Metagenome Family F072489

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072489
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	82 residues
Representative Sequence	MFGIQPVTPVIVKIVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWKAARSDAAGSTDHTSLDLSSPAR
Number of Associated Samples	52
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.17 %
% of genes near scaffold ends (potentially truncated)	33.88 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (41.322 % of family members)
Environment Ontology (ENVO)	Unclassified (41.322 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.760 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.82% β-sheet: 0.00% Coil/Unstructured: 58.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00883	Peptidase_M17	45.45
PF01520	Amidase_3	33.88
PF02789	Peptidase_M17_N	9.92
PF11741	AMIN	4.96
PF09397	FtsK_gamma	0.83
PF07521	RMMBL	0.83
PF13491	FtsK_4TM	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	55.37
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	33.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.57 %
Unclassified	root	N/A	4.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.57 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	9.92 %
Unclassified	root	N/A	4.13 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.31 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11.57 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	9.92 %
Unclassified	root	N/A	4.13 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.31 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.57 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	9.92 %
Unclassified	root	N/A	4.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.31 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	11.57 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	9.92 %
Unclassified	root	N/A	4.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.31 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
unclassified Roseomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas	11.57 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	9.92 %
Unclassified	root	N/A	4.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.31 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
Roseomonas sp. TAS13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	11.57 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	9.92 %
Unclassified	root	N/A	4.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.31 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101414480	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300001213\|JGIcombinedJ13530_106625288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300003471\|FeGluNO3_10182862	All Organisms → cellular organisms → Bacteria	3306	Open in IMG/M
3300003858\|Ga0031656_10012658	All Organisms → cellular organisms → Bacteria	3533	Open in IMG/M
3300004013\|Ga0055465_10126811	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300004282\|Ga0066599_101341590	Not Available	542	Open in IMG/M
3300006224\|Ga0079037_100025386	All Organisms → cellular organisms → Bacteria → Acidobacteria	4278	Open in IMG/M
3300006224\|Ga0079037_100029858	All Organisms → cellular organisms → Bacteria	4011	Open in IMG/M
3300006224\|Ga0079037_100191362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1829	Open in IMG/M
3300006224\|Ga0079037_100510277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1156	Open in IMG/M
3300006224\|Ga0079037_100759814	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300006224\|Ga0079037_101539322	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300006930\|Ga0079303_10124275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	992	Open in IMG/M
3300006930\|Ga0079303_10219392	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300009009\|Ga0105105_10259378	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300009075\|Ga0105090_10032570	All Organisms → cellular organisms → Bacteria → Acidobacteria	3242	Open in IMG/M
3300009085\|Ga0105103_10223180	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300009091\|Ga0102851_10316225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1534	Open in IMG/M
3300009091\|Ga0102851_10613191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1139	Open in IMG/M
3300009091\|Ga0102851_11760909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300009111\|Ga0115026_10026650	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300009111\|Ga0115026_10031747	All Organisms → cellular organisms → Bacteria → Acidobacteria	2731	Open in IMG/M
3300009111\|Ga0115026_10255075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1204	Open in IMG/M
3300009131\|Ga0115027_10008881	All Organisms → cellular organisms → Bacteria → Acidobacteria	3684	Open in IMG/M
3300009131\|Ga0115027_10060885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1997	Open in IMG/M
3300009131\|Ga0115027_10343589	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300009131\|Ga0115027_11326201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300009167\|Ga0113563_10027275	All Organisms → cellular organisms → Bacteria	4478	Open in IMG/M
3300009167\|Ga0113563_10295288	All Organisms → cellular organisms → Bacteria → Acidobacteria	1677	Open in IMG/M
3300009167\|Ga0113563_10506970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1317	Open in IMG/M
3300009167\|Ga0113563_10829731	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300009167\|Ga0113563_11042161	Not Available	944	Open in IMG/M
3300009167\|Ga0113563_11150971	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300009167\|Ga0113563_11623379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300009167\|Ga0113563_12881254	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300009179\|Ga0115028_11153779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300009179\|Ga0115028_11343453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300013315\|Ga0173609_10256564	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300024056\|Ga0124853_1084487	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300025567\|Ga0210076_1078271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300027683\|Ga0209392_1153195	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300027693\|Ga0209704_1049995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1141	Open in IMG/M
3300027841\|Ga0209262_10011689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3602	Open in IMG/M
3300027871\|Ga0209397_10040016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1672	Open in IMG/M
3300027871\|Ga0209397_10051655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1536	Open in IMG/M
3300027871\|Ga0209397_10154618	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300027871\|Ga0209397_10312296	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300027877\|Ga0209293_10161095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1075	Open in IMG/M
3300027877\|Ga0209293_10675962	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300027885\|Ga0209450_10006974	All Organisms → cellular organisms → Bacteria	5895	Open in IMG/M
3300027885\|Ga0209450_10235358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1306	Open in IMG/M
3300027885\|Ga0209450_11284162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027887\|Ga0208980_10076481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1958	Open in IMG/M
3300027887\|Ga0208980_10166490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1290	Open in IMG/M
3300027890\|Ga0209496_10388254	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300027890\|Ga0209496_10731227	Not Available	543	Open in IMG/M
3300027897\|Ga0209254_10012631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	7770	Open in IMG/M
3300027897\|Ga0209254_10538186	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300027899\|Ga0209668_10071506	Not Available	1938	Open in IMG/M
3300027899\|Ga0209668_10213807	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300027900\|Ga0209253_10031762	All Organisms → cellular organisms → Bacteria	4424	Open in IMG/M
3300027902\|Ga0209048_10046591	All Organisms → cellular organisms → Bacteria → Acidobacteria	3569	Open in IMG/M
3300031834\|Ga0315290_10116839	All Organisms → cellular organisms → Bacteria → Acidobacteria	2266	Open in IMG/M
3300031997\|Ga0315278_10255497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1809	Open in IMG/M
3300032156\|Ga0315295_10401324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1395	Open in IMG/M
3300033406\|Ga0316604_10589890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300033408\|Ga0316605_10003187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	9307	Open in IMG/M
3300033408\|Ga0316605_10004355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	8034	Open in IMG/M
3300033408\|Ga0316605_10150060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1893	Open in IMG/M
3300033408\|Ga0316605_10423212	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300033408\|Ga0316605_10460820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1162	Open in IMG/M
3300033408\|Ga0316605_10505943	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300033408\|Ga0316605_11024412	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300033408\|Ga0316605_11322868	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300033408\|Ga0316605_11351059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300033408\|Ga0316605_11856825	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300033408\|Ga0316605_12015147	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300033408\|Ga0316605_12518890	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300033413\|Ga0316603_10087838	All Organisms → cellular organisms → Bacteria → Acidobacteria	2415	Open in IMG/M
3300033413\|Ga0316603_10252236	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300033413\|Ga0316603_10314546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1388	Open in IMG/M
3300033413\|Ga0316603_10656818	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300033413\|Ga0316603_11062552	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300033413\|Ga0316603_11267351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300033413\|Ga0316603_12193115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300033414\|Ga0316619_10273023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1272	Open in IMG/M
3300033414\|Ga0316619_10395882	All Organisms → cellular organisms → Bacteria → Acidobacteria	1093	Open in IMG/M
3300033414\|Ga0316619_10674737	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300033416\|Ga0316622_100013090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	6788	Open in IMG/M
3300033416\|Ga0316622_100303655	All Organisms → cellular organisms → Bacteria → Acidobacteria	1756	Open in IMG/M
3300033416\|Ga0316622_100306878	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300033416\|Ga0316622_100388965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1564	Open in IMG/M
3300033416\|Ga0316622_100706469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1166	Open in IMG/M
3300033416\|Ga0316622_101944566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300033418\|Ga0316625_100230723	All Organisms → cellular organisms → Bacteria → Acidobacteria	1249	Open in IMG/M
3300033418\|Ga0316625_101086391	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300033418\|Ga0316625_102186964	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300033419\|Ga0316601_100074223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2640	Open in IMG/M
3300033419\|Ga0316601_100910594	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300033419\|Ga0316601_101676771	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	641	Open in IMG/M
3300033481\|Ga0316600_10013737	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300033482\|Ga0316627_100500671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1078	Open in IMG/M
3300033482\|Ga0316627_101001406	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300033482\|Ga0316627_101924962	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300033482\|Ga0316627_102658805	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300033483\|Ga0316629_10217434	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300033483\|Ga0316629_11464127	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300033485\|Ga0316626_10475328	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300033488\|Ga0316621_10068241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1869	Open in IMG/M
3300033488\|Ga0316621_10663704	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300033521\|Ga0316616_100253464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1816	Open in IMG/M
3300033521\|Ga0316616_100509288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1382	Open in IMG/M
3300033521\|Ga0316616_100974149	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300033557\|Ga0316617_102843951	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300033557\|Ga0316617_102850056	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300034052\|Ga0373889_016231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1049	Open in IMG/M
3300034055\|Ga0373892_020965	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300034056\|Ga0373893_006129	All Organisms → cellular organisms → Bacteria → Acidobacteria	1255	Open in IMG/M
3300034192\|Ga0373896_013585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300034420\|Ga0373918_0027901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1323	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.04%
Engineered	Engineered	4.96%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	51.24%
Terrestrial	Environmental → Terrestrial	43.80%
Bioremediation	Engineered → Bioremediation	4.13%
Wastewater	Engineered → Wastewater	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	46.28%
Soil	Environmental → Terrestrial → Soil	42.15%
Marine	Environmental → Aquatic → Marine	4.96%
Metal	Engineered → Bioremediation → Metal	4.13%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.65%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.83%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	41.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	18.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.88%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.26%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.96%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	4.13%
Lake	Environmental → Aquatic → Freshwater → Lake	3.31%
Pond	Environmental → Aquatic → Freshwater → Pond	1.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.83%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	41.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	18.18%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	14.88%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	8.26%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	4.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.31%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.31%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	41.32%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	14.88%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	14.05%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	8.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.13%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	4.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.31%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.31%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.65%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.65%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.83%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003471	Fe-reducing enrichment culture from wetland. Sample 5 with periodic nitrate additions.	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034052	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.2	Engineered	Open in IMG/M
3300034055	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.2	Engineered	Open in IMG/M
3300034056	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.3	Engineered	Open in IMG/M
3300034192	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.3	Engineered	Open in IMG/M
3300034420	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1014144801	3300001213	Wetland	RRYNNGRNMFGIQPVTPVIVKVVSDPTPQVTVVDVLLDSLGLTGVILAGSLVLGGVVGLLLIAHSRWQAARSERTGSTGHTALDLSSPIK*
JGIcombinedJ13530_1066252881	3300001213	Wetland	MQPITPVIVKVVSDPTPQVSVVDVLVNSLGLTGVILAGSFVLGGVVGLALIAYSRWKAGRSDSAGTSEHTSLDLSSPL*
FeGluNO3_101828623	3300003471	Wetland Sediment	MLGXXXXXXXXDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGILLIAYSRWKVARSGDGGSTEHTSLDLSSPAK*
Ga0031656_100126583	3300003858	Freshwater Lake Sediment	MFGIQPLTPIIVKVVSDPTPQVSVVDVLVDALGLTGLILAGSFVLGGVVGVLLIARSRWKAARPDRAGATDHTSLDLSSPAR*
Ga0055465_101268111	3300004013	Natural And Restored Wetlands	MLGLQPVTPVIVKIVSEPTAQVTVVDVLVNALGLTGVIVVGSFAVGGILGLLLIAYSRWKTARAGDAGSTDHTSLDLSSPAK*
Ga0066599_1013415902	3300004282	Freshwater	MFGIQPITPIIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVVGVLLIAYSRWKAERSDRAGATDHTSLDLSSPAR*
Ga0079037_1000253863	3300006224	Freshwater Wetlands	MFGVQPVTPVIVKVVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGCLLIAYSRWKSARSDGSASTDHTSLDLSSPAR*
Ga0079037_1000298582	3300006224	Freshwater Wetlands	MLGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAAAGSTEHTTLDLSSPAR*
Ga0079037_1001913622	3300006224	Freshwater Wetlands	MFGLQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIAAGSFVLGGVVGLLLIGYSRWKIVRAGEAGTSEHTSLDLSSPSR*
Ga0079037_1005102772	3300006224	Freshwater Wetlands	MLGFQPLTPVIVKVVADPTPQVTVVDVLVDALGLTGLIVAGSVVLGGVLGLILIAFKRWRAARSGDGDSTDHTSLDLSSPAR*
Ga0079037_1007598142	3300006224	Freshwater Wetlands	MFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK*
Ga0079037_1015393222	3300006224	Freshwater Wetlands	MLLIQPITPVIVKIVSDPTPQVTVVDVLVNALGLTGLIVAGSFVLGGIVGLLLIVYKRWRAARSDDAGATEHTSLDLSSPAK*
Ga0079303_101242752	3300006930	Deep Subsurface	MFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVGGSFVLGGVVGLLLIAYSRWRTERSQDAGRTDHTSLDLSSPLK*
Ga0079303_102193922	3300006930	Deep Subsurface	MFGIQPVTPVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK*
Ga0105105_102593782	3300009009	Freshwater Sediment	VFDIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGILLIAYSRWKAARSEGDGSSDHTSLDLSSPSR*
Ga0105090_100325703	3300009075	Freshwater Sediment	VFHIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVFGILLIAYSRWKAARSEGDGTSDHTSLDLSSPSR*
Ga0105103_102231802	3300009085	Freshwater Sediment	VFHIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGLVGILLIAYSRWKAARSEGDGTSDHTSLDLSSPSR*
Ga0102851_103162252	3300009091	Freshwater Wetlands	MFGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAFSRWKVGRSDRAGLTDHTSLDLSSPAK*
Ga0102851_106131912	3300009091	Freshwater Wetlands	MFGIQPVTPIIVKVIPDPTPQVTVVDVIVDALGLTGVIVAGSLVLGGIVGILLIAYSRRKLARSAGAASTEHTSLDLSSPAR*
Ga0102851_117609092	3300009091	Freshwater Wetlands	MLGFQPVTPVIIKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGVLLIAYKRWRAARLDEAGAT
Ga0115026_100266504	3300009111	Wetland	YNNARRMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK*
Ga0115026_100317472	3300009111	Wetland	MLGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAEAGSTEHTTLDLSSPAR*
Ga0115026_102550752	3300009111	Wetland	MFGIQPVTPVIVKVVSDPTPQVSVVAVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK*
Ga0115027_100088812	3300009131	Wetland	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAGTSDHTSLDLSSPPK*
Ga0115027_100608852	3300009131	Wetland	MAAAIGPPGYNNASRMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK*
Ga0115027_103435892	3300009131	Wetland	MFGMQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGILLIAYSRWKVARSGEDGSTDHTSLDLSSPSK*
Ga0115027_113262012	3300009131	Wetland	MFGFQPVTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAGTSDHTSLDLSSPLK*
Ga0113563_100272752	3300009167	Freshwater Wetlands	MLGFQPVTPVIIKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVAGVLLIAYKRWRAARLDEAGATEHTSLDLSSPAK*
Ga0113563_102952882	3300009167	Freshwater Wetlands	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAGTSEHTSLDLSSPQQ*
Ga0113563_105069702	3300009167	Freshwater Wetlands	MFGIQPVTPIIVKVVPDPTPQVTVVDVIVDALGLTGVIVAGSLVLGGIVGLLLIAYSRRKLARSAGAASTEHTSLDLSSPAR*
Ga0113563_108297312	3300009167	Freshwater Wetlands	MSLIQPVTPVIIKIVSEPTPQVTVVDVLVDALGLTGVIVAGSFLLGGVVGLLLILYSRWKTARSDQAGLTDHTSLGLSSPVK*
Ga0113563_110421612	3300009167	Freshwater Wetlands	MFGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGVLLIAYSRWKTARSHDAGTTDHTSLNLSSPAR*
Ga0113563_111509712	3300009167	Freshwater Wetlands	MSGIQPVTPVIVKIVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRSAKLAGGASTDHTSLDLSSPAR*
Ga0113563_116233791	3300009167	Freshwater Wetlands	MFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGVPLIAYSRWKTAPSPDAGRTDHTSLDL
Ga0113563_128812542	3300009167	Freshwater Wetlands	AMYGIQPITPVIVKVVSEPTAQVTVVDVIVGALGLTGLILAGSLVVGGILGALLIARSRRLAARDGGSSGTDHTALDLSSPLK*
Ga0115028_111537791	3300009179	Wetland	MFGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRSERSPDAGRTDHTSLD
Ga0115028_113434531	3300009179	Wetland	MFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRSERSPDAGRTDHTSLD
Ga0173609_102565642	3300013315	Sediment	MQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGILLIAYSRWKAARSEGDGSSDHTSLDLSSPSS*
Ga0124853_10844872	3300024056	Freshwater Wetlands	MVSAIRPPGYNNASRMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK
Ga0210076_10782712	3300025567	Natural And Restored Wetlands	MLGLQPVTPVIVKIVSEPTAQVTVVDVLVNALGLTGVIVVGSFAVGGILGLLLIAYSRWKTARAGDAGSTDHTSLDLSSPAK
Ga0209392_11531952	3300027683	Freshwater Sediment	VFHIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVFGILLIAYSRWKAARSEGDGTSDHTSLDLS
Ga0209704_10499952	3300027693	Freshwater Sediment	VFHIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVFGILLIAYSRWKAARSEGDGTSDHTSLDLSSPSR
Ga0209262_100116893	3300027841	Freshwater	MFGMQPLTPVIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVFGVLLIMYSRRKAARSDRTGSTDHTSLDLSSPAR
Ga0209397_100400162	3300027871	Wetland	MLGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAAAGSTEHTTLDLSSPAR
Ga0209397_100516552	3300027871	Wetland	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAGTSDHTSLDLSSPPK
Ga0209397_101546182	3300027871	Wetland	MQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGILLIAYSRWKVARSGEDGSTDHTSLDLSSPSK
Ga0209397_103122961	3300027871	Wetland	PVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK
Ga0209293_101610952	3300027877	Wetland	MLGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAEAGSTEHTTLDLSSPAR
Ga0209293_106759621	3300027877	Wetland	GLPPRYNSVRTMFGVQPVTPVIVKVVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGCLLIAYSRWKSARSDGSASTDHTSLDLSSPAR
Ga0209450_100069745	3300027885	Freshwater Lake Sediment	VFHIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGIVGILLIAYTRRKAARSEGDGTSDHTSLDLSSPSR
Ga0209450_102353581	3300027885	Freshwater Lake Sediment	MFGIQPLTPIIVKVVSDPTPQVSVVDVLVDALGLTGVILAGSFVLGGVVGVLLIAHSRRKAARPDRAGATGHTSLDLSSPAR
Ga0209450_112841622	3300027885	Freshwater Lake Sediment	MFGLQPLTPVIVKVASDPTPQVTVVDVLVDALGLTGVIAAGSFVLGGVVGLLLIGYSRWKIARAGEAGTSEHTSLDLSSPP
Ga0208980_100764812	3300027887	Wetland	MQPITPVIVKVVSDPTPQVSVVDVLVNSLGLTGVILAGSFVLGGVVGLALIAYSRWKAGRSDSAGTSEHTSLDLSSPL
Ga0208980_101664902	3300027887	Wetland	MFGIQPVTPVIVKVVSDPTPQVTVVDVLLDSLGLTGVILAGSLVLGGVVGLLLIAHSRWQAARSERTGSTGHTALDLSSPIK
Ga0209496_103882542	3300027890	Wetland	GYNSGSAMFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK
Ga0209496_107312271	3300027890	Wetland	NASRMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK
Ga0209254_100126313	3300027897	Freshwater Lake Sediment	MFGIQPLTPIIVKVVSDPTPQVSVVDVLVDALGLTGLILAGSFVLGGVVGVLLIARSRWKAARPDRAGATDHTSLDLSSPAR
Ga0209254_105381862	3300027897	Freshwater Lake Sediment	MFGMQPLTPVIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVFGVLLIVYSRWKAARSDRTGSTDHTSLDLSSPAS
Ga0209668_100715061	3300027899	Freshwater Lake Sediment	MFGFQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVFGGVIGLLLIAYSRWRAAQSDGTGSSDH
Ga0209668_102138072	3300027899	Freshwater Lake Sediment	MFGMQPLTPVIVKVVSDPTPQVTVVDVLVDALGLTGFIVAGSFVLGGVVGVLLIVYSRWKAARSDRPGATDHTSLDLSSPAR
Ga0209253_100317624	3300027900	Freshwater Lake Sediment	MFGIQPITPIIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVVGVLLIAYSRWKAARSDRPGATDHTSLDLSSPAR
Ga0209048_100465913	3300027902	Freshwater Lake Sediment	MFAFQPLTPVIVKVVSDPTPQVTVVDVIVDALGLTGAIVAGSFALGGIVGILLIAFAKWREARAGGAVPSDHTTLDLSAPRQ
Ga0315290_101168391	3300031834	Sediment	VVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVVGVLLIVYSRWKAARSDRTGSTDHTSLDLSSPAR
Ga0315290_108301792	3300031834	Sediment	MFGMQPLTPVIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVVGVLLIAYSRWKAVRSDRP
Ga0315278_102554972	3300031997	Sediment	MFGMQPLTPVIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVVGVLLIAYSRWKAARSDRPGATDHTSLDLSSPAR
Ga0315295_104013242	3300032156	Sediment	MFGMQPLTPVIVKVVSDPTPQVTVVDVLVDALGLTGLIVAGSFVLGGVVGVLLIAYSRWKAARSDRPGATDHTSLDLSSPGR
Ga0316604_105898901	3300033406	Soil	MAAAIGPPGYNNARRMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK
Ga0316605_100031874	3300033408	Soil	MFGLQPVTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAGTSDHTSLDLSSPLK
Ga0316605_100043554	3300033408	Soil	MFGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGVLLIAYSRWKTARSHDAGTTDHTSLNLSSPAR
Ga0316605_101500602	3300033408	Soil	RYNSVRTMFGVQPVTPVIVKVVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGCLLIAYSRWKSARSDGSASTDHTSLDLSSPAR
Ga0316605_104232122	3300033408	Soil	MSLIQPVTPVIIKIVSEPTPQVTVVDVLVDALGLTGVIVAGSFLLGGVVGLLLILYSRWKTARSDQAGLTDHTSLGLSSPVK
Ga0316605_104608202	3300033408	Soil	RDYNRLRTMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWKTARSNGAGSTDHTSLDLSSPLR
Ga0316605_105059432	3300033408	Soil	MSGIQPITPVIVKIVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRSAKLAGGASTDHTSLDLSSPAR
Ga0316605_110244121	3300033408	Soil	QAASPRRDYNRGRPMLGMQPVTPIIVKVVSDPTPQVTVVDVLVNALGLTGVIVAGSFVLGGVVGILLIVYSRWRTARSGGADSTDHTLLDLSSPAK
Ga0316605_113228682	3300033408	Soil	MFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK
Ga0316605_113510591	3300033408	Soil	MFGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAFSRWKVGRSDRAGLTDHTSLDLSSPAK
Ga0316605_118568251	3300033408	Soil	PRRDYNSGRSMLGMQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVFGILLIAYSRWKVARAGDGGSTEHTSLDLSSPST
Ga0316605_120151472	3300033408	Soil	MARRTATGSGPRRYNSVNAMFGFQPITPVIVKVVSDPTPQVTVVDVLVDALGLTGLIVAASFVLGGIVGLLLIAYKRWKEARSDEAGATEHTSLDLSSPAK
Ga0316605_125188902	3300033408	Soil	IIVKVVSEPTPQVTVVDVLVDALGLTGALVAGSFVLGGVVGVLLIAYSRWKAARSGNGGSTEHTSLDLSSPSS
Ga0316603_100878382	3300033413	Soil	MFGVQPVTPVIVKVVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGCLLIAYSRWKSARSDGSASTDHTSLDLSSPAR
Ga0316603_102522362	3300033413	Soil	MLGFQPVTPVIIKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGVLLIAYKRWRAARLDEAGATEHTSLDLSSPAK
Ga0316603_103145461	3300033413	Soil	AGYNSVRTMLGIQPVTPVIIKVVSEPTPQVTVVDVLVDALGLTGVIVAGSLVLGGVVGLLLILYSRWKTARSDRAGLTDHTSLGLSSPVK
Ga0316603_106568182	3300033413	Soil	MFGIQPVTPVIVKIVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWKAARSDAAGSTDHTSLDLSSPAR
Ga0316603_110625521	3300033413	Soil	PVIVKVVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRSAKLAGGASTDHTSLDLSSPAR
Ga0316603_112673512	3300033413	Soil	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAG
Ga0316603_121931152	3300033413	Soil	MFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVLVAGSFVLGGVVGLLLIAYSRWRTERSPDAGR
Ga0316619_102730232	3300033414	Soil	MFGLQPLTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK
Ga0316619_103958822	3300033414	Soil	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAGTSDHTSLDLSSPLK
Ga0316619_106747372	3300033414	Soil	MLGFQPLTPVIVKVVADPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGVLLIAYSRWKTARSHDAGTTDHTSLNLSSPAR
Ga0316622_1000130903	3300033416	Soil	MLGIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAEAGSTEHTTLDLSSPAR
Ga0316622_1003036552	3300033416	Soil	MFGIQPVTPIIVKVVPDPTPQVTVVDVIVDALGLTGVIVAGSLVLGGIVGLLLIAYSRRKLARSAGAASTEHTSLDLSSPAR
Ga0316622_1003068782	3300033416	Soil	MLGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAAA
Ga0316622_1003889652	3300033416	Soil	MFGFQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLALIAYARWKAARSDEAGLTEHTSLDLSSPSK
Ga0316622_1007064692	3300033416	Soil	VTPVIVKVVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGCLLIAYSRWKSARSDGSASTDHTSLDLSSPAR
Ga0316622_1019445662	3300033416	Soil	MLGFQPLTPVIVKVVADPTPQVTVVDVLVDALGLTGVIVAVSFLLGGVVGIALIAFKRWRAARSGDAETTDHTSLDLSSPAK
Ga0316625_1002307232	3300033418	Soil	MFGLQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK
Ga0316625_1010863912	3300033418	Soil	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARTGEAGTSDHTSLDLSSPLK
Ga0316625_1021869641	3300033418	Soil	MFGMQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGILLIAYSRWKVARSGEDGSTDHTSLDLSSPSK
Ga0316601_1000742231	3300033419	Soil	TPVIIKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGVLLIAYKRWRAARLDEAGATEHTSLDLSSPAK
Ga0316601_1009105942	3300033419	Soil	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARTGEAGMSDHTSLDLSSPLK
Ga0316601_1016767712	3300033419	Soil	GMQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVFGILLIAYSRWKVARAGDGGSTEHTSLDLSSPST
Ga0316600_100137373	3300033481	Soil	MAAAIRRPGYNNASRMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK
Ga0316627_1005006712	3300033482	Soil	LQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGEAGTSDHTSLDLSSPLK
Ga0316627_1010014062	3300033482	Soil	SDPTPQVTVVDVLVDSLGLTGVIVAGSFILGGIVGLLLIAFSRWKAARSDGAASTDHTSLDLSSPVK
Ga0316627_1019249622	3300033482	Soil	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARAGEAGTSDHTSLDLSSPLK
Ga0316627_1026588052	3300033482	Soil	RTPGRMPEGTLPAGYNSGSAMFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK
Ga0316629_102174342	3300033483	Soil	MPEGTLPAGYNSGSAMFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVGGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK
Ga0316629_114641271	3300033483	Soil	PVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWKTARSDGAGSTDHTSLDLSSPLR
Ga0316626_104753282	3300033485	Soil	MLGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAAAGSTEHTTLD
Ga0316621_100682411	3300033488	Soil	RIMFGIQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAFSRWKVGRSDRAGLTDHTSLDLSSPAK
Ga0316621_106637042	3300033488	Soil	MLGIQPVTPIIVKVVSDPTPQVTVVDVLVDALGLTGVIVAGSFVLGGIVGLLLIAYSRRKLARLAAAG
Ga0316616_1002534642	3300033521	Soil	MFGFQPVTPVIVKVVSDPTPQVTVVDVLVDALGLTGVMVAGSFVLGGVVGLLLIAYSRWKAARSDQAGLTDHTSLDLSSPLK
Ga0316616_1005092882	3300033521	Soil	PATGVPQRYNSVRTMSGIQPITPVIVKIVSDATPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRSAKLAGGASTDHTSLDLSSPAR
Ga0316616_1009741492	3300033521	Soil	MTGIQPITPVIVKVVSDPTPQVTVVDVIVGALGLTGLILVGSLVVGGIVGALLIARSRRLAARDGGGSGSDHTALDLSSPLK
Ga0316617_1028439512	3300033557	Soil	RPRARRSRRRYNSGSGMLGFQPLTPVIVKVVADPTPQVTVVDVLVDALGLTGLIVAGSVVLGGVLGLILIAFKRWRAARSGDGDSTDHTSLDLSSPAR
Ga0316617_1028500562	3300033557	Soil	RIPGRRPKGTLPAGYNSGSAMFGIQPVTPVIVKVVSDPTPQVSVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIAYSRWRTERSPDAGRTDHTSLDLSSPLK
Ga0373889_016231_817_1047	3300034052	Sediment Slurry	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGDAGTSAHTSLDL
Ga0373892_020965_374_622	3300034055	Sediment Slurry	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGDAGTSDHTSLDLSSPLK
Ga0373893_006129_491_739	3300034056	Sediment Slurry	MFELQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSFVLGGVVGLLLIGYSRWKIARSGDAGTSDHTSLDLSSPLK
Ga0373896_013585_3_233	3300034192	Sediment Slurry	MFGLQPLTPVIVKVASDPTPQVTVVDVLVDALGLTGVIAAGSFVLGGVVGLLLIGYSRWKIARAGEAGTSEHTSLDL
Ga0373918_0027901_906_1154	3300034420	Sediment Slurry	MFGLQPLTPVIVKVVSEPTPQVTVVDVLVDALGLTGVIVAGSLVLGGVVGLLLIGYSRWKTERSGEAGTSEHTSLDLSSPPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072489

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences