Metagenome Family F072758

Basic Information
Family ID	F072758
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	63 residues
Representative Sequence	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Number of Associated Samples	70
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.50 %
% of genes near scaffold ends (potentially truncated)	28.93 %
% of genes from short scaffolds (< 2000 bps)	68.60 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (63.636 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater (38.017 % of family members)
Environment Ontology (ENVO)	Unclassified (84.298 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (80.992 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88. 1GS310G0146KB_00273590 2LPaug09P16500mDRAFT_10004202 3LPaug09P16500mDRAFT_10011056 4LPaug09P16500mDRAFT_10303732 5LP_A_09_P04_500DRAFT_10203871 6NpDRAFT_102338522 7GBIDBA_1000187419 8JGI25131J35506_100012519 9JGI24926J35533_1047222 10JGI24926J35532_1047222 11JGI24925J35515_10017763 12FS896DNA_100910553 13FS896DNA_105811684 14Ga0063391_10054483 15Ga0066857_101854843 16Ga0066855_100782581 17Ga0066855_101209983 18Ga0066837_101018912 19Ga0066853_102413932 20Ga0066373_100000788 21Ga0066373_100480942 22Ga0066373_101511723 23Ga0081761_12196652 24Ga0075441_100758642 25Ga0066372_101207461 26Ga0066372_107848542 27Ga0105020_10519882 28Ga0102910_10951701 29Ga0115652_100036462 30Ga0115663_10467493 31Ga0102885_11400372 32Ga0118722_13295761 33Ga0098059_11506304 34Ga0098059_11845861 35Ga0098059_11959383 36Ga0181432_11371123 37Ga0211655_10021338 38Ga0211657_10617792 39Ga0211662_10417962 40Ga0211660_102030443 41Ga0211656_100365822 42Ga0211646_102913232 43Ga0211646_103202902 44Ga0211646_103737681 45Ga0211680_100122603 46Ga0211680_100648363 47Ga0211680_102137842 48Ga0211623_100194083 49Ga0211575_1000007644 50Ga0206686_100074512 51Ga0206686_10674042 52Ga0206686_11585792 53Ga0206684_10245252 54Ga0206684_10813952 55Ga0206684_12595882 56Ga0206684_12785751 57Ga0206684_12812101 58Ga0206678_1000514910 59Ga0206678_100097041 60Ga0206678_100122031 61Ga0206678_100332261 62Ga0206678_100412392 63Ga0206678_101284823 64Ga0206678_105524801 65Ga0206683_1000496515 66Ga0206683_100125577 67Ga0206683_100510571 68Ga0206679_102662161 69Ga0206679_105452132 70Ga0206679_106631562 71Ga0206682_101760973 72Ga0206680_1000178310 73Ga0206680_100769391 74Ga0206680_103022152 75Ga0206680_103153343 76Ga0206681_100157298 77Ga0206681_101574422 78Ga0206681_103047432 79Ga0244776_104896972 80Ga0209644_100014321 81Ga0208750_10000443 82Ga0208131_10282174 83Ga0208965_10455743 84Ga0208950_10754133 85Ga0208947_10097343 86Ga0209019_10520572 87Ga0257108_10013183 88Ga0257108_10033097 89Ga0257108_10193731 90Ga0257108_10442782 91Ga0257108_10587092 92Ga0257108_11994431 93Ga0257107_100003126 94Ga0257107_10046677 95Ga0257107_10231184 96Ga0257107_11387241 97Ga0257107_12197202 98Ga0257109_10792494 99Ga0257109_11214161 100Ga0257109_12346342 101Ga0257112_100403053 102Ga0257111_10057287 103Ga0302119_1000227616 104Ga0315328_105367402 105Ga0315322_101209791 106Ga0315326_107795332 107Ga0315320_103502413 108Ga0315319_100349542 109Ga0315319_100996011 110Ga0315318_105913481 111Ga0315324_100118051 112Ga0315324_102548111 113Ga0315329_100450061 114Ga0315321_100486966 115Ga0315321_108357411 116Ga0315333_101660092 117Ga0315334_106130322 118Ga0315334_106619411 119Ga0315334_112992703 120Ga0315334_113664181 121Ga0372840_194097_400_594
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88. 1GS310G0146KB_00273590 2LPaug09P16500mDRAFT_10011056 3LPaug09P16500mDRAFT_10303732 4GBIDBA_1000187419 5JGI24926J35533_1047222 6FS896DNA_105811684 7Ga0066853_102413932 8Ga0081761_12196652 9Ga0066372_101207461 10Ga0105020_10519882 11Ga0118722_13295761 12Ga0211575_1000007644 13Ga0206684_10813952 14Ga0206684_12812101 15Ga0206678_1000514910 16Ga0257107_10231184 17Ga0315319_100996011 18Ga0315324_102548111
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1Ga0315321_100486966 2LPaug09P16500mDRAFT_10011056 3LPaug09P16500mDRAFT_10303732 4JGI25131J35506_100012519 5Ga0063391_10054483 6Ga0066373_100480942 7Ga0081761_12196652 8Ga0105020_10519882 9Ga0181432_11371123 10Ga0211657_10617792 11Ga0211646_103737681 12Ga0211680_100122603 13Ga0211680_100648363 14Ga0206686_100074512 15Ga0206686_11585792 16Ga0206684_10245252 17Ga0206684_12785751 18Ga0206684_12812101 19Ga0206678_101284823 20Ga0206679_106631562 21Ga0206681_101574422 22Ga0208131_10282174 23Ga0208965_10455743 24Ga0257108_11994431 25Ga0257107_10231184 26Ga0302119_1000227616 27Ga0315333_101660092 28Ga0315334_106619411 29Ga0372840_194097_400_594
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF11056	UvsY	13.22
PF01503	PRA-PH	10.74
PF01106	NifU	6.61
PF04851	ResIII	4.96
PF10902	WYL_2	4.13
PF04820	Trp_halogenase	3.31
PF00011	HSP20	2.48
PF00303	Thymidylat_synt	1.65
PF03796	DnaB_C	1.65
PF07068	Gp23	1.65

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	6.61
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	2.48
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	1.65
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.65
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	1.65
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.83
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.83
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	0.83
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1784	TctA family transporter	General function prediction only [R]	0.83

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	36.36 %
Unclassified	root	N/A	63.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	23.97 %
Unclassified	root	N/A	63.64 %
Viruses	superkingdom	All Organisms → Viruses	12.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.97 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Unclassified	root	N/A	63.64 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	9.92 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Unclassified	root	N/A	63.64 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	9.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Unclassified	root	N/A	63.64 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9.92 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Unclassified	root	N/A	63.64 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	9.92 %
Unclassified	root	N/A	63.64 %

Name	Rank	Taxonomy	Distribution
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	9.92 %
Unclassified	root	N/A	63.64 %

Name	Rank	Taxonomy	Distribution
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Unclassified	root	N/A	63.64 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	9.92 %

Name	Rank	Taxonomy	Distribution
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.92 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	9.92 %
Unclassified	root	N/A	63.64 %

Scaffold	Taxonomy	Length	IMG/M Link
2189573025\|GS310G0146KB_1113171786252	Not Available	935	Open in IMG/M
3300000142\|LPaug09P16500mDRAFT_c1000420	Not Available	12185	Open in IMG/M
3300000142\|LPaug09P16500mDRAFT_c1001105	Not Available	7372	Open in IMG/M
3300000142\|LPaug09P16500mDRAFT_c1030373	Not Available	846	Open in IMG/M
3300000264\|LP_A_09_P04_500DRAFT_1020387	Not Available	863	Open in IMG/M
3300000929\|NpDRAFT_10233852	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	611	Open in IMG/M
3300001683\|GBIDBA_10001874	Not Available	29418	Open in IMG/M
3300002511\|JGI25131J35506_1000125	All Organisms → Viruses	21288	Open in IMG/M
3300002525\|JGI24926J35533_104722	Not Available	854	Open in IMG/M
3300002527\|JGI24926J35532_104722	Not Available	854	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	3.31%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	3.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	46.28%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.83%
Oceanic	Environmental → Aquatic → Marine → Oceanic	33.88%
Strait	Environmental → Aquatic → Marine → Strait	0.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.57%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	4.13%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	2.48%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.31%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	42.98%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	29.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.57%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	1.65%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.48%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.83%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.83%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	15.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	13.22%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	11.57%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	4.13%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.31%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.83%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	38.02%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.83%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.83%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573025	Marine microbial communities from Columbia River, CM, sample from Newport Hydroline, GS310-FOS-0p8-Hyp-75m	Environmental	Open in IMG/M
3300000142	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500m	Environmental	Open in IMG/M
3300000264	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_500	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002525	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_80	Environmental	Open in IMG/M
3300002527	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_80	Environmental	Open in IMG/M
3300002533	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_80	Environmental	Open in IMG/M
3300003540	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 70 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS310G0146KB_00273590	2189573025	Marine Estuarine	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLSEDEFKEITTRFLESRDDIQL
LPaug09P16500mDRAFT_10004202	3300000142	Marine	MEELYREFEQLSMKGEPLTSAGIMMAQAMKIYKAMLPEAEFKEITTRFLESRDDIPTIKPPTLN*
LPaug09P16500mDRAFT_10011056	3300000142	Marine	MDELYEKFEKLAISNEPLMAAGIMMAQAMKIYKAMLSADEFKLMTEHILESRDMIQTPDIPKLH*
LPaug09P16500mDRAFT_10303732	3300000142	Marine	MDELYEEFEKLTMKHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTNHILESRDDMLSVDKPTLQ*
LP_A_09_P04_500DRAFT_10203871	3300000264	Marine	MEELYREFEQLSMKGEPLTSAGIMMAQAMKIYKAMLPEAEFKEITTRFLESR
NpDRAFT_102338522	3300000929	Freshwater And Marine	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLSEDEFKEITTRFLESRDDIPTIKPPTLN*
GBIDBA_1000187419	3300001683	Hydrothermal Vent Plume	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKAALSEEEFKRVTEHILESRDNILEVEKPTLN*
JGI25131J35506_100012519	3300002511	Marine	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALSKEEFKRITEHILESRDNILEVEKPTLN*
JGI24926J35533_1047222	3300002525	Marine	MEELYREFEQLASKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDIQMPDKPTLN*
JGI24926J35532_1047222	3300002527	Marine	MEELYREFEQLASKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDIQMPDKPTLN
JGI24925J35515_10017763	3300002533	Marine	MEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINVERPTLN*
FS896DNA_100910553	3300003540	Diffuse Hydrothermal Flow Volcanic Vent	MEKLYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLPEDEFKEITTRFLESRDDIPTIKPPTLN*
FS896DNA_105811684	3300003540	Diffuse Hydrothermal Flow Volcanic Vent	MKHEPLMAAGIMMAQAMKIYIAVLSEEEYKMITEHILDTRNDIISLEKPTIN*
Ga0063391_10054483	3300003937	Marine	MDELYEEYEKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKLMTEHILKSRDDIPTSEIPKVH*
Ga0066857_101854843	3300005401	Marine	IMEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINIERPTLN*
Ga0066855_100782581	3300005402	Marine	MEKLYREFEKLSMKHDPLASAGIMMAQALKIYKAVLPEEEFKMVTEHILDSRDNIISLEKPTIN*
Ga0066855_101209983	3300005402	Marine	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLPEDEFKEITARFLESRNDIPTIKPPTLN*
Ga0066837_101018912	3300005593	Marine	MEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINIERPTLN*
Ga0066853_102413932	3300005603	Marine	MEELYREFEQLSMKEEPLTSAGIMMAQAMKIYKAMLSEDEFKIMAKHILDEENILPIDKPTLNG*
Ga0066373_100000788	3300006011	Marine	MDELYEKYEKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKVMTEHILKSRDDIPTSEIPKVH*
Ga0066373_100480942	3300006011	Marine	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSPDEFKLMTEHILESRDSILEVEKPTLQ*
Ga0066373_101511723	3300006011	Marine	MDELYEKFEKLAINNEPLMAAGIMMAQAMKIYKAMLSEDEFKLMTEHILKSRDDILTPDIPKIH*
Ga0081761_12196652	3300006082	Diffuse Hydrothermal Flow Volcanic Vent	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLPEDEFKEITARFLESRNDIPTIKPPTVN*
Ga0075441_100758642	3300006164	Marine	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALSKEEFNRITEHILESRGNILEVEKPTLN*
Ga0066372_101207461	3300006902	Marine	MDNNLEQLYREFEKLSMKHEPLASAGIMMAQALKIYKAMLSEEEFLMITERILESRDDIKELEKPT
Ga0066372_107848542	3300006902	Marine	EKLYREFEKLSMKHDPLASAGIMMAQALKIYKAILSKEEYDMMTEHILESRDDIVQLEKPTLN*
Ga0105020_10519882	3300007514	Marine	MEKLYREFEKLSMQHEPLASAGVMMAQALKIYKAMLSEEEYKMITEHILTTRDDILPLDKPTLN*
Ga0102910_10951701	3300007667	Estuarine	YRKFEKLSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRDNILEVERPTLN
Ga0115652_100036462	3300008624	Marine	MEKLYREFEKLSMKHDPLASAGIMMAQALKIYKAILSKEEYDMMTEHILESRDDIVQLEKPTLN*
Ga0115663_10467493	3300008740	Marine	MDELYEKYEKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKVMTEHILKSRDDILTPEIPKVH*
Ga0102885_11400372	3300009142	Estuarine	MEELYREFEQLSMKGEPLTSAGIMMAQAMKIYKAMLSEDEFKEITKLFLESRDDIPTIKPPTLN*
Ga0118722_13295761	3300009376	Marine	MEKLYREFEKLSMKHDPLASAGIMMAQALKIYKAILSKEEYDMMTEHILE
Ga0098059_11506304	3300010153	Marine	SMEHEPLTSAGIMMAQTLTIYKTALSEEEFKRITEHILESRDNILEVEKPTLN*
Ga0098059_11845861	3300010153	Marine	MEELYREFEQLTAKNEPLQCAGIMMAQALTIYKAALSEDEFKMMTSKILESRDDINVESPTIN*
Ga0098059_11959383	3300010153	Marine	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALSEEEFKRITQHILESRDNILEVEK
Ga0181432_11371123	3300017775	Seawater	MDELYEEFEKLTRNHEPFMAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Ga0211655_10021338	3300020243	Marine	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Ga0211657_10617792	3300020298	Marine	MDNNLEQLYREFEKLSMKHEPLASAGIMMAQALKIYKAMLSEEEFLMITERILESRDDIKELEKPTLN
Ga0211662_10417962	3300020300	Marine	MDELYEEYEKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKLMTEHILKSRDDIPTSEIPKVH
Ga0211660_102030443	3300020373	Marine	MEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINIERPTLN
Ga0211656_100365822	3300020375	Marine	MEELYREFEQLSMKEEPLTSAGIMMAQAMKIYKAMLSEDEFKIMAKHILDEENILPIDKPTLNG
Ga0211646_102913232	3300020383	Marine	MEELYKEFEQLTAKNEPLQCAGIMMAQALTIYKAALSEDEFKMMTSKILESRDDINVESPTIN
Ga0211646_103202902	3300020383	Marine	MEELYREFEQLSMKEEPLTSAGIMMAQAMKIYKAMLSEDEFKIMAKHILDEENILPIDKPTLNGXEINRXG
Ga0211646_103737681	3300020383	Marine	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILKSRDDILTPDIPKIH
Ga0211680_100122603	3300020389	Marine	MEELVYREFEKLSMKHEPLTSAGIMMAQAIKIYKAMLSEEEFKTITGHILESRDNVLSLEKPTLN
Ga0211680_100648363	3300020389	Marine	MDKLYREFEKLTMKHEPLMAAGIMMAQAMKIYKAVLSEEEYKMITEHILDSRNDIISLEKPTIN
Ga0211680_102137842	3300020389	Marine	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDDILEVEKPTLQ
Ga0211623_100194083	3300020399	Marine	MTFEELNEEFEKLAINHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Ga0211575_1000007644	3300020407	Marine	MQTYLQEKIKMDNNLEQLYRDFERLSMQHEPLASAGVMMAQALKIYKAMLSEEEFLMVTEHILESRDEITIERPTLN
Ga0206686_100074512	3300021065	Seawater	MDELYEEFEKLAINHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDLFETPDIPKLH
Ga0206686_10674042	3300021065	Seawater	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSPDEFKLMTEHILESRDSILEVEKPTLQ
Ga0206686_11585792	3300021065	Seawater	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLSKDEFKIMAKHILDEENILPIDKPTLNG
Ga0206684_10245252	3300021068	Seawater	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLSEDEFKEITTRFLESRDDIPTIKPPTLN
Ga0206684_10813952	3300021068	Seawater	MDTKCKRIIRKGEKIMEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINVERPTLN
Ga0206684_12595882	3300021068	Seawater	MDTKRKRIIRKGEKIMEELYREFEQLTAKNEPLQCAGIMMAQALTIYKAALSEDEFKMMTSKILESRDDINVERPTLN
Ga0206684_12785751	3300021068	Seawater	KGEKIMEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDIQMPDKPTLN
Ga0206684_12812101	3300021068	Seawater	VDKLYREFEKLSVQGEPLTVAGIMMAQAMKIYKVMLDEEEFKKLTEHILESRDDINIEVDKPTLQ
Ga0206678_1000514910	3300021084	Seawater	MTFEQLNKEFEKLAINHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTIN
Ga0206678_100097041	3300021084	Seawater	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILES
Ga0206678_100122031	3300021084	Seawater	MEELYREFEQLAAKNEPLQCAGIMMAQALKIYKVALSEDEFKMITSKILESRDDINIERP
Ga0206678_100332261	3300021084	Seawater	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRDNILEVERPTLN
Ga0206678_100412392	3300021084	Seawater	MEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINVERPTLN
Ga0206678_101284823	3300021084	Seawater	MEELYREFEQLTAKNEPLQCAGIMMAQALTIYKAALSEDEFKMMTSKILESRDDINVERPTLN
Ga0206678_105524801	3300021084	Seawater	VDKLYREFEKLSVQGEPLTVAGIMMAQAMKIYKVMLDEEEFKKLTEHILESRDNINIEVDKPTLQ
Ga0206683_1000496515	3300021087	Seawater	MEELYREFEQLASKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDD
Ga0206683_100125577	3300021087	Seawater	MEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDIQMPDKPTLN
Ga0206683_100510571	3300021087	Seawater	MEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRDNILEVERPTLN
Ga0206679_102662161	3300021089	Seawater	MEELYREFEQLASKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDIQMPDK
Ga0206679_105452132	3300021089	Seawater	MEELYREFEQLTAKNEPLQCAGIMMAQALTIYKAALSEDEFKMMTSKILESRDDINVERPTL
Ga0206679_106631562	3300021089	Seawater	MDNNLEQLYRDFERLSMQHEPLASAGIMMAQALKIYKAILSEEEYDMMTEHILESRDDIVQLEKPTLN
Ga0206682_101760973	3300021185	Seawater	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALSEEEFKRITEHILESRDNILEVERPTLN
Ga0206680_1000178310	3300021352	Seawater	MTFEELNEEFEKLAINHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDK
Ga0206680_100769391	3300021352	Seawater	LSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRDNILEVERPTLN
Ga0206680_103022152	3300021352	Seawater	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLSEDEFKEITKLFLESRDDIPTIKPPTLN
Ga0206680_103153343	3300021352	Seawater	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRDN
Ga0206681_100157298	3300021443	Seawater	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDSILEVEKPTLQ
Ga0206681_101574422	3300021443	Seawater	MDELYEEFEKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKIMTEHILESRDNIFPIDKPTLN
Ga0206681_103047432	3300021443	Seawater	MDELYEEYEKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKVMTEHILKSRDDILTPEIPKIH
Ga0244776_104896972	3300024348	Estuarine	MEELYREFEQLTAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDIQMPDKPTLN
Ga0209644_100014321	3300025125	Marine	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALSKEEFKRITEHILESRDNILEVEKPTLN
Ga0208750_10000443	3300026082	Marine	MDELYEKYEKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKVMTEHILKSRDDIPTSEIPKVH
Ga0208131_10282174	3300026213	Marine	MEKLYREFEKLSMKHDPLASAGIMMAQALKIYKAVLPEEEFKMVTEHILDSRDNIISLEKPTIN
Ga0208965_10455743	3300027406	Marine	MTFEELNEEFEKLAINHEPFLAAGIMMAQAMKIYKAMLSEDEFKEITTRFLESRDDIPTIKPPTLN
Ga0208950_10754133	3300027413	Marine	MDTKCKRIIRKGEKIMEELYREFEQLTAKNEPLQCAGIMMAQALTIYKAALSEDEFKMMTSKILESRDDINVERPTLN
Ga0208947_10097343	3300027553	Marine	MEELYREFEQLTAKNEPLQCAGIMMAQALTIYKAALSEDEFKMMTSKILESRDDI
Ga0209019_10520572	3300027677	Marine	MDELYEEFEKLTMNHEPFMAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Ga0257108_10013183	3300028190	Marine	MDELYEEFEKLTRNHEPFMAAGIMMAQAMKIYKAMLSKDEFKLMTEHILESRDIIQTPDKPTLN
Ga0257108_10033097	3300028190	Marine	MEELYREFEQLSMKGEPLTSAGIMMAQAMKIYKAMLPEAEFKEITTRFLESRDDIPTIKPPTLN
Ga0257108_10193731	3300028190	Marine	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDSILEVE
Ga0257108_10442782	3300028190	Marine	MDELYEEFEKLTMKHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTNHILESRDDMLSVDKPTLQ
Ga0257108_10587092	3300028190	Marine	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRNDILSVDKPTLQ
Ga0257108_11994431	3300028190	Marine	MDNNLEQLYRELERISMQHDPLASAGVMMAQAMKIYKAVLSEEEFKMITEHILDSRNDIISLEKPTIN
Ga0257107_100003126	3300028192	Marine	MDELYEKFEKLAISNEPLMAAGIMMAQAMKIYKAMLSADEFKLMTEHILESRDMIQTPDIPKLH
Ga0257107_10046677	3300028192	Marine	EEFEKLTMKHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTNHILESRDDMLSVDKPTLQ
Ga0257107_10231184	3300028192	Marine	MEKIYREFEQLTMKHEPLTCAGIMMAQALKIYKAVLPEDEFKVMTAHVLESRDDILPIESPTLN
Ga0257107_11387241	3300028192	Marine	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKAALSEEEFKRITEHILESRDSILEVEKPTLN
Ga0257107_12197202	3300028192	Marine	MDELYEEFEKLTMKHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDDMLSVDKPTLQ
Ga0257109_10792494	3300028487	Marine	MDELYEKFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTNHILESRDDMLSVDKPTLQ
Ga0257109_11214161	3300028487	Marine	LYEKFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTL
Ga0257109_12346342	3300028487	Marine	MEKLYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLPEDEFKEITTRFLESRDDIPTIKPPTLN
Ga0257112_100403053	3300028489	Marine	MEELYREFEQLSMKGEPLTSAGIMMAQAMKIYKAMLPEAEFKEITTRFLESRDDLPTIKPPTLN
Ga0257111_10057287	3300028535	Marine	MEELYREFEQLSMKEEPLTSAGIMMAQAMKIYKAMLSKDEFKIMAKHILDEENILPIDKPTLNG
Ga0302119_1000227616	3300031606	Marine	MQTYLQEKIKMDNNLEQLYRDFEKLSMQHEPLASAGVMMAQALKIYKAMLSEEEFLMVTEHILESRDEITIERPTLN
Ga0315328_105367402	3300031757	Seawater	MDELYEEFEKLTMNHEPLMAAGIMMAQAMKIYKVMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Ga0315322_101209791	3300031766	Seawater	GEKIMEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINVERPTLN
Ga0315326_107795332	3300031775	Seawater	ELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRDNILEVERPTLN
Ga0315320_103502413	3300031851	Seawater	KIMEELYREFEQLAAKNEPLQCAGIMMAQALKIYKAALSEDEFKMITSKILESRDDINVERPTLN
Ga0315319_100349542	3300031861	Seawater	MDNNLEQLYRDFERLSMQHEPLASAGVMMAQALKIYKAMLSEEEFLMVTEHILESRDEITIERPTLN
Ga0315319_100996011	3300031861	Seawater	EKLTINHEPLMAAGIMMAQAMKIYKAMLSEDEFKVMTEHILKSRDDILTPEIPKIH
Ga0315318_105913481	3300031886	Seawater	MDELYEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSPEEFKLMTDHILESRDSILEVEKPTLQ
Ga0315324_100118051	3300032019	Seawater	YEEFEKLTRNHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Ga0315324_102548111	3300032019	Seawater	YREFEQLSMKGEPLTSAGIMMAQAMKIYKAMLPEAEFKEITTRFLESRDDIPTIKPPTLN
Ga0315329_100450061	3300032048	Seawater	EEFEKLAINHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDLFETPDIPKLH
Ga0315321_100486966	3300032088	Seawater	MEELYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTLN
Ga0315321_108357411	3300032088	Seawater	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRD
Ga0315333_101660092	3300032130	Seawater	MTFEELNEEFEKLAINHEPFLAAGIMMAQAMKIYKAMLSEDEFKLMTEHILESRDIIQTPDKPTIN
Ga0315334_106130322	3300032360	Seawater	EFEKLSMKEEPLTSAGIMMAQAMKIYKAMLSENEFKLMAKHILDEENIIEVEKPTLQ
Ga0315334_106619411	3300032360	Seawater	MEELYREFEKLSMKEEPLTSAGIMMAQAMKIYKAMLSENEFKLMAKHILDEENIIEVEKPTL
Ga0315334_112992703	3300032360	Seawater	VEELYRKFEKLSMEHEPLTSAGIMMAQALTIYKTALPEEEFKRITEHILESRDNILEVER
Ga0315334_113664181	3300032360	Seawater	MEKLYREFEKLSMTGEPLTSAGIMMAQAMKIYKAMLPEDEFKEITARFLESRNDIPT
Ga0372840_194097_400_594	3300034695	Seawater	MEKLYREFETLAMQHDPLASAGIMMAQALKIYKAILSKEEYYMMTEHILESRDDIVQLEKPTLN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072758

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences