Metagenome Family F076557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076557
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	65 residues
Representative Sequence	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR
Number of Associated Samples	90
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	38.14 %
% of genes from short scaffolds (< 2000 bps)	87.29 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.034 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (15.254 % of family members)
Environment Ontology (ENVO)	Unclassified (46.610 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.475 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.91% β-sheet: 22.83% Coil/Unstructured: 53.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
e.8.1.1: DNA polymerase I	d1x9ma2	1x9m	0.72279
e.8.1.1: DNA polymerase I	d4dqqa2	4dqq	0.71541
d.58.29.1: Adenylyl and guanylyl cyclase catalytic domain	d1ab8a_	1ab8	0.7071
d.58.48.0: automated matches	d2epia_	2epi	0.70349
d.58.50.1: Hypothetical protein TT1725	d1j27a_	1j27	0.69926

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00793	DAHP_synth_1	21.19
PF00005	ABC_tran	20.34
PF01139	RtcB	17.80
PF04828	GFA	3.39
PF06508	QueC	2.54
PF00196	GerE	1.69
PF01042	Ribonuc_L-PSP	1.69
PF07730	HisKA_3	1.69
PF03466	LysR_substrate	1.69
PF00141	peroxidase	0.85
PF12833	HTH_18	0.85
PF01812	5-FTHF_cyc-lig	0.85
PF03993	DUF349	0.85
PF13406	SLT_2	0.85
PF00355	Rieske	0.85
PF00211	Guanylate_cyc	0.85
PF04286	DUF445	0.85
PF02469	Fasciclin	0.85
PF00106	adh_short	0.85
PF03401	TctC	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	17.80
COG3791	Uncharacterized conserved protein	Function unknown [S]	3.39
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	2.54
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	2.54
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	2.54
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	2.54
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	2.54
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	2.54
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	2.54
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	2.54
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	2.54
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.69
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.69
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.69
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.69
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.69
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.85
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	0.85
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.85
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.85
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.03 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.03 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.03 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.56 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	58.47 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	42.37 %
Unclassified	root	N/A	27.97 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	9.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	11.86 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.32 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.69 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.32 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1.69 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.85 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.85 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.85 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.32 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	1.69 %
Collimonas fungivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas fungivorans	0.85 %
Rubrivivax benzoatilyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → Rubrivivax benzoatilyticus	0.85 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.85 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.32 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	1.69 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	0.85 %
Methylibium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp.	0.85 %
Collimonas fungivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas fungivorans	0.85 %
Rubrivivax benzoatilyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → Rubrivivax benzoatilyticus	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.32 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	1.69 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	0.85 %
Methylibium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp.	0.85 %
Collimonas fungivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas fungivorans	0.85 %
Rubrivivax benzoatilyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → Rubrivivax benzoatilyticus	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_4688156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	894	Open in IMG/M
3300002128\|JGI24036J26619_10059631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	750	Open in IMG/M
3300003369\|JGI24140J50213_10030568	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300003369\|JGI24140J50213_10214849	Not Available	597	Open in IMG/M
3300004091\|Ga0062387_101757817	Not Available	505	Open in IMG/M
3300004114\|Ga0062593_102734148	Not Available	562	Open in IMG/M
3300004156\|Ga0062589_100144881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1617	Open in IMG/M
3300004156\|Ga0062589_101782849	Not Available	617	Open in IMG/M
3300004157\|Ga0062590_100862016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	842	Open in IMG/M
3300004643\|Ga0062591_102772839	Not Available	519	Open in IMG/M
3300005093\|Ga0062594_101129055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	769	Open in IMG/M
3300005328\|Ga0070676_10129463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300005331\|Ga0070670_100586485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	997	Open in IMG/M
3300005331\|Ga0070670_101959633	Not Available	539	Open in IMG/M
3300005333\|Ga0070677_10644925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	591	Open in IMG/M
3300005333\|Ga0070677_10845199	Not Available	525	Open in IMG/M
3300005343\|Ga0070687_100067939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1904	Open in IMG/M
3300005353\|Ga0070669_100720092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	844	Open in IMG/M
3300005354\|Ga0070675_101916137	Not Available	547	Open in IMG/M
3300005355\|Ga0070671_100291319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1389	Open in IMG/M
3300005364\|Ga0070673_100004856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → Rubrivivax benzoatilyticus	8559	Open in IMG/M
3300005364\|Ga0070673_100539405	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300005365\|Ga0070688_100109186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp.	1837	Open in IMG/M
3300005441\|Ga0070700_101618230	Not Available	554	Open in IMG/M
3300005457\|Ga0070662_100445135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1075	Open in IMG/M
3300005457\|Ga0070662_100724157	Not Available	843	Open in IMG/M
3300005526\|Ga0073909_10048107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1537	Open in IMG/M
3300005564\|Ga0070664_100521611	Not Available	1097	Open in IMG/M
3300005578\|Ga0068854_101454958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	621	Open in IMG/M
3300005615\|Ga0070702_100902500	Not Available	692	Open in IMG/M
3300005718\|Ga0068866_10227711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	1129	Open in IMG/M
3300006163\|Ga0070715_10216162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	983	Open in IMG/M
3300006881\|Ga0068865_100259741	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M
3300009094\|Ga0111539_11596767	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009156\|Ga0111538_12126732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	705	Open in IMG/M
3300009176\|Ga0105242_11290786	Not Available	753	Open in IMG/M
3300009609\|Ga0105347_1381530	Not Available	604	Open in IMG/M
3300009686\|Ga0123338_10003984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13089	Open in IMG/M
3300009686\|Ga0123338_10004687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	11874	Open in IMG/M
3300009695\|Ga0123337_10277121	Not Available	853	Open in IMG/M
3300009774\|Ga0123339_10502676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	508	Open in IMG/M
3300010331\|Ga0123336_10562627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	563	Open in IMG/M
3300010396\|Ga0134126_10117933	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300010400\|Ga0134122_10461897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1139	Open in IMG/M
3300010400\|Ga0134122_11145788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	774	Open in IMG/M
3300011435\|Ga0137426_1014488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1856	Open in IMG/M
3300012668\|Ga0157216_10012985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4483	Open in IMG/M
3300012909\|Ga0157290_10153887	Not Available	740	Open in IMG/M
3300012955\|Ga0164298_11386368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	543	Open in IMG/M
3300013306\|Ga0163162_13401254	Not Available	508	Open in IMG/M
3300013308\|Ga0157375_11912871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	704	Open in IMG/M
3300014325\|Ga0163163_13095317	Not Available	519	Open in IMG/M
3300014326\|Ga0157380_11511910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	725	Open in IMG/M
3300014326\|Ga0157380_13044798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	534	Open in IMG/M
3300015163\|Ga0167665_1080553	Not Available	563	Open in IMG/M
3300015189\|Ga0167667_1049396	Not Available	1003	Open in IMG/M
3300015200\|Ga0173480_10290957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	908	Open in IMG/M
3300015201\|Ga0173478_10580147	Not Available	578	Open in IMG/M
3300015204\|Ga0167626_1099925	Not Available	723	Open in IMG/M
3300015371\|Ga0132258_13130103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1143	Open in IMG/M
3300015371\|Ga0132258_13318467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1107	Open in IMG/M
3300017792\|Ga0163161_11241898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	646	Open in IMG/M
3300018429\|Ga0190272_10228903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	1373	Open in IMG/M
3300018466\|Ga0190268_10938095	Not Available	679	Open in IMG/M
3300018469\|Ga0190270_10977932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	871	Open in IMG/M
3300018476\|Ga0190274_10108979	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300018476\|Ga0190274_10934680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	937	Open in IMG/M
3300018476\|Ga0190274_11040936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	895	Open in IMG/M
3300018481\|Ga0190271_10021105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5025	Open in IMG/M
3300018481\|Ga0190271_10948515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	985	Open in IMG/M
3300018481\|Ga0190271_11974117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	693	Open in IMG/M
3300019356\|Ga0173481_10251770	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300020027\|Ga0193752_1010917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4789	Open in IMG/M
3300021403\|Ga0210397_10131881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1727	Open in IMG/M
3300021403\|Ga0210397_10629263	Not Available	822	Open in IMG/M
3300022561\|Ga0212090_10001772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	43754	Open in IMG/M
3300022561\|Ga0212090_10009249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	14572	Open in IMG/M
3300022561\|Ga0212090_10017018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9495	Open in IMG/M
3300022561\|Ga0212090_10024082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7443	Open in IMG/M
3300022897\|Ga0247764_1189683	Not Available	625	Open in IMG/M
3300025140\|Ga0209724_1239640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	550	Open in IMG/M
3300025650\|Ga0209385_1056914	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300025834\|Ga0209100_1149004	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300025893\|Ga0207682_10140350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1084	Open in IMG/M
3300025899\|Ga0207642_10256338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	995	Open in IMG/M
3300025905\|Ga0207685_10172010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	997	Open in IMG/M
3300025907\|Ga0207645_10563157	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300025923\|Ga0207681_10354501	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300025923\|Ga0207681_10470859	Not Available	1025	Open in IMG/M
3300025923\|Ga0207681_10958008	Not Available	717	Open in IMG/M
3300025925\|Ga0207650_10478077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1039	Open in IMG/M
3300025925\|Ga0207650_10549870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	968	Open in IMG/M
3300025925\|Ga0207650_11111895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	673	Open in IMG/M
3300025931\|Ga0207644_10046615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3089	Open in IMG/M
3300025931\|Ga0207644_10326077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1242	Open in IMG/M
3300025931\|Ga0207644_10430621	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300025937\|Ga0207669_10438893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1032	Open in IMG/M
3300025940\|Ga0207691_10566842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	962	Open in IMG/M
3300025945\|Ga0207679_11561163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	605	Open in IMG/M
3300025972\|Ga0207668_10852769	Not Available	809	Open in IMG/M
3300025972\|Ga0207668_12076931	Not Available	512	Open in IMG/M
3300025986\|Ga0207658_11255890	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300026067\|Ga0207678_10334559	Not Available	1304	Open in IMG/M
3300026067\|Ga0207678_11066036	Not Available	715	Open in IMG/M
3300026116\|Ga0207674_11742236	Not Available	591	Open in IMG/M
3300026118\|Ga0207675_100670580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1044	Open in IMG/M
3300026118\|Ga0207675_102080334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	584	Open in IMG/M
3300026121\|Ga0207683_10068492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3133	Open in IMG/M
3300026121\|Ga0207683_10565049	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300028889\|Ga0247827_10627812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	691	Open in IMG/M
3300029894\|Ga0247028_1007034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4980	Open in IMG/M
3300029901\|Ga0247051_1068620	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300031538\|Ga0310888_10419104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	789	Open in IMG/M
3300031716\|Ga0310813_11088928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	732	Open in IMG/M
3300031854\|Ga0310904_10918110	Not Available	619	Open in IMG/M
3300031939\|Ga0308174_10274777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1318	Open in IMG/M
3300031996\|Ga0308176_12415265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas fungivorans	561	Open in IMG/M
3300032074\|Ga0308173_10863673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	835	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.08%
Host-Associated	Host-Associated	44.92%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	44.92%
Terrestrial	Environmental → Terrestrial	41.53%
Aquatic	Environmental → Aquatic	13.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.20%
Freshwater	Environmental → Aquatic → Freshwater	11.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.86%
Sediment	Environmental → Aquatic → Sediment	1.69%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	27.12%
Ice	Environmental → Aquatic → Freshwater → Ice	11.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.63%
Loam	Environmental → Terrestrial → Soil → Loam	5.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	27.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.49%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	9.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.08%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	15.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.56%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	9.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.54%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.54%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.54%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	1.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Glacier Forefield Soil	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009686	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG	Environmental	Open in IMG/M
3300009695	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - frozenSSSS metaG	Environmental	Open in IMG/M
3300009774	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - lysozymeSSSS metaG	Environmental	Open in IMG/M
3300010331	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015163	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1b, glacier snout)	Environmental	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015204	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2B, Ice surface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300025140	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025834	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - lysozymeSSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300029894	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-A1b	Environmental	Open in IMG/M
3300029901	Cryconite microbial communities from ice sheet in Kangerlussuaq, Greenland - KAN_P-B3a	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0297.00008090	2162886012	Miscanthus Rhizosphere	MTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG
JGI24036J26619_100596312	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSILRFNGQTQQARAXLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR*
JGI24140J50213_100305682	3300003369	Arctic Peat Soil	MTTSILRFDGPSHQSRIQLVPLLKEFPQVSFHERAPSEYEVTAADDASLRALAGKPGWSLTGTR*
JGI24140J50213_102148492	3300003369	Arctic Peat Soil	MTTSILRFDGPAQQSRIQLVGLLREFPQVLFHERAPSEYEVTAADEASLHALAGKPGWSLTAAH*
Ga0062387_1017578172	3300004091	Bog Forest Soil	LDMTTSILRFDGPSQQSRIQLVPLLREFPQVQFHERAPSEYEVTASDEASLRALAGKPGWSLSGTR*
Ga0062593_1027341481	3300004114	Soil	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTADDKAVLQALGSKPGWSLAAGR*
Ga0062589_1001448812	3300004156	Soil	MTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG*
Ga0062589_1017828491	3300004156	Soil	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDQTVLQVLGSKPGWSLAGGH*
Ga0062590_1008620162	3300004157	Soil	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQVLGSKPGWSLAGGH*
Ga0062591_1027728392	3300004643	Soil	RCRRPVVPPMTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR*
Ga0062594_1011290552	3300005093	Soil	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR*
Ga0070676_101294632	3300005328	Miscanthus Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDTSVLQKLAAKPGWSLAAPR*
Ga0070670_1005864852	3300005331	Switchgrass Rhizosphere	SMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKTVLQALGSKPGWSLAGGH*
Ga0070670_1019596332	3300005331	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQKLASKPGWSLAAPH*
Ga0070677_106449251	3300005333	Miscanthus Rhizosphere	QQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG*
Ga0070677_108451991	3300005333	Miscanthus Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKTVLQALGSKPGWSLAGGH*
Ga0070687_1000679393	3300005343	Switchgrass Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTAEDKAVLQALGSKPGWSLAAGR*
Ga0070669_1007200921	3300005353	Switchgrass Rhizosphere	GIPSTTPSGASLVRHTDPADDPPVALSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQVLGSKPGWSLAGGH*
Ga0070675_1019161372	3300005354	Miscanthus Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDIAVLQKLASKPGWSLASPH*
Ga0070671_1002913192	3300005355	Switchgrass Rhizosphere	MTTSTLRFNGPTQQARAQLVQLLREFPNVSFRERAATEYEVTAPDGSTLEALAKKPGWSLAGGH*
Ga0070673_1000048561	3300005364	Switchgrass Rhizosphere	MTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGR*
Ga0070673_1005394052	3300005364	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQITFRERTLAEYEVTAEDTAVLQKLASKPGWSLASPH*
Ga0070688_1001091861	3300005365	Switchgrass Rhizosphere	LRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG*
Ga0070700_1016182301	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQKLASKPGWSL
Ga0070662_1004451351	3300005457	Corn Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQKLASKPGWSLASPH*
Ga0070662_1007241571	3300005457	Corn Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTSVLQKLAAKPGWSLAAPR*
Ga0073909_100481072	3300005526	Surface Soil	MTTSILRFNGQTQQARAQLVPLLREFPQVTSRERTLAEYEVTADDKAVLQALGRKPGWSLAAGR*
Ga0070664_1005216112	3300005564	Corn Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDTSVLQKLATKPGWSLAAPR*
Ga0068854_1014549582	3300005578	Corn Rhizosphere	AAFSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDTSVLQKLAAKPGWSLAAPR*
Ga0070702_1009025002	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTADDKAVLQALGSKPGWSLAAGRQG*
Ga0068866_102277111	3300005718	Miscanthus Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGRQG*
Ga0070715_102161622	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ILRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTAEDKAVLQALGSKPGWSLAAGR
Ga0068865_1002597412	3300006881	Miscanthus Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTSVLQKLAAKPGWSLAAPR*
Ga0111539_115967672	3300009094	Populus Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREIPQVTFRERTLAEYEVTAEDKIVLQALGTKPGWSLAGGH*
Ga0111538_121267321	3300009156	Populus Rhizosphere	PDTVALSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKTVLQALGTKPGWSLAGGH*
Ga0105242_112907861	3300009176	Miscanthus Rhizosphere	MTTSILRFNGQSQQARAQLVPLLREFPQVTFRERALAEYEVTADDKAVLQALGSKP
Ga0105347_13815302	3300009609	Soil	LVRHTDPADDPPVAFSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQKLASKPGWSLASPH*
Ga0123338_100039847	3300009686	Glacier Valley	MTTSILRFVGPSHQSRIQLVRLLQEFPQVQFHERAPTEFQVTAPDEASLRALAGQPGWSLTGSH*
Ga0123338_1000468710	3300009686	Glacier Valley	MTTSILRFDGPSHQGRIQLVPLLREFPNVSFQERAPAEYEVTAADETSLRALAVKPGWSLIGAH*
Ga0123337_102771211	3300009695	Glacier Valley	MTTSLLRFDGPSQQSRIQLVPLLKEFPQVSFQERAASEYEVTAADEAALRALARKPGWSLIKTR*
Ga0123339_105026761	3300009774	Glacier Valley	MTTSLLRFDGPSQQSRIQLVRLLKEFPQVSFQERAASEYEVTAADEAALRAL
Ga0123336_105626272	3300010331	Glacier Valley	MTTSLLRFDGPSQQSRIQLVRLLKEFPQVSFQERAASEYEVTAADEAALRALAVKPGWSLIRNQ*
Ga0134126_101179334	3300010396	Terrestrial Soil	MTTSILRFDGPSQQSRIQLVPLLKEFPHVLFHECAPSQYEVTAADEASLRALASKPGWSLTGSH*
Ga0134122_104618972	3300010400	Terrestrial Soil	MTTSILRYNGLTQQARAQLGPLLREFPQVTFRERTLAEYEVTAEDIAVLQKLASKPGWSLASPH*
Ga0134122_111457881	3300010400	Terrestrial Soil	MTTSILRYNGLTQQARAQLVPLLREFPQITFRERTLAEYEVTAEDTVLQKLASKPGWSLASPR*
Ga0137426_10144884	3300011435	Soil	MTTSILRFNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDQTVLQALASKPGWSLATGR*
Ga0157216_100129855	3300012668	Glacier Forefield Soil	LQRACPSTESAHLIALDMTTSLLRFDGPSQQSRIQLVRLLKEFPQVSFQERAASEYEVTAADEAALRALAVKPGWSLIRNQ*
Ga0157290_101538871	3300012909	Soil	IRTRRRPDTVALSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDQTVLQVLGSKPGWSLAGGH*
Ga0164298_113863681	3300012955	Soil	NGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGR*
Ga0163162_134012541	3300013306	Switchgrass Rhizosphere	TSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR*
Ga0157375_119128711	3300013308	Miscanthus Rhizosphere	LRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTADDKAVLQALGSKPGWSLAAGR*
Ga0163163_130953171	3300014325	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLRKLASKPGWSLAAPR*
Ga0157380_115119101	3300014326	Switchgrass Rhizosphere	SILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQVLGSKPGWSLAGGH*
Ga0157380_130447982	3300014326	Switchgrass Rhizosphere	SILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGKKPGWSLAGGH*
Ga0167665_10805531	3300015163	Glacier Forefield Soil	MTTSILRFDGPSHQSRIQLVRLLQEFPQVQFHERAPTEFQVTAPDEASLRALAGKPGWSLTGTH*
Ga0167667_10493961	3300015189	Glacier Forefield Soil	MTTSILRFVGPSHQSRVQLVRLLQEFPQVQFHERAPTEFQVTAPDEASLRALAGQPGWSLTGSH*
Ga0173480_102909571	3300015200	Soil	MNTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQVLGSKPGWSLAGGH*
Ga0173478_105801471	3300015201	Soil	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG*
Ga0167626_10999252	3300015204	Glacier Forefield Soil	LQRACPSTESAHLIALDMTTSLLRFDGPSQQSRIQLVRLLKEFPQVLFQERAASEYEVTAADEAALRALAIKPGWSLIRNQ*
Ga0132258_131301032	3300015371	Arabidopsis Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQELASKPGWSLASPR*
Ga0132258_133184672	3300015371	Arabidopsis Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGRKPGWSLAAGR*
Ga0163161_112418982	3300017792	Switchgrass Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR
Ga0190272_102289031	3300018429	Soil	LGRHTHPNPTPRPVVSPMTTSILRFNGLTQQARAQLVPLLREFPQVTFRERTLSEYEVTADDKAVLQALASKPGWSLASSGR
Ga0190268_109380952	3300018466	Soil	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGRKPGWSLAGGH
Ga0190270_109779322	3300018469	Soil	VALSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQALGSKPGWSLAGGH
Ga0190274_101089793	3300018476	Soil	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDQTVLQVLGSKPGWSLAGGH
Ga0190274_109346802	3300018476	Soil	MTTSILRFNGQTQQARAHLVPLLLEFPQVTFRERTLAEYEVTAEDKAILQALGRKPGWSLAAGR
Ga0190274_110409362	3300018476	Soil	MITSILRFNGLTQQARAQLVPLLREFPQVTFRERALAEYEVTADDNTVLQALASKPGWSLASGH
Ga0190271_100211054	3300018481	Soil	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKSVLQALARKPGWSLASGR
Ga0190271_109485152	3300018481	Soil	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAILQALGSKPGWSLAAGR
Ga0190271_119741172	3300018481	Soil	QRPLQAHRWSAMRTRRRPDTVALSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQALGSKPGWSLAGGH
Ga0173481_102517701	3300019356	Soil	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQVLGSKPGWSLAGGH
Ga0193752_101091710	3300020027	Soil	MTTSILRFNGLTQQARAQLVPLLREFPQVHFRERTALEYEVTADDRSALQALASKPGWSLAGGRP
Ga0210397_101318811	3300021403	Soil	MTTSFLRFDGPSQQSRIQIVSLLKEFPQVLFREHAPSEYEVTAADEAALRALARKPGWSLTGTH
Ga0210397_106292631	3300021403	Soil	MTTSILRFDGPSQQSRIQLVPLLREFPQVQFHERAPSEYEVTASDEASLRALAGKPGWSLTVAR
Ga0212090_1000177241	3300022561	Glacier Valley	MTTSLLRFDGPSQQSRIQLVRLLKEFPQVSFQERAASEYEVTAADEAALRALAVKPGWSLIRNQ
Ga0212090_100092499	3300022561	Glacier Valley	MTTSILRFVGPSHQSRIQLVRLLQEFPQVQFHERAPTEFQVTAPDEASLRALAGQPGWSLTGSH
Ga0212090_100170182	3300022561	Glacier Valley	MTTSILRFDGPSHQGRIQLVPLLREFPNVSFQERAPAEYEVTAADETSLRALAVKPGWSLIGAH
Ga0212090_100240823	3300022561	Glacier Valley	MTTSLLRFDGPSQQSRIQLVPLLKEFPQVSFQERAASEYEVTAADEAALRALARKPGWSLIKTR
Ga0247764_11896832	3300022897	Plant Litter	MITSILRFNGLTQQARAQLVPLLREFPQVSFRERTAAEYEVSAEDRAALQALAVKPGWSLASVR
Ga0209724_12396401	3300025140	Glacier Valley	MTTSLLRFDGPSQQSRIQLVPLLKEFPQVSFQERAASEYEVTAAD
Ga0209385_10569144	3300025650	Arctic Peat Soil	MTTSILRFDGPSHQSRIQLVPLLKEFPQVSFHERAPSEYEVTAADDASLRALAGKPGWSLTGTR
Ga0209100_11490041	3300025834	Glacier Valley	ALDMTTSLLRFDGPSQQSRIQLVRLLKEFPQVSFQERAASEYEVTAADEAALRALAVKPGWSLIRNQ
Ga0207682_101403502	3300025893	Miscanthus Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTSVLQKLAAKPGWSLAAPR
Ga0207642_102563381	3300025899	Miscanthus Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG
Ga0207685_101720102	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ASSMTTSILRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTAEDKAVLQALGSKPGWSLAAGR
Ga0207645_105631571	3300025907	Miscanthus Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKTVLQALGTKPGWSL
Ga0207681_103545013	3300025923	Switchgrass Rhizosphere	ILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQVLGSKPGWSLAGGH
Ga0207681_104708591	3300025923	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQELASKPG
Ga0207681_109580081	3300025923	Switchgrass Rhizosphere	MTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKSGWS
Ga0207650_104780771	3300025925	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKTVLQALGSKPGWSLAGGH
Ga0207650_105498701	3300025925	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQKLASKPGWSLAAPR
Ga0207650_111118951	3300025925	Switchgrass Rhizosphere	PPMTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG
Ga0207644_100466154	3300025931	Switchgrass Rhizosphere	CRRPVVPPMTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG
Ga0207644_103260772	3300025931	Switchgrass Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTADDKAVLQALGSKPGWSLAAGR
Ga0207644_104306212	3300025931	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDTSVLQKLAAKPGWSLAAPR
Ga0207669_104388932	3300025937	Miscanthus Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERALAEYEVTAEDKAVLQALGSKPGWSLAGGR
Ga0207691_105668421	3300025940	Miscanthus Rhizosphere	RSRCRRPVVPPMTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG
Ga0207679_115611632	3300025945	Corn Rhizosphere	TSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKTVLQALGSKPGWSLAGGH
Ga0207668_108527692	3300025972	Switchgrass Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKTVLQVLGSKPGWILAGGH
Ga0207668_120769311	3300025972	Switchgrass Rhizosphere	QQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQKLASKPGWSLASPH
Ga0207658_112558901	3300025986	Switchgrass Rhizosphere	FSMTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTSVLQKLAAKPGWSLAAPR
Ga0207678_103345591	3300026067	Corn Rhizosphere	MTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDTSVLQKLAAKPGWSLAAPR
Ga0207678_110660362	3300026067	Corn Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQITFRERTLAEYEVTAEDTAVLQKLASKPGWSLASPH
Ga0207674_117422361	3300026116	Corn Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQKLASKPGWSLAAPH
Ga0207675_1006705801	3300026118	Switchgrass Rhizosphere	AHIRSRCRRLSLVAPPMTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR
Ga0207675_1020803342	3300026118	Switchgrass Rhizosphere	ILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDQTVLQVLGSKPGWSLAGGH
Ga0207683_100684921	3300026121	Miscanthus Rhizosphere	TSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGRQG
Ga0207683_105650493	3300026121	Miscanthus Rhizosphere	MTTSILRYNGLTQQARAQLVPLLREFPQITFRERTLAEYEVTAEDIAVLQKLASKPGWSLASPH
Ga0247827_106278122	3300028889	Soil	RRPSPVAPPMTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR
Ga0247028_10070344	3300029894	Cryconite	MTTSILRFDGPSHQSRIQLVRLLQEFPQVQFHERAPTEFQVTAPDEASLRALAGKPGWSLTGTH
Ga0247051_10686201	3300029901	Cryconite	MTTSLLRFDGPSQQSRIQLVRLLKEFPQVLFQERAASEYEVTAADEAALRALAIKPGWSLIRNQ
Ga0310888_104191042	3300031538	Soil	SPVAPPMTTSILRFNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDKAVLQALGSKPGWSLAAGR
Ga0310813_110889282	3300031716	Soil	SRCRRPVVPPMTTSILRFNGQSQQARAQLVPLLREFPQVTFRERTLAEYEVTADDKAVLQALGSKPGWSLAAGRQG
Ga0310904_109181101	3300031854	Soil	MTTSILRYNGLTQQARAQLVPLLREFPQVTFRERTLAEYEVTAEDTAVLQELASKPGWSLASPH
Ga0308174_102747772	3300031939	Soil	MTTSILRYNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAADQAVLQALARKPGWSLAGER
Ga0308176_124152651	3300031996	Soil	QTQQARAQLVPLLREFPQVTFRERTLAEYEVTADDTSVLQKLATKPGWSLGAPR
Ga0308173_108636732	3300032074	Soil	MTTSILRYNGQTQQARAQLVPLLREFPQVTFRERTLAEYEVTAADQAVLQALARIPGWSLAGER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences