Metagenome Family F071379

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071379
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	109 residues
Representative Sequence	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Number of Associated Samples	65
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.38 %
% of genes near scaffold ends (potentially truncated)	29.51 %
% of genes from short scaffolds (< 2000 bps)	76.23 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (90.164 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (32.787 % of family members)
Environment Ontology (ENVO)	Unclassified (37.705 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.984 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.10% β-sheet: 0.00% Coil/Unstructured: 52.90%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF12146	Hydrolase_4	6.56
PF03266	NTPase_1	5.74
PF09107	SelB-wing_3	2.46
PF08240	ADH_N	2.46
PF00689	Cation_ATPase_C	1.64
PF00326	Peptidase_S9	1.64
PF00216	Bac_DNA_binding	1.64
PF09722	Xre_MbcA_ParS_C	1.64
PF16576	HlyD_D23	1.64
PF12695	Abhydrolase_5	1.64
PF14403	CP_ATPgrasp_2	1.64
PF01734	Patatin	1.64
PF10576	EndIII_4Fe-2S	0.82
PF12697	Abhydrolase_6	0.82
PF00690	Cation_ATPase_N	0.82
PF02310	B12-binding	0.82
PF07589	PEP-CTERM	0.82
PF05728	UPF0227	0.82
PF13671	AAA_33	0.82
PF00563	EAL	0.82
PF11799	IMS_C	0.82
PF09335	SNARE_assoc	0.82
PF04168	Alpha-E	0.82
PF00011	HSP20	0.82
PF04324	Fer2_BFD	0.82
PF04879	Molybdop_Fe4S4	0.82
PF00149	Metallophos	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1618	Nucleoside-triphosphatase THEP1	Nucleotide transport and metabolism [F]	5.74
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	2.46
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.64
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.64
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.64
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.64
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.82
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.82
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.82
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.82
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.82
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.82
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.16 %
Unclassified	root	N/A	9.02 %
unclassified Thiobacillus	no rank	unclassified Thiobacillus	0.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.16 %
Unclassified	root	N/A	9.02 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.16 %
Unclassified	root	N/A	9.02 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.07 %
Unclassified	root	N/A	9.02 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	55.74 %
Unclassified	root	N/A	9.02 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.38 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	50.00 %
Unclassified	root	N/A	9.02 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	0.82 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Thiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae	47.54 %
Unclassified	root	N/A	9.02 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Acidithiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Thiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	47.54 %
Unclassified	root	N/A	9.02 %
Acidithiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus	0.82 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.02 %
Thiobacillus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3.28 %
unclassified Acidithiobacillus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus	0.82 %
Thiobacillus thioparus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	0.82 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.02 %
Thiobacillus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3.28 %
Acidithiobacillus sp. MC6.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp. MC6.1	0.82 %
Thiobacillus thioparus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	0.82 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000228\|TB_PC08_66DRAFT_10103318	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300000231\|TB_LI09_4DRAFT_10116643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	946	Open in IMG/M
3300000854\|WSSedB2T2DRAFT_1031352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	539	Open in IMG/M
3300001213\|JGIcombinedJ13530_108321502	Not Available	570	Open in IMG/M
3300003432\|JGI20214J51088_10001108	All Organisms → cellular organisms → Bacteria → Proteobacteria	18311	Open in IMG/M
3300003858\|Ga0031656_10017232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3024	Open in IMG/M
3300004072\|Ga0055512_10004629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1538	Open in IMG/M
3300004072\|Ga0055512_10030055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	869	Open in IMG/M
3300004241\|Ga0066604_10278009	Not Available	669	Open in IMG/M
3300004481\|Ga0069718_10147126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	687	Open in IMG/M
3300004481\|Ga0069718_15748509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7128	Open in IMG/M
3300004481\|Ga0069718_16065700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1441	Open in IMG/M
3300005045\|Ga0071328_101020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3508	Open in IMG/M
3300005217\|Ga0069005_10058014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	865	Open in IMG/M
3300005217\|Ga0069005_10134873	Not Available	647	Open in IMG/M
3300005219\|Ga0069004_10134583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	688	Open in IMG/M
3300006224\|Ga0079037_100009195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6306	Open in IMG/M
3300006224\|Ga0079037_100250865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1618	Open in IMG/M
3300006224\|Ga0079037_100571892	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300006224\|Ga0079037_101479934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	677	Open in IMG/M
3300009053\|Ga0105095_10039565	All Organisms → cellular organisms → Bacteria → Proteobacteria	2538	Open in IMG/M
3300009053\|Ga0105095_10112291	All Organisms → cellular organisms → Bacteria → Proteobacteria	1480	Open in IMG/M
3300009053\|Ga0105095_10306395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	873	Open in IMG/M
3300009053\|Ga0105095_10396397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	762	Open in IMG/M
3300009078\|Ga0105106_11074320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	571	Open in IMG/M
3300009082\|Ga0105099_10876951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	565	Open in IMG/M
3300009082\|Ga0105099_10910501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	556	Open in IMG/M
3300009087\|Ga0105107_10057451	All Organisms → cellular organisms → Bacteria → Proteobacteria	2747	Open in IMG/M
3300009087\|Ga0105107_10175033	All Organisms → cellular organisms → Bacteria → Proteobacteria	1507	Open in IMG/M
3300009087\|Ga0105107_10312651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1094	Open in IMG/M
3300009087\|Ga0105107_10933390	Not Available	604	Open in IMG/M
3300009087\|Ga0105107_11062700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	564	Open in IMG/M
3300009091\|Ga0102851_10048288	All Organisms → cellular organisms → Bacteria	3401	Open in IMG/M
3300009091\|Ga0102851_10488138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1263	Open in IMG/M
3300009091\|Ga0102851_10665710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1097	Open in IMG/M
3300009091\|Ga0102851_10744801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1042	Open in IMG/M
3300009091\|Ga0102851_13271170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	520	Open in IMG/M
3300009111\|Ga0115026_10098026	All Organisms → cellular organisms → Bacteria → Proteobacteria	1780	Open in IMG/M
3300009120\|Ga0117941_1008661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	5494	Open in IMG/M
3300009131\|Ga0115027_10015709	All Organisms → cellular organisms → Bacteria → Proteobacteria	3120	Open in IMG/M
3300009131\|Ga0115027_10266965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1132	Open in IMG/M
3300009131\|Ga0115027_10366245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	995	Open in IMG/M
3300009153\|Ga0105094_10012980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4450	Open in IMG/M
3300009153\|Ga0105094_10028451	All Organisms → cellular organisms → Bacteria → Proteobacteria	3053	Open in IMG/M
3300009153\|Ga0105094_10188883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1178	Open in IMG/M
3300009166\|Ga0105100_10009204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5725	Open in IMG/M
3300009166\|Ga0105100_10750427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	603	Open in IMG/M
3300009167\|Ga0113563_10206271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1958	Open in IMG/M
3300009167\|Ga0113563_10342637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1570	Open in IMG/M
3300009167\|Ga0113563_11957793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	700	Open in IMG/M
3300009167\|Ga0113563_11994805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	693	Open in IMG/M
3300009171\|Ga0105101_10014485	All Organisms → cellular organisms → Bacteria → Proteobacteria	3777	Open in IMG/M
3300009171\|Ga0105101_10352445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	714	Open in IMG/M
3300009179\|Ga0115028_10054143	All Organisms → cellular organisms → Bacteria → Proteobacteria	2045	Open in IMG/M
3300009179\|Ga0115028_10109987	All Organisms → cellular organisms → Bacteria → Proteobacteria	1584	Open in IMG/M
3300014322\|Ga0075355_1188555	Not Available	568	Open in IMG/M
3300014323\|Ga0075356_1040911	Not Available	977	Open in IMG/M
3300014885\|Ga0180063_1253180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	563	Open in IMG/M
3300018055\|Ga0184616_10168772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	814	Open in IMG/M
3300025000\|Ga0209318_1011757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2358	Open in IMG/M
3300025117\|Ga0208958_1082307	unclassified Thiobacillus → Thiobacillus sp.	1004	Open in IMG/M
3300025963\|Ga0210146_1000218	All Organisms → cellular organisms → Bacteria → Proteobacteria	5214	Open in IMG/M
3300025975\|Ga0210091_1000083	All Organisms → cellular organisms → Bacteria → Proteobacteria	7532	Open in IMG/M
3300027713\|Ga0209286_1018326	Not Available	2553	Open in IMG/M
3300027723\|Ga0209703_1015121	All Organisms → cellular organisms → Bacteria → Proteobacteria	2852	Open in IMG/M
3300027723\|Ga0209703_1117320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1014	Open in IMG/M
3300027731\|Ga0209592_1067417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1327	Open in IMG/M
3300027739\|Ga0209575_10049754	All Organisms → cellular organisms → Bacteria → Proteobacteria	1526	Open in IMG/M
3300027811\|Ga0256868_10401487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	552	Open in IMG/M
3300027818\|Ga0209706_10040371	All Organisms → cellular organisms → Bacteria	2359	Open in IMG/M
3300027818\|Ga0209706_10277712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	798	Open in IMG/M
3300027841\|Ga0209262_10018467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	2935	Open in IMG/M
3300027871\|Ga0209397_10144470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1051	Open in IMG/M
3300027877\|Ga0209293_10186453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1010	Open in IMG/M
3300027887\|Ga0208980_10005901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	7344	Open in IMG/M
3300032018\|Ga0315272_10027047	All Organisms → cellular organisms → Bacteria → Proteobacteria	2593	Open in IMG/M
3300032256\|Ga0315271_11052211	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300032275\|Ga0315270_10253696	Not Available	1092	Open in IMG/M
3300033406\|Ga0316604_10122355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1378	Open in IMG/M
3300033406\|Ga0316604_10708444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	553	Open in IMG/M
3300033408\|Ga0316605_10288674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1433	Open in IMG/M
3300033408\|Ga0316605_10339677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300033408\|Ga0316605_10355705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1306	Open in IMG/M
3300033413\|Ga0316603_10007832	All Organisms → cellular organisms → Bacteria	6361	Open in IMG/M
3300033413\|Ga0316603_10297501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1424	Open in IMG/M
3300033414\|Ga0316619_11061266	Not Available	709	Open in IMG/M
3300033414\|Ga0316619_11108483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	695	Open in IMG/M
3300033414\|Ga0316619_11780099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	558	Open in IMG/M
3300033414\|Ga0316619_11937502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	536	Open in IMG/M
3300033416\|Ga0316622_101429468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	808	Open in IMG/M
3300033416\|Ga0316622_101998209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	673	Open in IMG/M
3300033416\|Ga0316622_102359167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	615	Open in IMG/M
3300033419\|Ga0316601_101139927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	781	Open in IMG/M
3300033419\|Ga0316601_101556614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	666	Open in IMG/M
3300033419\|Ga0316601_101898195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	600	Open in IMG/M
3300033433\|Ga0326726_10000256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	51978	Open in IMG/M
3300033433\|Ga0326726_10019792	All Organisms → cellular organisms → Bacteria → Proteobacteria	5849	Open in IMG/M
3300033434\|Ga0316613_10295426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1070	Open in IMG/M
3300033482\|Ga0316627_101497728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	682	Open in IMG/M
3300033482\|Ga0316627_102974202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	504	Open in IMG/M
3300033483\|Ga0316629_10337106	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300033483\|Ga0316629_10589746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	824	Open in IMG/M
3300033483\|Ga0316629_11038380	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300033485\|Ga0316626_10192065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1598	Open in IMG/M
3300033485\|Ga0316626_10437594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1100	Open in IMG/M
3300033485\|Ga0316626_10742583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	857	Open in IMG/M
3300033485\|Ga0316626_11309252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	649	Open in IMG/M
3300033487\|Ga0316630_10363770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1141	Open in IMG/M
3300033487\|Ga0316630_10443514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1048	Open in IMG/M
3300033487\|Ga0316630_10529027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	971	Open in IMG/M
3300033488\|Ga0316621_10314397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1035	Open in IMG/M
3300033513\|Ga0316628_104368000	Not Available	502	Open in IMG/M
3300033521\|Ga0316616_100246368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1836	Open in IMG/M
3300033521\|Ga0316616_100354026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1596	Open in IMG/M
3300033521\|Ga0316616_101416259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp. MC6.1	896	Open in IMG/M
3300033521\|Ga0316616_101761013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	813	Open in IMG/M
3300033521\|Ga0316616_104277178	Not Available	537	Open in IMG/M
3300033557\|Ga0316617_100385198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300033557\|Ga0316617_100765846	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300033557\|Ga0316617_101744686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	634	Open in IMG/M
3300034090\|Ga0326723_0000060	All Organisms → cellular organisms → Bacteria → Proteobacteria	35893	Open in IMG/M
3300034169\|Ga0370480_0010806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3213	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.20%
Terrestrial	Environmental → Terrestrial	41.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.36%
Soil	Environmental → Terrestrial → Soil	39.34%
Marine	Environmental → Aquatic → Marine	7.38%
Sediment	Environmental → Aquatic → Sediment	2.46%
Peat	Environmental → Terrestrial → Peat	2.46%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	36.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	29.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.66%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.38%
Lake	Environmental → Aquatic → Freshwater → Lake	2.46%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.46%
Pond	Environmental → Aquatic → Freshwater → Pond	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.82%
Loam	Environmental → Terrestrial → Soil → Loam	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	36.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	29.51%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.66%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.10%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.28%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.46%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.46%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	1.64%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	32.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	20.49%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.66%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	6.56%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.10%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.28%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.46%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.46%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.46%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	1.64%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000228	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- PC08_66	Environmental	Open in IMG/M
3300000231	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4	Environmental	Open in IMG/M
3300000854	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B2 Tule	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300004241	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005217	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300025000	Soil microbial communities from Rifle, Colorado, USA - Groundwater E1	Environmental	Open in IMG/M
3300025117	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection B1 (SPAdes)	Environmental	Open in IMG/M
3300025963	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025975	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_PC08_66DRAFT_101033182	3300000228	Groundwater	MPQQRFHVVPVLKILFLTCPATALAFVLAACGSHTPPKPDAPSLEQRVDALERRLENLEARPEVKPPFRNKAEIQSHIEALEVERAQLQTRYLAPHPEIRTIDRELDILYTQLRMLE*
TB_LI09_4DRAFT_101166432	3300000231	Groundwater	MSHTRPILPLSCLTVALAFALTACGTQAPPKADTPSLEQQRLLDLERGTERLEARPAVQLPYRNKEEIQAHIKALEDERAKLLTGYLAQHPAIKDIDRRLEILYIQLRMLE*
WSSedB2T2DRAFT_10313522	3300000854	Wetland	LFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
JGIcombinedJ13530_1083215022	3300001213	Wetland	MSPTRLIFLRSCLAAVPAFALVACGSPAPPKADTPSVEQRLLDLELRMQKLEARPVIAPPYRSKAEIQAQINALEAERDKLLTRYHAQHPEIRDIDRQLAILNSQLKMAE*
JGI20214J51088_100011086	3300003432	Wetland	MSPVRSILFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
Ga0031656_100172322	3300003858	Freshwater Lake Sediment	MSPLLPILSRTCLTAVLAFSLAACGSHAPPNPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKMLE*
Ga0055512_100046291	3300004072	Natural And Restored Wetlands	TVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
Ga0055512_100300551	3300004072	Natural And Restored Wetlands	MSPILPILSRSCLTVALAFALVACATHAPPKTDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAEIQANIKALEAERDKLLIRYLPQHPDIKDIDRRLEILNNQLKMQE*
Ga0066604_102780091	3300004241	Freshwater	MSPLLPILYRTCLTAVLAFALAACGSHAPPNPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKMLE*
Ga0069718_101471262	3300004481	Sediment	MSHTRPILWSCLSVALAFALAACGTQAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLRVDYNAQHPAIKDIDRRLEILNVQLRMME*
Ga0069718_157485096	3300004481	Sediment	MSHTLSIPSRSCLSAALAFALAACGTQAPPKADTPPLEQRLFDLERRMERLEARPAVQPPYRNKEDIQAHIKALEEERAKLLAGYLAQHPAIRDIDRRLEILNVQLRMLE*
Ga0069718_160657002	3300004481	Sediment	MSHTRPILPLSCLTVALAFALTACGTQAPPKADTPSLEQQRLLDLERRTERLEARPAVQLPYRNKEEIQAHINALEDERAKLLTGYLAQHPAIKDIDRRLEVLYIQLRMLE*
Ga0071328_1010202	3300005045	Permafrost	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0069005_100580142	3300005217	Natural And Restored Wetlands	VASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
Ga0069005_101348732	3300005217	Natural And Restored Wetlands	MSPARPILSRSCLTVALAFALVACATHAPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAAIQENIKALEEERDKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE*
Ga0069004_101345832	3300005219	Natural And Restored Wetlands	MSPTLPILSKSCQTVALAFALVACATHMPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAAIEENIKALEEERNKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE*
Ga0079037_1000091958	3300006224	Freshwater Wetlands	MSPTRPILSRSCSTVVLAISLVGCGSSALPKPDAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQMLE*
Ga0079037_1002508652	3300006224	Freshwater Wetlands	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0079037_1005718922	3300006224	Freshwater Wetlands	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE*
Ga0079037_1014799342	3300006224	Freshwater Wetlands	MSHTRPILSRSCLTVALTLALAACGTPPKADTPSLEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105095_100395651	3300009053	Freshwater Sediment	MSSKPEVAVSAPTHKNAASFVAARKFAMSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105095_101122912	3300009053	Freshwater Sediment	MQLRFVAARRFAMSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMPE*
Ga0105095_103063951	3300009053	Freshwater Sediment	VLALALAACATSAPPKADTPSVEQRLVDLERRMERLEARPAVQPAYRTREEILSHINALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105095_103963972	3300009053	Freshwater Sediment	MVALAFALAACGANAPPKADTLPLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0105106_110743201	3300009078	Freshwater Sediment	MQLRFVAARRFAMSPTRPILSLPCLTVALAFALAACGTQAPAPPKADTPPQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERTKLLIDYHAQHPAIKDIDRRLEILNVQLRMLE*
Ga0105099_108769511	3300009082	Freshwater Sediment	RSRMQLRFVAARRFAMSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMPE*
Ga0105099_109105012	3300009082	Freshwater Sediment	LTVALAFALAACGTQAPPKADTPSQEQRLLDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105107_100574514	3300009087	Freshwater Sediment	MSHTLSILCRSCLPAALALALAACATPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEVQAHIKDLETERSRLRVDYHAEHPAIKDIDRRLEILNVQLKMME*
Ga0105107_101750332	3300009087	Freshwater Sediment	VLALALAACATSAPPKADTPSVEQRLVDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105107_103126513	3300009087	Freshwater Sediment	MSPTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDR
Ga0105107_109333901	3300009087	Freshwater Sediment	MSHPLPIFSLSCLTVALTFALAACGTQAPPKADTPSVEQRLFDLERRMERLEARLAVEPPYRSKVEIQAHIRELEAERAELLTRYLPQHPAIKDIDRMLWILDKQLKELE*
Ga0105107_110627001	3300009087	Freshwater Sediment	QLWFAAARRFAMSLARPILSQSCLAVALALALAACGTQLPKADTPSQEQRLFDLERRMERLEARPAVQPPYRDKAEIEAHIKALEEERTTLLADYHAQHPAIRDIDRRLEILNVQLRMLE
Ga0102851_100482883	3300009091	Freshwater Wetlands	MQLRFVAAWRAAMSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQMLE*
Ga0102851_104881381	3300009091	Freshwater Wetlands	EALARATISDRKPGGLAARRIAMSHTRPILSLPCLTVALALTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE*
Ga0102851_106657102	3300009091	Freshwater Wetlands	MLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0102851_107448012	3300009091	Freshwater Wetlands	MQQRRPTLSLSCLTVALAFALAACGTQMPPKADAPSLEQRLFDLERRTERLEARPAVQPPHRSREEIQAHIKALEAERSKLLIDYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0102851_132711701	3300009091	Freshwater Wetlands	MLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERSKLLTHYYPQHPEIKDIDRSLEILNSQLQMLEQP*
Ga0115026_100980262	3300009111	Wetland	MSPTRPILPLSGLTVALALALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE*
Ga0117941_10086615	3300009120	Lake Sediment	MQIRFVAARWIAMSHTRLILSRSCLTVALAFALAACGANAPPKADTPLLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0115027_100157094	3300009131	Wetland	MQLRFVAAWRAAMSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPAIRDIDRQLAILNSQLQMRE*
Ga0115027_102669652	3300009131	Wetland	SHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEGERTQLLTDYHAQHPAIKDIDRRLEILNVQLRMLE*
Ga0115027_103662451	3300009131	Wetland	LRFVAAWRAAMSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0105094_100129808	3300009153	Freshwater Sediment	LALAACGTPAPPKADTPSVEQRLVDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105094_100284511	3300009153	Freshwater Sediment	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMPE*
Ga0105094_101888832	3300009153	Freshwater Sediment	MQIQSVAARWIAMSHTRLIPSRSCLTVALAFALAACGANAAQKADTPPLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0105100_100092045	3300009166	Freshwater Sediment	MSSKPEVAVSAPTHKNAASFVAARKFAMSHTRPILPLSGPTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105100_107504272	3300009166	Freshwater Sediment	MQLRFVAARRFAMSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQ
Ga0113563_102062712	3300009167	Freshwater Wetlands	VLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQMLE*
Ga0113563_103426372	3300009167	Freshwater Wetlands	MLGLTFALAACGSPAPPKAGTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0113563_119577932	3300009167	Freshwater Wetlands	SVAARRFAMSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0113563_119948052	3300009167	Freshwater Wetlands	QFVRQPTTMQIQFVAARKFAMRHTRPILSRSFMMVALAFALAACASNVPPKADTPSLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQANIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0105101_100144852	3300009171	Freshwater Sediment	MSPTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105101_103524452	3300009171	Freshwater Sediment	MSHTRLIPSRSCLTVALAFALAACGANAPPKADTLPLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0115028_100541434	3300009179	Wetland	VLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTHYLPQHPEIRDIDRQLAILNSQLQRLE*
Ga0115028_101099873	3300009179	Wetland	MLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0075355_11885551	3300014322	Natural And Restored Wetlands	MQIRFVATRRVAMSPTLPILSRSCQTVALALALVACATHVPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKVEIQENIKALEEERDKLLIRYLPQHPDIKDIDRRLEILNSQLKMLQ*
Ga0075356_10409112	3300014323	Natural And Restored Wetlands	MQIRFVAARRVAMSPARPILSRSCQTVALAFALVACATHMPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAEIQAHIKALEAERDKLLTRYLPQHPDIKDIDRRLEILNNQLKMQE
Ga0180063_12531801	3300014885	Soil	MSSKPGVAVSAPTHKNAASFVAARKFAMSPTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0184616_101687721	3300018055	Groundwater Sediment	MSHTRPLLSRSCLAVALAFALAACGTQAPPKADAPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSKLLIDYLAQHPAIKDIDRRLEILNVQLRMLE
Ga0209318_10117572	3300025000	Soil	MPDTFPMFPWSCMALVLALAGCGSNAPLKAGTPSIEQRLLELERRMDTMEARFAVAPPYRNKAEIQAHIQELEAERAELLIRYLPQHPAIQDIDRMLWILDKQLKELE
Ga0208958_10823072	3300025117	Soil	MPDTFPMPPRSCMALALAFALAGCGSNALPKPETPSIEKRLLDLERRMDRMEARFAVAPPYRNKAEIQAHIQELEAERAELLTRYLPQHPAIQDIDRMLWILGKQLQELE
Ga0210146_10002182	3300025963	Natural And Restored Wetlands	MSPVRSILFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP
Ga0210091_10000832	3300025975	Natural And Restored Wetlands	MSPVRSILFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVEGLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP
Ga0209286_10183264	3300027713	Freshwater Sediment	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERTKLLIDYHAQHPAIKD
Ga0209703_10151211	3300027723	Freshwater Sediment	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMM
Ga0209703_11173202	3300027723	Freshwater Sediment	MSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMPE
Ga0209592_10674172	3300027731	Freshwater Sediment	MSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0209575_100497543	3300027739	Freshwater	MSPLLPILYRTCLTAVLAFALAACGSHAPPKPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKVLE
Ga0256868_104014871	3300027811	Soil	MPRTLPILPRSCLMVAFAFALAACGSQAPPKTDKPSLEQRLFELERRMERLEARPAVEPPYRSKAEIRAHIEALEEERGELLTRYYAQHPAIKDIDRRLEILNIQLRMPDSHGGEASR
Ga0209706_100403711	3300027818	Freshwater Sediment	MSHTLSILCRSCLPAALALALAACATPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKDLETERSRLRVDYHAEHPAIKDIDRRLEILNVQLKMME
Ga0209706_102777122	3300027818	Freshwater Sediment	PEVAVSAPTHKNAASFVAARKFAMSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQSPYRTKEEIQAHIKALEDERASLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0209262_100184675	3300027841	Freshwater	MSPLLPILYRTCLTAVLAFSLAACGSHAPPNPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKMLE
Ga0209397_101444702	3300027871	Wetland	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0209293_101864532	3300027877	Wetland	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0208980_100059014	3300027887	Wetland	MSPIFLISSRSCLMLALTFSLAACGSPAPPQTTTPSVEQRLSGLERRMDRLEARPVVQPPYRSKAEIQANIEALEAERVKLLPRYSAQHPDIKDIDRKLAILNSQLKMLESP
Ga0315272_100270472	3300032018	Sediment	MFSIFLIPSRACLMLALTFALVACGSPAPPKADMPSVEQRLSEIERRMERLDARPVVQPPYRSKAEIQANIEALEAERGKLLIRYSAQHPDIKDIDRKVEILNCQLKLLESP
Ga0315271_110522111	3300032256	Sediment	SLLPQKVSMSPIFLSPSRSCLMLALTFALAACGSPAPPKADTPSVEQRLSGLEHRMDMQEARPVVQPPYRSKAEIQANIEALEAERRELLVRYSAQHPDIRDIDRKVGILNCQMKLLESP
Ga0315270_102536961	3300032275	Sediment	MMLAFTLALAACGSPAPPKADTPSVERCLSDLDRRMDILEARPVVQPPYRSKAEIQANIEALEAERGKLLTRYYAQHPDIKDIDRKVEILNCQLKLLESP
Ga0316604_101223551	3300033406	Soil	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQSPYRTKEDIQAHIKALEEERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316604_107084442	3300033406	Soil	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0316605_102886741	3300033408	Soil	ALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRVME
Ga0316605_103396773	3300033408	Soil	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE
Ga0316605_103557052	3300033408	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0316603_100078327	3300033413	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKPDAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0316603_102975012	3300033413	Soil	MSHTRPILCRSCLTVALALALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME
Ga0316619_110612662	3300033414	Soil	MQIRSVTDTKDAMPHTPPILSRAWLTVALSFSLAACGSQAPPKTDTPSLEQRMSELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316619_111084832	3300033414	Soil	MSPTCPILSRSCSTFLLAIALAGCGSSAPPKADAPSVEQRLSDLERRVEKLEARPAVAPPLRSKAEIESQIKALEAERAKLLARYLPQHPEIRDIDRQLAILNSQLQMRE
Ga0316619_117800991	3300033414	Soil	MSPTRPILPLSGLTVALALALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQVHIKALEDERSKLLIDYHAQHPAIKDIDRRLEILNV
Ga0316619_119375021	3300033414	Soil	MSPTRPIPSVSCLTVALAFALAGCGTQAPLKAEPPSLEQRLFDLERRMERLEARPAVQPPYRTREEIQAQIKALEDERTQLLIDYRAQHPAIKDIDRRLEILNAQ
Ga0316622_1014294681	3300033416	Soil	MSRIFPIPARSCLMLALSFALVACGSQAPPKADSPSVEQRLSDLERRLEMLEARPVVQPPYRSRAEIQTNIEALEAERVRLLARYYPQHPEIKDIDRMLGILNDQLKLLKSP
Ga0316622_1019982091	3300033416	Soil	ILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPAIRDIDRQLAILNSQLQMRE
Ga0316622_1023591672	3300033416	Soil	LAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQSPYRTKEEIQAHIKALEEERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316601_1011399271	3300033419	Soil	MSHTRPILSLPCLTVALALTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE
Ga0316601_1015566141	3300033419	Soil	MRHTRPILSRSFMTVALAFALAACASNAPPKADTPSLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQANIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE
Ga0316601_1018981952	3300033419	Soil	ACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0326726_1000025617	3300033433	Peat Soil	MSPTLPILSKSCQTVALAFALVACATHAPPETDTPSVEQRLSDLERRVEKLEARPMVEPPYRNKAAIQENIKALEEERDKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE
Ga0326726_100197923	3300033433	Peat Soil	MSPALPILARSCQAIALAFALVACATHAPPKTDTPSVEQRLSDLERRVEKLEARSVVEPPYRNKAEIQAHIKALEAERDKLLTRYLPQHPDIKDIDRRLEILNSQLKMLE
Ga0316613_102954262	3300033434	Soil	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKAGTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0316627_1014977282	3300033482	Soil	ACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316627_1029742021	3300033482	Soil	MSHTRPILSRSCLTLALALALAACGTPPKADTPSLEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEAERTKLLTDYHAQHPAIKDIDRRLEILNVQLRMLE
Ga0316629_103371061	3300033483	Soil	MSRIFPIPARSCLMLALSFALVACGSQAPPKADSPSVEQRLSDLERRLDMLEARPVVQPPYRSRAEIQTNIEALEAERVRLLARYYPQHPEIKDIDRMLGILNDQLKLLKSP
Ga0316629_105897462	3300033483	Soil	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKAGTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRR
Ga0316629_110383801	3300033483	Soil	LAACGSQAPPKTGTPSLEQRMFELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316626_101920652	3300033485	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYFPQHPEIRDIDRQLAILNSQLKMLE
Ga0316626_104375942	3300033485	Soil	MQQRRPTLSLSCLTVALAFALAACGTQMPPKADAPSLEQRLFDLERRTERLEARPAVQPPHRSREEIQAHIKALEAERSKLLIDYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316626_107425831	3300033485	Soil	CLTVALALTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE
Ga0316626_113092521	3300033485	Soil	ALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME
Ga0316630_103637701	3300033487	Soil	CLTVALALALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME
Ga0316630_104435142	3300033487	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYRPQHPEIRDIDRQLAILNSQLQMLE
Ga0316630_105290271	3300033487	Soil	MSHTLPILSLPCLTVALAFALAACGTQAPAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERSKLLIDYHAQHPAIKDIDRRLEILNVQLRMLE
Ga0316621_103143973	3300033488	Soil	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRL
Ga0316628_1043680001	3300033513	Soil	MQIRSVTDTKDAMPHTPPILSRAWLTVALSFSLAACGSQAPPKTDTPSLEQRMFELERRVESLEARPAVKPPYRNKAEIQANIRALEDERAELLTHYLPQHPYIKDIDRELEIL
Ga0316616_1002463682	3300033521	Soil	MSRIFPIPARSCLMLALSFAVAACGSPAPPRPDTPSLEQRLSELERRVEMLEARPLVQPPYRSRAEIQTNIEALEAERVKLLSRYYPQHPEIKDIDRMLQILNDQLKLLGSP
Ga0316616_1003540263	3300033521	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPAIRDIDRQLAILNSQLQMRE
Ga0316616_1014162591	3300033521	Soil	MSRIFPIPARSCLMLALSFALLACGSQAPPKADSPSVEQRLSDLERRLEMLEARPVVQPPYRSRAEIQTNIEALEAERVRLLARYYPQHPEIRNIDRMLEILNDQLKLLKSP
Ga0316616_1017610132	3300033521	Soil	MSPTCPLLSRSCSTFVLAIALAGCGSSAPPKADAPSVEQRLSDLERRVEKLEARPAVAPPLRSKAEIESQIKALEAERAKLLARYLPQHPEIRDIDRQLAILNSQLKMLE
Ga0316616_1042771781	3300033521	Soil	ILSRAWLTVALSFSLAACGSQAPPKTGTPSLEQRMFELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316617_1003851982	3300033557	Soil	MSHTRPILSRSYLTLVLALALVACETPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE
Ga0316617_1007658461	3300033557	Soil	MPHTPPILSRAWLTVALSFSLAACGSQAPPKTDTPSLEQRMSELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316617_1017446862	3300033557	Soil	SCSTFLLAIALAGCGSSAPPKADAPSVEQRLSDLERRVEKLEARPAVAPPLRSKAEIESQIKALEAERAKLLARYLPQHPEIRDIDRQLAILNSQLKMLE
Ga0326723_0000060_24216_24584	3300034090	Peat Soil	MQIRFVAARRVAMSPTLPILSKSCQTVALAFALVACATHAPPETDTPSVEQRLSDLERRVEKLEARPMVEPPYRNKAAIQENIKALEEERDKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE
Ga0370480_0010806_1538_1870	3300034169	Untreated Peat Soil	MSHTRPILSLPCLTVALASTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences