NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F072399

Metagenome / Metatranscriptome Family F072399

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072399
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 45 residues
Representative Sequence MQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEEP
Number of Associated Samples 107
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.74 %
% of genes near scaffold ends (potentially truncated) 95.87 %
% of genes from short scaffolds (< 2000 bps) 89.26 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.347 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.008 % of family members)
Environment Ontology (ENVO) Unclassified
(42.149 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(38.843 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.28%    β-sheet: 5.56%    Coil/Unstructured: 79.17%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00753Lactamase_B 14.05
PF01883FeS_assembly_P 11.57
PF04542Sigma70_r2 4.13
PF03301Trp_dioxygenase 2.48
PF00069Pkinase 2.48
PF00667FAD_binding_1 2.48
PF13366PDDEXK_3 0.83
PF07638Sigma70_ECF 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 9.92
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 4.96
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 4.13
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 4.13
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 4.13
COG0369Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductasesNucleotide transport and metabolism [F] 2.48
COG3483Tryptophan 2,3-dioxygenase (vermilion)Amino acid transport and metabolism [E] 2.48

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.35 %
UnclassifiedrootN/A1.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000597|AF_2010_repII_A1DRAFT_10007437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus3020Open in IMG/M
3300000890|JGI11643J12802_11916804All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia820Open in IMG/M
3300000890|JGI11643J12802_11936655All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1010Open in IMG/M
3300000956|JGI10216J12902_102000556All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia733Open in IMG/M
3300005093|Ga0062594_102535870All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia564Open in IMG/M
3300005331|Ga0070670_101541325All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia610Open in IMG/M
3300005364|Ga0070673_102212454All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia522Open in IMG/M
3300005438|Ga0070701_10863644All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia622Open in IMG/M
3300005451|Ga0066681_10189493All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae1226Open in IMG/M
3300005451|Ga0066681_10970243All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia507Open in IMG/M
3300005457|Ga0070662_100215233All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300005457|Ga0070662_100973415All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia726Open in IMG/M
3300005540|Ga0066697_10132642All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1465Open in IMG/M
3300005560|Ga0066670_11009013All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia509Open in IMG/M
3300005564|Ga0070664_100756706All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia907Open in IMG/M
3300005575|Ga0066702_10204414All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1196Open in IMG/M
3300005577|Ga0068857_101760927All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia606Open in IMG/M
3300005618|Ga0068864_101878172All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia605Open in IMG/M
3300006057|Ga0075026_100669985All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia617Open in IMG/M
3300006358|Ga0068871_100116146All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2256Open in IMG/M
3300006573|Ga0074055_11212300All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia589Open in IMG/M
3300006623|Ga0101568_10819714All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia718Open in IMG/M
3300006796|Ga0066665_10043008All Organisms → cellular organisms → Bacteria3061Open in IMG/M
3300006797|Ga0066659_10264612All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.1294Open in IMG/M
3300006852|Ga0075433_11396994All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia606Open in IMG/M
3300007788|Ga0099795_10321456All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia685Open in IMG/M
3300009094|Ga0111539_10453003All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300009553|Ga0105249_12061800All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia643Open in IMG/M
3300009792|Ga0126374_11786083All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia514Open in IMG/M
3300010046|Ga0126384_11031473All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium750Open in IMG/M
3300010320|Ga0134109_10011178All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2582Open in IMG/M
3300010329|Ga0134111_10226341All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia762Open in IMG/M
3300010329|Ga0134111_10294780All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia675Open in IMG/M
3300010333|Ga0134080_10222948All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia824Open in IMG/M
3300010359|Ga0126376_11786162All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia652Open in IMG/M
3300010366|Ga0126379_11011813All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia936Open in IMG/M
3300012198|Ga0137364_10275346All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1246Open in IMG/M
3300012203|Ga0137399_10128107All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae2003Open in IMG/M
3300012206|Ga0137380_10924447All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia748Open in IMG/M
3300012211|Ga0137377_10157788All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2174Open in IMG/M
3300012350|Ga0137372_10343464All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1145Open in IMG/M
3300012351|Ga0137386_10503020Not Available873Open in IMG/M
3300012353|Ga0137367_10734878All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia686Open in IMG/M
3300012354|Ga0137366_10167029All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1653Open in IMG/M
3300012356|Ga0137371_10649678All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia808Open in IMG/M
3300012358|Ga0137368_10351884All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia979Open in IMG/M
3300012361|Ga0137360_10301263All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1330Open in IMG/M
3300012897|Ga0157285_10166921All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia667Open in IMG/M
3300012906|Ga0157295_10325113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia547Open in IMG/M
3300012923|Ga0137359_10432706All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1165Open in IMG/M
3300012957|Ga0164303_10204114All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1097Open in IMG/M
3300012976|Ga0134076_10294084All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia702Open in IMG/M
3300012984|Ga0164309_10110545All Organisms → cellular organisms → Bacteria1755Open in IMG/M
3300012989|Ga0164305_10561573All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia910Open in IMG/M
3300013308|Ga0157375_10791631All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300014969|Ga0157376_10292215All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300015357|Ga0134072_10362861All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia560Open in IMG/M
3300015372|Ga0132256_103379601All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia537Open in IMG/M
3300016270|Ga0182036_10381038All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1094Open in IMG/M
3300018061|Ga0184619_10075922All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1488Open in IMG/M
3300018433|Ga0066667_10765603All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia816Open in IMG/M
3300018433|Ga0066667_11290944All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia637Open in IMG/M
3300018433|Ga0066667_11971699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia535Open in IMG/M
3300018482|Ga0066669_11027865All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia744Open in IMG/M
3300019873|Ga0193700_1053228All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia633Open in IMG/M
3300019875|Ga0193701_1074358All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia666Open in IMG/M
3300019883|Ga0193725_1042550All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1182Open in IMG/M
3300019886|Ga0193727_1031631All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1810Open in IMG/M
3300019887|Ga0193729_1086285All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1216Open in IMG/M
3300019887|Ga0193729_1151493All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia837Open in IMG/M
3300019890|Ga0193728_1067506All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1707Open in IMG/M
3300019996|Ga0193693_1021485All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1196Open in IMG/M
3300020004|Ga0193755_1104780Not Available892Open in IMG/M
3300020022|Ga0193733_1149652All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia632Open in IMG/M
3300020062|Ga0193724_1005677All Organisms → cellular organisms → Bacteria2683Open in IMG/M
3300021344|Ga0193719_10028270All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2413Open in IMG/M
3300022534|Ga0224452_1196935All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia619Open in IMG/M
3300022534|Ga0224452_1274850All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia514Open in IMG/M
3300022756|Ga0222622_10172949All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1412Open in IMG/M
3300025271|Ga0207666_1085997All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia509Open in IMG/M
3300025315|Ga0207697_10046405All Organisms → cellular organisms → Bacteria1790Open in IMG/M
3300025315|Ga0207697_10430245All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia586Open in IMG/M
3300025915|Ga0207693_10014555All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6321Open in IMG/M
3300025916|Ga0207663_10926897All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia697Open in IMG/M
3300025925|Ga0207650_11551249All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia563Open in IMG/M
3300025932|Ga0207690_11076504All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia670Open in IMG/M
3300025933|Ga0207706_11060534All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia679Open in IMG/M
3300025936|Ga0207670_11107264All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia669Open in IMG/M
3300025939|Ga0207665_10601187All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia859Open in IMG/M
3300025986|Ga0207658_10594558All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia994Open in IMG/M
3300025986|Ga0207658_11487523All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia619Open in IMG/M
3300026329|Ga0209375_1037026All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2568Open in IMG/M
3300026532|Ga0209160_1313881All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia534Open in IMG/M
3300026557|Ga0179587_10117846All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1626Open in IMG/M
3300026689|Ga0208579_103216All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia604Open in IMG/M
3300026820|Ga0207603_105110All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia570Open in IMG/M
3300027915|Ga0209069_10958484All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia522Open in IMG/M
3300028379|Ga0268266_11494618All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia651Open in IMG/M
3300028379|Ga0268266_12223319All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia520Open in IMG/M
3300028381|Ga0268264_12323560All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia543Open in IMG/M
3300028592|Ga0247822_11329094All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia603Open in IMG/M
3300028807|Ga0307305_10577387All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia501Open in IMG/M
3300028885|Ga0307304_10373283All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia641Open in IMG/M
3300031170|Ga0307498_10155075All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia764Open in IMG/M
3300031446|Ga0170820_15939074All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium586Open in IMG/M
3300031573|Ga0310915_10969161All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia594Open in IMG/M
3300031719|Ga0306917_10122265All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300031720|Ga0307469_11700017All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia608Open in IMG/M
3300031720|Ga0307469_12134611All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia545Open in IMG/M
3300031854|Ga0310904_10785889All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia665Open in IMG/M
3300031910|Ga0306923_12058233All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia577Open in IMG/M
3300031912|Ga0306921_10233709All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2153Open in IMG/M
3300031912|Ga0306921_11906729All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia636Open in IMG/M
3300031946|Ga0310910_10710866All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia794Open in IMG/M
3300031996|Ga0308176_11432577All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia735Open in IMG/M
3300032001|Ga0306922_10145714All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2530Open in IMG/M
3300032076|Ga0306924_10154225All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2630Open in IMG/M
3300032174|Ga0307470_11230019All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia610Open in IMG/M
3300032516|Ga0315273_12729796All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia562Open in IMG/M
3300033412|Ga0310810_10389715All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1444Open in IMG/M
3300033412|Ga0310810_10513200All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1187Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.01%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.13%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.31%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.48%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.65%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.65%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.65%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006623Soil microbial communities from the Leymus chinensis steppe, China - after adding 5.25 g N m- 2, yr-1EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300019996Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026689Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN581 (SPAdes)EnvironmentalOpen in IMG/M
3300026820Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-A (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A1DRAFT_1000743763300000597Forest SoilMESQAINAAVCPECGTRLEGAFSRGLGRCMICLLRVG
JGI11643J12802_1191680423300000890SoilMQTQATSAAVCPECGTRLEGAFSRNLGRCMICLLRV
JGI11643J12802_1193665523300000890SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEE
JGI10216J12902_10200055613300000956SoilMQTQAISAAICPECGTRLEGGFSCDLGRCMICLLRVGFDDAE
Ga0062594_10253587013300005093SoilMQTQAISAAVCPECGTRLAGGFSRGLGRCMICLLRVGFDDAEEP
Ga0070670_10154132523300005331Switchgrass RhizosphereMQAQATSAAVCPECGTRLEAGFSRGLARCMICLLRVGFDDAEEPNEAALS
Ga0070673_10221245423300005364Switchgrass RhizosphereMQAQATSAAVCPECGTRLEAGFSRGLGRCMICLLRVGFDDAEEPNEAA
Ga0070701_1086364423300005438Corn, Switchgrass And Miscanthus RhizosphereMQTQVTSVAVCPECGTRLEGAFSRNLGRCMICLLRVGFDD
Ga0066681_1018949313300005451SoilMRVQATSAAVCPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDETLSAPV
Ga0066681_1097024313300005451SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEEPDETLSAPV
Ga0070662_10021523333300005457Corn RhizosphereMQTQVTSVAVCPECGTRLEGAFSRNLGRCMICLLRVGFDDA
Ga0070662_10097341523300005457Corn RhizosphereMQAQATSAAVCPECGTRLEAGFSRGLGRCMICLLRVGFDDAEEPNEAAL
Ga0066697_1013264233300005540SoilMLTQEPTIPICPECGTRLEGGFSRNLGRCMICLLRVGFDDAE
Ga0066670_1100901323300005560SoilMQPQATSVGVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDETLSAPV
Ga0070664_10075670623300005564Corn RhizosphereMQTQVTSVAVCPECGTRLEGAFSRNLGRCMICLLRVGFD
Ga0066702_1020441413300005575SoilMLTQEPTIPICPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEPNEAPLS
Ga0068857_10176092723300005577Corn RhizosphereMQTQVTSVAVCPECGTRLEGAFSRNLGRCMICLLRVGFDDAKEPDETLFAPV
Ga0068864_10187817223300005618Switchgrass RhizosphereMQAQATSAAVCPECGTRLDGGFSRGLGRCMICLLRVGFDDA
Ga0075026_10066998523300006057WatershedsMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEEPDEKLFAP
Ga0068871_10011614613300006358Miscanthus RhizosphereMQTQTTSAVVCPECGTRLEGGFSRGLGRCMICLLRV
Ga0074055_1121230013300006573SoilMQAQGTSAAVCPECGTRLEGGFSRNLGHCMICLLRVG
Ga0101568_1081971423300006623SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEEPNEAPLSS
Ga0066665_1004300813300006796SoilMLTQEPTIPICPDCGTRLAGGFSRNLGRCMICLLRVGFDEAEEPNEAPL
Ga0066659_1026461233300006797SoilMQTQATPAATCPQCGTRLEGGFSRNLGRCMICLLRVGFD
Ga0075433_1139699423300006852Populus RhizosphereMQAQATSATVCPECGTRLKGGFSRGLGRCMICLLRVGFDDAEEPDEKLF
Ga0099795_1032145613300007788Vadose Zone SoilMQAQATSAAVCPECGTRLEGGFSRNLERCMICLLRVGF
Ga0111539_1045300333300009094Populus RhizosphereMQAQATSSAVCPECGTRLEGGFSRNLGRCMICLLRLGFDGAEE
Ga0105249_1206180013300009553Switchgrass RhizosphereMQAQATSPAVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEPNEAPLSSVTD
Ga0126374_1178608313300009792Tropical Forest SoilMQTTATNVAVCPECGTRLAGGFSRGLGRCMICLLRVGFDDAEEPDEKLFAP
Ga0126384_1103147313300010046Tropical Forest SoilMEAQATSAAVCPECGTRLSGAFSRGLGRCMICLLRVGIEDAEEA
Ga0134109_1001117813300010320Grasslands SoilMRVQATSAAVCPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDETL
Ga0134111_1022634113300010329Grasslands SoilMQAQATSAAVCPECGTRLEGGFSPNLGRCMICLLRVGFDGAEEPNEALLSS
Ga0134111_1029478013300010329Grasslands SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEEPNEAPLSS
Ga0134080_1022294813300010333Grasslands SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEEP
Ga0126376_1178616223300010359Tropical Forest SoilMQAQATSAAVCPECETRLEGAFSRGLGRCMICLLRVGF
Ga0126379_1101181313300010366Tropical Forest SoilMQAQATSTAVCPECGTRLEGGFSRSLGRCMICLLRVGFDDVEELNEA
Ga0137364_1027534633300012198Vadose Zone SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEEPNE
Ga0137399_1012810743300012203Vadose Zone SoilMQAQATSAAVCPECGTRLEGGFSRNLERCMICLLRVGFGGSEEPDEAPLSSVAD
Ga0137380_1092444713300012206Vadose Zone SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEK
Ga0137377_1015778843300012211Vadose Zone SoilMLTQEPTKPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDETLSAPV
Ga0137372_1034346433300012350Vadose Zone SoilMQAQATSAAVCPGCGTRLEGAFSRGLGRCMICLLRVGFDDAEEPDEA
Ga0137386_1050302023300012351Vadose Zone SoilMLTQEPTIPICPECGTRLEEAFSRGLGRCMICVLRVGFADAEEPHE
Ga0137367_1073487823300012353Vadose Zone SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDGAEESNEA
Ga0137366_1016702913300012354Vadose Zone SoilMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDETLFAPVAD
Ga0137371_1064967823300012356Vadose Zone SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAE
Ga0137368_1035188423300012358Vadose Zone SoilMQAQANSAAVCPECGTRLEGGFSRNLGRCMICLLRVGF
Ga0137360_1030126313300012361Vadose Zone SoilMLTQEPTIPICPECGTRLEEAFSRGLGRCMICLLRVGFDDAEEPNEAPLSSV
Ga0157285_1016692113300012897SoilMQAQATNLAVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAEESYETLFV
Ga0157295_1032511313300012906SoilMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLR
Ga0137359_1043270613300012923Vadose Zone SoilMQAQATSAAVCPECGTRLDGGFSRNLGRCMICLLRVGFDDAEEPNE
Ga0164303_1020411433300012957SoilMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRLGFDDAEDPN
Ga0134076_1029408423300012976Grasslands SoilMQPQATSVGVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAE
Ga0164309_1011054513300012984SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEEPNEAPPSSVA
Ga0164305_1056157323300012989SoilMQAQATSAEVCPECGTPLAGGFSRGLGRCMSCLLRVGFDDAEESDETLFAPVT
Ga0157375_1079163133300013308Miscanthus RhizosphereMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRV
Ga0157376_1029221533300014969Miscanthus RhizosphereMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVG
Ga0134072_1036286123300015357Grasslands SoilMQPQATSVGVCPECGARLEGGFSRNLGRCMICLLRVGFDDAEEPNEAPLSSV
Ga0132256_10337960123300015372Arabidopsis RhizosphereMQAQATSATVCPECGTRLEGGFSRNLGRCMICLLRVGFDGAE
Ga0182036_1038103823300016270SoilMQAQATSVAVCPECGTRLQGGFSPNLGRCMICLLRLGFDDLEEPNEARFLP
Ga0184619_1007592213300018061Groundwater SedimentMLTQEPTIPICPDCGTRLEGGFSPGLGRCMICLLRVGLE
Ga0066667_1076560313300018433Grasslands SoilMRAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRIGFDDAEEPDETL
Ga0066667_1129094413300018433Grasslands SoilMLTQEPTIPICPECGTRLEGGFSRNLGRCMICLLRVGFDD
Ga0066667_1197169913300018433Grasslands SoilMQPQATSVGVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEP
Ga0066669_1102786513300018482Grasslands SoilMQTQATPAATCPECGTRLEGGFSHNLGRCMICLLRVG
Ga0193700_105322823300019873SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEEP
Ga0193701_107435823300019875SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEAPNEAPLS
Ga0193725_104255013300019883SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDETL
Ga0193727_103163113300019886SoilMQAQATSAMVCPECGTRLDGGFSRNLGRCMICLLRVGFDDAEEPD
Ga0193729_108628523300019887SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDEALLTPV
Ga0193729_115149323300019887SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRLGFDGADEPDE
Ga0193728_106750633300019890SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEEPNEAP
Ga0193693_102148533300019996SoilMQAQATGAAAVCPECGTRLEGGFSRNLGRCMICLLRVGFDGAEEPNEAPPSSV
Ga0193755_110478023300020004SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEEPNEAPLSSVAD
Ga0193733_114965213300020022SoilMLTQEPTIPICPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEP
Ga0193724_100567713300020062SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEEPNEAPLSSVADRL
Ga0193719_1002827043300021344SoilMQAQATSVPVCPECGTRLEGGFSRNLGRCMICLLRVGFDGAEEPNEAP
Ga0224452_119693523300022534Groundwater SedimentMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEKP
Ga0224452_127485013300022534Groundwater SedimentMQAQATSVPVCPECGTRLEGGFSRNLGRCMICLLRVGF
Ga0222622_1017294913300022756Groundwater SedimentMQAQATSAAVCPECGTRLKGGFSRGLGRCMICLLRVGFDEA
Ga0207666_108599713300025271Corn, Switchgrass And Miscanthus RhizosphereMQAQATIPAVCPECGTPLTGGFSRGLGRCMICLLRV
Ga0207697_1004640533300025315Corn, Switchgrass And Miscanthus RhizosphereMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDG
Ga0207697_1043024513300025315Corn, Switchgrass And Miscanthus RhizosphereMQAQATSAAVCPECGTRLDGGFSRGLGRCMICLLRVGFDDAEEPN
Ga0207693_1001455513300025915Corn, Switchgrass And Miscanthus RhizosphereMQAQATNVAVCPECGTRLRGGFSRNLGRCMICLLRVGFDD
Ga0207663_1092689713300025916Corn, Switchgrass And Miscanthus RhizosphereMQAQATSAAVCPECGTRLDGGFSRNLGRCMICLLRVGFDDSDES
Ga0207650_1155124913300025925Switchgrass RhizosphereMQAQATSAAVCPECGTRLEGGFSRKLGRCMICLLRVGFDGAEEPNEAPLSFV
Ga0207690_1107650413300025932Corn RhizosphereMQAQATSAAVCPDCGTRLEGGFSRGLGRCMICLLRVGFDDAEEPD
Ga0207706_1106053423300025933Corn RhizosphereMQAQTTSAAVCPECGTRLERGFSRNLGRCMICLLRVG
Ga0207670_1110726413300025936Switchgrass RhizosphereMQAQATNTAVCPECGTRLEGGFSRGLGRCMICLLRVGFDHAEEPDEKLFAPVT
Ga0207665_1060118723300025939Corn, Switchgrass And Miscanthus RhizosphereMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRVGF
Ga0207658_1059455813300025986Switchgrass RhizosphereMLTQEPTIPICPDCRTRLGGGFSRNLGRCMICLLRVGFDDVEE
Ga0207658_1148752323300025986Switchgrass RhizosphereMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRVGFDDA
Ga0209375_103702643300026329SoilMQAQATSVGVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEPNE
Ga0209160_131388123300026532SoilMQAQATNAAVCPECGTRLEGGFSRNLGRCMICLLRIG
Ga0179587_1011784613300026557Vadose Zone SoilMLTEESTVPICPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEPDETLFA
Ga0208579_10321623300026689SoilMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRVGFDDAEEPYETLFAP
Ga0207603_10511023300026820SoilMQAQATSAAVCPECGTRLEEGFSRGLRRCMICLLRVGFDEAEEPDETLFAPVA
Ga0209069_1095848413300027915WatershedsMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDA
Ga0268266_1149461813300028379Switchgrass RhizosphereMQAQATSAAVCPECGTRLDGGFSRGLGRCMICLLRVGFDDAEEPNEAA
Ga0268266_1222331923300028379Switchgrass RhizosphereMQAQSTSAAVCPECGTRLEGAFSRKLGRCMICLLRVGFGSAEEPNEG
Ga0268264_1232356013300028381Switchgrass RhizosphereMLTQEPTIPICPDCGTRLGGGFSRNLGRCMICLLRVGFDDVEEPNEAP
Ga0247822_1132909413300028592SoilMQAQATSAAVCPECGTRLEGGFSRGLGRCMICLLRVGFDDAEKPDETLFAPV
Ga0307305_1057738713300028807SoilMQAQATSAAVCPECGTRLEEGFSRGLGRCMICLLRVGFDDAEEP
Ga0307304_1037328313300028885SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDAEEPNEAPLSSVTDRL
Ga0307498_1015507513300031170SoilMQAKATSAAVCPECGTRLAGGFSRNLGRCMICLLRVGFDDAEEP
Ga0170820_1593907423300031446Forest SoilMQAQAKSAVVCPECGTRLAGGFSRGLGRCMICLLRVGFDDAEEANE
Ga0310915_1096916123300031573SoilMQAQATSAAVCPECGTRLQGGFSPNLGRCMICLLRLGFDDVEEP
Ga0306917_1012226543300031719SoilMQAQATTAAVCPECGTRLQGGFSPNLGRCMICLLRLGFDDLEEPNEARFLP
Ga0307469_1170001723300031720Hardwood Forest SoilMLTQEPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEEPNEAPPSSV
Ga0307469_1213461113300031720Hardwood Forest SoilMQAQATSAAVCPECGTRLEGAFSRGLGRCMICLLRVGFDDAEEPNEALLSSVAD
Ga0310904_1078588913300031854SoilMLTREPTIPICPDCGTRLEGGFSRNLGRCMICLLRVGFDDVEEPN
Ga0306923_1205823323300031910SoilMQAQATTAAVCPECGTRLQGGFSPNLGRCMICLLRLGFDDLEE
Ga0306921_1023370913300031912SoilQAQATTAAVCPECGTRLQGGFSPNLGRCMICLLRLGFDDLEEPNEARFLP
Ga0306921_1190672913300031912SoilMQSQATSVAVCPECGTRLKEGFSRGLGRCMICLLRVGFDDAEEPDEKLFAPVT
Ga0310910_1071086613300031946SoilMQAQATTAAVCPECGTRLQGGFSPNLGRCMICLLRLGFDEVEEPNEAPL
Ga0308176_1143257723300031996SoilMQAQATSAAVCPECGTRLEGGFSRGLERCMICLLRVGFDE
Ga0306922_1014571413300032001SoilMQAQATSAAVCPECGTRLQGGFSPNLGRCMICLLRLGFDDLEEPNEARFLP
Ga0306924_1015422543300032076SoilMQAQATTAAVCPECGTRLQGGFSPNLGRCMICLLRLGFDDVEEPNEAP
Ga0307470_1123001913300032174Hardwood Forest SoilMQAQATSAAVCPECGTRLEGAFSRGLGRCMICLLRVGFDDAKEP
Ga0315273_1272979613300032516SedimentMQAQATSAAVCPECGTRLEGGFSRNLGRCMICLLRVGFDGAEE
Ga0310810_1038971513300033412SoilMQAQATNAAVCPDCGTRLAGGFSRNLGRCMICLLRVGFDDAEEPDDTLFALV
Ga0310810_1051320013300033412SoilMQAQATNVAVCPECGTRLEGGFSRNLGRCMICLLRVGFDDTKEPDEK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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