Metagenome Family F072776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072776
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	75 residues
Representative Sequence	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENR
Number of Associated Samples	112
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.17 %
% of genes near scaffold ends (potentially truncated)	93.39 %
% of genes from short scaffolds (< 2000 bps)	85.95 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.124 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (38.843 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.281 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.77% Coil/Unstructured: 69.23%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13343	SBP_bac_6	23.97
PF04909	Amidohydro_2	4.96
PF01850	PIN	4.13
PF05977	MFS_3	3.31
PF09084	NMT1	2.48
PF02738	MoCoBD_1	2.48
PF03747	ADP_ribosyl_GH	2.48
PF07690	MFS_1	1.65
PF11954	DUF3471	0.83
PF00857	Isochorismatase	0.83
PF00248	Aldo_ket_red	0.83
PF13414	TPR_11	0.83
PF13551	HTH_29	0.83
PF00005	ABC_tran	0.83
PF11737	DUF3300	0.83
PF00156	Pribosyltran	0.83
PF01042	Ribonuc_L-PSP	0.83
PF00107	ADH_zinc_N	0.83
PF13379	NMT1_2	0.83
PF05593	RHS_repeat	0.83
PF04392	ABC_sub_bind	0.83
PF00343	Phosphorylase	0.83
PF02604	PhdYeFM_antitox	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	3.31
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.48
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	2.48
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.48
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.83
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.83
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.83
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.83
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.78 %
Unclassified	root	N/A	13.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.78 %
Unclassified	root	N/A	13.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.12 %
Unclassified	root	N/A	13.22 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.46 %
Unclassified	root	N/A	13.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.13 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.83 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	55.37 %
Unclassified	root	N/A	13.22 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.13 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	55.37 %
Unclassified	root	N/A	13.22 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	55.37 %
Unclassified	root	N/A	13.22 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.31 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	54.55 %
Unclassified	root	N/A	13.22 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.31 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.83 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101871499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300000787\|JGI11643J11755_11710955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300000787\|JGI11643J11755_11712562	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300000881\|JGI10215J12807_1347111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300002734\|PetF_10064891	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300003993\|Ga0055468_10024899	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300004047\|Ga0055499_10028020	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	799	Open in IMG/M
3300004049\|Ga0055493_10160590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300004480\|Ga0062592_101028668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	755	Open in IMG/M
3300004643\|Ga0062591_102335899	Not Available	559	Open in IMG/M
3300004782\|Ga0062382_10052548	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005293\|Ga0065715_10026284	All Organisms → cellular organisms → Bacteria → Proteobacteria	2902	Open in IMG/M
3300005294\|Ga0065705_10564254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300005295\|Ga0065707_11076731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300005332\|Ga0066388_106412689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300005334\|Ga0068869_100497365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1017	Open in IMG/M
3300005337\|Ga0070682_100042792	All Organisms → cellular organisms → Bacteria → Proteobacteria	2798	Open in IMG/M
3300005347\|Ga0070668_100027739	All Organisms → cellular organisms → Bacteria → Proteobacteria	4298	Open in IMG/M
3300005353\|Ga0070669_101839339	Not Available	528	Open in IMG/M
3300005355\|Ga0070671_100026335	All Organisms → cellular organisms → Bacteria → Proteobacteria	4778	Open in IMG/M
3300005355\|Ga0070671_101918325	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005364\|Ga0070673_100593782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1009	Open in IMG/M
3300005367\|Ga0070667_102137947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300005440\|Ga0070705_100177651	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300005454\|Ga0066687_10718475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300005456\|Ga0070678_101441197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300005467\|Ga0070706_101049266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300005536\|Ga0070697_101307385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300005559\|Ga0066700_11103314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300005561\|Ga0066699_11266108	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300006163\|Ga0070715_10794042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300006854\|Ga0075425_100745497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1124	Open in IMG/M
3300006914\|Ga0075436_100971477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300006914\|Ga0075436_101046079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300009012\|Ga0066710_102081846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300009012\|Ga0066710_103724944	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300009093\|Ga0105240_10766734	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300009102\|Ga0114948_10065736	All Organisms → cellular organisms → Bacteria → Proteobacteria	2301	Open in IMG/M
3300009147\|Ga0114129_10409483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1786	Open in IMG/M
3300009167\|Ga0113563_13575145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300009171\|Ga0105101_10361290	All Organisms → cellular organisms → Eukaryota → Opisthokonta	705	Open in IMG/M
3300009177\|Ga0105248_13410180	Not Available	505	Open in IMG/M
3300009513\|Ga0129285_10384620	All Organisms → cellular organisms → Archaea	633	Open in IMG/M
3300009823\|Ga0105078_1055351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300010043\|Ga0126380_10985511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300010046\|Ga0126384_12341192	Not Available	516	Open in IMG/M
3300010362\|Ga0126377_11358688	Not Available	783	Open in IMG/M
3300010397\|Ga0134124_11811312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300010403\|Ga0134123_11107638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	816	Open in IMG/M
3300011430\|Ga0137423_1034407	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300011436\|Ga0137458_1043219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1192	Open in IMG/M
3300012198\|Ga0137364_10138582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1749	Open in IMG/M
3300012208\|Ga0137376_10014459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5821	Open in IMG/M
3300012208\|Ga0137376_10029666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4327	Open in IMG/M
3300012493\|Ga0157355_1030022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300012685\|Ga0137397_10166424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1636	Open in IMG/M
3300012897\|Ga0157285_10201307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300012918\|Ga0137396_10600135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	814	Open in IMG/M
3300012923\|Ga0137359_10079922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2870	Open in IMG/M
3300012929\|Ga0137404_11420771	Not Available	641	Open in IMG/M
3300012929\|Ga0137404_12248011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300012930\|Ga0137407_10550265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1080	Open in IMG/M
3300012948\|Ga0126375_10844710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300012960\|Ga0164301_11222312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300013306\|Ga0163162_10820829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1046	Open in IMG/M
3300013306\|Ga0163162_12816373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300014296\|Ga0075344_1124118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300014865\|Ga0180078_1012212	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300014968\|Ga0157379_11801858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300015264\|Ga0137403_10030345	All Organisms → cellular organisms → Bacteria → Proteobacteria	5722	Open in IMG/M
3300015372\|Ga0132256_100503606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1322	Open in IMG/M
3300015372\|Ga0132256_100701980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1127	Open in IMG/M
3300017792\|Ga0163161_11944868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300018081\|Ga0184625_10302832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300018433\|Ga0066667_10439028	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1064	Open in IMG/M
3300018476\|Ga0190274_12452391	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300018481\|Ga0190271_10563862	Not Available	1255	Open in IMG/M
3300019377\|Ga0190264_10684785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	753	Open in IMG/M
3300019881\|Ga0193707_1049490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1341	Open in IMG/M
3300019889\|Ga0193743_1019300	All Organisms → cellular organisms → Bacteria → Proteobacteria	3555	Open in IMG/M
3300021082\|Ga0210380_10047769	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300022893\|Ga0247787_1034790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300023261\|Ga0247796_1083367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300024232\|Ga0247664_1123080	Not Available	605	Open in IMG/M
3300025315\|Ga0207697_10003321	All Organisms → cellular organisms → Bacteria → Proteobacteria	8007	Open in IMG/M
3300025901\|Ga0207688_10030165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2989	Open in IMG/M
3300025904\|Ga0207647_10187113	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300025912\|Ga0207707_10063266	All Organisms → cellular organisms → Bacteria → Proteobacteria	3220	Open in IMG/M
3300025915\|Ga0207693_11094847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300025923\|Ga0207681_10298158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1275	Open in IMG/M
3300025927\|Ga0207687_11752594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300025933\|Ga0207706_10122483	All Organisms → cellular organisms → Bacteria	2287	Open in IMG/M
3300025935\|Ga0207709_11436664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300025972\|Ga0207668_11211151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300026025\|Ga0208778_1026638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300027717\|Ga0209998_10194236	Not Available	529	Open in IMG/M
3300027725\|Ga0209178_1020962	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300027765\|Ga0209073_10037197	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300027815\|Ga0209726_10482385	Not Available	560	Open in IMG/M
3300027843\|Ga0209798_10339624	Not Available	713	Open in IMG/M
3300027876\|Ga0209974_10180164	Not Available	774	Open in IMG/M
3300027909\|Ga0209382_11164496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300028536\|Ga0137415_10028092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	5544	Open in IMG/M
3300028807\|Ga0307305_10519684	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300028809\|Ga0247824_10339219	Not Available	855	Open in IMG/M
3300028828\|Ga0307312_10542781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300031455\|Ga0307505_10422736	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031740\|Ga0307468_101666375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300031820\|Ga0307473_11578983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300031824\|Ga0307413_11758796	Not Available	554	Open in IMG/M
3300031908\|Ga0310900_11478539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300031908\|Ga0310900_11768693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300031910\|Ga0306923_10720027	Not Available	1109	Open in IMG/M
3300031962\|Ga0307479_10457669	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1260	Open in IMG/M
3300032132\|Ga0315336_1067834	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300032180\|Ga0307471_100094481	All Organisms → cellular organisms → Bacteria	2688	Open in IMG/M
3300032211\|Ga0310896_10890196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300032828\|Ga0335080_11149084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	783	Open in IMG/M
3300032955\|Ga0335076_11019681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300033475\|Ga0310811_11346445	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300034147\|Ga0364925_0279177	Not Available	624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.90%
Host-Associated	Host-Associated	28.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.68%
Plants	Host-Associated → Plants	27.27%
Aquatic	Environmental → Aquatic	13.22%
Porifera	Host-Associated → Porifera	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Freshwater	Environmental → Aquatic → Freshwater	4.96%
Marine	Environmental → Aquatic → Marine	4.13%
Sediment	Environmental → Aquatic → Sediment	3.31%
Unclassified	Environmental → Aquatic → Unclassified	0.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%
Unclassified	Host-Associated → Porifera → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.44%
Loam	Environmental → Terrestrial → Soil → Loam	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.83%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.31%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.48%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.83%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.83%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Petrosia Ficiformis	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Petrosia Ficiformis	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300002734	Microbial sample from Petrosia ficiformis	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009102	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009513	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - F-1Y	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014296	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018714991	3300000364	Soil	MYIDCDSHYFPVKFLEGVSAKYSHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDVHVLIPENRELLYT
JGI11643J11755_117109552	3300000787	Soil	MYIDCDSHYFPVKFLEGISAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
JGI11643J11755_117125625	3300000787	Soil	MYIDCDSHYFPVKFLEPVSAKFPHSPRVVRKGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
JGI10215J12807_13471112	3300000881	Soil	MYIDCDSHYFPVKFLEGISAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVL
PetF_100648912	3300002734	Petrosia Ficiformis	MYIDCDTHYFPVKFLEGISDQYPDSPRVVRKGDEVKSVLPDGTLIKNQAPKGRWDLDVRVAQADFEGFDKHVLIPENRELLY
Ga0055468_100248992	3300003993	Natural And Restored Wetlands	MYIDCDSHYFPVKFLEQVSAKYSHSPRVVRKGDDVRSVLPDGTLIKNQAPKGRWHLDT
Ga0055499_100280201	3300004047	Natural And Restored Wetlands	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHV
Ga0055493_101605901	3300004049	Natural And Restored Wetlands	MYIDCDSHYFPVRFLEGVSAKYPNSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFNIHVLIPENRELLYTWDRDLGC
Ga0062592_1010286681	3300004480	Soil	MYIDCDSHYFPVKFLEGISAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWE
Ga0062591_1023358992	3300004643	Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVD
Ga0062382_100525482	3300004782	Wetland Sediment	MYIDCDSHYFPVKFLEGISAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIHVLIPENRELLYTWDRD
Ga0065715_100262843	3300005293	Miscanthus Rhizosphere	MYIDCDSHYFPVKFLKGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPEN
Ga0065705_105642541	3300005294	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEG
Ga0065707_110767312	3300005295	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTW
Ga0066388_1064126891	3300005332	Tropical Forest Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDIHVLIPEN
Ga0068869_1004973651	3300005334	Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPNSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPEN
Ga0070682_1000427923	3300005337	Corn Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEVFDVHVLIPEN
Ga0070668_1000277396	3300005347	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRD
Ga0070669_1018393391	3300005353	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLD
Ga0070671_1000263351	3300005355	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVD
Ga0070671_1019183251	3300005355	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRV
Ga0070673_1005937822	3300005364	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPNSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDL
Ga0070667_1021379472	3300005367	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVL
Ga0070705_1001776512	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDCDSHYFPVKFLKGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVL
Ga0066687_107184751	3300005454	Soil	MYIDCDSHYFPVKFLEEVSAKYRHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDGLRAGASLQ*
Ga0070678_1014411971	3300005456	Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLY
Ga0070706_1010492661	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYSYSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDVHVLIPENRELLYTW
Ga0070697_1013073851	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDCDSHYFPVKFLKGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTW
Ga0066700_111033141	3300005559	Soil	MYIDCDSHYFPVKFLEAVSAKYPPSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDAHVLIPENRELLYTWDRDLGGELAR
Ga0066699_112661081	3300005561	Soil	MYIDCDSHYFPVKFLEEVSARYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRRHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRD
Ga0070715_107940421	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPE
Ga0075425_1007454971	3300006854	Populus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDLG
Ga0075436_1009714771	3300006914	Populus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDEVKSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRD
Ga0075436_1010460791	3300006914	Populus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLY
Ga0066710_1020818462	3300009012	Grasslands Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLLDGTLIKNQAPKGRWHLDTRD
Ga0066710_1037249443	3300009012	Grasslands Soil	MYIDCDSHYFPVKFLEEVSAKYRHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRRHLDTRDQHVD
Ga0105240_107667341	3300009093	Corn Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQH
Ga0114948_100657361	3300009102	Deep Subsurface	MYIDCDTHYFPVTFLEGVSAKYLHSPKVVRNGDEVKSVLPDGTLIQNQAPKGRWHLDTRVQHVE
Ga0114129_104094833	3300009147	Populus Rhizosphere	MYIDCDSHYFPVKFLEGVSVKYPHSPRVVKNGDDVRSVLPDGRLIKNQAPKGRWHLDT
Ga0113563_135751452	3300009167	Freshwater Wetlands	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIHVLIPENRELL
Ga0105101_103612903	3300009171	Freshwater Sediment	MYIDCDSHYFPVKFLEGVCAKFPQSPRVVRNVDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIHV
Ga0105248_134101801	3300009177	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWE
Ga0129285_103846201	3300009513	Beach Aquifer Porewater	MVVQDETIGGALMYIDCDTHYFPVKFLEGISDQYPDSPRVVRNGDEVKSVLPDGTLIKNQAPKGRWDLDTRVQQADFEGFDKHVLIPENRE
Ga0105078_10553511	3300009823	Groundwater Sand	MYIDCDSHYFPVKFLEGVSAKYSHSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDIHVLIPENRELLYTWD
Ga0126380_109855111	3300010043	Tropical Forest Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIHVLIPENRELLYTWDRD
Ga0126384_123411921	3300010046	Tropical Forest Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDDTLIKNQAPKGRWHLDTRD
Ga0126377_113586881	3300010362	Tropical Forest Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPGGTLIKNQAPKGRWHLDTRD
Ga0134124_118113122	3300010397	Terrestrial Soil	MYIDCDSHYFPVKFLEGVSAKYPNSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPE
Ga0134123_111076382	3300010403	Terrestrial Soil	MYIDCDSHYFPVKFLEGVSAKYPNSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
Ga0137423_10344072	3300011430	Soil	MYIDCDSHYFPVKFLEGVGDKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDAHVLI
Ga0137458_10432192	3300011436	Soil	MYIDCDSHYFPVKFLEGVSAKYPNSPRVTRKGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQH
Ga0137364_101385824	3300012198	Vadose Zone Soil	MYIDCDSHYFPVKFLEEVSARYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVD*
Ga0137376_100144592	3300012208	Vadose Zone Soil	MYIDCDSHYFPVKFLEEVSARYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRRHLDTRDQHVD*
Ga0137376_100296661	3300012208	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYSHSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDVHVLIPENRELLYT*
Ga0157355_10300221	3300012493	Unplanted Soil	MYIDCDSHYFPVKFLEGVSAKYARSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVD
Ga0137397_101664242	3300012685	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYSQPPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDIHVLI
Ga0157285_102013071	3300012897	Soil	MYIDCDSHYFPVKFLEPVSAKFPHSPRVVRKGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDL
Ga0137396_106001351	3300012918	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
Ga0137359_100799221	3300012923	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGF
Ga0137404_114207712	3300012929	Vadose Zone Soil	MYIDCDSHYFPLKFLEGVSAKYPHSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRD
Ga0137404_122480112	3300012929	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDAHVLIPENRE
Ga0137407_105502652	3300012930	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRKGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENR*
Ga0126375_108447102	3300012948	Tropical Forest Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDIHVLIPENRELLYTWD
Ga0164301_112223121	3300012960	Soil	MYIDCDSHYFPVKFLEGVSAKYSHSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHMDWEGFDVHVLIPENRELLYTW
Ga0163162_108208292	3300013306	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHV
Ga0163162_128163731	3300013306	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHV
Ga0075344_11241181	3300014296	Natural And Restored Wetlands	MYIDCDSHYFPVRFLEGVSAKYPNSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFNIHVLIPENRELLYTWDRDLGCALARAYNAQVQGDVAGTVKYAE
Ga0180078_10122121	3300014865	Soil	MEGRIMYIDCDSHYFPVKFLEGVGDKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDAHVLIPENRELLYTWDPD
Ga0157379_118018581	3300014968	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVL
Ga0137403_100303456	3300015264	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDAHVLIPENRELLYTWDRDLGGELAQAYND
Ga0132256_1005036062	3300015372	Arabidopsis Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDREL
Ga0132256_1007019802	3300015372	Arabidopsis Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYCHSPRVVRNGDDVRSVLPDGTLIKNLAPKGRWDLDTRDQHVDWEGFDVHVLIPENRELLYTWD
Ga0163161_119448681	3300017792	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENREL
Ga0184625_103028322	3300018081	Groundwater Sediment	MYIDCDSHYFPVKFLEGVSAKYSHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDVHVLIPENRELL
Ga0066667_104390282	3300018433	Grasslands Soil	MYIDCDSHYFPVKFLEEVSARYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRRHLDTRDQHVDWEGFDVHVLIPENRELLYTWGRDLRCALARAAYDSEG
Ga0190274_124523912	3300018476	Soil	MYIDCDSHYFPVKFLEGVCAKFPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLD
Ga0190271_105638622	3300018481	Soil	MYIDCDSHYFPVKFLEGVCAKFPHAPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWE
Ga0190264_106847851	3300019377	Soil	MYIDCDSHYFPVKFLEPVSVKYPHSPRVVRKGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHV
Ga0193707_10494902	3300019881	Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPEN
Ga0193743_10193004	3300019889	Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDR
Ga0210380_100477693	3300021082	Groundwater Sediment	MYIDCDSHYFPVKFLAEVCAKFPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIH
Ga0247787_10347902	3300022893	Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDMHVLIPEN
Ga0247796_10833671	3300023261	Soil	MYIDCDSHYFPVKFLKGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGF
Ga0247664_11230802	3300024232	Soil	MYIDCDSHYFPVRFLEGVSDRYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRD
Ga0207697_100033211	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
Ga0207688_100301651	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFD
Ga0207647_101871133	3300025904	Corn Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDLGGELAR
Ga0207707_100632664	3300025912	Corn Rhizosphere	MYIDCDSHYFPVKFLKGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLD
Ga0207693_110948471	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENR
Ga0207681_102981581	3300025923	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQH
Ga0207687_117525941	3300025927	Miscanthus Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDSDL
Ga0207706_101224831	3300025933	Corn Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGF
Ga0207709_114366641	3300025935	Miscanthus Rhizosphere	MYIDCDSHYFPVKFLKGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDLGGEPGRVTDGDPGCFGQ
Ga0207668_112111511	3300025972	Switchgrass Rhizosphere	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEG
Ga0208778_10266381	3300026025	Rice Paddy Soil	MYIDCDSHYFPVKFLEGLSTKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIHVLIPENRELLYTWDRDLGCAL
Ga0209998_101942361	3300027717	Arabidopsis Thaliana Rhizosphere	MYIDCDSHYFPVKFLEPVSAKFPHSPRVVRKGDDVRSVLPDGTLIKNQAPKGRWHLDTRD
Ga0209178_10209621	3300027725	Agricultural Soil	MYIDCDSHYFPVQFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWE
Ga0209073_100371973	3300027765	Agricultural Soil	MYIDCDSHYFPVQFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHV
Ga0209726_104823851	3300027815	Groundwater	MYIDCDSHYFPVKFLEAVSAKYPHSPRVVRQGDEVRSVLPDGTLIKNQAPKGRWHLDTRDQHVD
Ga0209798_103396241	3300027843	Wetland Sediment	MYIDCDSHYFPVKFLEGISDKYPHSPRVVRKGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWE
Ga0209974_101801641	3300027876	Arabidopsis Thaliana Rhizosphere	MYIDCDSHYFPVKFLEPVSAKYPHSPRVVRTDDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVEWEGFDVHVLIPENREGHVPDDRLARHG
Ga0209382_111644961	3300027909	Populus Rhizosphere	MYIDCDSHYFPVKFLEGISAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDL
Ga0137415_100280921	3300028536	Vadose Zone Soil	MYIDCDSHYFPVKFLEGVSAKYSHSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHVDWEGFDVHV
Ga0307305_105196842	3300028807	Soil	MYIDRDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDLGG
Ga0247824_103392191	3300028809	Soil	MYIDCDSHYFPVKFLEPVSAKYRHSPRVVRQGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGF
Ga0307312_105427811	3300028828	Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVL
Ga0307505_104227362	3300031455	Soil	MYIDCDSHYFPVKFLEGVSAKYPNSPRVTRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
Ga0307468_1016663751	3300031740	Hardwood Forest Soil	MYIDCDSHYFPVKFLEGVSAKYARSPRVVKNGDDVRSVLPDGTLIKNQAPKGRWHLDT
Ga0307473_115789831	3300031820	Hardwood Forest Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDEVKSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYTWDRDLGCVLARDYNDAVAQDLKD
Ga0307413_117587961	3300031824	Rhizosphere	MYIDCDSHYFPVKFLEPVSAKYRHSPRVVRQGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEG
Ga0310900_114785391	3300031908	Soil	MYIDCDSHYFPVKFLEGVSAKYAHSPRVVKNGDDVRSVLPDGRLIKNQAPKGRWHLDTRDQHVDWEGFDV
Ga0310900_117686931	3300031908	Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
Ga0306923_107200271	3300031910	Soil	MYIDCDSHYFPVKFLEGVSAKYPHSPRVIRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDHHV
Ga0307479_104576691	3300031962	Hardwood Forest Soil	MIYIDCDSHYFPVKFLEGVSAKYPHSPRVVKNGDEVKSVLPDGTLIKNQAPKGRWHLDTRDQHV
Ga0315336_10678341	3300032132	Seawater	MYIDCDTHYFPVKFLEGISEEFPHSPRVVREGDEVKSVLPDGTLIKDQAPKGRWHLDTRVQQADFEGFDKHVLIPENRELLYTWDRDLGNELARR
Ga0307471_1000944811	3300032180	Hardwood Forest Soil	MYIDCDSHYFPVKFLDGVSAKYPHSPRVVKNGDEVKSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDVHVLIPENRELLYT
Ga0310896_108901961	3300032211	Soil	MYIDCDSHYFPVKFLEGVSAKYPNSPRVMRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIHVLIPENRELLYTWDRDLGCE
Ga0335080_111490841	3300032828	Soil	MYIDCDSHYFPVRFLEGVSAKYPHSPRVVRNGDEVKSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGF
Ga0335076_110196812	3300032955	Soil	MYIDCDSHYFPVRFLEGVSAKYPHSPRVVRNGDEVKSVLPDGTLIKNQAPKGRWHLDTRDQHVDWEGFDIHV
Ga0310811_113464451	3300033475	Soil	MYIDCDSHYFPVQFLEGVSAKYPHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTRDQHVDW
Ga0364925_0279177_446_622	3300034147	Sediment	MYIDCDSHYFPVKFLEGVSAKYSHSPRVVRNGDDVRSVLPDGTLIKNQAPKGRWHLDTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences