681764	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGTQKIYFPERKTPCVFPSQRSELGQATSELHLRGRYPVIVLIGGEIDEQQADATRQAIQ
Ga0207709_105947041	3300025935	Miscanthus Rhizosphere	MRTEKIDFPDQQALCVFPEERSDLEQAISELSLNGSYPVIVLIGGEIEGQEADATRRAI
Ga0207670_107439141	3300025936	Switchgrass Rhizosphere	MRTEKIDFPDQQALCVFPEERSDLEQAISELSLNGSYPVIVLIGGEIEGQEADATRR
Ga0210116_10686431	3300025959	Natural And Restored Wetlands	MRTQTINFPDQPALCVFPAERANLAQAISELGLKDHYPVIVLIGGEVDEKQVDITRRA
Ga0207712_111636162	3300025961	Switchgrass Rhizosphere	MRTEKIYFPHQQALCVFPTERSDLGQATSEFGLKGRYPVIVLIGGEIDKQIADATQRA
Ga0209485_11277112	3300027691	Agricultural Soil	MRTQKINFPDRQTLGVFPDERSNLTQAISELGLRGRYPVIVLIGGKIAQHQAAVTRQAI
Ga0209285_101753863	3300027726	Freshwater Sediment	MRSQKIDFPDRQTLCVFPDKREELAQAISELKLGGNFPVIV
Ga0209575_102333281	3300027739	Freshwater	MRAKMISFPGKQILCVFPDKRSDLAQAISELKLNGNSPVIVLIGGVIDEQQAEVTRQA
Ga0209593_100185491	3300027743	Freshwater Sediment	MRTLNISFPDQQTPSVFPGELSNLAQALSELGLKGRYPVIVLIGGEIDKKQADVTHRAIQ
Ga0209706_100709241	3300027818	Freshwater Sediment	MRTQKIDFPDRQTLCVFPDDRSNLAQAISELGLKGRYPVIVLIGGEMDEQQAAVTRR
Ga0209382_100496041	3300027909	Populus Rhizosphere	MRTQKIYFPDRQTRCVFPDERSNLAQAISELGLKGRYPVIVLIGGKIDKPQAALTREA
Ga0311333_110563801	3300030114	Fen	MRTQTISFPDRRSLCVFPAERSELEQGISELNLKHGYPVIVLIGG
Ga0302323_1000928917	3300031232	Fen	MRTQKIDFPNQSAFCVFPDQRSDLEQAISELQLADNYPVIVLIGGDIDELQ
Ga0302323_1019500722	3300031232	Fen	MRTQIINFPNQQALCAFPDEHSDLGRAISELQLDENYPVIVLIGGDIDKEQ
Ga0307444_12201781	3300031360	Salt Marsh	MRTQKILFSNQQSLCIFPDDRSHLAQAISMLGLEDGYPVIVLIGGG
Ga0308179_10545032	3300031424	Soil	MRTEKLYFPHQQALCVFPDERSDLEQAISELGLKSRYPVIVLIG
Ga0311364_115786131	3300031521	Fen	MRTQTITFPDRRSLCVFPAERSELEQGISELNLKHGYPVIVLIGGVIDDDQADATRRA
Ga0307410_116380652	3300031852	Rhizosphere	MRTETIKFPDQESVGVFPEERSDLAQAIEELGLLGEHPVIVLIGGEITEKQM
Ga0214473_121677183	3300031949	Soil	MRTQNIYFPEQQTLCVFPRERWDLEEAISGLGLEDNHPVIVLIGGN
Ga0316625_1013057091	3300033418	Soil	MRTQKIDFSDRQTLCVFPDKREDLAQAISELKLGGTFPVI
Ga0316611_10264454	3300033446	Microbial Mat	MRTQVISFPNKQTLCVFPDKPSDLEQAISELKLDGNSPVIVLIGGVIDKQQAEATRQ
Ga0316611_10678102	3300033446	Microbial Mat	MRTQKIYFPDQQEVLCVFPNKRSNLEQAISELRLGGNY
Ga0316611_11589041	3300033446	Microbial Mat	MRTKKISFPGQQSLCVFPNNRSELAQAISELHLNGNSPVIVLIGGEIDEKEAEATHRA
Ga0316629_105154604	3300033483	Soil	MRTQKIDFPDRQTLCVFPGEREDLAEAISELHLGGN
Ga0316616_1021045403	3300033521	Soil	MRTQKIYFPDRQTLCVFPNERSNLAPAISELRLDSGYPVIVLIGGEIDKHQADVTRRAIQTLARI
Ga0316617_1014733042	3300033557	Soil	MRTQKISFPDRQTLCVFPEERSNLSEAISELHLVEHYPVIVLIGGGIDEDEAD
Ga0316617_1023340351	3300033557	Soil	MRTQKISITDQQSLCVFPDERSDLAQAISELKLGGTFPVIVLIG
Ga0370503_0380613_2_139	3300034196	Untreated Peat Soil	MRTQKIYFSDQQTLCVFPVERSELDQAISELQLDLGYPVIVLIGGE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079740

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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