NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F073982

Metagenome / Metatranscriptome Family F073982

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073982
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 51 residues
Representative Sequence VAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDP
Number of Associated Samples 106
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 5.88 %
% of genes near scaffold ends (potentially truncated) 14.17 %
% of genes from short scaffolds (< 2000 bps) 11.67 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (90.833 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(13.333 % of family members)
Environment Ontology (ENVO) Unclassified
(19.167 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.333 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.56%    β-sheet: 15.56%    Coil/Unstructured: 68.89%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF03466LysR_substrate 4.17
PF04392ABC_sub_bind 2.50
PF07883Cupin_2 1.67
PF01757Acyl_transf_3 1.67
PF08388GIIM 1.67
PF13545HTH_Crp_2 1.67
PF06742DUF1214 1.67
PF00293NUDIX 1.67
PF13458Peripla_BP_6 1.67
PF11295DUF3096 0.83
PF00536SAM_1 0.83
PF05163DinB 0.83
PF00211Guanylate_cyc 0.83
PF00872Transposase_mut 0.83
PF00249Myb_DNA-binding 0.83
PF00656Peptidase_C14 0.83
PF08448PAS_4 0.83
PF05990DUF900 0.83
PF07589PEP-CTERM 0.83
PF12704MacB_PCD 0.83
PF13531SBP_bac_11 0.83
PF08345YscJ_FliF_C 0.83
PF03330DPBB_1 0.83
PF07690MFS_1 0.83
PF00083Sugar_tr 0.83
PF04972BON 0.83
PF02371Transposase_20 0.83
PF00027cNMP_binding 0.83
PF01243Putative_PNPOx 0.83
PF01627Hpt 0.83
PF10129OpgC_C 0.83
PF07859Abhydrolase_3 0.83
PF01042Ribonuc_L-PSP 0.83
PF05598DUF772 0.83
PF00571CBS 0.83
PF05239PRC 0.83
PF08028Acyl-CoA_dh_2 0.83
PF13847Methyltransf_31 0.83
PF05368NmrA 0.83
PF13191AAA_16 0.83
PF00072Response_reg 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 2.50
COG1766Flagellar biosynthesis/type III secretory pathway M-ring protein FliF/YscJCell motility [N] 1.67
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 1.67
COG5402Uncharacterized protein, contains DUF1214 domainFunction unknown [S] 1.67
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.83
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.83
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.83
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.83
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.83
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.83
COG3547TransposaseMobilome: prophages, transposons [X] 0.83
COG4249Uncharacterized conserved protein, contains caspase domainGeneral function prediction only [R] 0.83
COG4782Esterase/lipase superfamily enzymeGeneral function prediction only [R] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A90.83 %
All OrganismsrootAll Organisms9.17 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006050|Ga0075028_100932160Not Available536Open in IMG/M
3300006172|Ga0075018_10093007Not Available1326Open in IMG/M
3300006795|Ga0075520_1323420All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.631Open in IMG/M
3300009038|Ga0099829_10132654All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1973Open in IMG/M
3300009520|Ga0116214_1305287Not Available611Open in IMG/M
3300009700|Ga0116217_10042054All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3383Open in IMG/M
3300012930|Ga0137407_10684498All Organisms → cellular organisms → Bacteria → Proteobacteria965Open in IMG/M
3300014838|Ga0182030_11007050Not Available733Open in IMG/M
3300018043|Ga0187887_10444483All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300018043|Ga0187887_10804039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. B2-6-2556Open in IMG/M
3300018061|Ga0184619_10175571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria982Open in IMG/M
3300027660|Ga0209736_1004223All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4754Open in IMG/M
3300027854|Ga0209517_10015988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei7488Open in IMG/M
3300028047|Ga0209526_10565566Not Available733Open in IMG/M
3300030007|Ga0311338_11070558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium776Open in IMG/M
3300031896|Ga0318551_10283626Not Available930Open in IMG/M
3300031910|Ga0306923_10817300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1028Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil13.33%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.50%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil11.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.17%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.17%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost4.17%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.50%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.50%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.83%
Permafrost SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil0.83%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.83%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.83%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.83%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.83%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000546Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300000733Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80EnvironmentalOpen in IMG/M
3300000880Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000912Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3EnvironmentalOpen in IMG/M
3300001081Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3EnvironmentalOpen in IMG/M
3300001083Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1EnvironmentalOpen in IMG/M
3300001178Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3EnvironmentalOpen in IMG/M
3300001383Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012EnvironmentalOpen in IMG/M
3300001407Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012EnvironmentalOpen in IMG/M
3300001410Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012EnvironmentalOpen in IMG/M
3300001428Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300003659Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300004140Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300007819Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011042Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 76 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012882Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025579Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025725Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025774Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4B (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026271Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300027058Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LJNas_102210023300000546Quercus RhizosphereVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPQ
JGI12408J11912_100870913300000733Tropical Forest SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQD
AL20A1W_114027123300000880PermafrostVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPTRTLCRDRWRLLGSH
JGI12032J12867_100384623300000912Forest SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDP*
JGI12662J13196_101816823300001081Forest SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPNRTS
JGI12678J13193_100361123300001083Forest SoilMAFDQSGPRWLGISDLIAEPEGPAFISYKVARSRLNRLRFVTQDP
JGI12646J13576_10385923300001178Forest SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPLRTSAAPDFCDGLSDWRSP
JGI20194J14741_101008113300001383Arctic Peat SoilALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPQRTFRATTIIDSHQ*
JGI20192J14887_100413833300001407Arctic Peat SoilPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPKRT*
JGI20179J14886_101135813300001410Arctic Peat SoilVAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDP
JGI20201J14949_102076913300001428Arctic Peat SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTHDP
JGIcombinedJ26739_10012133943300002245Forest SoilGPRWLGISDLIAEPEGPTFISYKVARRRLDRLRFVTQDPERKFDLAMV*
JGI25385J37094_1013943323300002558Grasslands SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVVRSRLDRLRFVTQDP
JGI25383J37093_1013672013300002560Grasslands SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDP
JGI25612J43240_100177953300002886Grasslands SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDP
JGI25382J43887_1031681023300002908Grasslands SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPTG
JGI25616J43925_1011816023300002917Grasslands SoilVSAALTTVAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPQQTNILPRD*
JGI25404J52841_1010617523300003659Tabebuia Heterophylla RhizosphereVAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPXRALDGEV
Ga0058894_100226913300004140Forest SoilVAFDQSGPRWLGISNLIAEPEGPTFISYKVARSLLNRLRFVTQDPNRT
Ga0066814_1000367013300005162SoilVSAALTTVAFDQSGPRWLGISDLIAEPERPTLISYKVARSRLDWLRFVTQDPKMG*
Ga0066676_1032576123300005186SoilSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPQPTLADR*
Ga0070674_10128718413300005356Miscanthus RhizosphereRPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKAARSRLDRLRFVTQDPQRTYQGFGQ*
Ga0070694_10120080523300005444Corn, Switchgrass And Miscanthus RhizosphereVAFDQSGPRWLGISDLIAEPEGPTFISYKAARSRLDRLRFVTQDPEQTSAAQREQLA*
Ga0066686_1077132513300005446SoilSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPTRK*
Ga0066682_1069565233300005450SoilSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPKRTSP*
Ga0070706_10116588213300005467Corn, Switchgrass And Miscanthus RhizosphereSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPNRTSTSAFTSLVG*
Ga0070706_10164931023300005467Corn, Switchgrass And Miscanthus RhizosphereHRPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISHKVARSRLDQLRFVTQDPDQTSKSGGGI*
Ga0066695_1016712143300005553SoilSGPRWLGISDLIAEPEGPTFISYKVVRSRLDRLRFVTQDPTRTLDHNATVR*
Ga0068858_10240335623300005842Switchgrass RhizosphereVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPERTSRDAWLMPLPSI
Ga0080026_1003969813300005952Permafrost SoilVAFDQSGLRWLGISDLIAEPEGPTFISYKVARGRLDRLRFVTQDPSATSGLISL*
Ga0066789_1039517013300005994SoilVAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVT
Ga0075028_10093216013300006050WatershedsTVAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRS*
Ga0097691_103643613300006055Arctic Peat SoilQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPNQTSAARRSTS*
Ga0097691_104887213300006055Arctic Peat SoilQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDP*
Ga0075018_1009300723300006172WatershedsAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRS*
Ga0075521_1015187323300006642Arctic Peat SoilPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRS*
Ga0075520_115120223300006795Arctic Peat SoilQSGPRWLGISDLIAEPEGPTFISYKVARRRLNRLRFVTQDPEETFASSFL*
Ga0075520_132342023300006795Arctic Peat SoilDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRS*
Ga0075520_142039313300006795Arctic Peat SoilQSGPRWLGISDLIAEPEGPTFISYKVARRRLNRLRFVTQDPQET*
Ga0075433_1086578223300006852Populus RhizosphereVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPELTSRVGDGDRSD*
Ga0104322_11914133300007819Permafrost SoilVAFDQSGPRWLGISDLIAEPEGSTFISYKVARSRLDRLRFVTQDPKRTSTRWSGR*
Ga0066710_10013543813300009012Grasslands SoilLTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRFNRLRS
Ga0099829_1013265433300009038Vadose Zone SoilHRPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRS*
Ga0116214_130528713300009520Peatlands SoilQSGPRWLGISDLIAEPEGPAFISYKVARCRLDRLRS*
Ga0116217_1004205463300009700Peatlands SoilPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPAFIPYKVARCRLDRLRS*
Ga0134111_1048969713300010329Grasslands SoilAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDWLRFVTQDPERTWA*
Ga0126379_1303385913300010366Tropical Forest SoilTTLAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQGPQQT*
Ga0136449_10165484323300010379Peatlands SoilDHRPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNWQRFVTQDPNRKS*
Ga0138586_13535133300011042Peatlands SoilSAALTTVAFDQSGPRWLGISDLIAEPEGPAFISYKVARCRLDRLRS*
Ga0137391_1011067233300011270Vadose Zone SoilTMAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPKRK*
Ga0137389_1019439933300012096Vadose Zone SoilAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPQQTNILPRD*
Ga0137388_1016776733300012189Vadose Zone SoilSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRS*
Ga0137388_1067525023300012189Vadose Zone SoilSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPQQTNILPRD
Ga0137388_1128394423300012189Vadose Zone SoilVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPKRK*
Ga0137388_1187544813300012189Vadose Zone SoilMAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLNRLRLVTQNPDRKFGTSQI*
Ga0137399_1100649813300012203Vadose Zone SoilAALTTVAFDQSGPRWLGISDLIAEPEGPAFISYKVARSRLDRLRFVTQDPFRTSARLRFFFSPVCDTP*
Ga0137368_1058894613300012358Vadose Zone SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVVRSRLDRLRFVTQDPERTSERILAATRVAK
Ga0157304_102648913300012882SoilVTFDHSSLRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPLAACDLLGKAG
Ga0137359_1090653333300012923Vadose Zone SoilWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPTRTFLDVRF*
Ga0137407_1068449813300012930Vadose Zone SoilAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNV*
Ga0137410_1071995313300012944Vadose Zone SoilDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFLSYKVARSRLDRLRFVTQDPQQTNILPRD*
Ga0182024_1007391313300014501PermafrostSPGVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISHKVARRRLDRLRS*
Ga0182024_1022497733300014501PermafrostAFAQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPIRKL*
Ga0182024_1036552513300014501PermafrostQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPTQT*
Ga0182024_1043115713300014501PermafrostDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVTRSRLDRLHFVTQDPLRTSSSFTSPARGGQVVF*
Ga0182024_1266271513300014501PermafrostSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPQRTIGSGLA*
Ga0182030_1100705023300014838BogPDVSAALTTVAFDQSGLRWLGISDLIAEPKGPTFISYKVARSRLYRLRS*
Ga0137412_1016573433300015242Vadose Zone SoilFDQSGPRWLGISDLIAEPEGPTFLSYKVARSRLDRLRFVTQDPQQTNILPRD*
Ga0132255_10550858023300015374Arabidopsis RhizosphereICRDHRPDVSAALTTVAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDP
Ga0187857_1044028523300018026PeatlandVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPTATLPINSAHRRVRR
Ga0187887_1044448323300018043PeatlandHCPDVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRVDRLRS
Ga0187887_1080403913300018043PeatlandSGPRWLGISDLIAEPEGPTFISHKVARSRLDRLRS
Ga0187890_1008355313300018044PeatlandAALTTVAFDQSGPRWLGISDLIAEPEGPTFISHKVARSRLDRLRS
Ga0187858_1044395113300018057PeatlandAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRVDRLRS
Ga0184619_1017557113300018061Groundwater SedimentTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNV
Ga0193731_101324713300020001SoilMAFDQSGLRWLGISDLIAEPEGPTFISYKVARSPLDRLRFVTQDPHLTWARFARQRRFN
Ga0210399_1151192323300020581SoilVAFDQSGPRWLGISNLIAEPEGPTFISYKVARSRLNRLRFVTQDPQQNSLG
Ga0210406_1004988813300021168SoilAFDQSGPRWLGISNLIAEPEGPTFISYKVARSRLNRLRFVTQNPRRTLNFAELWL
Ga0210406_1029448013300021168SoilQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPHRTWSFLYPG
Ga0210400_1047355223300021170SoilDHCPDVSAALTTMAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPKQSSRRSKS
Ga0210387_1097234923300021405SoilSVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPNRKSHRFIHT
Ga0210386_1074805423300021406SoilDVSAALTTVAFDQSGLRWLGISDLIAEPEGPAFISYKVARSRLNRLRFVTQDPERTNEPP
Ga0210410_1030898813300021479SoilVTFDQSGLRWLGISDLIAEPEGPTFISYKVARSLLNRLRFVT
Ga0242663_107335613300022523SoilVAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPRRKW
Ga0242669_107302613300022528SoilMAFDQSGPRWLGISDLIAEPEGPPFISYKVARSSLDRLRFVTQDPKRTYAQMVTLF
Ga0207927_102670213300025579Arctic Peat SoilFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDP
Ga0209638_115367613300025725Arctic Peat SoilFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPERT
Ga0209586_102228933300025774Arctic Peat SoilAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQNP
Ga0209584_1005103813300025878Arctic Peat SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARRRLNRLRFVTQDPTE
Ga0207685_1009936213300025905Corn, Switchgrass And Miscanthus RhizosphereTVAFDQSGPRWLGTSDLIAEPEGPTFISYKVARSRLNRLRFVTQDPNRTSGAVTV
Ga0207693_1029822133300025915Corn, Switchgrass And Miscanthus RhizosphereALTTVAFDQSGPRWLGISNLIAEPEGPTFISYKVARSRLNRLRFVTQDPQRTSSPTRNIPLARGRHR
Ga0207663_1024347623300025916Corn, Switchgrass And Miscanthus RhizosphereVAFDQSGPPWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPLRTSPTPSRMPS
Ga0209880_105603013300026271SoilQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPKRTLVLIRDKKVRG
Ga0209890_1008955113300026291SoilSAALTTMAFDQSGLRWLGISDLIAEPEGPTFISYKVARRRLDRLRFVTQDPRRTSAR
Ga0209236_122085513300026298Grasslands SoilVAFDQSGLRWLGISDLIAEPEGPTFISYKVVRSRLDRLRFVTQDPKQTLSAKK
Ga0209378_117904713300026528SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPLRTWLH
Ga0209160_120185513300026532SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVVRSRLDRLRFVTQDPKR
Ga0209111_102929813300027058Forest SoilMAFDQSGPRWLGISDLIAEPEGPTFISYKVARSLLNRLRFVTQDPNLTS
Ga0208983_103227523300027381Forest SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPSEHG
Ga0209219_110506223300027565Forest SoilMAFDQSGPRWLGISDLIAEPEGPAFISYKVARSRLNRLRFVTQDPTRTLALF
Ga0209220_106568643300027587Forest SoilDVSAALMAFDQSGLRWLGISDLIAEPEGPTFISYKVARRRLDRLRFVTQDPLRKWSV
Ga0209388_114053713300027655Vadose Zone SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPKRTSVP
Ga0209736_100422363300027660Forest SoilMPDVARSVVAFDQSGPRWLGISDLIAEPEGPTFISYKVARS
Ga0208981_110890513300027669Forest SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFV
Ga0209011_108116923300027678Forest SoilAFDQSGPRWLGISDLIAEPEGPTFISYKVARSLSNRLRFVTQDPLRTFLTNAKITS
Ga0208989_1002099733300027738Forest SoilMAFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPIRTFGA
Ga0209517_1001598813300027854Peatlands SoilDQSGPRWLGISDLIAEPEGPAFISYKVARCRLDRLRS
Ga0209777_1077611213300027896Freshwater Lake SedimentVAFDQSGSRWLGISDLIAEPEGPAFISYKVARSRLDRLRFVTQDPDRKSANFDIALT
Ga0209067_1064007213300027898WatershedsAALTTVAFDQSGPRWLGINNLIAEPEGPTFISYEVARSRLDRLRFVTQDPDRTQPIPVPSGRC
Ga0209048_1034124013300027902Freshwater Lake SedimentDVSAALTTVAFDQSGPRWLGISDLIAEPEGPAFISYKVARSRLDRLRS
Ga0209488_1063759623300027903Vadose Zone SoilFDQSGLRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPIRTFGA
Ga0209526_1005706713300028047Forest SoilTVAFDQSGPRWLGISDLIAEPEGPTFISYKVAHSRLDRLRFVTQDPCRTWVF
Ga0209526_1056556613300028047Forest SoilDQSGPRWLGISDLIAEPEGPTFISYKVARRRLDRLRS
Ga0307302_1070858013300028814SoilMAFDQSGLRWLGISDLIAEPEGPTFISYKVARSPLDRLRFVTQDPHLTWALCPATQVQLN
Ga0311338_1107055823300030007PalsaVSAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRS
Ga0170824_10074144513300031231Forest SoilAALTTVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLDRLRFVTQDPLRTCALSRALDPLRW
Ga0307475_1116122723300031754Hardwood Forest SoilVAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRFVTQDPMQTYASSADVGCSV
Ga0318551_1028362613300031896SoilDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRS
Ga0306923_1081730023300031910SoilSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRS
Ga0310916_1047278613300031942SoilAFDQSGPRWLGISDLIAEPEGPTFISYKVARSRLNRLRS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.