Sample 3300023557

Basic Information
IMG/M Taxon OID	3300023557 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0290739 \| Ga0247521
Sample Name	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5 (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	28179540
Sequencing Scaffolds	38
Novel Protein Genes	38
Associated Families	34

Dataset Contents

Total Genome Size

28179540

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	1
Not Available	29
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Lecanoromycetidae → Lecanorales → Lecanorineae → Parmeliaceae → Bryoria → Bryoria tenuis	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22

Not Available

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Lecanoromycetidae → Lecanorales → Lecanorineae → Parmeliaceae → Bryoria → Bryoria tenuis

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Ecosystem Assignment (GOLD)

Name

Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Type

Environmental

Taxonomy

Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Czech Republic: South Bohemian Region
Coordinates	Lat. (^o)	49.0448	Long. (^o)	13.618	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Location Information

Location

Czech Republic: South Bohemian Region

Coordinates

Lat. (^o)

49.0448

Long. (^o)

13.618

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F003050	Metagenome / Metatranscriptome	510	Y
F003497	Metagenome / Metatranscriptome	483	Y
F004183	Metagenome / Metatranscriptome	449	Y
F005081	Metagenome / Metatranscriptome	412	Y
F006591	Metagenome / Metatranscriptome	369	Y
F009017	Metagenome / Metatranscriptome	324	Y
F009688	Metagenome / Metatranscriptome	314	Y
F011079	Metagenome / Metatranscriptome	295	Y
F012024	Metagenome / Metatranscriptome	284	Y
F014218	Metagenome / Metatranscriptome	264	Y
F016097	Metagenome / Metatranscriptome	249	Y
F017080	Metagenome / Metatranscriptome	242	N
F018933	Metagenome / Metatranscriptome	232	N
F024793	Metagenome / Metatranscriptome	204	Y
F026569	Metagenome / Metatranscriptome	197	Y
F028056	Metagenome / Metatranscriptome	192	Y
F030619	Metagenome / Metatranscriptome	184	Y
F031388	Metagenome / Metatranscriptome	182	Y
F036818	Metagenome / Metatranscriptome	169	Y
F050832	Metagenome / Metatranscriptome	144	Y
F058585	Metagenome / Metatranscriptome	134	N
F059538	Metagenome / Metatranscriptome	133	N
F060406	Metagenome / Metatranscriptome	133	N
F061605	Metagenome / Metatranscriptome	131	N
F062325	Metagenome / Metatranscriptome	130	Y
F065397	Metagenome / Metatranscriptome	127	Y
F067292	Metagenome / Metatranscriptome	125	N
F067447	Metagenome / Metatranscriptome	125	N
F068527	Metagenome / Metatranscriptome	124	N
F072836	Metagenome / Metatranscriptome	121	Y
F075096	Metagenome / Metatranscriptome	119	Y
F098181	Metagenome / Metatranscriptome	104	N
F102319	Metagenome / Metatranscriptome	101	Y
F106076	Metagenome / Metatranscriptome	100	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0247521_100275	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	3299	Open in IMG/M
Ga0247521_110099	Not Available	830	Open in IMG/M
Ga0247521_110281	Not Available	819	Open in IMG/M
Ga0247521_110360	Not Available	814	Open in IMG/M
Ga0247521_110445	Not Available	811	Open in IMG/M
Ga0247521_110474	Not Available	809	Open in IMG/M
Ga0247521_110478	Not Available	808	Open in IMG/M
Ga0247521_110526	Not Available	806	Open in IMG/M
Ga0247521_110566	Not Available	804	Open in IMG/M
Ga0247521_110615	Not Available	801	Open in IMG/M
Ga0247521_111030	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
Ga0247521_111974	Not Available	730	Open in IMG/M
Ga0247521_112025	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
Ga0247521_112090	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
Ga0247521_112893	Not Available	688	Open in IMG/M
Ga0247521_113657	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Lecanoromycetidae → Lecanorales → Lecanorineae → Parmeliaceae → Bryoria → Bryoria tenuis	654	Open in IMG/M
Ga0247521_113774	Not Available	650	Open in IMG/M
Ga0247521_114136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	636	Open in IMG/M
Ga0247521_114389	Not Available	627	Open in IMG/M
Ga0247521_114416	Not Available	626	Open in IMG/M
Ga0247521_114877	Not Available	609	Open in IMG/M
Ga0247521_115530	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	588	Open in IMG/M
Ga0247521_115909	Not Available	578	Open in IMG/M
Ga0247521_115990	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	576	Open in IMG/M
Ga0247521_116031	Not Available	575	Open in IMG/M
Ga0247521_116040	Not Available	575	Open in IMG/M
Ga0247521_116044	Not Available	575	Open in IMG/M
Ga0247521_116178	Not Available	571	Open in IMG/M
Ga0247521_116280	Not Available	568	Open in IMG/M
Ga0247521_116315	Not Available	567	Open in IMG/M
Ga0247521_116836	Not Available	554	Open in IMG/M
Ga0247521_117072	Not Available	548	Open in IMG/M
Ga0247521_117327	Not Available	541	Open in IMG/M
Ga0247521_117636	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	534	Open in IMG/M
Ga0247521_118097	Not Available	523	Open in IMG/M
Ga0247521_118511	Not Available	515	Open in IMG/M
Ga0247521_118737	Not Available	510	Open in IMG/M
Ga0247521_119036	Not Available	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0247521_100275	Ga0247521_1002751	F030619	MSPLQQVWTTCWSGLVLSGWDSLRVAWFLHSWVVKTVPSRGVAFTVKELKSLCHNVRGSALHSKRWKNVPCNIRKDVVDTLCRLAVRRPEDGFAFTRLSRSLPEPPLRECVKHLQAAKLIASTEFPTSTAALDSLRSFVALTPGVSGSGVLRHPRRLPSSSSSCLEWPATRGGIDGYLEHLGHMCEEAGATQSSFHAYAGDSLGAFCLRKASVVLRPCAGVAADLRESYRCAGLLYLRSQGKPFGMKATALRTPGYKVRVVGVPDCLTFVEGSWVRSSLRWLAPGHWRIDGESRAIPGGLHYRVGRRFASLDLSKATDGLSHAAIRVVIEGLAARGLIRLADLTMSLRSLGLERGATWSFPDLGDKVGEGSFLRGSPMGTPLSFVVLSWVNAWATKAFSQAITHGDDAVGRYRPGSGELSLYASRVSSVGASLNREKTFMADHSWTACEILALPRKYNEDRMSLFFPPSIPPPALRAPVEADQRLENLWLRRMERIMKSRFPWIVKDPRLHLPVQVGGLGYTGRGLAVGVSVRCRLGALVSRGPSAVIAADLIGKKPFREVGLYPRPLCRVVRPGSYWKAVQATEQWFQAGGDTHVPLESLLSFKSCLIEDEIRLLEGDKFKRKRVAGRPDRTRKGAVFRRLGVALCRPLSRRWGCSALIRWALLSRESEVTVPEDI
Ga0247521_110099	Ga0247521_1100991	F068527	LNLDDQVVQPAVASLGYPSGEPAAFAAAPSSGCADALLSACAYSPAPRLDRRPTSPARIGVFSPGSTGGKHPAFTVCYALPADWLPTSQLALVSSLQLGLRLLPTHIWRRPSARLARTTSGFRRLLLQLPACAFCRCNLQACARLLPPFAKPVVILRLASAVSPSGFTGFDSPGLRLALHTSGWAFDTPLTSTEPCIAG
Ga0247521_110281	Ga0247521_1102811	F009688	VFGLVAGPSNALRPWILSEAFQLASAGGCATGLPTRSRHACNFLVRVLTTGSGSATAFGGAFARNHGSRLFTLKLPLFHSPAVSFLISPALGSFSRGLPSRRVLPDAITLFVRLSAYLILASSTFYF
Ga0247521_110360	Ga0247521_1103602	F098181	PPRLAVAPSGIAPCSTLGFACFPRIAPCSAFSARRRSPILLGVQRLAPCASCGLLRTQRLAPVLVTDHSVPRIAPCSALETPPRIWIAPYTTLSLHASLLDYSTLAAFCSTSPHGSLRKLRLALCAGLRITPYANTCCPCSVRGLLRVPL
Ga0247521_110445	Ga0247521_1104451	F006591	GPWALAPSQVGGRLLDASSRGNAELSVSWQDRRPDCSRRLLGEAFQHGSPIPCRGSAPHMVMRPLRHGLVTAVLQVGPRELPPERWPEGTGLASYPSIDI
Ga0247521_110474	Ga0247521_1104741	F067447	SRVAGPNPPHFAPRKNYFLLDTYTKRYTRIAPWLTLSACAGRGLLRAQHFSALPRSRIAPRSTLGFQRLTRIAPCPALPALMLNPDCSVFSTCRSVPCTDCSALVPSRSAPATNYFVLDTWPFRPAPGCLRALDVLPCAVYRSLGVQHLALAPVTNYFVLDTWPSVQRPDASVLSTSRPALPADCSALTALRCASYGLLHAWHLALAPVKDYSSLDT
Ga0247521_110478	Ga0247521_1104782	F067292	LDESVVQPLLRPLATPAADPQLALATASTGCAGFKPPTCVGCSTSGSTGGQPSGSDRCSVLRLDRWQAPGFHRLLCASVRPGADLPACAGVHPPARPATNCRLTPGADSSARLVPNFRLSPVVVAAFGLRLLLLRLLQLALGVARLPYRRRTSDSHRLLRRPASPVSTHSTCVECFYFRLGLRCTPCFDWTLHRRTSRR
Ga0247521_110526	Ga0247521_1105261	F018933	VPSCWSQPSLLRRSRITPRSTLDSLYRPRIAPRSVLIDRCCPPIARRSTLNARRRSQIAPRSTLCARAGHGLLHVQHLESSPRVQIAPYSTLCAPRRSQIAPRSTLPARYRSRIAPLSAIDAPCRSTDISVRLHFAPCAVHGLLRAQHFKLRTAHRLLCVRRLHFVPIADCSAFLTPCLVSLADCSVLNT
Ga0247521_110566	Ga0247521_1105661	F011079	MLKTTPLDCETKCSLRVKRRDPWLGANAPSKTVADPKPVVKTREASRRRVLTWFASRWRNHQLKRAEKPHSKSAHRKVPDGPATRPKTPLAVENGVGKPAAPEKGAPNAGSGKRDWRTPI
Ga0247521_110615	Ga0247521_1106152	F011079	LREKRRDPWLWANASSKAMADPKPVVKTRENNRRRVLTWFAGRWRNHQLKRAEKPHSKSVRRKVPDGPATRPITPLAVENGVGKLAAPEKGAPNAG
Ga0247521_111030	Ga0247521_1110301	F003050	MESAKAEIVAGEEKAVTSERSSFGMISCGAPESVEAVIAKAVAGEQTGKAYGAPKRGAQYGCMPVVSKAGNRH
Ga0247521_111974	Ga0247521_1119741	F012024	MHGTEHRVSERRALRLLAPRKPVYPASASKLPDTPQPLCLSKTGPFARDGLSLARMISACADSIPESKILACHFAHSLASLSARSAFWLRRQPLVCPSFRLHPRLKPVAFFTGLLCRLCRLLPLPFRSFRSLGIKASTGFATVRSTFRNRPIFVRSPQPFH
Ga0247521_112025	Ga0247521_1120252	F075096	MPWRPTSPESLELLRQVRREIAERGDFRLAMLLAGVELYAVLEREFDL
Ga0247521_112090	Ga0247521_1120901	F075096	MPWRPTNPESLELLRQVRREIADRGDGRLSLLLAGVELYVVLGRESD
Ga0247521_112893	Ga0247521_1128931	F058585	LDHSQYSRCCVLRLPQWPPSSFRWRCYHWLRWLSELRLASGPCTPARPVANLPARIGFVSFGSTGCKPPTCVDCSALPLVLRRSIWLAPDDPGLIGLAPDNPGSTRLAPHGPFLRLGRQPTSDSHRCRPLARLAASSGLRLMLPLPLGWLRFQFALAASPSALTVREPLGLRLVAPSPAEPVMHSLFQLNLASPAKPSMSILYPLALASSGIFQLNNFRLGSAFALLV
Ga0247521_113657	Ga0247521_1136571	F106076	WKPVNTIANITVATNPYKAPLLFPXIKEWXAYVTVTPEDNKITVLSKGNSKGLIASIPIGGHWAPNSTVGDKALXKKAQNIAKKNNASLTINKATPMFNPLCTANVXFPRYVPSLITSRHHNVIEEIRDKKANIKNVFALLKPCIVNTPLVVNVSKAIHVYKGHGEGETKXKGWAXKLLLVKLVTYNISVASKSI
Ga0247521_113774	Ga0247521_1137741	F005081	MADCTILTITCDQQFLTLLRKELHDQVGVMHPMIVATTIDEACSLLPMAHPRLIVVHWNRHGGRSEELNRLLWATTVLARGVPVLVIADRYRVDQATTFYRMGVAEYISRTHHQAQFGRILDTYLRHRPAASQPGADSSDDAIQTVKAWSANSQPLKAQVV
Ga0247521_114136	Ga0247521_1141361	F036818	KNIQLSSVAGAGLLVFSLGAVAQDRDQDAYHSDRDAYFHDQHWRGHLFERVREDVQHVQAATWPGGGDQYRLGSTIDQLNVLQDKLANHVYDERDLDAVIGTLSRVVTDNRMAPRDRDILTDDLSRLRDYRANHADWDR
Ga0247521_114389	Ga0247521_1143891	F059538	VNSVVQPLLRPSATPAARLQLSLPLLPLAAPVSNLRLASAALPPARPRANPPARIGVVSPGSVGGKCSAFAAYYALPIDWLLTFQLALASCLQLGLRLLPTHIWRCPSARQVSQFPVLTGYCCNN
Ga0247521_114416	Ga0247521_1144161	F060406	LGELNSTTGCRVLRLPQRPTSRFRLRSRPLAALAPNLRLASPASHSSSTGGRLRRLGSTFCRSARTVANLRLSPALRASVRPLADLPTFVGVLPQARPRTNFRFAPDFDPSTRLVSNFRFAPVVVATSACAFCCCGLWLAPVPPVCQTGGEPPTRIGCPSSGFTGFDSLGLRLVLLPPAGLLMHP
Ga0247521_114877	Ga0247521_1148771	F016097	KTLTFNFTSNPIHSTKMSLRVVIAFLGLAVVGTYGERVNCRESRRGDGTVGFDCAAVVPTSDLVAQNLYILWLQSNRQGQNHALNIDVPNYQIQDVIQAAAKGGSAQSNTKINVNLARPDFSYIAQKEEKVGEVSQSFDVNLQYERINGKSVHFSDDGAGSERYSALRGNVAEPSG
Ga0247521_115530	Ga0247521_1155302	F065397	VQVRVFVSTLYSPHKLTLVLAIPMTTATTDMRWIEIAPPQRVFMGRRRALEKTLRPITEERSLSNGELMDGLRPTFPSVSGFKAEDDNERFASAEC
Ga0247521_115909	Ga0247521_1159091	F061605	MHGTELCSQIRRAFFLSAPRFLLSKAADRCFQARLRASLTGADISKRPFALPKRLPVSEPPFRGQRSRPTPSMPCRSLALPVRLSAPPRAPVRPGTREITAKNPLPDSRSALPTVSRISTPLQGLSNPSGSKRSIRFPIWKLTFRIAPDCPSLPGFGSILLVPLPDHRSRLAKRPVACC
Ga0247521_115990	Ga0247521_1159901	F065397	VQVRVFVSRLYSPHKLTLVMAILMTKATTDMRWTEVAPPRRVFMGRWRPLEKTLRPIAEERSLSNGELMDGLRPTFPAVSGFKAADDNERFASAEC
Ga0247521_116031	Ga0247521_1160311	F003497	DPLNSPLPDRHARPKHGSQRIGDIALLLPVTAFIRLRISAPELIRHFYLLEAFVSERPFARPQRLFSFENHRSEVKAPDLSLRRNSELFFQPVRPSAPTLDGVHHASGDVRCTRPVAVSRAQNSQTSIQPSLPVRTFIPPDRSAQSAAGSEKLTLVRGPFFLRSPKASITF
Ga0247521_116040	Ga0247521_1160401	F031388	VSRKAAESVERFDPEGCKSPGGEWRQRKQLRGPARRAATGLKRRSCPQLGQTSEGRGVEGGPGSEPSGGVAKWQVRTVDPGMEASEKEQPLRARERPLRATGSVEKRDAVWPEGTDPGAEKSSLGERNGEAPRTS
Ga0247521_116044	Ga0247521_1160441	F062325	PISSLAHHGHATVLSIALQIAVRPACLLPGNRFGGYRFKAFRRAAAYYLKLNRSLVTAFPSPATASAFTDSIPGSKVPACYFAVSLTG
Ga0247521_116178	Ga0247521_1161781	F050832	MVMDAAAADKTKMMEEEKDGPSRAMLRSILLSVLHV
Ga0247521_116280	Ga0247521_1162801	F026569	MHGTEHRVSERRALRLLAPRKPVYPASASSLPDAPQPLCLSKTGPFARNGLSLTRVISACADSIPGSKVLACHFAHLLAGLSCPFGFLTPPPAAGLPQLPAASTPQTRCTLYRPALPAVPPASAPLQEFSLPRDQSLGWCRNRSVHLPESPDLRSLPVAFPLKDSATDHRSRSATFPEACCS
Ga0247521_116315	Ga0247521_1163151	F028056	PGFTARLSEPPACSAFDPQPNTPDSTFAARRRRFSARAGSVQQTFPQRTCIRPEPETRNGLSLARNDAFATITRSTFLACPFDSTYKLCADPFHRKLSARFGFEAETGRIHHLRPVIHAPLMRSHDATPSPLPFGLFLPSGSKRSTGFITGSSPYRTPDLPFTPRCAFFRLRFGSVLKTPLRPVWLSF
Ga0247521_116836	Ga0247521_1168361	F004183	GPNGCEASGCYDPEGAKTPEGERKQAAQPAERAGHERNGLEAWMRPVAGANQQLAAEPESRTGTKTSKRVSEVAGQDH
Ga0247521_117072	Ga0247521_1170721	F017080	LDESVVQPVLRPSATPEANLQLSLAIASSGCAGVESPTCVGESTSGSTVGQPSGSDRCFVLRLDRWHALGFRRVLCASVRPGADLPTCVGVHPPARPATNCRLTSGVHPSARLVSNLRFSPAVVTAFSLRLLLLRLSSLRWLSPVCHTGCELPTRIGCYGLRLYRFRPTRLASNVSTSGWAF
Ga0247521_117327	Ga0247521_1173271	F024793	VNSASPELSLWFQRSRINQPDPAFPRSPGIIHKLENFNFTLNRP
Ga0247521_117636	Ga0247521_1176361	F014218	MGLETMDLDGLGIKFQALLLVGEKLLNILALISLELNHLSHLSIDDDGAIASKFLLDD
Ga0247521_118097	Ga0247521_1180971	F009017	HISFSNVPISSLAHHGHATVLSIAFRIAVRFACLLPGNRFSGYRFNAFRRAAAFYPKLDRSLVTAFSSPATASAFTDSIPRSMVLACYFAVSPAGFRARSVFPLHRRNWFAPIPAASTLQTRCTSTRKLIRPLSPSPLPSGSFSSLGIKAFNGRRCRPVRLPNPPDFRSLPAAC
Ga0247521_118511	Ga0247521_1185111	F072836	APACARRVPLAWTGQMEGRSVRGKASRALLDDVARALLVAPRAPGSPARTVMRPGGPRHSSCRPRLLFDAAPRRATPSKEPGCLLPRRNPYASGGWLLRARLDRGLVTPPPERHCSETRAPLLPALQRLLLTRKALEPARPTVSRGAEASLERPVAAPVTASTTESARGQM
Ga0247521_118737	Ga0247521_1187371	F050832	MVMDVAAADKTNLMKEEKDEPSRAMLRSILLSILHV
Ga0247521_119036	Ga0247521_1190361	F102319	LGPITSWSKSLLRCKSKPEVMDAATADRTGLMKKKKHGPSRAMLRSILLSVLHV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300023557: Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences