NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075096

Metagenome / Metatranscriptome Family F075096

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075096
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 52 residues
Representative Sequence MPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIM
Number of Associated Samples 92
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 9.24 %
% of genes near scaffold ends (potentially truncated) 99.16 %
% of genes from short scaffolds (< 2000 bps) 98.32 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.916 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(34.454 % of family members)
Environment Ontology (ENVO) Unclassified
(33.613 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(82.353 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.50%    β-sheet: 0.00%    Coil/Unstructured: 47.50%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00011HSP20 95.80
PF02627CMD 1.68
PF13419HAD_2 0.84
PF01041DegT_DnrJ_EryC1 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 95.80
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 1.68
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 1.68
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.84
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.84
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.84
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.84
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.84
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.84

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.92 %
UnclassifiedrootN/A10.08 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004119|Ga0058887_1505416All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300004120|Ga0058901_1007863All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300004121|Ga0058882_1021609All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300004152|Ga0062386_100014638All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5637Open in IMG/M
3300004472|Ga0068974_1352619All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300004474|Ga0068968_1448670All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300004614|Ga0068956_1378807All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300004617|Ga0068955_1244643All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300004631|Ga0058899_10152009Not Available665Open in IMG/M
3300005332|Ga0066388_108320911Not Available517Open in IMG/M
3300005538|Ga0070731_10573679All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300005610|Ga0070763_10178618All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300006176|Ga0070765_101952058Not Available549Open in IMG/M
3300009038|Ga0099829_10356401All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300009698|Ga0116216_10657232All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300009824|Ga0116219_10814219All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300010366|Ga0126379_10733046All Organisms → cellular organisms → Bacteria → Proteobacteria1084Open in IMG/M
3300010866|Ga0126344_1132981All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300011050|Ga0138571_156173All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300011086|Ga0138564_1118787All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300011089|Ga0138573_1096993All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300011090|Ga0138579_1121309All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300011110|Ga0138578_1080728All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300011120|Ga0150983_13223155All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300017821|Ga0187812_1219651All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300017823|Ga0187818_10348830All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300017970|Ga0187783_11390200All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300019158|Ga0184580_124103All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300019166|Ga0184595_111469All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300019166|Ga0184595_122103All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300019166|Ga0184595_123870All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300019178|Ga0184583_121004All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300019186|Ga0184588_130595All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300019187|Ga0184584_115524All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300019188|Ga0184599_118296All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300019240|Ga0181510_1056478All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300019258|Ga0181504_1493410All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300019268|Ga0181514_1462674All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300020582|Ga0210395_10215112All Organisms → cellular organisms → Bacteria1442Open in IMG/M
3300020582|Ga0210395_10375917All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300021151|Ga0179584_1032390All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300021432|Ga0210384_10135894All Organisms → cellular organisms → Bacteria2207Open in IMG/M
3300021477|Ga0210398_11405814All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300022504|Ga0242642_1026506Not Available818Open in IMG/M
3300022505|Ga0242647_1012915All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300022508|Ga0222728_1050791All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300022510|Ga0242652_1045507Not Available544Open in IMG/M
3300022511|Ga0242651_1048775All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300022512|Ga0242676_1021971All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300022513|Ga0242667_1015125All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300022513|Ga0242667_1019318All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300022522|Ga0242659_1047287All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300022522|Ga0242659_1055970All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300022523|Ga0242663_1059294All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300022528|Ga0242669_1047886All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300022528|Ga0242669_1054372All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300022529|Ga0242668_1046208Not Available762Open in IMG/M
3300022529|Ga0242668_1054694All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300022529|Ga0242668_1057800All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300022529|Ga0242668_1066193All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300022532|Ga0242655_10104691Not Available782Open in IMG/M
3300022532|Ga0242655_10166447Not Available655Open in IMG/M
3300022708|Ga0242670_1019177Not Available803Open in IMG/M
3300022708|Ga0242670_1021915All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300022708|Ga0242670_1025663All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300022711|Ga0242674_1033489All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300022713|Ga0242677_1030370All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300022713|Ga0242677_1037803All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300022713|Ga0242677_1039332All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300022714|Ga0242671_1035890All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300022715|Ga0242678_1025709Not Available746Open in IMG/M
3300022715|Ga0242678_1026201All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300022716|Ga0242673_1048183All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300022717|Ga0242661_1054197All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300022718|Ga0242675_1048805All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300022718|Ga0242675_1049858All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300022722|Ga0242657_1080158All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300022722|Ga0242657_1102439All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300022722|Ga0242657_1103086All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300022724|Ga0242665_10131388All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300023557|Ga0247521_112025All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300023557|Ga0247521_112090All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300023561|Ga0247518_114443All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300023654|Ga0247535_102176All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300023660|Ga0247550_101291All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300023672|Ga0247553_104038All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300023672|Ga0247553_104495All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300025898|Ga0207692_10454641All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300025916|Ga0207663_10286074All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300025929|Ga0207664_10992651All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300027439|Ga0209332_1038413Not Available893Open in IMG/M
3300027725|Ga0209178_1154718All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300027908|Ga0209006_10718818All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300027986|Ga0209168_10405014All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300028536|Ga0137415_10956669All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300029882|Ga0311368_10375169All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300030730|Ga0307482_1111073All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300030759|Ga0265745_1006665All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300031231|Ga0170824_100077057All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300031663|Ga0307484_109961All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300031718|Ga0307474_11520778All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300031817|Ga0316046_105317All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300031823|Ga0307478_11695378All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300031866|Ga0316049_106816All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300031866|Ga0316049_107381All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300031871|Ga0316036_107276All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300031955|Ga0316035_107336All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300031955|Ga0316035_109711All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300031955|Ga0316035_115048Not Available607Open in IMG/M
3300032119|Ga0316051_1014092All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300032515|Ga0348332_10191550All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300032515|Ga0348332_10345457All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300032515|Ga0348332_11984142All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300032515|Ga0348332_13474753All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300032515|Ga0348332_14340682All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300032783|Ga0335079_10288643All Organisms → cellular organisms → Bacteria1793Open in IMG/M
3300032895|Ga0335074_10965692All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300032896|Ga0335075_10924870All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300032954|Ga0335083_10429247All Organisms → cellular organisms → Bacteria1122Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil34.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.17%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil9.24%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.88%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter4.20%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.36%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.52%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.52%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.68%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.84%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.84%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.84%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004119Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004121Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004472Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004474Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004614Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004617Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011050Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011086Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011089Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011090Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011110Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019158Soil microbial communities from Bohemian Forest, Czech Republic ? CSI1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019166Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019178Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019186Soil microbial communities from Bohemian Forest, Czech Republic ? CSE3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019187Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019188Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019240Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019268Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022511Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022529Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022711Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023557Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023561Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023654Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023660Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023672Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030759Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031663Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031817Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031866Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031871Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031955Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032119Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058887_150541623300004119Forest SoilMSWRPTSPESLELLRQVRREIAEQGDGRLALLLAGVELYAVLGREFDLLEVMRSFAHDMH
Ga0058901_100786313300004120Forest SoilMPWQPSSEDSIELLRRLRRQVAERGDQRLALLLAGVELYAVLGREFELLEIMR
Ga0058882_102160923300004121Forest SoilMPWRPTSPESLELIRQVRREIAERGDFRLALLLAGVELYAVLEREFDLLE
Ga0062386_10001463813300004152Bog Forest SoilMSWHPTDPESIEQIRRLRFEVAERGDARLALVLAGVELYATLGREYELLEVMRTFAHDMHAA
Ga0068974_135261923300004472Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGDSRLALLLAGVELYAILGREFDLLEIMRSFA
Ga0068968_144867013300004474Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGDSRLALLLAGVELYAILGREFDLLEIMRSFAHDMH
Ga0068956_137880713300004614Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGDSRLALLLAGVELYAILGREFDLLEIMRSFAHDM
Ga0068955_124464313300004617Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGDSRLALLLAGVELYAILGREFDLLEIMRSFAHD
Ga0058899_1015200923300004631Forest SoilMPWRPTSPESLESIRRLREEVEERGDRRLALLLAGVELYATLGREFELLEIMRAFAHEMH
Ga0066388_10832091123300005332Tropical Forest SoilMPWRPTSAESLESLRQLRHEVEERGDRRLALLLAGIELYATLGREFDLLETMRTFAHEM
Ga0070731_1057367913300005538Surface SoilMPWRPTNPESLELLRQVRREIAERGDNRLALLLAGVE
Ga0070763_1017861833300005610SoilMPWRPTNPESLELLRQVRREIADRGDGRLALLLAGVELYVVLGREFDLLESMRSFAHD
Ga0070765_10195205813300006176SoilMPWQPSSEDSIELLRRLRRQVAERGDQRLALLLAGVELYAVLGREFELLEIMRSFAHDMHEAVEG
Ga0099829_1035640113300009038Vadose Zone SoilMSWRPTNPESLELLRRLRNELVERGDERLALLLAGVELYATLGREYELLD
Ga0116216_1065723223300009698Peatlands SoilMPWRPTNPESLELLRQARREIAARGDGHLALLLAGVELYAVLGREFDLLEVMRSFAHDMNQAV
Ga0116219_1081421923300009824Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGDSRLALLLAGVELYAILGREFDLLEIMRSFAHDMHQAV
Ga0126379_1073304613300010366Tropical Forest SoilMSWHPTDPESIELLRRLRYEVAGRGDARLALVLAGVELYATLGREYELLEV
Ga0126344_113298113300010866Boreal Forest SoilMPWRPTNPESLDLLRQVRREIAERGDSRLALLLAGVELYAVLGREFDLLEI
Ga0138571_15617313300011050Peatlands SoilLLRHALAANHPDSLDLLRQVRREIAERGNSRLALLLAGVELYAILGREFDLLEIMRSFAHDMHQAVEGTP
Ga0138564_111878723300011086Peatlands SoilMPWRPTNPDSLDLLRQVRREIGERGDSRLALLLAGVELYAILGREFDLLD
Ga0138573_109699323300011089Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGDSRLALLLAGVEL
Ga0138579_112130923300011090Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGNSRLALLLAGVELYAILGREFDLLEIMRSFAHDMH
Ga0138578_108072823300011110Peatlands SoilMPWRPTNPDSLDLLRQVRREIAERGDSRLALLLAGVELYAIL
Ga0150983_1322315523300011120Forest SoilMPWRPTSHESLELLRQVRREIAERGDGRLALLLASVELYAVLGREFDLL
Ga0187812_121965123300017821Freshwater SedimentMSWHPTDPESIELLRRLRHEIAERGDDRLALVLAGVELYATLGREYELLE
Ga0187818_1034883013300017823Freshwater SedimentMSWHPTDPESIELLRRLRHEIAERGDARLALVLAGVELYATLGREYELLEVMRTFAH
Ga0187783_1139020023300017970Tropical PeatlandMPWRPTNPESLELLRQARREIAERGDSRVALLLAGVELY
Ga0184580_12410323300019158SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLEREFDLLEVMRTFAHDMHQAVEG
Ga0184595_11146923300019166SoilMSWRPSSPESLELVRQVRREIAERGDGRLALLLAGVEL
Ga0184595_12210323300019166SoilMPWRPTSPESLELLRQVRREIAERGDGRLALLLAGVELYA
Ga0184595_12387013300019166SoilMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIMREFAHDMQQVWKARPRCASWSNCLS
Ga0184583_12100413300019178SoilMSWRPSSPESLELVRQVRREIAERGDGRLALLLAGVELYAVLGREFDL
Ga0184588_13059523300019186SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLEREFDLLEV
Ga0184584_11552413300019187SoilMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLGREFD
Ga0184599_11829623300019188SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLEREFDLLEVMRTFAHDMH
Ga0181510_105647813300019240PeatlandVEDDLFHSFVMPWRPTNPESLELLRQVRREIAERGDGRLALLLTGVELYALLGREFDL
Ga0181504_149341023300019258PeatlandVEDDLFHSFVMPWRPTNPESLELLRQVRREIAERGDGRLALLLTGVELYALLGREFDLLDVMRSFAHDMHQVVED
Ga0181514_146267413300019268PeatlandVEDDLFHSFVMPWRPTNPESLELLRQVRREIAERGDGRLALLLTGVELYALLGREFDLLDVMRSFAHDMHQVV
Ga0210395_1021511243300020582SoilMPWRPTSPESLELIRQVRREIAERGDFRLALLLAGVELYAVLEREF
Ga0210395_1037591733300020582SoilMPWRPTSPESLESIRRLREEVEERGDRRLALLLAGVELYATLGREFE
Ga0179584_103239013300021151Vadose Zone SoilMSWRPTNPESLELLRRLRNELVERGDERLALLLAGVELYATLGREYELL
Ga0210384_1013589443300021432SoilMPWRPTSQESLESIRRLRHEVEERGDRRLALLLAGLELYATLGREF
Ga0210398_1140581413300021477SoilMPWRPTNPESLELLRQVRREIADRGDGRLALLLAGVELYVVLGREF
Ga0242642_102650623300022504SoilMPWRPTSPESLESIRRLRHEVEERGDRRLALLLAGLELYATLGREFELLETMQTFAREMHEAVQG
Ga0242647_101291513300022505SoilMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIMRAFAHDMHQVV
Ga0222728_105079123300022508SoilMNWRPSSSESLELLRHVRREIAERGDGRLALLLAGVEL
Ga0242652_104550723300022510SoilMLRRLRYKISELGDSRLALVLAGVELYITLGREFELLEVMRSFAHDMHDAVQGTPTAK
Ga0242651_104877513300022511SoilMNWRPSSSESLELLRHVRREIAERGDGRLALLLAGVELYAVLGREFDL
Ga0242676_102197123300022512SoilMPWRPTNSESLELLRQVRREIAERGDNHLALLLAGVELY
Ga0242667_101512523300022513SoilMPWRPTNPESLELLRQVRREIADRGDGRLALLLAGVELYVVLGREFDLLESMRSFAHDM
Ga0242667_101931823300022513SoilMPWRPTNPESLELLRQVRREIAERGDGRLALLLAGVELYAVLG
Ga0242659_104728733300022522SoilMPWRPTSPESLELLRQVRREIAERGDSRLALLLAGVELYA
Ga0242659_105597013300022522SoilMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVL
Ga0242663_105929423300022523SoilMPWRPTSPESLELLRQVRREIAERGAFRLALLLAGVELYAVLEREFDLLEIMR
Ga0242669_104788613300022528SoilMPWRPTSPESLELIRQVRREIAERGDFRLALLLAGVELYAVLEREFDL
Ga0242669_105437213300022528SoilMPWRPTNPESLELLRQVRREIAERGDGRLALLLAG
Ga0242668_104620813300022529SoilMPWRPTSPESLESIRRLREEVEERGDRRLALLLAGVELYATLGREFELLE
Ga0242668_105469423300022529SoilMPWRPTNPESLELLRRVRREIAERGDSRLALLLAGVELYAVLGR
Ga0242668_105780013300022529SoilMNWRPSSSESLELLRHVRREIAERGDGRLALLLAGVELYAVLG
Ga0242668_106619323300022529SoilMPWRPTSPESLELLRQVRREIAERGDSRLALLLAGLELYA
Ga0242655_1010469113300022532SoilMPWHPTSPESLESIRLLRQEVEERGDRRLALLLAGIELYATLGREFELLEIMRA
Ga0242655_1016644713300022532SoilMLRRLRYKISELGDSRLALVLAGVELYATLGREFELLEVMRSFAHDMHDAVQG
Ga0242670_101917713300022708SoilMPWRPTSPESLESIRRLREEVEERGDRRLALLLAGVELYATLGREFELLEIMRAFAHEMHEAVQ
Ga0242670_102191523300022708SoilMPWRPTNSESLELLRQVRREIAERGDSRLALVLAGVELYAVLGREFELLEVMRSFAHDMHPAVKV
Ga0242670_102566313300022708SoilMPWRPTSPESLELLRQVRREIAERGDSRLALLLAGV
Ga0242674_103348913300022711SoilMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIM
Ga0242677_103037023300022713SoilMPWRPSSPESLELLRQVRREIVERGDTRLALMLAGVELYAVLGREFE
Ga0242677_103780323300022713SoilMPWRPTSPESLELLRQVRREIAERGDSRLALLLAGLELYAVLGREFDLLEIMRSFAHDMHQVVE
Ga0242677_103933213300022713SoilMPWRPTSPESIELLRQVRREIAERGDFRLALLLAGVELYAVLGREFDLLEIM
Ga0242671_103589023300022714SoilMPWRPTNPESLELLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLDVMRSFAHDMH
Ga0242678_102570943300022715SoilMPWRPTSPESLELLRQVRREIAERGDSRLALLLAGVELY
Ga0242678_102620113300022715SoilMSWHPTDPESIELLRRLRYKISELGDSRLALVLAGVELYITLGREFELLEV
Ga0242673_104818323300022716SoilMPWRPTNSESLELLRQVRREIAERGDNHLALLLAGVELYAVLGREFELLEIMRSFAHDMHQAVEG
Ga0242661_105419713300022717SoilMPWRPTNSESLELLRQVRREIAERGDSRLALLLGGVELYAVLGREFELLEIMRSFAHDMHQAVEG
Ga0242675_104880523300022718SoilMPWRPTSPESLELIRQVRREIAERGDFRLALLLAGVELYAVL
Ga0242675_104985823300022718SoilMPWRPTNSESLELLRQVRREIAERGDSRLALLLGGVE
Ga0242657_108015813300022722SoilMLRRLRYKISELGDSRLALVLAGVELYITLGREFELLEVMRSFAHDMHDT
Ga0242657_110243913300022722SoilMNWRPSSSESLELLRQVRREIAERGDGRLALLLAGVELYAVL
Ga0242657_110308613300022722SoilMPWRPTNSESLELLRQVRREIAERGDSRLALLLGGVELYAVL
Ga0242665_1013138813300022724SoilMPWRPTNSESLELLRQVRREIAERGDSRLALLLGGVELYAVLGREFELLEIMRSFAHDMHQA
Ga0247521_11202523300023557SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLEREFDL
Ga0247521_11209013300023557SoilMPWRPTNPESLELLRQVRREIADRGDGRLSLLLAGVELYVVLGRESD
Ga0247518_11444323300023561SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLE
Ga0247535_10217613300023654SoilMPWRPTSPESLELLRQVRREIAERGDSRLALLLAGVELYAV
Ga0247550_10129123300023660SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLEREFDLLEVMRTFAHDMHQAVE
Ga0247553_10403813300023672SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLEREFDLLE
Ga0247553_10449513300023672SoilVGEKSPTCLAMPWRPTNPDSLELLRKARREIAERGDYRLAMLLAGVELYA
Ga0207692_1045464113300025898Corn, Switchgrass And Miscanthus RhizosphereMPWRPTSPESLESIRRLRHEVEERGDRRLALLLAGLELYATLGREFELLET
Ga0207663_1028607433300025916Corn, Switchgrass And Miscanthus RhizosphereMPWRPTSPESLESIRRLRHEVEERGDRRLALLLAGLELYATLGREF
Ga0207664_1099265113300025929Agricultural SoilLEAIRRLRQQIAENGDERLALLLAGVELYATLGREFELLEFMRHFAHDIHDAVQGTPSAK
Ga0209332_103841313300027439Forest SoilMPWRPTSSESLESIRLLRQEVEERGDRRLALLLAGVELYATLGREFELLEIMRAF
Ga0209178_115471823300027725Agricultural SoilLEAIRRLRQQIAENGDERLALLLAGVELYATLGREFELLEFMRHFAHDIHDAVQ
Ga0209006_1071881813300027908Forest SoilMPWRPTNSESLDLLRQTRREIAERGDSHLALLLAGVELYAVLGREFELLEIMQSFA
Ga0209168_1040501413300027986Surface SoilMSWHPTDPESIELLRRLRHEVAERGDARLALVLAGVELYATLGREYELLEVMRTFAHEMH
Ga0137415_1095666913300028536Vadose Zone SoilMSWRPTNPESLELLRRLRNELVERGDERLALLLAGVELYATLGREYELLDIMRLFAHEMHEAVQG
Ga0311368_1037516933300029882PalsaVGEKSPTRLAMPWRPTSPESLELLRQIRREVAARGDNRLALLLAGVELYAVLGREFDLLE
Ga0307482_111107313300030730Hardwood Forest SoilMSWHPTDPESIELLRRLRHQVAERGDARLALVLAGVELYATLGREYELLEVMRSF
Ga0265745_100666513300030759SoilMPWRPTSPESLELLRQARREIAERGDHRLAMLLAGVELYAVLGREFDLLEIM
Ga0170824_10007705723300031231Forest SoilMTWRPSSSESLELLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIMRSFAHDMHLVVKKE
Ga0307484_10996113300031663Hardwood Forest SoilMPWRPSSPESLELLRQVRREIAERGDSRLALVLAGVELYAVLGREFDL
Ga0307474_1152077823300031718Hardwood Forest SoilMPWRPSSPESLELLRELRREIAERGDSRLALLLAGVEL
Ga0316046_10531723300031817SoilMPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVL
Ga0307478_1169537823300031823Hardwood Forest SoilMPWRPTSPEALELLHRFRHEIAERGDQRLALLLAGVELYATLGREFELLEIMR
Ga0316049_10681623300031866SoilMPWRPTNPESLELLRQVRREIAERGDGHLALLLAGVELYAVLGREFDLLDVMRSFAHDMHQVV
Ga0316049_10738123300031866SoilMSWRPSSPESLELVRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIMRTFAHD
Ga0316036_10727623300031871SoilMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLG
Ga0316035_10733613300031955SoilMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIMREFAHDMQQVWKARPRCAS
Ga0316035_10971123300031955SoilMPWRPTNPESLELLRQVRREIADRGDGRLSLLLAGVELYVVLGRE
Ga0316035_11504823300031955SoilMPWRPTSPESLELLRQVRREIAERGDGRLALLLAG
Ga0316051_101409213300032119SoilMPWRPTNPESLELLRQVRREIADRGDGRLSLLLAGV
Ga0348332_1019155013300032515Plant LitterMPWRPTNPESLESIRQLRQEVEERGDRRLALLLAGVELYATLG
Ga0348332_1034545713300032515Plant LitterMPWRPTNPESLELLRQARREIAARGDGHLALLLAGVELYAVLGREFDL
Ga0348332_1198414213300032515Plant LitterMPWQPSSEESIELLRRLRRQVAERGDQRLALLLAGVELYAVLGREFELLEIMRGFAHEMNEAVE
Ga0348332_1347475313300032515Plant LitterMPWRPTSPESLELLRQARREIAERGDHRLAMLLAGVELYAVL
Ga0348332_1434068223300032515Plant LitterMPWRPTNPESLDLLRQVRREIAERGDGRLALLLAGVELYAVLGREFDLLEIMREFAHDM
Ga0335079_1028864313300032783SoilMSWHPTDPESIELLRRLRHEVAERGDTRLALVLAGVELYATLGREYELLEVMRTFAHEMPDA
Ga0335074_1096569223300032895SoilMDWRPTNPESLELLRQTRHEIAERGDSRLAMLLAGVELYAVLGREFDLLEVMRSFAH
Ga0335075_1092487023300032896SoilMSWRPTSPESLELLRQVRREIAERGDGRLALLIAGLELYVVLGREFDLLEIMRAFAHDMH
Ga0335083_1042924733300032954SoilMAWHPPSNESMELLRRLRQEVAERGDERLAMLLAGVELYAILGREFELLETMRAFA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.