Metagenome / Metatranscriptome Family F074109

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074109
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	96 residues
Representative Sequence	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Number of Associated Samples	117
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.00 %
% of genes near scaffold ends (potentially truncated)	70.00 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.833 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.35% Coil/Unstructured: 82.65%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00078	RVT_1	10.00
PF03401	TctC	5.00
PF04392	ABC_sub_bind	2.50
PF02518	HATPase_c	1.67
PF01593	Amino_oxidase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.00
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
All Organisms	root	All Organisms	43.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
cellular organisms	root	All Organisms → cellular organisms	43.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.67 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	1.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.17 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	1.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	22.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.67 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	22.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.67 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.67 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	2.50 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.67 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.83 %
Mesorhizobium sp. LNJC395A00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNJC395A00	0.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02GCBDY	Not Available	555	Open in IMG/M
2209111022\|2221198223	Not Available	576	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10068681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	899	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10100726	Not Available	609	Open in IMG/M
3300001867\|JGI12627J18819_10325124	Not Available	621	Open in IMG/M
3300002558\|JGI25385J37094_10097337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	879	Open in IMG/M
3300002914\|JGI25617J43924_10324349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	532	Open in IMG/M
3300003705\|Ga0008094_108101	Not Available	636	Open in IMG/M
3300004092\|Ga0062389_103744561	Not Available	571	Open in IMG/M
3300005147\|Ga0066821_1007966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	718	Open in IMG/M
3300005167\|Ga0066672_10496953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	793	Open in IMG/M
3300005332\|Ga0066388_100264145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2362	Open in IMG/M
3300005466\|Ga0070685_10411208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	939	Open in IMG/M
3300005518\|Ga0070699_102088679	Not Available	517	Open in IMG/M
3300005554\|Ga0066661_10393641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300005559\|Ga0066700_10519451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	830	Open in IMG/M
3300005764\|Ga0066903_104668182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	729	Open in IMG/M
3300005983\|Ga0081540_1029819	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300006028\|Ga0070717_11671213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	576	Open in IMG/M
3300006163\|Ga0070715_10015627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2836	Open in IMG/M
3300006172\|Ga0075018_10043768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1840	Open in IMG/M
3300006580\|Ga0074049_12808477	Not Available	693	Open in IMG/M
3300006791\|Ga0066653_10386649	Not Available	714	Open in IMG/M
3300006800\|Ga0066660_11368667	Not Available	554	Open in IMG/M
3300006871\|Ga0075434_102601372	Not Available	506	Open in IMG/M
3300006904\|Ga0075424_101163346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300006914\|Ga0075436_100645763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	781	Open in IMG/M
3300006939\|Ga0081244_1534945	Not Available	640	Open in IMG/M
3300009029\|Ga0066793_10649476	Not Available	600	Open in IMG/M
3300009792\|Ga0126374_11345739	Not Available	579	Open in IMG/M
3300010043\|Ga0126380_10679854	Not Available	824	Open in IMG/M
3300010329\|Ga0134111_10289003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300010335\|Ga0134063_10551581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	582	Open in IMG/M
3300010358\|Ga0126370_11287723	Not Available	684	Open in IMG/M
3300010359\|Ga0126376_11852893	Not Available	642	Open in IMG/M
3300010362\|Ga0126377_12812527	Not Available	561	Open in IMG/M
3300010376\|Ga0126381_103967136	Not Available	576	Open in IMG/M
3300010399\|Ga0134127_11780971	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300010400\|Ga0134122_10827315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	887	Open in IMG/M
3300010868\|Ga0124844_1061896	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300010868\|Ga0124844_1178826	Not Available	787	Open in IMG/M
3300011120\|Ga0150983_11999723	Not Available	719	Open in IMG/M
3300011269\|Ga0137392_10464104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1052	Open in IMG/M
3300012201\|Ga0137365_11324938	Not Available	510	Open in IMG/M
3300012202\|Ga0137363_10057397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2814	Open in IMG/M
3300012207\|Ga0137381_11230606	Not Available	642	Open in IMG/M
3300012208\|Ga0137376_11665397	Not Available	529	Open in IMG/M
3300012351\|Ga0137386_10822694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	667	Open in IMG/M
3300012357\|Ga0137384_11437057	Not Available	538	Open in IMG/M
3300012362\|Ga0137361_11756275	Not Available	539	Open in IMG/M
3300012402\|Ga0134059_1046035	Not Available	514	Open in IMG/M
3300012961\|Ga0164302_11029335	Not Available	644	Open in IMG/M
3300012984\|Ga0164309_11787406	Not Available	527	Open in IMG/M
3300012989\|Ga0164305_10100961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1852	Open in IMG/M
3300015077\|Ga0173483_10570588	Not Available	617	Open in IMG/M
3300015358\|Ga0134089_10348013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	624	Open in IMG/M
3300015372\|Ga0132256_102309421	Not Available	641	Open in IMG/M
3300015374\|Ga0132255_103571880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	661	Open in IMG/M
3300018066\|Ga0184617_1212963	Not Available	576	Open in IMG/M
3300018465\|Ga0190269_10472973	Not Available	804	Open in IMG/M
3300018482\|Ga0066669_11154214	Not Available	699	Open in IMG/M
3300020579\|Ga0210407_10107735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2121	Open in IMG/M
3300021168\|Ga0210406_10626838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	836	Open in IMG/M
3300021439\|Ga0213879_10118894	Not Available	751	Open in IMG/M
3300021444\|Ga0213878_10011344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3171	Open in IMG/M
3300021478\|Ga0210402_11685117	Not Available	560	Open in IMG/M
3300022507\|Ga0222729_1013589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	890	Open in IMG/M
3300022525\|Ga0242656_1053623	Not Available	706	Open in IMG/M
3300022529\|Ga0242668_1121907	Not Available	550	Open in IMG/M
3300022533\|Ga0242662_10216304	Not Available	609	Open in IMG/M
3300022720\|Ga0242672_1049304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	704	Open in IMG/M
3300022724\|Ga0242665_10191965	Not Available	668	Open in IMG/M
3300022726\|Ga0242654_10317992	Not Available	577	Open in IMG/M
3300025906\|Ga0207699_10802355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	692	Open in IMG/M
3300025919\|Ga0207657_11187992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300026334\|Ga0209377_1213097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	639	Open in IMG/M
3300026341\|Ga0257151_1035299	Not Available	538	Open in IMG/M
3300026345\|Ga0257148_1024588	Not Available	503	Open in IMG/M
3300026446\|Ga0257178_1039752	Not Available	600	Open in IMG/M
3300026497\|Ga0257164_1049881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	669	Open in IMG/M
3300026497\|Ga0257164_1056971	Not Available	635	Open in IMG/M
3300026683\|Ga0208210_100821	Not Available	550	Open in IMG/M
3300027787\|Ga0209074_10235926	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300027874\|Ga0209465_10673461	Not Available	509	Open in IMG/M
3300028673\|Ga0257175_1083396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	615	Open in IMG/M
3300028719\|Ga0307301_10138910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300030945\|Ga0075373_11460834	Not Available	601	Open in IMG/M
3300030973\|Ga0075395_10012160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	580	Open in IMG/M
3300031043\|Ga0265779_108459	Not Available	602	Open in IMG/M
3300031226\|Ga0307497_10556176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	574	Open in IMG/M
3300031474\|Ga0170818_102810459	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300031543\|Ga0318516_10120349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1496	Open in IMG/M
3300031543\|Ga0318516_10642170	Not Available	604	Open in IMG/M
3300031544\|Ga0318534_10058579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNJC395A00	2167	Open in IMG/M
3300031545\|Ga0318541_10044643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2255	Open in IMG/M
3300031546\|Ga0318538_10082105	Not Available	1638	Open in IMG/M
3300031549\|Ga0318571_10310193	Not Available	595	Open in IMG/M
3300031564\|Ga0318573_10550145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	621	Open in IMG/M
3300031668\|Ga0318542_10290692	Not Available	835	Open in IMG/M
3300031724\|Ga0318500_10365477	Not Available	714	Open in IMG/M
3300031748\|Ga0318492_10498748	Not Available	645	Open in IMG/M
3300031769\|Ga0318526_10188308	Not Available	842	Open in IMG/M
3300031770\|Ga0318521_10052409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2110	Open in IMG/M
3300031778\|Ga0318498_10512742	Not Available	527	Open in IMG/M
3300031792\|Ga0318529_10541929	Not Available	540	Open in IMG/M
3300031793\|Ga0318548_10618462	Not Available	526	Open in IMG/M
3300031794\|Ga0318503_10212236	Not Available	627	Open in IMG/M
3300031799\|Ga0318565_10193669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	988	Open in IMG/M
3300031832\|Ga0318499_10033266	Not Available	1870	Open in IMG/M
3300031880\|Ga0318544_10033380	Not Available	1798	Open in IMG/M
3300031894\|Ga0318522_10245478	Not Available	678	Open in IMG/M
3300032009\|Ga0318563_10447524	Not Available	698	Open in IMG/M
3300032025\|Ga0318507_10380850	Not Available	614	Open in IMG/M
3300032051\|Ga0318532_10221549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	671	Open in IMG/M
3300032063\|Ga0318504_10268487	Not Available	804	Open in IMG/M
3300032066\|Ga0318514_10054555	Not Available	1942	Open in IMG/M
3300032180\|Ga0307471_100152884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2223	Open in IMG/M
3300032261\|Ga0306920_102700294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	678	Open in IMG/M
3300033412\|Ga0310810_10282051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1801	Open in IMG/M
3300034820\|Ga0373959_0212841	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.33%
Host-Associated	Host-Associated	6.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.83%
Plants	Host-Associated → Plants	6.67%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Sediment	Environmental → Aquatic → Sediment	1.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.17%
Loam	Environmental → Terrestrial → Soil → Loam	10.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.67%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003705	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026683	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN352 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031043	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_06228150	2170459003	Grass Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
2222021650	2209111022	Grass Soil	MDRLETWEIPFTSACERTGSSGSRSNNDPGLEGPSDLPGAQTARHEARRSAWTSEAKQISDRGCVAGSRSTPIGPVTSGNRT
AF_2010_repII_A1DRAFT_100686812	3300000597	Forest Soil	MDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
AF_2010_repII_A001DRAFT_101007261	3300000793	Forest Soil	MDRLGTWEVPLTSTRISRQFGSPVEQRPWPRRLSDLLGAQAARHEARRIAWTPEAKQISDRICVAGSRSTSIVPATSGNRTHRDPIEESGVPCGE
JGI12627J18819_103251242	3300001867	Forest Soil	MDRLGTWEVPFTSTCELTGSLGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEES
JGI25385J37094_100973372	3300002558	Grasslands Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
JGI25617J43924_103243491	3300002914	Grasslands Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0008094_1081011	3300003705	Tropical Rainforest Soil	MDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGEN
Ga0062389_1037445611	3300004092	Bog Forest Soil	MDRLGTWEVPPTSTREQTGNTGRRLNNDPGPEGTLRPSGSASCETRTEGVAWGPEAKQISDRVYVTGSRSTSIVPMTSGNWTHRDPIEERGVP
Ga0066821_10079662	3300005147	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066672_104969531	3300005167	Soil	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066388_1002641453	3300005332	Tropical Forest Soil	MDCLETWEIPLTSTCERTGRSGRRLNNGPGPEVPSDLPGAQVAKYEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYR
Ga0070685_104112081	3300005466	Switchgrass Rhizosphere	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0070699_1020886791	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VKEARDRRFGRGRRAGQRHRMDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPVEESGVP*
Ga0066661_103936411	3300005554	Soil	WEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066700_105194511	3300005559	Soil	WEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0066903_1046681821	3300005764	Tropical Forest Soil	SAGVARAGQRHGMDCLETWEIPLTSACEQTGLSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0081540_10298192	3300005983	Tabebuia Heterophylla Rhizosphere	MDRLGTWEVPFTSTCERTGKSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0070717_116712132	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDRLETWEIPLTSACEQTGGSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0070715_100156273	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0075018_100437681	3300006172	Watersheds	WEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGGRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0074049_128084771	3300006580	Soil	RRGIVGSAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066653_103866492	3300006791	Soil	RGMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066660_113686671	3300006800	Soil	TWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0075434_1026013721	3300006871	Populus Rhizosphere	ETVKEARDRRFGRGRRAGQRHRMDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0075424_1011633461	3300006904	Populus Rhizosphere	MDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0075436_1006457632	3300006914	Populus Rhizosphere	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0081244_15349451	3300006939	Tropical Rainforest Soil	MDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0066793_106494761	3300009029	Prmafrost Soil	MDRLGTWEVPLTSTGEQTGNSGRRLNNDPGPKGPSDLPGAQAQAARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPATSGNRTHRDPIEERGVPCGESR*
Ga0126374_113457392	3300009792	Tropical Forest Soil	MDRLGTWEVPFTSTCEQTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVP
Ga0126380_106798542	3300010043	Tropical Forest Soil	MDRLGTWEVPLTSTCERTGSLGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0134111_102890032	3300010329	Grasslands Soil	MDCLETWEIPLTSACEQTGRSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0134063_105515811	3300010335	Grasslands Soil	MDCLETWEIPLTSACEQPGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIE
Ga0126370_112877232	3300010358	Tropical Forest Soil	TCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHKARRIAWTPEAKQISDRICVAESRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0126376_118528932	3300010359	Tropical Forest Soil	MDRLETWEIPFTSACERTGSSGSRSNNDPGLEGPSDLPGAQTARHEARRSARTSEAKQISDRGCVAGSRSTPIGPVTSGNRTHLDPIEERGV
Ga0126377_128125271	3300010362	Tropical Forest Soil	FGRGRRAGQRHRMDRLGTWEVPLTSTCELTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0126381_1039671361	3300010376	Tropical Forest Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRTCVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGEN
Ga0134127_117809711	3300010399	Terrestrial Soil	TWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0134122_108273151	3300010400	Terrestrial Soil	RHGMDRLGTWEVPFTSTCELTGSLGRRLNNDPGPEGPYDLPGAQVAKHEARRITWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0124844_10618961	3300010868	Tropical Forest Soil	MDRLGTWEVPFTSTCECTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENRWRETR
Ga0124844_11788261	3300010868	Tropical Forest Soil	LETWEIPLTSACEQTGRSGLAGNNDPGPEGPRDLPGAQVARHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENP*
Ga0150983_119997231	3300011120	Forest Soil	MDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0137392_104641041	3300011269	Vadose Zone Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPC
Ga0137365_113249381	3300012201	Vadose Zone Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRICVAGSRSTSIVPVTSGNRTYR
Ga0137363_100573971	3300012202	Vadose Zone Soil	TWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGGRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0137381_112306061	3300012207	Vadose Zone Soil	MDRLETWEVPFTSTCERTGSSGRRLNNDPGPAGPSDRPGAQAARHEARRIAWTPEANQISDRTGVAGSRSTSIVPVTSGNRT
Ga0137376_116653971	3300012208	Vadose Zone Soil	MDRLETWEIPFTSACERTGSSGRRSNNDPGLEGPSDLPGAQTARHEARRSAWTSEAKQISDRGCVAGSRSTPIGPGTSGNRTHWDPVEERGVPCGEN
Ga0137386_108226941	3300012351	Vadose Zone Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGE
Ga0137384_114370571	3300012357	Vadose Zone Soil	MDRLETWEVPFTSTCERTGSSGRRLNNDPGLEDPSDLPGAQVARHETRRIMWTPEAKQISDRTGVAGSRSTSIVPMMSGNWTHRDPMEESGVPCGENR*
Ga0137361_117562751	3300012362	Vadose Zone Soil	MDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0134059_10460351	3300012402	Grasslands Soil	QRHGMDCLETWEIPLTSACEQPGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0164302_110293351	3300012961	Soil	LETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0164309_117874061	3300012984	Soil	EIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0164305_101009611	3300012989	Soil	TWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0173483_105705881	3300015077	Soil	TWEIPLTSACEQTGGSGRRLNNDPGPEGPSALPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0134089_103480131	3300015358	Grasslands Soil	MDCLETWEIPLTSACEQPGRSGRRLNNDPGPEGPSDLPGAQVARHEPRRIAWTPEAKQISDRVCVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGEN
Ga0132256_1023094211	3300015372	Arabidopsis Rhizosphere	MDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPC
Ga0132255_1035718801	3300015374	Arabidopsis Rhizosphere	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSILPVTSGNRTYRDPIEESG
Ga0184617_12129632	3300018066	Groundwater Sediment	MDRLGTWEVPFTSTCEQTGRSGSPVEQLTQPGRLSDLPGAQVARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPRTSGNWTHRDPIEERG
Ga0190269_104729731	3300018465	Soil	SAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0066669_111542142	3300018482	Grasslands Soil	MDRLGTWEVPLTSTCKQTGSSGRRLNNDPGPAGPSDRPGAQAARHEPRRIAWTPEANQISDRTGVAGSRSTSIVPVTSGNRTHQDPIEERG
Ga0210407_101077353	3300020579	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR
Ga0210406_106268381	3300021168	Soil	MDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0213879_101188941	3300021439	Bulk Soil	MDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQIGDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0213878_100113444	3300021444	Bulk Soil	MDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0210402_116851171	3300021478	Soil	WEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQDARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0222729_10135892	3300022507	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0242656_10536231	3300022525	Soil	MDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0242668_11219072	3300022529	Soil	GMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR
Ga0242662_102163042	3300022533	Soil	DCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0242672_10493041	3300022720	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIE
Ga0242665_101919651	3300022724	Soil	RRGIVGSAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0242654_103179922	3300022726	Soil	TSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0207699_108023551	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	FKISAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0207657_111879921	3300025919	Corn Rhizosphere	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPI
Ga0209377_12130971	3300026334	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEES
Ga0257151_10352991	3300026341	Soil	AGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257148_10245881	3300026345	Soil	VARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257178_10397521	3300026446	Soil	WEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257164_10498811	3300026497	Soil	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGE
Ga0257164_10569711	3300026497	Soil	MDRLGTWEVPFTSTCERTGRSGRRLNNSPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0208210_1008211	3300026683	Soil	GQRHRMDRLGTWEVPFTSTCERTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0209074_102359262	3300027787	Agricultural Soil	RRRGIVGSAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0209465_106734611	3300027874	Tropical Forest Soil	LTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETNGIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257175_10833961	3300028673	Soil	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGSSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0307301_101389101	3300028719	Soil	MDRLGTWEVPFTSTCKQTGRSGRRLNNDPGPEGSPTFWERKIARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPATLGNRTHRDPIEERGVP
Ga0075373_114608342	3300030945	Soil	MDRLETWEIPFTSACERTGSSGSRSNNDPGLEGPSDLPGAQTARHEARRSAWTSEAKQISDRGCVAGRRSTPIGPVTS
Ga0075395_100121601	3300030973	Soil	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0265779_1084591	3300031043	Soil	MDRLGTWEVPFTSTCEQTGRSGRRLNNDPGPEDTSDLLGAQAARYEPRRIAWTLEAKQISDRTGVTGSRSTSIVPGTLGNRTHRDPIEERGVPCGESR
Ga0307497_105561761	3300031226	Soil	MDRLGTWEVPHTSTCEHTGRLGRRLNNRPWPGRLSDLLGAHVARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPGTLGN
Ga0170818_1028104592	3300031474	Forest Soil	MDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318516_101203493	3300031543	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318516_106421701	3300031543	Soil	MDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0318534_100585792	3300031544	Soil	MDRLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318541_100446431	3300031545	Soil	ETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318538_100821053	3300031546	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNWTHRDPIEERGVPCGESR
Ga0318571_103101931	3300031549	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEES
Ga0318573_105501451	3300031564	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGV
Ga0318542_102906922	3300031668	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0318500_103654771	3300031724	Soil	MDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNWTYPDPIEESGVPCGENR
Ga0318492_104987481	3300031748	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGV
Ga0318526_101883081	3300031769	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKYEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318521_100524092	3300031770	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318498_105127421	3300031778	Soil	RAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318529_105419291	3300031792	Soil	MDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0318548_106184621	3300031793	Soil	MDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRTRSRKA
Ga0318503_102122361	3300031794	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGN
Ga0318565_101936693	3300031799	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRD
Ga0318499_100332661	3300031832	Soil	RGIVGSAGVARAGQRHRMDRLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318544_100333801	3300031880	Soil	WEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318522_102454781	3300031894	Soil	MDRLGTWEVPFTSTCEQTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDP
Ga0318563_104475241	3300032009	Soil	MDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0318507_103808501	3300032025	Soil	GQRHRMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0318532_102215491	3300032051	Soil	LGTWEVPLTSTCERTGRSGRRLNNGPGPEDPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0318504_102684872	3300032063	Soil	SIDETVKEARDRRFGRGRRAGQRHRMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318514_100545551	3300032066	Soil	MGCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0307471_1001528841	3300032180	Hardwood Forest Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGGRSTSIGPVTSGNRTHRDPTEERGVPCGENR
Ga0306920_1027002941	3300032261	Soil	MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQMSNRICVAGSRSTSIVPVTSGN
Ga0310810_102820512	3300033412	Soil	MDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0373959_0212841_152_514	3300034820	Rhizosphere Soil	ETVKEARIVGSAGVARAGQRHGMDRLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074109

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences