Metagenome / Metatranscriptome Family F072103

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072103
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	99 residues
Representative Sequence	MSTILDTVVGYEDQVIDYVKQAKKPVVEYVAKGVELVGDRLPEVTYPTSLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVAGFAKPKKVVKAAKAA
Number of Associated Samples	78
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.69 %
% of genes near scaffold ends (potentially truncated)	25.62 %
% of genes from short scaffolds (< 2000 bps)	79.34 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.851 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (42.975 % of family members)
Environment Ontology (ENVO)	Unclassified (40.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.149 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.26% β-sheet: 0.00% Coil/Unstructured: 45.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00578	AhpC-TSA	15.70
PF01381	HTH_3	11.57
PF10417	1-cysPrx_C	8.26
PF16916	ZT_dimer	2.48
PF00067	p450	2.48
PF01545	Cation_efflux	1.65
PF03704	BTAD	1.65
PF00903	Glyoxalase	0.83
PF06999	Suc_Fer-like	0.83
PF00717	Peptidase_S24	0.83
PF02600	DsbB	0.83
PF05661	DUF808	0.83
PF13193	AMP-binding_C	0.83
PF13560	HTH_31	0.83
PF13424	TPR_12	0.83
PF13532	2OG-FeII_Oxy_2	0.83
PF13191	AAA_16	0.83
PF10118	Metal_hydrol	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	2.48
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.65
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.65
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.65
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.65
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.65
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2354	Membrane protein MutK/YedI, may be involved in DNA repair	Replication, recombination and repair [L]	0.83
COG4759	Uncharacterized conserved protein, contains thioredoxin-like domain	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
All Organisms	root	All Organisms	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
cellular organisms	root	All Organisms → cellular organisms	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	4.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	4.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.48 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	2.48 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.48 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.65 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	1.65 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	0.83 %
Microthrixaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	2.48 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.65 %
Iamia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia	0.83 %
Rhabdothermincola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola	0.83 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Candidatus Microthrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Pseudomonas mandelii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	2.48 %
Mycobacterium talmoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1.65 %
Rhabdothermincola sediminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola sediminis	0.83 %
unclassified Iamia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia	0.83 %
Streptomyces prunicolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces prunicolor	0.83 %
Candidatus Microthrix parvicella	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	0.83 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Pseudomonas mandelii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	2.48 %
Mycobacterium talmoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1.65 %
Iamia sp. SCSIO 61187	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	0.83 %
Rhabdothermincola sediminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola sediminis	0.83 %
Streptomyces prunicolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces prunicolor	0.83 %
Candidatus Microthrix parvicella	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	0.83 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_10036983	Not Available	635	Open in IMG/M
3300000956\|JGI10216J12902_112022615	Not Available	772	Open in IMG/M
3300003312\|P12013IDBA_1005972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6677	Open in IMG/M
3300003315\|P22013IDBA_10006278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	6637	Open in IMG/M
3300003970\|Ga0063602_123992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces prunicolor	687	Open in IMG/M
3300004114\|Ga0062593_100771536	Not Available	951	Open in IMG/M
3300004114\|Ga0062593_100995961	Not Available	859	Open in IMG/M
3300004114\|Ga0062593_102661758	Not Available	569	Open in IMG/M
3300004156\|Ga0062589_100377919	Not Available	1139	Open in IMG/M
3300004157\|Ga0062590_100086448	Not Available	1925	Open in IMG/M
3300004157\|Ga0062590_101249014	Not Available	728	Open in IMG/M
3300004463\|Ga0063356_103695159	Not Available	659	Open in IMG/M
3300004480\|Ga0062592_100950907	Not Available	780	Open in IMG/M
3300004643\|Ga0062591_101512787	Not Available	672	Open in IMG/M
3300004778\|Ga0062383_10005891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3795	Open in IMG/M
3300004778\|Ga0062383_10740060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	504	Open in IMG/M
3300005045\|Ga0071328_135137	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300006038\|Ga0075365_10871542	Not Available	635	Open in IMG/M
3300006038\|Ga0075365_11029398	Not Available	580	Open in IMG/M
3300006046\|Ga0066652_101514225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	621	Open in IMG/M
3300006048\|Ga0075363_100711817	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300006804\|Ga0079221_11643595	Not Available	521	Open in IMG/M
3300006894\|Ga0079215_10371615	Not Available	829	Open in IMG/M
3300007521\|Ga0105044_10008149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14399	Open in IMG/M
3300009053\|Ga0105095_10349426	Not Available	814	Open in IMG/M
3300009094\|Ga0111539_13525000	Not Available	502	Open in IMG/M
3300009095\|Ga0079224_104820707	Not Available	525	Open in IMG/M
3300009166\|Ga0105100_10280843	Not Available	997	Open in IMG/M
3300012043\|Ga0136631_10304297	Not Available	635	Open in IMG/M
3300012046\|Ga0136634_10056827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300012188\|Ga0136618_10006596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	5012	Open in IMG/M
3300012526\|Ga0136637_1209233	Not Available	672	Open in IMG/M
3300012527\|Ga0136633_1001513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17084	Open in IMG/M
3300012527\|Ga0136633_1224008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	696	Open in IMG/M
3300012530\|Ga0136635_10037406	Not Available	1452	Open in IMG/M
3300012531\|Ga0136640_10386605	Not Available	588	Open in IMG/M
3300012668\|Ga0157216_10019411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3565	Open in IMG/M
3300012682\|Ga0136611_10908212	Not Available	524	Open in IMG/M
3300012903\|Ga0157289_10351097	Not Available	539	Open in IMG/M
3300012907\|Ga0157283_10419270	Not Available	503	Open in IMG/M
3300014326\|Ga0157380_12688588	Not Available	564	Open in IMG/M
3300015201\|Ga0173478_10282802	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300017548\|Ga0182743_1077429	Not Available	1275	Open in IMG/M
3300017646\|Ga0182737_1040557	Not Available	1371	Open in IMG/M
3300017695\|Ga0180121_10006480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4470	Open in IMG/M
3300017695\|Ga0180121_10103870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300017787\|Ga0183260_10294043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300017787\|Ga0183260_10844024	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300018067\|Ga0184611_1310608	Not Available	546	Open in IMG/M
3300018073\|Ga0184624_10088969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1309	Open in IMG/M
3300018422\|Ga0190265_10004673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9551	Open in IMG/M
3300018422\|Ga0190265_10055203	Not Available	3493	Open in IMG/M
3300018422\|Ga0190265_10921039	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300018422\|Ga0190265_11684559	Not Available	744	Open in IMG/M
3300018422\|Ga0190265_12629858	Not Available	600	Open in IMG/M
3300018429\|Ga0190272_10717772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	903	Open in IMG/M
3300018429\|Ga0190272_10815818	Not Available	861	Open in IMG/M
3300018429\|Ga0190272_10835169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300018429\|Ga0190272_11097417	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300018432\|Ga0190275_10848933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300018432\|Ga0190275_12220707	Not Available	627	Open in IMG/M
3300018432\|Ga0190275_12682619	Not Available	575	Open in IMG/M
3300018432\|Ga0190275_12770508	Not Available	566	Open in IMG/M
3300018465\|Ga0190269_10010970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4065	Open in IMG/M
3300018465\|Ga0190269_10033817	Not Available	2326	Open in IMG/M
3300018465\|Ga0190269_10045727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2010	Open in IMG/M
3300018465\|Ga0190269_10076847	Not Available	1588	Open in IMG/M
3300018465\|Ga0190269_10486017	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300018465\|Ga0190269_10766630	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300018465\|Ga0190269_11686340	Not Available	534	Open in IMG/M
3300018466\|Ga0190268_11075446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300018466\|Ga0190268_11499870	Not Available	586	Open in IMG/M
3300018469\|Ga0190270_10057814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2742	Open in IMG/M
3300018469\|Ga0190270_10162438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1833	Open in IMG/M
3300018469\|Ga0190270_11003812	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300018476\|Ga0190274_11213114	Not Available	838	Open in IMG/M
3300018476\|Ga0190274_11828690	Not Available	702	Open in IMG/M
3300018476\|Ga0190274_12612655	Not Available	602	Open in IMG/M
3300018476\|Ga0190274_13805006	Not Available	511	Open in IMG/M
3300018481\|Ga0190271_10121453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2459	Open in IMG/M
3300018481\|Ga0190271_10172915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2116	Open in IMG/M
3300018481\|Ga0190271_10426601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1426	Open in IMG/M
3300018481\|Ga0190271_10529701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300018481\|Ga0190271_10672589	Not Available	1157	Open in IMG/M
3300018481\|Ga0190271_11144190	Not Available	901	Open in IMG/M
3300018481\|Ga0190271_12260531	Not Available	649	Open in IMG/M
3300018481\|Ga0190271_13575996	Not Available	520	Open in IMG/M
3300018920\|Ga0190273_11649750	Not Available	575	Open in IMG/M
3300018920\|Ga0190273_12010703	Not Available	535	Open in IMG/M
3300018920\|Ga0190273_12032782	Not Available	533	Open in IMG/M
3300019377\|Ga0190264_10022511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	2149	Open in IMG/M
3300019377\|Ga0190264_11299930	Not Available	614	Open in IMG/M
3300019377\|Ga0190264_11552700	Not Available	579	Open in IMG/M
3300019377\|Ga0190264_11844150	Not Available	546	Open in IMG/M
3300019767\|Ga0190267_10511603	Not Available	713	Open in IMG/M
3300021432\|Ga0210384_10671312	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300022309\|Ga0224510_10047677	Not Available	2291	Open in IMG/M
3300022886\|Ga0247746_1158592	Not Available	580	Open in IMG/M
3300027831\|Ga0209797_10024455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola sediminis	2754	Open in IMG/M
3300027850\|Ga0209591_10022939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	6347	Open in IMG/M
3300027900\|Ga0209253_10856536	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300028802\|Ga0307503_10308815	Not Available	796	Open in IMG/M
3300028812\|Ga0247825_10749281	Not Available	704	Open in IMG/M
3300030336\|Ga0247826_10265289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1213	Open in IMG/M
3300030619\|Ga0268386_10775486	Not Available	616	Open in IMG/M
3300030619\|Ga0268386_10960358	Not Available	530	Open in IMG/M
3300031054\|Ga0102746_10328344	Not Available	635	Open in IMG/M
3300031228\|Ga0299914_10102380	Not Available	2515	Open in IMG/M
3300031229\|Ga0299913_10620524	Not Available	1063	Open in IMG/M
3300031481\|Ga0314816_1059007	Not Available	519	Open in IMG/M
3300031576\|Ga0247727_10000215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	135648	Open in IMG/M
3300031911\|Ga0307412_10358179	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300031965\|Ga0326597_10123202	All Organisms → cellular organisms → Bacteria	3131	Open in IMG/M
3300031995\|Ga0307409_102955602	Not Available	502	Open in IMG/M
3300032002\|Ga0307416_101130630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	888	Open in IMG/M
3300032005\|Ga0307411_11250583	Not Available	675	Open in IMG/M
3300032013\|Ga0310906_10959046	Not Available	613	Open in IMG/M
3300032126\|Ga0307415_100835533	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300032275\|Ga0315270_10243290	Not Available	1115	Open in IMG/M
3300033407\|Ga0214472_10573261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1039	Open in IMG/M
3300033417\|Ga0214471_10088863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.91%
Host-Associated	Host-Associated	9.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.59%
Aquatic	Environmental → Aquatic	22.31%
Plants	Host-Associated → Plants	9.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.77%
Freshwater	Environmental → Aquatic → Freshwater	19.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.79%
Roots	Host-Associated → Plants → Roots	2.48%
Sediment	Environmental → Aquatic → Sediment	1.65%
Marine	Environmental → Aquatic → Marine	0.83%
Cave	Environmental → Terrestrial → Cave	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.77%
Ice	Environmental → Aquatic → Freshwater → Ice	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.48%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Sediment	Environmental → Aquatic → Marine → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.11%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	10.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.48%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	42.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	10.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.31%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.48%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.65%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.83%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003312	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P1 sample	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300003970	Enrichment cultures from Lake Fryxell 39872	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300017548	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C Kraft OP (version 2)	Environmental	Open in IMG/M
3300017646	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031481	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_100369832	3300000890	Soil	MTTILEAVESYEGQLIELVKKAQAPVVEYVTKGVELVGDRLPEVAYPTSAPTPIEVVESQVAFVKQLIDANTAIVTSVLETVAPLAGYAKPAKRSTKAPKAA*
JGI10216J12902_1120226153	3300000956	Soil	MSTILTTVESYEKQLLDLVNKAQAPVVDYVAKGVELVGDRLPEVTYPSALPTPIEVVKSQAAFAKKMIDANAAFVTAVLETVAPIAGFAAPKKVVKAATKAA*
P12013IDBA_10059723	3300003312	Ore Pile And Mine Drainage Contaminated Soil	MPKILETVVSYENQLVDYVKQVQEPVTGYVAKGVQLLEARVPEVRYPSGVATPIEVVETQVAFAKKMIDANAALVTAVLKTVAPLGGYPTTTKKVVKAAKAA*
P22013IDBA_100062784	3300003315	Ore Pile And Mine Drainage Contaminated Soil	MSTILDTVESYESQLLDLVKKAQAPVVDTVAKGVELVAGRLPDVTYPAALPTPIEVVESQVAFAKKLIDANTAFVTSVLETVAPVAGYAKPKKVAKAAKAA*
Ga0063602_1239921	3300003970	Freshwater	MTTILDTVVSYEDQLVDFVKKAQSPVVEYVAKGVELVEDRLPEVTYPTSLPTPIEVVETQVAFAKKLIDANTALVTAVLETVAPVAGFAKPKKVVKAAKAA*
Ga0062593_1007715362	3300004114	Soil	MSTILTTVEGYEDKVLELVKNAKAPVVEYVGKGVELVGDRSLTYPASLPTPIEVVKSQTAFAKKLIDANTALVTAVLETIAPVVGYKATKAAKPAVKAA*
Ga0062593_1009959611	3300004114	Soil	MSTILSTVEGYEDQILKFVKDAKGPVVEYVAKGVDLVGERLPSVTYPEGLATPIEVVESQTAFVKKLIDANTAIVTAVLETVAPLAGYKTKKAAKPAVKAA*
Ga0062593_1026617581	3300004114	Soil	MSNFLTTVERYEDQVLDFVKKAKAPVVDYVAKGVDLAEGRLPEVTYPASLPTPIEVVKSQVSFTKKLIDANTAIVVAVLETVAPVAGYATPKKVVKAANAA*
Ga0062589_1003779191	3300004156	Soil	MSTILSTVEGYEDQILKLVKDAKTPVVEYVTKGVELVGDRLPSVTYPEALATPIEVVESQTAFVKKLIDANAALVKAVLEVVAPIAGYPTKKATKPAVKAA*
Ga0062590_1000864482	3300004157	Soil	MSTILTTVEGYEDQILKAVKDAKPTVVEYVAKGVELVGDRLPSVTYPASLATPIEVVESQTAFVKKLIDANAAIVTAVLETVAPLAGYKTKKASKPAVKAA*
Ga0062590_1012490142	3300004157	Soil	MSTFLTTVEDYENQILQAVKDAKPTVVEYVAKGVELVGDRAPSVTYPASLPTPIEVVESQTAFVKKLIDANTAIVTAVLETVAPLAGYKTKKAAKPAVKAA*
Ga0063356_1036951592	3300004463	Arabidopsis Thaliana Rhizosphere	ILKLVKDAKTPVVEYVTKGVELVGDRLPSVTYPQALATPIEVVESQTAFVKKLIDANTAIVTAVLEVVAPLAGYKTKKATKAAAVKAA*
Ga0062592_1009509072	3300004480	Soil	MSNILSTVERYEDQVLDFVKRAKSPVVEYVAKGVDLAEGRLPEVTYPASLPTPIEVVKSQVTFTKKLIDANTAIVVAVLET
Ga0062591_1015127872	3300004643	Soil	MSTFLTTVEDYENQILQAVKDAKPTVVEYVAKGVELVGDRLPSVTYPASLATPIEVVESQTAFVKKLIDANAAIVTAVLETVAPLAGYKTKKASKPAVKAA*
Ga0062383_100058914	3300004778	Wetland Sediment	MSTILHKVEGYEDQVIDFMHKSKTPVVDFVAKGVDVVGERLPSFTYPKTMATPIEVVESQVAFAKKFIDANTAIVTAVLETVAPVVGYKTKKVVRAAKAA*
Ga0062383_107400601	3300004778	Wetland Sediment	MSTILSTVESYEDRVIDFVHKAKSPVVDYVAKGVDFVGDRLPSVTYPESLATPIEVVESQVAFAKRLIDANTAIVTAVLETVAPVAGYKTKKVVRAAKAA*
Ga0071328_1351373	3300005045	Permafrost	MSTILSTVESYEDQVIDLVTKAKTPVVEYVAKGVELVGDRLPSVTYPTSLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVVGYAKPKKVVKAAKAA*
Ga0075365_108715421	3300006038	Populus Endosphere	MSTILNTVEGYEDQVLKFVKDAKPTVVDYVAKGVELVGDRLPAVSYPESLPTPIEVVESQTAFVKKLIDANTAIVTAVLETVAPLAGYKTKKAAKPAVKAA*
Ga0075365_110293981	3300006038	Populus Endosphere	MSTILDTVVEYEDKVLALVKDAKKPVVEYVSKGVELVDGRLPEVTYPEFLASPLDVVSTQVAFAKKMIDANAAIVTAILETVAPVLGYPTKKVVKAAATKAA*
Ga0066652_1015142252	3300006046	Soil	VKSAKAPVVEYVGKGVELVGDRSLAYPASLPTPIEVVKSQTAFAKKLIDANTALVTAVLETIAPVVGYKATKATKPAVKAA*
Ga0075363_1007118171	3300006048	Populus Endosphere	MSTILKTVESYEDQVIDLVNKAKSPVVDYVAKGVELVGDRLPAVTYPTSLPTPIEVVESQVKFAKKLIDANTAIVTAVLETVAPVAGFAKPKKVVKAATKAA*
Ga0079221_116435952	3300006804	Agricultural Soil	VKDAKTPVVEYVTKGVELVGDRLPSVTYPEALATPIEVVESQTAFVKKLIDANAALVKAVLEVVAPIAGYPTKKATKPAVKAA*
Ga0079215_103716152	3300006894	Agricultural Soil	MSTILNTVESYESQLLELVNKAQAPVVEYVAKGVELVSDRLPDVTYPSALPTPIEVVESQVAFAKKLIDANTAFVTAVLETVAPIAGYAKPKKVVKAATKAA*
Ga0105044_100081493	3300007521	Freshwater	MSTILDTVVGYEDQIIGFVKSAKTPVVTYVAKGVELVEDRLPKVTYPKAFPTPIEVVETQVAFAKKLIDANAAIMTAVLVTVAPVAGYQAKKVVRAAKAA*
Ga0105095_103494262	3300009053	Freshwater Sediment	MLDIVSAELPLPPHPPKEHLMSNYLTTVEDYEDKVLDFVKKAKGPVVEYVAKGVDLVEDRLPDVTYPASLPTPIEVVKSQVTFTKKLIDANAAIVVAVLETVAPVAGYATPKKVVKAASAA*
Ga0111539_135250001	3300009094	Populus Rhizosphere	MSTILTTVEGYEDQVLNAVKDVKPTIVEYVAKGVELVGDRLPSVTYPESLATPIEVVESQTAFVKKLIDANTAIVTAVLETVAPVAGFAKPKKVVKAATKAA*
Ga0079224_1048207071	3300009095	Agricultural Soil	MSTILDTVETYEAQLLDFVKKAQKPVVDAVAKGVELVDGRIPAVTYPAALPTPIEVVESQTAFAKKLIDANAKIVTSVLSTVAPVAGYSAKKATKASKAAKAA*
Ga0105100_102808432	3300009166	Freshwater Sediment	MLDIVSAELPLSPPPKEHVMSNYLTTLEDYEDKVLDFVKKAKGPVVEYVAKGVDLVEDRLPDVTYPESLPTPIEVVKSQVTFTKKLIDANAAIVVAVLETVAPVAGYATPKKVVKAA*
Ga0136631_103042972	3300012043	Polar Desert Sand	VVDYEDQILDLVKKAKSPVVEYVAKGVDLVGDRLPAVSYPTALPTPIEVVETQVIFAKKLLDANAAILTAVFKTTAPVLGYSATSRKPVVKAAKAAKAA*
Ga0136634_100568272	3300012046	Polar Desert Sand	MRTILDTVVDYEDQILVLVKKAKSPVVDYVAKGVDLVGDRLPAVSYPTAFPTPIEVVETQVIFAKKLIDANAAILTAVLKTTAPVAGYSTTSRKPVVKAAKAA*
Ga0136618_100065963	3300012188	Polar Desert Sand	MRTILDTVVDYEDQILDLVKKAKSPVVEYVAKGVDLVGDRLPAVSYPTALPTPIEVVETQVIFAKKLLDANAAILTAVLKTTAPVGGYSTTSRKPVVKAAKAVKAAKAA*
Ga0136637_12092331	3300012526	Polar Desert Sand	EDQILDLVKKAKSPVVEYVAKGVDLIGDRLPAVSYPTALPTPIEVVETQVIFAKKLLDANAAILTAVLKTTAPVGGYSTTSRKPVAKAAKAA*
Ga0136633_100151313	3300012527	Polar Desert Sand	MSTILDTVVSYEDQVIELVKKAKAPVVGYVAKGVELVGDRLPSVTYPTSLPTPFEVVETQVAFAKKLIDANTAIVTAVLETVAPVAGFAKPKKVVKAAAAA*
Ga0136633_12240082	3300012527	Polar Desert Sand	MRTILDTVVDYEDQILDLVKKAKSPVVDYVAKGVDLVGDRLPAVSYPTALPTPIEVVETQVIFAKKLLDANAAILTAVFETVAPVAGYRTTSRKPVVKAAKAA*
Ga0136635_100374062	3300012530	Polar Desert Sand	MSTILSTVESYEDQVIDLVKKAKTPVVEYVAKGVELVGDRLPSVTYPTSLPTPIEVVESQVAVAKRLMDANTAIVTAVLETLAPVVGYAKPRKRVKAAKAA*
Ga0136640_103866051	3300012531	Polar Desert Sand	VRTILDTVVDYEDQILDLVKKAKSPVVDYVAKGVDLVGDRLPAVSYPTALPTPIEVVETQVIFAKKLLDANAAILTAVLKTAAPVAGYSTTSRKPVVKAAKAA*
Ga0157216_100194111	3300012668	Glacier Forefield Soil	MSTILDTVVTYEDQLIDLVKKAKTPVVTYVAKGVELVSARIPAVTYPASLPTPIEVVESQVKFAKQLIDANTAIVTSVLETVAPIAGFAKPAKKVAKTVKAA*
Ga0136611_109082121	3300012682	Polar Desert Sand	ILDTVVGYEDQILDLVKKAKSPVVDYVAKGVDLVGDRLPAMSYPTALPTPLEVVETQAVFAKKLIDANSAILTAVFETVAPVAGYRATSRKPVVKAAKAA*
Ga0157289_103510971	3300012903	Soil	DKVLELVKNAKAPVVEYVGKGVELVGDRSLTYPASLPTPIEVVKSQTAFAKKLIDANTALVTAVLETIAPVVGYKATKAAKPAVKAA*
Ga0157283_104192701	3300012907	Soil	TVEGYEDQILKLVKDAKTPVVEYVTKGVELVGDRLPSVTYPEALATPIEVVKSQTAFAKKLIDANTALVTAVLETIAPVVGYKATKAAKPAVKAA*
Ga0157380_126885882	3300014326	Switchgrass Rhizosphere	MSTILTTVEGYDDKVLEFVKNAKAPVVEYVGKGVELVGDSSLTYPASLPTPIEVVKSQTAFVKKLIDANTALVTAVLETVAPVVGFKTTKAAKPAVKAA*
Ga0173478_102828022	3300015201	Soil	MSTILTTVEGYEDKVLELVKSAKAPVVEYVGKGVELVGDRSLAYPESLPTPIEVVKSQTAFVKKLIDANTAIVTAVLETVAPVVGFKTTKAAKPAVKAA*
Ga0182743_10774291	3300017548	Compost	MTTILDTVENYEAQLLDLVKKTQAPVVGYVAKGVELVGDRLPSVSYPKALPTPIEVVESQVAFAKKLIDVNTAIVTSVLETVAPVAGYAKPKKV
Ga0182737_10405573	3300017646	Compost	MTTILDTVENYEAQLLDLVKKTQAPVVGYVAKGVELVGDRLPSVSYPKALPTPIEVVESQVAFAKKLIDVNTAIVTSVLETVAPVAGYAKPKKVAKAKAA
Ga0180121_100064803	3300017695	Polar Desert Sand	MSTILSTVESYEDQVIDLVKKAKTPVVEYVAKGVELVGDRLPSVTYPTSLPTPIEVVESQVAVAKRLMDANTAIVTAVLETLAPVVGYAKPRKRVKAAKAA
Ga0180121_101038703	3300017695	Polar Desert Sand	LDLVKKAKSPVVEYVAKGVDLVGDRLPTVSYPTALPTPIEVVETQVVFAKKLLDANAAILTAVLKTTAPVLGYSTTSRKPVLKAAKAA
Ga0183260_102940431	3300017787	Polar Desert Sand	TILDTVVSYEDQVIELVKKAKAPVVDYVAKGVELVGDRLPGVTYPTSLPTPIEVVETQVAFAKKLIDANTAIVTAVLETVAPVAGYAKPKKVVKAATAA
Ga0183260_108440242	3300017787	Polar Desert Sand	MRTILDTVVDYEDQILDLVKKAKSPVVEYVAKGVDLVGDRLPAVSYPTALPTPIEVVETQVIFAKKLLDANAAILTAVFKTTAPVGGYSTTSRKPVVKAAKAAKAAKA
Ga0184611_13106081	3300018067	Groundwater Sediment	MSTILTTVEGYEDKVLDFVKNAKAPVVEYVGKGVELVGDRSLSYPESLPTPIEVVKSQTAFVKKLIDANTAIVTAVLETVAPLAGYKTKKAAKPAVKAA
Ga0184624_100889692	3300018073	Groundwater Sediment	LDFVKNAKAPVVEYVGKGVELVGDRSLSYPESLPTPIEVVKSQTAFVKKLIDANTAIVTAVLETVAPVVGFKTTKAAKPAVKAA
Ga0190265_100046738	3300018422	Soil	MSTILDSVVSYEDQIVDFVKQAKKPVVEYVSKGVDLVEGRLPEVSYPSVLPTPIEVVESQATFAKKLIDANTALVTAVLKTIAPVIGTQGPSVKAAATKAA
Ga0190265_100552031	3300018422	Soil	MSNFLSTVEGYEDKVLDIVEGTKAPVVDYVAKGVDLVGDRIPAVSYPEFLPNPIDVVKSQTAFAKKLIDANAVIVTAVLETVAPVAGFKATKVTKPAVKAA
Ga0190265_109210391	3300018422	Soil	MSTILSTVEGYEDQVVGLVTKAKDPVVEYVAKGVELIGDRLPAVTYPTSLPTPIEVVESQVKFAKKLIDANSALVTAVLETVAPVAGYKTKKVVKPAATKAA
Ga0190265_116845592	3300018422	Soil	MSTILSTVEGYEDQVLELVKGTKGPVVEYVAKGVELVGDRAPEFTLPEFLPNPIEVVQSQAKFVKQLIDANTAIVTAVLETVAPVAGFNGKKAVKPAVKAA
Ga0190265_126298581	3300018422	Soil	STILNTVESYEDQVIDLVKRAKSPVVEYVAKGVELVGDRLPDVTYPSALPTPIEVVESQVAFAKKLIDANTAFVTAVLETVAPIAGYAKPKKVVKAATKAA
Ga0190272_107177722	3300018429	Soil	MSTILSTVESYEDQVIDLVNKAQAPVVEYVAKGIELVGDRLPAVTYPTALPTPIEVVESQVTFAKKLIDANAAIVTAVLETVAPVAGYAKAKKVVKPAAKAA
Ga0190272_108158181	3300018429	Soil	MSTILSTVESYESQLIDLVNKAQAPVVEYVAKGVELVGDRLPDVTYPSALPTPIEVVESQVAFAKKLIDANTAFVTAVLETVAPIAGYAKPKKVVKAATKAA
Ga0190272_108351691	3300018429	Soil	MSTILNTVEGYEDQVIDLVKRAQSPVVEYVAKGVELVGDRLPAVTYPTSLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVAGYKTKKVVKAAAKAA
Ga0190272_110974171	3300018429	Soil	MSTILDTVVSYEDQIVDFVKQAKKPVVEYVSKGVNAVEGRLPEVSYPSVLPTPIEVVESQAAFAKKLIDANTALVTAILKTIAPVIGTQGPSVKAAATKAA
Ga0190275_108489332	3300018432	Soil	MSTILDTVVSYEDQIIDFVKQAKKPVVEYVGKGVSFVDGRLPEFTYPTALPTPLEVVESQAAFAKKLIDANTALVTAVLKTVAPVMGIEKAKVVKAAEAAA
Ga0190275_122207071	3300018432	Soil	MSTILDTVVSYEGQIIDYVKQAKKPVVEYVSKGVELVEGRLPEVTFPASLPTPTEVVESQAKFAKQLIDANTALVTAVLDTVGPLVGIKKNVVKAASNKAA
Ga0190275_126826191	3300018432	Soil	AERFPLANPKENPPMSTILTTVEDYEGQVLEFVKSAKAPVVEYVAKGVELVGDRLPAVTYPDLLPNPIDVVKSQTAFAKKLIDANAAIVTAVLETVAPVAGFAKTTKASKPVVKAA
Ga0190275_127705081	3300018432	Soil	MSTFLSTVEGYEGQVLELVKSAKAPVVDYVAKGVELVGDRIPDVTYPEFLPNPIEVVRSQTAFAKKMIDANAAIVTAVLETVAPVAGFAKATKASKPAVKAA
Ga0190269_100109702	3300018465	Soil	MTTILDTVETYEKQLLELVGKAKAPVVDYVAKGVELVDGRLPEVTYPKTLPTPLEVVESQAAFAKKLIDANTAIVTAVLETVAPVAGYKVKRAPKAHKAAAPKAA
Ga0190269_100338173	3300018465	Soil	MTTILDTVVSYEDQLIDLVKRAQTPVVDYVAKGVELVGDRLPAVTYPANLPTPIEVVESQVAFAKKLIDANTVLVTSVLETVAPVAGYAKPAKKVTKAPKAA
Ga0190269_100457273	3300018465	Soil	MSNFLDTVVTYEDQLVDLVKKAQAPVVEYVAKGVELVGDRLPELTYPTALPTPIEVVETQVAFAKKLIDANTAIVTSVLETVAPVIGYAKPAKKVAKAAKAA
Ga0190269_100768473	3300018465	Soil	MTTILDTVVSYEDQLIDFVKRAQAPVVDYVAKGVELVGDRLPDVTYPVSLPTPIEVVESQVAFAKKLIDANSALVTSVLETVAPVAGYAKPAKKVTKAAKAA
Ga0190269_104860172	3300018465	Soil	MSTVLDTVVSYEEQIVDLVKQAKKPVTEYVAKGVALVDGRLPEVSYPTSLPTPIEVVESQATFAKKLIDANTALVTAVLKTIAPV
Ga0190269_107666302	3300018465	Soil	ELVGKAKGPVVDYVAKGVELVDGRLPEVTYPKSLPTPLEVVASQARFSKKLIDANAALVTAVLETVAPVAGYAKPKKVTKAAKAA
Ga0190269_116863401	3300018465	Soil	MTTILDTVVSYEDQLIDLVKRAQAPVVDYVAKGVELVGDRLPDVTYPANLPTPIEVVESQVAFAKKLIDANTALVTSVLETVAPVAGYAKPAKKVTKAPKAA
Ga0190268_110754462	3300018466	Soil	MSTILTTVESYEKQLLDLVNKAQAPVVDYVAKGVELVGDRLPSVTYPESLPTPIEVVESQTKFVKQLIDANTAIVTAVLETLAPVVGY
Ga0190268_114998702	3300018466	Soil	MSTILTTVEGYEDQVLDFVNKAQGPVVDYVAKGVELVGDRLPEVTYPASLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPLGGFETKKATRATVKAAA
Ga0190270_100578143	3300018469	Soil	MSTILTTVEGYEDKVLDFVKNAKAPVVEYVGKGVELVGDRSLAYPESLPTPIEVVKSQTAFVKKLIDANTAIVTAVLETIAPVAGFKATKASKPAVKAA
Ga0190270_101624382	3300018469	Soil	MSNILSTVESYEDQVIDFVNKAQGPVVTYVAKGVELVEDRMPAVTYPTNLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVVGYAKPKKVVKAAKAA
Ga0190270_110038122	3300018469	Soil	MSTILTTVEGYEDQVLDFVTKAQGPVVEYVAKGVELVGDRLPEVTYPASLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVAGFAKPKKVVKAAKAA
Ga0190274_112131142	3300018476	Soil	MSNILSTVESYEDQVLDFVSKAQGPVVDYVAKGVELVGDRLPEVTYPTSLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVAGYAKPKKVVKAAKAA
Ga0190274_118286902	3300018476	Soil	MSTILDTVVGYEDQVIEFVKNAKSPIVTYVAKGVDLVEDRLPEVTYPTTFPTPIEVVETQVAFAKKLIDANTAIVTAVLVTVAPVAGYKTKKVVRAAKAA
Ga0190274_126126552	3300018476	Soil	DQIVTFVKDAKKPVVEYVAKGVDFVDGRLPEVAYPTTLPTPLEVVSTQVTFAKKMIDANAAIVTAVLETVAPVLGYPTKKVVKAAPKAA
Ga0190274_138050061	3300018476	Soil	MSTILTTVEGYEDQVLDFVKSTKAPVVEYVSKGVELVGDRVPAITYPEFLPNPIDVVKSQTAFAKKLIDANTAIVTAVLETVAPLAGFDTKKVTKPAVKAA
Ga0190271_101214532	3300018481	Soil	MTTFLDTVVDYEDRIVALIGQAQAPVVDAVAKGVELLEGRVPELTYPASLPTPFQVVDTQAAFAKKLIVANTAVVTAVLETVAPLGGFTKTAKVVKPATKAA
Ga0190271_101729152	3300018481	Soil	MSTILTTVEGYEDKVLDFVKNAKAPVVEYVGKGVELVGDRSLAYPESLPTPIEVVKSQTAFVKKLIDANTAIVTAVLETVAPVVGFKTTKASKPAVKAA
Ga0190271_104266012	3300018481	Soil	MSTILSTVEGYEDKVLELVKNAKAPVVEYVGKGVELVGDRSLSYPESLPSPIEVVKSQTAFAKKLIDANTAIVTAVLDVLAPVVGYQSTKATKPAVKAA
Ga0190271_105297011	3300018481	Soil	MSTILSTVEGYEGQVLEFVKGTKGPVVEYVAKGVELVGDRVPEFTLPDFLPDPIDVVQSQAKFVKQLIDANAVIVTAVLETVAPVAGFTGKKATRPAVKAA
Ga0190271_106725892	3300018481	Soil	MSTILTTVEDYEGKVLEFVKDAKPTVVEYVSKGVELVGDRVPSVTYPESLATPIEVVESQVAFVKKLIDANAAIVTAVLETVAPLAGYKTKKA
Ga0190271_111441902	3300018481	Soil	MTTILDTVVGYEDKVLAFVKDAKKPVVEYVAKGVELVDGRLPEVSYPTALPTPLEVVSTQVLFAKKMIDANAAIMTAVLETVAPVLGYPTKKVVKAAAKAA
Ga0190271_122605311	3300018481	Soil	EDQVLKFVKDAKAPVVDYVSKGVELVGDRLPSVSYPESLPTPIEVVQSQTAFVKKLIDANTAIVTAVLETVAPLAGYPTKKVTKPAVKAA
Ga0190271_135759961	3300018481	Soil	MSTILTTVEGYEDQVLKFVKDAKPTVVDYVSKGVELVGDRLPSVTYPTSLPTPIEVVESQTAFVKKLIDANTAIVTAVLETVAP
Ga0190273_116497501	3300018920	Soil	MSTILDTVVGYEDQIIGFVKDAKKPVVTYVAKGVDFVEGRLPEVTYPSVLPTPIEVVETQVAFAKKLLDANTAIVTAVLETVAPVAGYKGKKAVKVAKAA
Ga0190273_120107031	3300018920	Soil	MSTILSTVESYESQLIDLVNKAQAPVVEYVAKGVELVGDRLPSVTYPTSLPTPIEVVESQVKFAKKLIDANTAIVTAVLETVAPVAGFKTKKVVKAASTKAA
Ga0190273_120327821	3300018920	Soil	MSTILDTVVSYEDQIIDYVKQAKKPVVEYVGKGVKLVEGRLPEFSYPTALPTPLEVVESQAAFAKKLIDANTAIVTAVLKTVAPVIGTEAPKVVKAAAAA
Ga0190264_100225114	3300019377	Soil	MSTILSTVESYESQLLDLVNKAQAPVVEYVAKGVELVSDRLPDVTYPAALPTPIEVVESQVAFAKKLIDANTAFVTAVLETVAPIAGYAKPKKVVKAATKAA
Ga0190264_112999301	3300019377	Soil	MSTILTTVEDYEGKVLDFVKNAKAPVVEYVAKGVELVGDRVPAVTYPEFLANPIDVVKSQTAFAKKLIDANAALVTAVLETVAPVAGFSKKVTKPAVKAA
Ga0190264_115527002	3300019377	Soil	MSTFLSTVEEYEGKVLELVEGTKSPVVDYVSKGVELVGDRVPAISYPEFLPNPIELVQSQAAFAKKLIDANTAIVTAVLETVAPVAGFAKPKKAAKPAVKAA
Ga0190264_118441501	3300019377	Soil	SKSFPTPQGAPPTMSKILDTVVSYDDQIVDYVKQAKKPVVEYVSKGVELAEARLPEVTYPSALPTPTEVVESQAKFAKQLIDANTALVTAVLDTVGPLVGIKKNVVKAASNKAA
Ga0190267_105116031	3300019767	Soil	MSTILTTVESYEKQLLDLVNKAQAPVVEYVAKGVELVGDRLPEVTYPSALPTPIEVVKSQTAFAKKMIDANAAFVTAVLETVAPIAGFAAPKKVVKAATKAA
Ga0210384_106713122	3300021432	Soil	MSTILDTVVSYEDQIVDFVKQAQKPVVEYVAKGVALVEGRLPEVTYPTILPTPLEVVESQSKFAKKLIDANTALATAVLKTVAPVIGTQAPVVKAATKAA
Ga0224510_100476773	3300022309	Sediment	MSTMLKTVVGYEDQIIDFVKRAKDPVVSYVAKGVELVEDRFPEVTYPTSLATPIEVVETQVAFAKKLIDANTAIVTAVLETVAPVA
Ga0247746_11585921	3300022886	Soil	MSTILTTVEGYEDKVLELVKNAKAPVVEYVGKGVELVGDRSLTYPASLPTPIEVVKSQTAFAKKLIDANTALVTAVLETIAPVVGYKATKAAKPAVKAA
Ga0209797_100244553	3300027831	Wetland Sediment	MSTILHKVEGYEDQVIDFMHKSKTPVVDFVAKGVDVVGERLPSFTYPKTMATPIEVVESQVAFAKKFIDANTAIVTAVLETVAPVVGYKTKKVVRAAKAA
Ga0209591_100229393	3300027850	Freshwater	MSTILDTVVGYEDQIIGFVKSAKTPVVTYVAKGVELVEDRLPKVTYPKAFPTPIEVVETQVAFAKKLIDANAAIMTAVLVTVAPVAGYQAKKVVRAAKAA
Ga0209253_108565362	3300027900	Freshwater Lake Sediment	MSSILSTVEHYEDQVLDFVKKAKSPVVEYVAKGVDFVDGRLPEVTYPASLPTPIEVVKSQVTFTKKLIDANAAIVTAVLETVAPVAGYATPKKVVKAA
Ga0307503_103088152	3300028802	Soil	MSTILTTVEGYEDKVLELVKNAKAPVVEYVGKGVELVGDRSLSYPESLPTPIEVVKSQTAFVKKLIDANTAIVTAVLETIAPVV
Ga0247825_107492811	3300028812	Soil	TAMSNFLTTVERYEDQVLDFVKKAKAPVVDYVAKGVDLAEGRLPEVTYPASLPTPIEVVKSQVSFTKKLIDANTAIVVAVLETVAPVAGYATPKKVVKAANAA
Ga0247826_102652891	3300030336	Soil	MSNFLTTVERYEDQVLDFVKKAKAPVVDYVAKGVDLAEGRLPEVTYPASLPTPIEVVKSQVSFTKKLIDANTAIVVAVLETVAPVAGYATPKKVVKAANAA
Ga0268386_107754862	3300030619	Soil	MSTILSTVESYEDQVLDLVEKAKSPVVEYVAKGVELVGDRLPPVTYPASLPTPIEVVESQVTFAKKLIDANTAIVTAVLETIAPVAGYAKPKKAKAAVKAA
Ga0268386_109603582	3300030619	Soil	MSTILDTVETYEAQLLDLVSKAQAPVVEYVAKGVDLDGDRLPDVTYPTALPTPIEVVESQVAFAKKLIDANTAFVTAVLETVAPIAGFAKPKKVVKAATKAA
Ga0102746_103283442	3300031054	Soil	STILDTVVSYEDQIIDLVKQAKKPVVEYVGKGVSFVDGRLPEFTYPTALPTPLEVVESQAAFAKKLIDANTALVTAVLKAVAPVIGTEAPKVVKAAA
Ga0299914_101023801	3300031228	Soil	MTKILDTVVSYEDQLVDIVKQAKAPVTEYVAKGVDLLQDRLPEVSYPTGVPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVAGFAKPKKAAKPAVKAA
Ga0299913_106205242	3300031229	Soil	MSTILDTVETYEAQLLDLVSKAQAPVVEYVAKGVDLVGDRLPDVTYPTALPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVVGYAKPKKVTKPAVKAA
Ga0314816_10590071	3300031481	Soil	MTTILDTVVSYEDQLIDFVKRAQAPVVDYVAKGVELVGDRLPDVTYPASLPTPIEVVESQVAFAKKLIDANTALVTSVLETVAPVAGYAKPAKKVTKAAKAA
Ga0247727_10000215121	3300031576	Biofilm	MSTILTTVESYEDKVLDFVTKAQTPVVEYVAKGVELAGDRLPNVTYPTSLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVVGYAKPKKVVKAPKAA
Ga0307412_103581792	3300031911	Rhizosphere	MSTILDTVVGYEDQVIDYVKQAKKPVVEYVAKGVELVEGRLPSFTYPTALPTPVEVVESQTAFAKKLIDANAALVTAVLKTVAPVMGIEKAKPVKAATVAA
Ga0326597_101232023	3300031965	Soil	MATILDTVVSYEDQLVDLVKKAQAPVVDYVSKGVELVGSRLPQVTYPKGLATPIEVVESQVAFAKKLIDANTAIVTSVLTTVAPIAGYKAPAKKAAAKTVKAA
Ga0307409_1029556021	3300031995	Rhizosphere	MSNTILDTVVSYEDQLVDLVKKAQAPVVDYVAKGVELVGDRIPDVTYPGSLPTPIEVVETQVAFAKKLIDANSALVTSVLETVAPIAGFAKPAKKVAKAAKAA
Ga0307416_1011306302	3300032002	Rhizosphere	MSTILDTVVGYEDQVIDYVKQAKKPVVEYVAKGVELVEGRLPSFTYPTALPTPVEVVESQTAFAKKLIDANAALVTAVLKTVAPVMGIEKAKPVKAAEAAA
Ga0307411_112505831	3300032005	Rhizosphere	MTTFLTTVEGYEDQILDLVKKAKSPVVEYVAKGVDLVDGRLPEVTYPAGLPTPIEVVKSQAAFAKKLIDANTALVTAVLETVAPVAGYAVPRKVKAAPKAA
Ga0310906_109590461	3300032013	Soil	MSTILTTVEGYEDKVLELVKNAKAPVVEYVGKGVELVGDRSLSYPESLPTPIEVVKSQTVFVKKLIDANTAIVTAVLETIAPVVGFKTTKAAKPAVKAA
Ga0307415_1008355332	3300032126	Rhizosphere	MSTILDTVVGYEDQVIDYVKQAKKPVVEYVAKGVELVGDRLPEVTYPTSLPTPIEVVESQVAFAKKLIDANTAIVTAVLETVAPVAGFAKPKKVVKAAKAA
Ga0315270_102432902	3300032275	Sediment	MSTILDTVVGYEDKIIEFVKSAKTPVVSYVVKGLALVEDRLPEVTYPTALPTPIEIVETQAAFVKKFIDANSAIVTGVLVTLAPVAGYSVKKVVRAPRATKAA
Ga0214472_105732611	3300033407	Soil	EDQILELVKKAQAPVVEYVAKGVELVNGRLPDITYPSSLANPIDVVESQVAFAKKLIDANTALVTSVLETVAPLGGFAKPKKVAKAAKAA
Ga0214471_100888633	3300033417	Soil	MTKILDTVVSYEDQILELVKKAQAPVVEYVAKGVELVNGRLPDITYPSSLANPIDVVESQVAFAKKLIDANTALVTSVLETVAPLGGFAKPKKVAKAAKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072103

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences