NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079081

Metagenome / Metatranscriptome Family F079081

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079081
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 88 residues
Representative Sequence MIESFKQLEQIAKDRDLADVFLETDEQEHAVPRDQILEALRKRRAVMRDCVERGKNGGLSMGKLVGNEAKLLNEAFQNGTTFLDPLTVKAEL
Number of Associated Samples 105
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 35.34 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 88.79 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(12.931 % of family members)
Environment Ontology (ENVO) Unclassified
(37.069 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.966 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 60.83%    β-sheet: 0.00%    Coil/Unstructured: 39.17%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF01842ACT 43.97
PF03315SDH_beta 18.10
PF00072Response_reg 4.31
PF02464CinA 3.45
PF01850PIN 2.59
PF13173AAA_14 0.86
PF00144Beta-lactamase 0.86
PF13646HEAT_2 0.86
PF00990GGDEF 0.86
PF01116F_bP_aldolase 0.86
PF12281NTP_transf_8 0.86
PF03313SDH_alpha 0.86
PF00884Sulfatase 0.86
PF01544CorA 0.86
PF00092VWA 0.86
PF02900LigB 0.86
PF13692Glyco_trans_1_4 0.86
PF00781DAGK_cat 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1760L-serine deaminaseAmino acid transport and metabolism [E] 18.97
COG1546Nicotinamide mononucleotide (NMN) deamidase PncCCoenzyme transport and metabolism [H] 3.45
COG1597Phosphatidylglycerol kinase, diacylglycerol kinase familyLipid transport and metabolism [I] 1.72
COG0191Fructose/tagatose bisphosphate aldolaseCarbohydrate transport and metabolism [G] 0.86
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.86
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.86
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.86
COG2367Beta-lactamase class ADefense mechanisms [V] 0.86


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001536|A1565W1_10804412All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300002568|C688J35102_120039723All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300005171|Ga0066677_10566034All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300005175|Ga0066673_10889981All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005177|Ga0066690_10127386All Organisms → cellular organisms → Bacteria1658Open in IMG/M
3300005181|Ga0066678_10376820All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300005187|Ga0066675_10355175All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300005187|Ga0066675_11394498All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005295|Ga0065707_10990926All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005334|Ga0068869_101258365All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005340|Ga0070689_100011213All Organisms → cellular organisms → Bacteria6414Open in IMG/M
3300005340|Ga0070689_101644172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes584Open in IMG/M
3300005467|Ga0070706_101914562All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005539|Ga0068853_101271211All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005544|Ga0070686_100992688All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005556|Ga0066707_10824500All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005576|Ga0066708_10979489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300005577|Ga0068857_101383203All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300005615|Ga0070702_101647168All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300005617|Ga0068859_102137949All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005617|Ga0068859_102362205All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300005834|Ga0068851_10527411All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005841|Ga0068863_102506578All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300005842|Ga0068858_101664964All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005903|Ga0075279_10096076All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300006173|Ga0070716_101349879All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300006800|Ga0066660_10161900All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300006800|Ga0066660_11467542All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300006806|Ga0079220_10512208All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300006844|Ga0075428_100813149All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300006845|Ga0075421_100672899All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300006894|Ga0079215_10922955All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300006904|Ga0075424_101856896All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300006904|Ga0075424_102085235All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300006904|Ga0075424_102457804All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300006914|Ga0075436_100982360All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300007076|Ga0075435_100753787All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300009029|Ga0066793_10576297All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300009038|Ga0099829_11804036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300009088|Ga0099830_10101606All Organisms → cellular organisms → Bacteria2148Open in IMG/M
3300009088|Ga0099830_10593697All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium908Open in IMG/M
3300009089|Ga0099828_11705301All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300009090|Ga0099827_10185301All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1724Open in IMG/M
3300009094|Ga0111539_13138136All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300009137|Ga0066709_100432294All Organisms → cellular organisms → Bacteria1835Open in IMG/M
3300009137|Ga0066709_100888453All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300009137|Ga0066709_101281400All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1076Open in IMG/M
3300009137|Ga0066709_102671574All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300009156|Ga0111538_12104971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300009176|Ga0105242_11842610All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300010036|Ga0126305_11180369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300010045|Ga0126311_10646298All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium841Open in IMG/M
3300010320|Ga0134109_10470058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300010336|Ga0134071_10089007All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1455Open in IMG/M
3300010397|Ga0134124_10148079All Organisms → cellular organisms → Bacteria2091Open in IMG/M
3300010400|Ga0134122_10502971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1097Open in IMG/M
3300010403|Ga0134123_10291121All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1443Open in IMG/M
3300011119|Ga0105246_12192754All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300011270|Ga0137391_11000979All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300011271|Ga0137393_10015401All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5438Open in IMG/M
3300012189|Ga0137388_11269463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium675Open in IMG/M
3300012208|Ga0137376_10323046All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300012211|Ga0137377_11397033All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium628Open in IMG/M
3300012363|Ga0137390_10645816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1023Open in IMG/M
3300012532|Ga0137373_10392652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1079Open in IMG/M
3300012680|Ga0136612_10549167All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300012955|Ga0164298_10568619All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium772Open in IMG/M
3300012986|Ga0164304_10971243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300013308|Ga0157375_10003208All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium14191Open in IMG/M
3300013308|Ga0157375_12998626All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300013501|Ga0120154_1053822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium956Open in IMG/M
3300014745|Ga0157377_10466701All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300014823|Ga0120170_1113513All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300014877|Ga0180074_1003374All Organisms → cellular organisms → Bacteria2728Open in IMG/M
3300014968|Ga0157379_12678325All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300015197|Ga0167638_1060714All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium800Open in IMG/M
3300018431|Ga0066655_11183869All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300018432|Ga0190275_10001866All Organisms → cellular organisms → Bacteria15424Open in IMG/M
3300018433|Ga0066667_10427487All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1077Open in IMG/M
3300018466|Ga0190268_11827483All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300019356|Ga0173481_10807940All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300021184|Ga0196959_10117243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300021262|Ga0213904_100065All Organisms → cellular organisms → Bacteria2479Open in IMG/M
3300021272|Ga0213899_105309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300024037|Ga0233355_100385All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium935Open in IMG/M
3300024187|Ga0247672_1057125All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300024219|Ga0247665_1059232All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300024224|Ga0247673_1019352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium905Open in IMG/M
3300024245|Ga0247677_1011816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1224Open in IMG/M
3300025931|Ga0207644_11574734All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300025938|Ga0207704_10027920All Organisms → cellular organisms → Bacteria3123Open in IMG/M
3300025981|Ga0207640_10009674All Organisms → cellular organisms → Bacteria5406Open in IMG/M
3300025994|Ga0208142_1001890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1681Open in IMG/M
3300026010|Ga0207999_1025390All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300026041|Ga0207639_10065591All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2819Open in IMG/M
3300026335|Ga0209804_1292110All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300026496|Ga0257157_1040398All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium777Open in IMG/M
3300026527|Ga0209059_1196128All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300026538|Ga0209056_10711386All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300026557|Ga0179587_10856330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300027439|Ga0209332_1102288All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300027862|Ga0209701_10411941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium751Open in IMG/M
3300027882|Ga0209590_10807057All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300028755|Ga0307316_10338527All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300028884|Ga0307308_10627352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300030998|Ga0073996_11768308All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300031164|Ga0307502_10007843All Organisms → cellular organisms → Bacteria2000Open in IMG/M
3300031911|Ga0307412_11122610All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium701Open in IMG/M
3300031962|Ga0307479_11958960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300032002|Ga0307416_101772771All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300032012|Ga0310902_11324166All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300032205|Ga0307472_102469224All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300032783|Ga0335079_10084949All Organisms → cellular organisms → Bacteria3594Open in IMG/M
3300034005|Ga0334930_060138All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300034221|Ga0334937_063416All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1012Open in IMG/M
3300034268|Ga0372943_0912629All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.17%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.45%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.59%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.59%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.59%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.59%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.59%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.59%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.72%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.86%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.86%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.86%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.86%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.86%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust0.86%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005903Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014823Permafrost microbial communities from Nunavut, Canada - A3_80cm_0MEnvironmentalOpen in IMG/M
3300014877Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10DEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015197Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300021262Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Shaw_1EnvironmentalOpen in IMG/M
3300021272Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hamp_Shaw_2EnvironmentalOpen in IMG/M
3300024037Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-Q75EnvironmentalOpen in IMG/M
3300024187Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13EnvironmentalOpen in IMG/M
3300024219Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300024245Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025994Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_304 (SPAdes)EnvironmentalOpen in IMG/M
3300026010Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030998Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031164Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_SEnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300034005Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNSEnvironmentalOpen in IMG/M
3300034221Biocrust microbial communities from Mojave Desert, California, United States - 33SMCEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A1565W1_1080441233300001536PermafrostMIESFAHLEELAKDRDLAEVFLETDEQEHAVPAEDILEALRKRRAVMRDCVERGKNGGLSMGKLVGNEARLLNDAFQSGRTFLDPLTVKAELYALAVMGENS
C688J35102_12003972313300002568SoilMIESFKHLEELAAQRDLAEVFLETDEQEHGIPADQILLALRRRREVMRDCVERGKQGGVSMGKLVGNEARLLSEAFLAGRTFLDPLTVKAELYALAV
Ga0066677_1056603423300005171SoilMIESFKHLEELAAERDLADVFLETDEQEHGIPADQILMALGKRREVMRDCIERGKQGGVSMGKLVGNEAKLLSEAFRSGRTFLDPLTVKAELYALAVMGENS
Ga0066673_1088998113300005175SoilVTAARGSHNVMIESFKQLEEIAAKRDVAEVFLEADEQEHAVPREQIVEALRRRRAVMRDCVERGKSGGLSMGKLVGNEAKL
Ga0066690_1012738613300005177SoilMIESFAHLEQLAAGRDLADIFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEARLLNEAFLAGRTFLDPLTVKAE
Ga0066678_1037682013300005181SoilMIESFKQLEQIAKDRDLADVFLETDEQEHAVPRDQILEALRKRRAVMRDCVERGKNGGLSMGKLVGNEAKLLNEAFQNGTTFLDPLTVKAEL
Ga0066675_1035517513300005187SoilMIESFKHLEELAAERDLADVFLETDEQEHGIPADQILMALGKRREVMRDCIERGKQGGVSMGKLVGNEAKLLSEAFRSGRT
Ga0066675_1139449813300005187SoilMIDSFKQLDQIAKDRDLAEVFLESDEQEHGVPRDQILEALSKRRGVMRDCVARGKHGGLSMGKLVGNEAKLLAEAFEAGRTFLDPLTVKAELYALSVMG
Ga0065707_1099092613300005295Switchgrass RhizosphereMIESFKHLEQLAENRDIAEVFLEADEQEHAIPGEMILEALRKRRGVMRDCVERGKSGGESMGRLVGNEARLLNEAFQSGRTFLDP
Ga0068869_10125836513300005334Miscanthus RhizosphereMIESFSHLEQLAAGRDLADVFLETDEQEHGVPAAQILEALRKRREVMRDCVERGKNGGLSMGKLVGNEAKKLNEAFLAGRTFLDPLTIKAELYALSVMGENSRMG
Ga0070689_10001121373300005340Switchgrass RhizosphereMIESFKHLEEVGRDRDLAEVFLESDEQEHAVPREQILEALRKRRAVMRDCVERGKGGGISMGKLVGNEAKKLNEAF
Ga0070689_10164417223300005340Switchgrass RhizosphereMIESFKQLEELAGDRDLAEVFLESDEQEHAVPGEQILEALRKRRAVMRDCVDRGMSGGESMGRLVGHEAELLNRAFQEGRTFLDPLTVKAELYAL
Ga0070706_10191456213300005467Corn, Switchgrass And Miscanthus RhizosphereMIESFAQLETIAADRDLAEVFLETDEQEHGIPRDQILEALRKRREVMHDCVMRGKSGGQSMGKLVGNEAKLLNEAFQSGKTFLDPLTVKAELYALSVMGENSRM
Ga0068853_10127121123300005539Corn RhizosphereMRVLLPMIESFAHLEQLASDRDLADVFLESDAQEHAVPADQILEALTRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAG
Ga0070686_10099268823300005544Switchgrass RhizosphereMIESFAQLAELGKERDLADVFLESDEQEHGIPGADILLALRRRRQVMRDCVERGKSGGVSMGKLVGNEAKKLNEAFLAG
Ga0066707_1082450023300005556SoilMIESFKQLEQLASDRDLAEVFLETDEQEHGIPGDQILEALRKRRQVMRECVERGKGGGTSMGKLVGNEAKLLNEAFRSGKTFLDPLTIKAELYALS
Ga0066708_1097948913300005576SoilMIESFKQLEEAGANRDLADVFLEVDEQEHGLPAEQILSTLRKRREVMRDCVSRGKSGGLSMGKLVGNEAK
Ga0068857_10138320323300005577Corn RhizosphereMIESFKHLEELGRDRDLADVFLETDEQEHAVPREQILEALRKRREVMRDCVERGKRGGLSMGKLVGDEAKKLNAAFESGRTFLDPLT
Ga0070702_10164716823300005615Corn, Switchgrass And Miscanthus RhizosphereMIESFKHLEEAGADRDLAEVFLEVDEQEHGISAEQILAALRKRREVMRDCVARGKSGGLSMGKLVGN
Ga0068859_10213794913300005617Switchgrass RhizosphereMIESFKHLEEVGRDRDLAEVFLESDEQEHAVPREQILEALRKRRGVMRDCIERGKNGGQSMGKLVGDEAKKLNAAFL
Ga0068859_10236220513300005617Switchgrass RhizosphereMIESFKHLEEIARDRDLADVFLESDEQEHAVPAEMIVEALRKRRAVMRDCVERGRGSDGASMGRLVGSEARLLQQAFLEGKTFLDPLTVKAEIYALAVMGENSRMG
Ga0068851_1052741113300005834Corn RhizosphereMIESFKHLEEVGAGRDLADVFLEVDEQEHGIPGDQILAALRKRREVMRGCVARGQNGGLSMGKLVGNEAKKLNEAFAAGKTFLDPLT
Ga0068863_10250657813300005841Switchgrass RhizosphereMIESFQHLEQLAANRDLADVFLETDEQEHGIPADQILMALRKRREVMRDCIERGKNGGQSMGKLVGDEAKKLNAAFLAGKTFLDPLTVKAELYALSVM
Ga0068858_10166496423300005842Switchgrass RhizosphereMIESFKQLEELAADRDLADVFLESDEQEHGIPAADILLALKRRRAVMRDCVERGKSGGVSMGKLVGNEAKKLNEAFLA
Ga0075279_1009607623300005903Rice Paddy SoilMIESFKELEEVAAERDLVDVFLESDEQEHAIPRAQILEALRKRREVMRDCIDRGKSGGTSMGKLVGHEARQLDEAFRGGKTFLDPLTIKAELYALAVMGENSRMGVIVA
Ga0070716_10134987923300006173Corn, Switchgrass And Miscanthus RhizosphereMIESFAHLQQIALDRDLADVFLESDEREHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDA
Ga0066660_1016190043300006800SoilMIESFKQLEEIARDKDLAEVFLETDEQEHAVPGEQILEALRKRRAVMRDCVERGKSGGQSMGKLVGDEARKLNEAFQSGKTFLDPLTVKAELYALSVMGENS
Ga0066660_1146754213300006800SoilMIESFSHLEQLAAGRDLADVFLESDEQEHAVPGDTILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEARLINDAF
Ga0079220_1051220813300006806Agricultural SoilMIESFAELEKTAKERDIADVFLETDEQEHGIPREQILEALRKRRQVMRDCVDRGKSGGLSMGKLVGNEARLLNEAF
Ga0075428_10081314923300006844Populus RhizosphereMIESFKQLEEIAGDRDLAEVFLESDEQEHAVPAEQILEALKKRRAVMRDCVERGKSGGESMGRLVGHEAHLLNKAFQEGRTFLDPLTVK
Ga0075421_10067289933300006845Populus RhizosphereMIESFKHLEELSSNRDLADVFLETDEQEHAVPADQILEALRRRRAVMRDCVERGKTGGDSMGRLVGHEAQLLNEAFRSGKTFLDPLTVK
Ga0079215_1092295523300006894Agricultural SoilMIESFKQLEEAAQDRDLAEVFLEMDEQEHAVPGEQILEALRKRREVMRDCVERGKSGGESMGRLVGNEARL
Ga0075424_10185689623300006904Populus RhizosphereMIESFQQLEQLAKDRDLADVFLESDQQEHGVPAADILFALRKRRQVMRDCVERGKSGGQSMGKLVGDEARKLNEAFQSGKTFLD
Ga0075424_10208523513300006904Populus RhizosphereMIESFKHLEQIAADRDLAEVFLEADEQEHAVPREQILEALRKRRAVMRDCVERGKNGGQSMGKLVGDEAKKLNTAFLAGKTFLDPLTVKAELYALSVMGENSRM
Ga0075424_10245780413300006904Populus RhizosphereMIESFKQLEEAGANRDLAEVFLEVDEQEHGIPAEQILATLRKRREVMRDCIMRGKSGGLSMGKLVGNEAKKLNEAFAAGKTFLDPLTIKAELYALA
Ga0075436_10098236023300006914Populus RhizosphereMIETFAQLEEIAKDRDLAEVFLETDEQEHGIPRDQILEALSKRRQVMRECVDRGKSGGQSMGKLVGNEAKLLNEAYQSGKTFLDPLTVKAELYALSVMGENS
Ga0075435_10075378723300007076Populus RhizosphereMIESFKQLEEAGTNRDLAEVFLEVDEQEHGIPAEQILATLRKRREVMRDCVSRGKSGGLSMGKLVGNEAKKLNEAFTAGK
Ga0066793_1057629723300009029Prmafrost SoilMIESFAHLEKLAADRDLADVFLENDEQEHAVPAEMILEALRKRRAVMRDCVERGKNGGLSMGKLVGNEARLLNDAFQAGKTFLDPLTVKAELYALA
Ga0099829_1180403623300009038Vadose Zone SoilMIESFKSLEEVAKNRDLADVFLETDEQEHGVPGDQILEALRKRRGVMRDCVERGKGGGTSMGKLVGNEAK
Ga0099830_1010160613300009088Vadose Zone SoilMIESFKQLEEVARDRDLADVFLETDEQEHGIPPDQILEALRKRRGVMRDCVERGKGGGTSMGKLVGNEAKLLHEAFVNGRTFLDPLTVKAELYALSVMGENSRMGVIV
Ga0099830_1059369713300009088Vadose Zone SoilMIESFKQLEQVAKDRDLAEVFLEADEQEHGLPAEQILAALRKRRQVMRDCIERGKGGGQSMGKLVGNEAK
Ga0099828_1170530113300009089Vadose Zone SoilMIDSFAHLAKLGRDRDLADVFLESDEQEHAVPGDQILEALRRRRQVMRDCIERGKLGGQSMGKLVGNEARLLHEAFQSGKTFLDPLTIKAELYALSVMGENSRMG
Ga0099827_1018530133300009090Vadose Zone SoilMIESFKHLEELAATRDLADVFLESDEQEYAVPAEQILEALRKRRAVMRDCIERGKSGGLSMGKLVGNEARLLNDAFQAGKTFLDPLTVKAELYALAVMG
Ga0111539_1313813623300009094Populus RhizosphereMIESFKQLEEIAKDRDLAEVFRESDEQEHAVPAEQILEALRKRRAVMRDCVERGKGGGESMGRLVGNEARLLNDAFQNGR
Ga0066709_10043229413300009137Grasslands SoilMIESFKHLEEAGRDRDLADVFLETDAQEHGVPAADILAALRKRREVMRDCVVRGKSGGLSMGKLVGNEAKKLNEAFVSGKTFLD
Ga0066709_10088845313300009137Grasslands SoilMIESFKHLEQIAKDRDLAQVFLETDEQEHGIPREQILEALRKRRQVMRECVDRGKGGGLSMGKLVGNEAKLLNEAFVNGRTF
Ga0066709_10128140033300009137Grasslands SoilMIESFKQLEQIAKDRDLADVFFETDEQEHAVPRDQILEALRKRRAVMRDCVERGKNGGLSMGKLVGNEAKLLNEAFQN
Ga0066709_10267157413300009137Grasslands SoilMIESFQQLEEIAADRDLADVFLESDAEEHAVPAEHILEALRKRRAVMRDCVERGKSGGLSMGKLVGNEARLLNEAFQSGKTFLDPLTVKAELYALAVMGENSRMG
Ga0111538_1210497123300009156Populus RhizosphereMIESFKQLEEIAKDRDLAEVFLESDEQEHAVPAEQILEALRKRRAVMRDCVERGKGGGESMGRLVGNEARLLNDAFQNGRTF
Ga0105242_1184261013300009176Miscanthus RhizosphereMIESFKQLEELAADRDLAEVFLESDEQEHGIPAADIILALKRRRAVMRDCVERGKSGGVSMGKLVGNEAKKLNEA
Ga0126305_1118036913300010036Serpentine SoilMIESFKHLEELATDRDLAEVFLETDAEEHGVPAADILEALRKRREVMRDCIVRGKNGGASMGKLVGSEARLLNEAFLSGKTFLDPLTVKAEIYALSV
Ga0126311_1064629823300010045Serpentine SoilMIESFKHLEEVAADRDLAQVFLESDEQEHAVPADQILEALRKRRAVMRDCVERGKNGGLSMGKLVGNEARLL
Ga0134109_1047005823300010320Grasslands SoilMIETFAQLEEIAADRDLAEVFLETDEQEHGIPRDQILEALRKRRQVMRECVDRGKSGGQSMGKLVGNEAKLLNEAYRNGKTFLDPLTIK
Ga0134071_1008900713300010336Grasslands SoilMIESFKHLEQIAKDRDLAEVFLETDEQEHGIPREQILEALRKRRQVMRECIDRGKGGGLSMGKLGGNEAKLLNEAFVNGRTF
Ga0134124_1014807953300010397Terrestrial SoilMIESFKQLEELGKDRDLADVFLESDEQEHGIPAADILLALKRRRAVMRDCVERGKGGGISMGKLVGNEA
Ga0134122_1050297113300010400Terrestrial SoilMIESFKHLEEAARDRDLAEVFLESDEQEHAVPADMILEALRKRRAVMRDCVERGKGGGASMGKLVGNEARLLNDAFLSGKTFLDPLTVKAEIYALSVMGENSRMGV
Ga0134123_1029112133300010403Terrestrial SoilMIESFQHLEQLAASRDLADVFLETDEQEHGIPADQILMALRKRREVMRDCIERGKQGGVSMGKLVGNEAKLLNEAFLAGKTFLDPLTIKAELYALSVMGEN
Ga0105246_1219275423300011119Miscanthus RhizosphereMIESFAQLAELGRDRDLADVFLESDEQEHGIPAADILLALRRRRAVMRDCVERGKSGGVSMGKLVGNEAKKLNEAF
Ga0137391_1100097913300011270Vadose Zone SoilMIDSFKQLEQIAKDRDLADVFLEADAQEHGVPREQILEALTKRRAVMRDCIERGKHGGLSMGKLVGNEAKLLSEAFEAGRTFLDPLTVKAELYALSVMGENS
Ga0137393_1001540163300011271Vadose Zone SoilMIESFAHLQQIALDRDLADVFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGMSMGKLVGNEAKLLNEAFLA
Ga0137388_1126946313300012189Vadose Zone SoilVIESFAQLEELARDRDLADVFLKADEQEHGLPAEQILAALRKRRQVMRDCIERGKGGGQSMGKLVGNEAKLLNDAFLSGRTFLDPLTIKAE
Ga0137376_1032304633300012208Vadose Zone SoilMIDSFKQLEQIAKDRDLADVFLETDEQEHGVPRDQILEALTKRRGVMRDCVERGKHGGLSMGKLVGNEAKLLSEAFEAGRTFLDPLTVKAELYALSVMGENSRMGVIV
Ga0137377_1139703313300012211Vadose Zone SoilMIESFAHLERIAGDRDLADVFLESDEREHAVPTDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAGRTFLDPLTVKAEIYALS
Ga0137390_1064581623300012363Vadose Zone SoilMIDSFKQLEQIAKDRDLADVFLEADAQEHGVPREQILEALTKRRAVMRDCIERGKHGGLSMGKLVGNEAKLLSEAFEA
Ga0137373_1039265223300012532Vadose Zone SoilMIETFKELEQVAKDRDLAEVFLETDEQEHGVTREQILEALTKRRQVMRDCIDRGKSGGQSMGKLVGNEAKLLADAFQNGRTFLDPLTIKAELYALAVMGE
Ga0136612_1054916723300012680Polar Desert SandMIRSFKELEQAGADRDLAEVFLEVDVAEHGISAEDIITALTRRREVMWECIQKGMAGGLSMGKLVGNEAKLLMEAYKSGKTFLDPLTVKAE
Ga0164298_1056861913300012955SoilMIESFAQLEELAKDRDIADVFLETDAEEHGVPAADILEALRKRRGVMRDCVERGKNGGLSMGKLVGNEARLLNDAFQSGKTFLDPLTVKAELYALAVMGENS
Ga0164304_1097124323300012986SoilMIESFKHLEELAAERDLADVFLETDEQEHGIPADQILMALRRRREVMRDCVERGKHGGLSMGKLVGNEAKLLADAFANGRTFLY
Ga0157375_1000320813300013308Miscanthus RhizosphereMIESFSHLEQVAAGRDLADVFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAGRTFLDPLTVKAEI
Ga0157375_1299862613300013308Miscanthus RhizosphereMIESFAHLEQLASDRDLADVFLESDAQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAGRTFLDPLTVKAEI
Ga0120154_105382213300013501PermafrostMIESFAHLEELAKDRDLAEVFLETDEQEHAVPAADILEALRKRRAVMRDCVERGKNGGLSMGKLVGNEARLLNDGFSSG
Ga0157377_1046670113300014745Miscanthus RhizosphereMIESFKHLEELAAGRDLAEVFLETDAQEHGVPADQILETLRKRREVMRDCVGRGKGGGLSMGKLVGNE
Ga0120170_111351323300014823PermafrostMIESFAHLEELARDRDLADVFLEADEQEHAVPAEDILEALRTRRAVMRDCVERGKNGGVSMGELVGDEARLLNDAFQSGRTFLDPLTVKAELYALAVMGEN
Ga0180074_100337443300014877SoilMIESFKQLEELAANRDPADVFLETDEQEHAVPADQIVEALRRRRAVMRDCVERGRTSDGASMGRLVGSEARLLQQAFAEGRTFLDPLTVKA
Ga0157379_1267832523300014968Switchgrass RhizosphereMETKPMIESFKQLEALGKDRDLADVFLESDEQEHGIPGADILLALRRRRQVMRDCVERGKGGGVSMGKLVGNEAKKLNEAFLSGRTFLDPLTIKA
Ga0167638_106071413300015197Glacier Forefield SoilMIESFAQLEELAKDRDLADVFLETDAEEHAVPAEDILEALRMRRAVMRDCVERGKNGGLSMGKLVGNEARLLNDAFQSGKTFLDPLTVKAELY
Ga0066655_1118386913300018431Grasslands SoilMIESFAQLAELGRDRDLAEVFLESDEQEHGIPAADILLALRRRRAVMRDCVERGKSGGVSMGKLVGNEAKKLNEAFQSGRT
Ga0190275_10001866173300018432SoilMIESFKHLEELAAGRDLAEVFLQTDEQEHAVPAEQILEALRKRRAVMRDCVERGKGGGESMGRLVGNEARLLNEAFQSGKTFLDPLTVKAELYALAVMGEN
Ga0066667_1042748713300018433Grasslands SoilMIESFKQLEEAGANRDLADVFLEVDEQEHGLPAEQILSTLRKRREVMRDCVSRGKSGGLSMGKLVGNEAKKLNEAFAAGKTFLDPLTIKA
Ga0190268_1182748313300018466SoilMFRPGDTSRRPEARSQTIMIESFKHLESLAKDRDLADVFLESDEQEHAIPAEQILEALRKRRAVMRDCVERGKAGDGPSMGKLVGTEARLLDQAFREGRTFLDPLTVKAELYAL
Ga0173481_1080794013300019356SoilMIESFKHLEELAKDRDLADVFLETDAEEHGVPAADILEALGKRREVMRDCIVRGKNGGESMGKLVGSEARLLNEAFRSGKTFLDPLTVKAEIYALSVMGENSRMGVI
Ga0196959_1011724313300021184SoilMIESFKHLEEIAADRDLADVFLETDEQEHAVPAELIVEALRKRRAVMRDCVERGKASDGASMGKLVGSEARLLQQAFVE
Ga0213904_10006513300021262SoilMIESFKQLEEVGRDRDLAEVFLEVDEQEHGIPGEQILAALRKRREVMRDCIERGKSGGLSMGKLVGNEAKKLN
Ga0213899_10530913300021272SoilMIESFKHLEELAADRDLAEVFLETDEQEHAVPAEQIVEALRKRRAVMRDCVERGRSSDGASMGRLVGSEARLLQ
Ga0233355_10038513300024037SoilMIESFKHLEALAAERDLADVFLETDEQEHAVPAEMIVEALRKRRAVMRDCVERGRNSDGASMGRLVGGEARLLQQAFTEGRTFLDPLTIKAEL
Ga0247672_105712513300024187SoilMIESFAHLQQIALDRDLADVFLESDEREHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAG
Ga0247665_105923213300024219SoilMIESFAQLAELGRDRDLADVFLESDEQEHGIPAADILLALRRRRAVMRDCVERGKSGGVSMGKLVGNEAKK
Ga0247673_101935213300024224SoilMIESFAHLQQIALDRDLADVFLESDEREHAVPGDQILEALRRRRAVMRDCVERGKGGGMSMGKLVGNEAKLLNDAFLAGRTFLDPLTVKAEIY
Ga0247677_101181613300024245SoilMIESFAHLEELAGGRDLADVFLESDEQEHAVPGEDILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEGKLLNDAFLAGKTFMDP
Ga0207644_1157473413300025931Switchgrass RhizosphereMIESFKQLEEMAGSRDLADVFLETDEQEHAVPAEQIVEALRKRRAVMRDCVERGKNGGLSMGKLVGNEARLLNDAFQSG
Ga0207704_1002792013300025938Miscanthus RhizosphereMIESFKQLEEIAKDRDLADVFLESDEQEHGIPAADILLALKRRRAVMRDCVERGKSGGVSMGKLVGNEA
Ga0207640_1000967413300025981Corn RhizosphereMIESFSHLEQLAAGRDLADVFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAGRTFLDPLTVKA
Ga0208142_100189013300025994Rice Paddy SoilMIETFKDLEAMADDRDLADVFLETDEQEHGIPRDQIVEALRKRRQVMRECVDRGQHGGTSMGKLVGNEARLLADAYHSGKTFLDPLTVKAEIYALAVMG
Ga0207999_102539023300026010Rice Paddy SoilMIETFKDLEAMADDRDLADVFLETDEQEHGIPRDQIVEALRKRRQVMRECVDRGQHGGTSMGKLVGNEARLLADAYHSGKTFLDPLTVKAEIYALAVMGENSRMGVIVA
Ga0207639_1006559143300026041Corn RhizosphereMIESFAHLEQLASDRDLADVFLESDAQEHAVPADQILEALTRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAGRT
Ga0209804_129211013300026335SoilMIESFAHLEQLAAGRDLADIFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEARLLNEAFLAGRTFLDPLTVKAEIYALSVMGE
Ga0257157_104039813300026496SoilMIESFAHLQQLALDRDLADVFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAGRTFLDPLTVKAEIYALSVMGENSRMG
Ga0209059_119612813300026527SoilMIESFKHLEELAAERDLADVFLETDEQEHGIPADQILMALRRRREVMRDCVERGKQGGVSMGKLVGNEAKLLSEAFLSGRTFLDPLTVKAE
Ga0209056_1071138613300026538SoilMIESFAQLEQIGKDRDLAEVFLEVDEQEHAIPREQILEALRKRRQVMRDCIDRGKGGGLSMGKLVGNEAKLLNEAFQNGRTFLDPLTVKAELYALSVMGENSRM
Ga0179587_1085633023300026557Vadose Zone SoilMIESFKQLEELGRDRDLAEVFLETDEQEHAVPADQIVAALTRRREVMRDCIERGRSNGGMSMGKLVGNEASKLASAFAEGRTFLDPLTIKAEL
Ga0209332_110228823300027439Forest SoilMIESFAHLEQIALDRDLADVFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNE
Ga0209701_1041194113300027862Vadose Zone SoilMIESFAHLEQLAAERDLADVFLETDEQEHAIPGQQILEALRKRRAVMHDCIDRGKGGGLSMGKLVGNEAKKLNEAFQAGKTFLDPLTVK
Ga0209590_1080705713300027882Vadose Zone SoilMIESFKHLEELAATRDLADVFLESDEQEYAVPAEQILEALRKRRAVMRDCIERGKSGGLSMGKLVGNEARLLNDAFQAGKTFLDPL
Ga0307316_1033852723300028755SoilMIESFKHLEELAKDRDLADVFLETDAEEHGVPAADILEALGKRREVMRDCIVRGKNGGESMGKLVGSEARLLNEAFRSGKTFLDPLTVKAEIYALSVMGENSRMGVIV
Ga0307308_1062735213300028884SoilVIESFAQLEELARDRDLADVFLETDEQEHGLPAEQILAALRKRRQVMRDCIERGKSGGQSMGKLVGNEAKLLNEAFLSGRTFL
Ga0073996_1176830813300030998SoilMIESFKQLEQIAKDRDLADVFLESDEQEHGVPRDQILEALTKRRGVMRDCIERGKNGGLSMGKLVGNEAKLLSE
Ga0307502_1000784313300031164SoilMIESFKHLEATAGDRDLAEVFLQADEQEHAVPAEQIVEALSRRRAVMRDCVERGRSSDGQSMGKLVGSEARLLQQAFTEGRTFLDPLTVKAELYA
Ga0307412_1112261023300031911RhizosphereMIESFKHLEELAKDRDLADVFLETDAEEHGVPAEDILEALRKRRAVMRDCIVRGKNGGQSMGKLVGSEARLLNEAFLKGKTFLDPLTV
Ga0307479_1195896013300031962Hardwood Forest SoilMIESFKQLEEVGRDRDLADVFLEVDEQEHGTPGEQILTALRKRREVMRDCIERGKNGGISMGKLVGNEAKKLNEAFAAGKTFLDPLTIK
Ga0307416_10177277123300032002RhizosphereMIESFAQLEQLGAGRDLADVFLETDEQEHAVPAADILEALRKRRGVMRDCVERGKSGGTSMGKLVGHEARLL
Ga0310902_1132416613300032012SoilMIESFKHLEELAKDRDLADVFLETDEQEHAIPADQILEALRRRRAVMRDCVERGKSGDGPSMGKLVGKEARLL
Ga0307472_10246922423300032205Hardwood Forest SoilMIESFKHLEELAAERDLADVFLETDEQEHGIPADQILMALRKRREVMRDCVERGKQGGVSMGKLVGNEAKLLADAFYNGRTFLDPLTVKAELYALAVMGENSRMGVIV
Ga0335079_1008494953300032783SoilMIESFKQLEEIAKERDVADVFLETDEQEHGIPREQIVEALRKRRQVMRDCVDRGKNGGTSMGKLVGNEAKLLNEAYESGRTFLDPL
Ga0334930_060138_1_2313300034005Sub-Biocrust SoilMIESFKHLEELAANRDLAEVFLETDEQEHAVPAEQILEALRKRRAVMRDCVERGKSSDGASMGRLVGSEARLLQQAF
Ga0334937_063416_3_2843300034221BiocrustMMIESFKHLEEVATDRDLADVFLQSDEQEHAIPAEQILEALRKRRAVMRDCVERGKSGSGQSMGKLVGHEARLLEQAFREGRTFLDPLTVKAEL
Ga0372943_0912629_281_5833300034268SoilMIESFAHLEQLAAGRDLADVFLESDEQEHAVPGDQILEALRRRRAVMRDCVERGKGGGTSMGKLVGNEAKLLNDAFLAGRTFLDPLTVKAEIYALSVMGEN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.