NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F069784

Metagenome Family F069784

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069784
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 71 residues
Representative Sequence MSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA
Number of Associated Samples 106
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 67.48 %
% of genes near scaffold ends (potentially truncated) 17.89 %
% of genes from short scaffolds (< 2000 bps) 55.28 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.187 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge
(14.634 % of family members)
Environment Ontology (ENVO) Unclassified
(34.959 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(47.154 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 70.00%    β-sheet: 0.00%    Coil/Unstructured: 30.00%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF13672PP2C_2 21.14
PF03992ABM 9.76
PF01709Transcrip_reg 4.07
PF136224HBT_3 4.07
PF13714PEP_mutase 3.25
PF01979Amidohydro_1 1.63
PF00534Glycos_transf_1 1.63
PF02254TrkA_N 1.63
PF00459Inositol_P 0.81
PF13202EF-hand_5 0.81
PF13442Cytochrome_CBB3 0.81
PF03900Porphobil_deamC 0.81
PF08241Methyltransf_11 0.81
PF02518HATPase_c 0.81
PF13522GATase_6 0.81
PF00563EAL 0.81
PF00115COX1 0.81
PF02557VanY 0.81
PF01322Cytochrom_C_2 0.81
PF00535Glycos_transf_2 0.81
PF05598DUF772 0.81
PF00583Acetyltransf_1 0.81
PF07484Collar 0.81
PF13277YmdB 0.81
PF00106adh_short 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0217Transcriptional and/or translational regulatory protein YebC/TACO1Translation, ribosomal structure and biogenesis [J] 4.07
COG0181Porphobilinogen deaminaseCoenzyme transport and metabolism [H] 0.81
COG1876LD-carboxypeptidase LdcB, LAS superfamilyCell wall/membrane/envelope biogenesis [M] 0.81
COG2173D-alanyl-D-alanine dipeptidaseCell wall/membrane/envelope biogenesis [M] 0.81
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 0.81
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 0.81
COG3909Cytochrome c556Energy production and conversion [C] 0.81
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 0.81
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000271|PBR_1016862All Organisms → cellular organisms → Bacteria → Proteobacteria4584Open in IMG/M
3300000883|EsDRAFT_10158263All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300001213|JGIcombinedJ13530_108348955All Organisms → cellular organisms → Bacteria → Proteobacteria530Open in IMG/M
3300001800|JGI24115J20150_1003765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4012Open in IMG/M
3300001800|JGI24115J20150_1007926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2256Open in IMG/M
3300002856|draft_11343372All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium712Open in IMG/M
3300003278|U2draft_1003737All Organisms → cellular organisms → Bacteria → Proteobacteria9749Open in IMG/M
3300004071|Ga0055486_10149505All Organisms → cellular organisms → Bacteria → Proteobacteria567Open in IMG/M
3300004096|Ga0066177_10577683All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300004123|Ga0066181_10140295All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300004128|Ga0066180_10004536All Organisms → cellular organisms → Bacteria → Proteobacteria3872Open in IMG/M
3300004155|Ga0066600_10248883All Organisms → cellular organisms → Bacteria → Proteobacteria789Open in IMG/M
3300004240|Ga0007787_10014623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3207Open in IMG/M
3300004282|Ga0066599_100679841All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300004481|Ga0069718_14443178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3429Open in IMG/M
3300005343|Ga0070687_100678962All Organisms → cellular organisms → Bacteria → Proteobacteria717Open in IMG/M
3300005525|Ga0068877_10040657All Organisms → cellular organisms → Bacteria → Proteobacteria3116Open in IMG/M
3300005533|Ga0070734_10166212All Organisms → cellular organisms → Bacteria → Proteobacteria1277Open in IMG/M
3300005656|Ga0073902_10318679All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300005758|Ga0078117_1047898All Organisms → cellular organisms → Bacteria → Proteobacteria3669Open in IMG/M
3300005982|Ga0075156_10023405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3662Open in IMG/M
3300005985|Ga0081539_10185702All Organisms → cellular organisms → Bacteria → Proteobacteria972Open in IMG/M
3300005986|Ga0075152_10069824All Organisms → cellular organisms → Bacteria → Proteobacteria2071Open in IMG/M
3300005988|Ga0075160_10128010All Organisms → cellular organisms → Bacteria → Proteobacteria1403Open in IMG/M
3300006033|Ga0075012_10014912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae6687Open in IMG/M
3300006033|Ga0075012_10229464All Organisms → cellular organisms → Bacteria → Proteobacteria1304Open in IMG/M
3300006033|Ga0075012_10840368All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria552Open in IMG/M
3300006039|Ga0073915_10061752All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300006056|Ga0075163_10079921All Organisms → cellular organisms → Bacteria → Proteobacteria3961Open in IMG/M
3300006056|Ga0075163_10788660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria999Open in IMG/M
3300006853|Ga0075420_100825458All Organisms → cellular organisms → Bacteria → Proteobacteria798Open in IMG/M
3300006865|Ga0073934_10155397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1622Open in IMG/M
3300006880|Ga0075429_100603016All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300007004|Ga0079218_13056523All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300007171|Ga0102977_1116205All Organisms → cellular organisms → Bacteria → Proteobacteria3655Open in IMG/M
3300007212|Ga0103958_1177273All Organisms → cellular organisms → Bacteria → Proteobacteria1911Open in IMG/M
3300007214|Ga0103959_1237029All Organisms → cellular organisms → Bacteria → Proteobacteria2427Open in IMG/M
3300009009|Ga0105105_10710950All Organisms → cellular organisms → Bacteria → Proteobacteria598Open in IMG/M
3300009032|Ga0105048_10002081All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria32313Open in IMG/M
3300009078|Ga0105106_10062192All Organisms → cellular organisms → Bacteria → Proteobacteria2751Open in IMG/M
3300009095|Ga0079224_100132534All Organisms → cellular organisms → Bacteria → Proteobacteria3609Open in IMG/M
3300009112|Ga0115923_10878928Not Available4191Open in IMG/M
3300009161|Ga0114966_10068989All Organisms → cellular organisms → Bacteria → Proteobacteria2447Open in IMG/M
3300009354|Ga0115925_10827481All Organisms → cellular organisms → Bacteria → Proteobacteria884Open in IMG/M
3300009687|Ga0116144_10263128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria897Open in IMG/M
3300009688|Ga0116176_10000748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria26196Open in IMG/M
3300009688|Ga0116176_10001781All Organisms → cellular organisms → Bacteria → Proteobacteria16602Open in IMG/M
3300009688|Ga0116176_10007698All Organisms → cellular organisms → Bacteria → Proteobacteria7418Open in IMG/M
3300009688|Ga0116176_10251270All Organisms → cellular organisms → Bacteria → Proteobacteria883Open in IMG/M
3300009779|Ga0116152_10054316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2498Open in IMG/M
3300009780|Ga0116156_10000195All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria66035Open in IMG/M
3300009780|Ga0116156_10179413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1147Open in IMG/M
3300009781|Ga0116178_10013972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5163Open in IMG/M
3300010401|Ga0134121_10803786All Organisms → cellular organisms → Bacteria → Proteobacteria904Open in IMG/M
3300010429|Ga0116241_10534172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria915Open in IMG/M
3300010429|Ga0116241_11319883All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300010885|Ga0133913_10030058All Organisms → cellular organisms → Bacteria → Proteobacteria14580Open in IMG/M
3300010885|Ga0133913_11884541All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1492Open in IMG/M
3300011918|Ga0120090_117087All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria655Open in IMG/M
3300012973|Ga0123351_1030758All Organisms → cellular organisms → Bacteria → Proteobacteria2723Open in IMG/M
3300013006|Ga0164294_10005200All Organisms → cellular organisms → Bacteria → Proteobacteria11186Open in IMG/M
(restricted) 3300013131|Ga0172373_10113998All Organisms → cellular organisms → Bacteria2004Open in IMG/M
(restricted) 3300013138|Ga0172371_10238471All Organisms → cellular organisms → Bacteria → Proteobacteria1493Open in IMG/M
3300014314|Ga0075316_1099315All Organisms → cellular organisms → Bacteria → Proteobacteria691Open in IMG/M
3300014323|Ga0075356_1001601All Organisms → cellular organisms → Bacteria3443Open in IMG/M
3300015360|Ga0163144_10002613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria41355Open in IMG/M
3300015360|Ga0163144_10155292All Organisms → cellular organisms → Bacteria → Proteobacteria3358Open in IMG/M
3300017788|Ga0169931_10000528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae62691Open in IMG/M
3300018422|Ga0190265_12394492All Organisms → cellular organisms → Bacteria → Proteobacteria628Open in IMG/M
3300018476|Ga0190274_10696164All Organisms → cellular organisms → Bacteria → Proteobacteria1060Open in IMG/M
3300019377|Ga0190264_10232850All Organisms → cellular organisms → Bacteria → Proteobacteria1050Open in IMG/M
3300020027|Ga0193752_1028551All Organisms → cellular organisms → Bacteria → Proteobacteria2574Open in IMG/M
3300020057|Ga0163151_10000741All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria56778Open in IMG/M
3300020147|Ga0196976_1138460All Organisms → cellular organisms → Bacteria → Proteobacteria523Open in IMG/M
3300020160|Ga0211733_10891102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1109Open in IMG/M
3300020172|Ga0211729_10811946All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium867Open in IMG/M
3300020195|Ga0163150_10460823All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria570Open in IMG/M
3300020219|Ga0163146_10198230All Organisms → cellular organisms → Bacteria → Proteobacteria1268Open in IMG/M
3300021090|Ga0210377_10001842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria18954Open in IMG/M
3300021339|Ga0193706_1052861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1138Open in IMG/M
3300022222|Ga0226658_10526929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria523Open in IMG/M
3300023100|Ga0247738_10071015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1152Open in IMG/M
3300024343|Ga0244777_10178503All Organisms → cellular organisms → Bacteria → Proteobacteria1367Open in IMG/M
3300024346|Ga0244775_10761398All Organisms → cellular organisms → Bacteria → Proteobacteria777Open in IMG/M
3300024502|Ga0255181_1016175All Organisms → cellular organisms → Bacteria → Proteobacteria1507Open in IMG/M
3300024515|Ga0255183_1081698All Organisms → cellular organisms → Bacteria → Proteobacteria656Open in IMG/M
3300025310|Ga0209172_10113008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1537Open in IMG/M
3300025526|Ga0208492_1001689All Organisms → cellular organisms → Bacteria → Proteobacteria12731Open in IMG/M
3300025526|Ga0208492_1012457All Organisms → cellular organisms → Bacteria → Proteobacteria2293Open in IMG/M
3300025772|Ga0208939_1002573All Organisms → cellular organisms → Bacteria → Proteobacteria12557Open in IMG/M
3300025772|Ga0208939_1003353All Organisms → cellular organisms → Bacteria → Proteobacteria10650Open in IMG/M
3300025772|Ga0208939_1005156All Organisms → cellular organisms → Bacteria → Proteobacteria8085Open in IMG/M
3300025772|Ga0208939_1157988All Organisms → cellular organisms → Bacteria → Proteobacteria808Open in IMG/M
3300025855|Ga0209717_1042709All Organisms → cellular organisms → Bacteria → Proteobacteria2271Open in IMG/M
3300025871|Ga0209311_1283934All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300025871|Ga0209311_1357275All Organisms → cellular organisms → Bacteria → Proteobacteria534Open in IMG/M
3300027503|Ga0255182_1054554All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300027794|Ga0209480_10366266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria600Open in IMG/M
3300027818|Ga0209706_10315218All Organisms → cellular organisms → Bacteria → Proteobacteria739Open in IMG/M
3300027841|Ga0209262_10076531All Organisms → cellular organisms → Bacteria → Proteobacteria1544Open in IMG/M
3300027851|Ga0209066_10044769All Organisms → cellular organisms → Bacteria3292Open in IMG/M
3300027878|Ga0209181_10006757All Organisms → cellular organisms → Bacteria15967Open in IMG/M
3300027892|Ga0209550_10003754All Organisms → cellular organisms → Bacteria → Proteobacteria14426Open in IMG/M
3300027979|Ga0209705_10080955All Organisms → cellular organisms → Bacteria → Proteobacteria1777Open in IMG/M
3300028073|Ga0255180_1089524All Organisms → cellular organisms → Bacteria → Proteobacteria551Open in IMG/M
3300028590|Ga0247823_10575611All Organisms → cellular organisms → Bacteria → Proteobacteria848Open in IMG/M
3300028592|Ga0247822_11912786All Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300031455|Ga0307505_10013096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4068Open in IMG/M
3300031740|Ga0307468_100005938All Organisms → cellular organisms → Bacteria4291Open in IMG/M
3300031787|Ga0315900_10018084All Organisms → cellular organisms → Bacteria → Proteobacteria8285Open in IMG/M
3300032050|Ga0315906_10375596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1248Open in IMG/M
3300032050|Ga0315906_10606215All Organisms → cellular organisms → Bacteria → Proteobacteria900Open in IMG/M
3300032092|Ga0315905_10049260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4276Open in IMG/M
3300032126|Ga0307415_101113343All Organisms → cellular organisms → Bacteria → Proteobacteria740Open in IMG/M
3300032144|Ga0315910_11235325All Organisms → cellular organisms → Bacteria → Proteobacteria583Open in IMG/M
3300032157|Ga0315912_10068118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2799Open in IMG/M
3300032420|Ga0335397_11006793All Organisms → cellular organisms → Bacteria → Proteobacteria555Open in IMG/M
3300033978|Ga0334977_0025178All Organisms → cellular organisms → Bacteria → Proteobacteria3384Open in IMG/M
3300033980|Ga0334981_0134985All Organisms → cellular organisms → Bacteria → Proteobacteria1194Open in IMG/M
3300033993|Ga0334994_0007851All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7446Open in IMG/M
3300034019|Ga0334998_0072828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2338Open in IMG/M
3300034106|Ga0335036_0003901All Organisms → cellular organisms → Bacteria → Proteobacteria12760Open in IMG/M
3300034160|Ga0370510_0213364All Organisms → cellular organisms → Bacteria → Proteobacteria602Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge14.63%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater7.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.50%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake4.88%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat4.88%
Wastewater EffluentEngineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent4.88%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.25%
WatershedsEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds3.25%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater3.25%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater3.25%
Serpentinite Rock And FluidEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Serpentinite Rock And Fluid3.25%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.44%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater2.44%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater2.44%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.63%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.63%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.63%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.63%
Swimming Pool Sandfilter BackwashEngineered → Built Environment → Unclassified → Unclassified → Unclassified → Swimming Pool Sandfilter Backwash1.63%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.81%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.81%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.81%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.81%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.81%
Freshwater And MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Freshwater And Marine0.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.81%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand0.81%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.81%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.81%
Mine Pit PondEnvironmental → Terrestrial → Geologic → Mine → Unclassified → Mine Pit Pond0.81%
FecalHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal0.81%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.81%
Down-Flow Hanging Sponge ReactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor0.81%
Hydrocarbon Resource EnvironmentsEngineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments0.81%
Photobioreactor IncubatedEngineered → Biotransformation → Microbial Enhanced Oil Recovery → Unclassified → Unclassified → Photobioreactor Incubated0.81%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000271Photobioreactor incubated microbial communities from Hamburg, Germany - Sample 1EngineeredOpen in IMG/M
3300000883Estuary microbial communities from the Columbia River - 5 PSUEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001800Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Mar_CSW14ABEnvironmentalOpen in IMG/M
3300002856Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Tailing Pond Surface TP_surfaceEngineeredOpen in IMG/M
3300003278Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - U2-648F-DHSEngineeredOpen in IMG/M
3300004071Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004096Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)EnvironmentalOpen in IMG/M
3300004123Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300004128Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (version 2)EnvironmentalOpen in IMG/M
3300004155Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300004282Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sedimentEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005656Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB19-KitEngineeredOpen in IMG/M
3300005758Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005982Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown DNAEngineeredOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300005986Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNAEngineeredOpen in IMG/M
3300005988Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNAEngineeredOpen in IMG/M
3300006033Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15EnvironmentalOpen in IMG/M
3300006039Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_30-Apr-14EnvironmentalOpen in IMG/M
3300006056Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNAEngineeredOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007171Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007212Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projectsEnvironmentalOpen in IMG/M
3300007214Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projectsEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009032Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009095Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015EnvironmentalOpen in IMG/M
3300009112Microbial communities from sand-filter backwash in Singapore swimming pools - KB-2EngineeredOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009354Microbial communities from sand-filter backwash in Singapore swimming pools - PR-2EngineeredOpen in IMG/M
3300009687Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaGEngineeredOpen in IMG/M
3300009688Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaGEngineeredOpen in IMG/M
3300009779Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC119_MetaGEngineeredOpen in IMG/M
3300009780Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaGEngineeredOpen in IMG/M
3300009781Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaGEngineeredOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010429AD_USRAcaEngineeredOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011918Mine pit pond microbial communities from Vermont, USA - 2SEnvironmentalOpen in IMG/M
3300012973Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung E36 Day 36 MetagenomeHost-AssociatedOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013138 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12mEnvironmentalOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300014323Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1EnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300020057Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2EnvironmentalOpen in IMG/M
3300020147Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13CEnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020195Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IBEnvironmentalOpen in IMG/M
3300020219Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP7.G1EnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300022222Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)EnvironmentalOpen in IMG/M
3300023100Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L013-104B-2EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024502Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8dEnvironmentalOpen in IMG/M
3300024515Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8dEnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025526Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Mar_CSW14AB (SPAdes)EnvironmentalOpen in IMG/M
3300025772Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025855Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC048_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025871Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG (SPAdes)EngineeredOpen in IMG/M
3300027503Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8dEnvironmentalOpen in IMG/M
3300027794Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNA (SPAdes)EngineeredOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027841Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027851Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15 (SPAdes)EnvironmentalOpen in IMG/M
3300027878Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028073Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8dEnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032420Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)EnvironmentalOpen in IMG/M
3300033978Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002EnvironmentalOpen in IMG/M
3300033980Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300034019Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034160Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03S_18EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
PBR_101686233300000271Photobioreactor IncubatedMTQSLKVTKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKTKTA*
EsDRAFT_1015826323300000883Freshwater And MarineMTKTANREPLTVRLDPDSKRLFSAEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKPRPL*
JGIcombinedJ13530_10834895513300001213WetlandMSKQVAKTANRQPLTVRLDPDSKKMFSEQAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSSALRSQRTH*
JGI24115J20150_100376543300001800Serpentinite Rock And FluidMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA*
JGI24115J20150_100792643300001800Serpentinite Rock And FluidMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA*
draft_1134337213300002856Hydrocarbon Resource EnvironmentsMTKSANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA*
U2draft_100373783300003278Down-Flow Hanging Sponge ReactorMSKTANRQPLTVRLDPESKRLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKARTA*
Ga0055486_1014950513300004071Natural And Restored WetlandsMSKTANRQPLTVRLDPDSKKLFSEQAEKCGLEPGVAARQILELYVQRLREGGDYIQTLADFSAALKSKAA*
Ga0066177_1057768313300004096Freshwater LakeMESLMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVHRLRESGDYIQTLSDFSQALKTRTA*
Ga0066181_1014029523300004123Freshwater LakeMESLMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA*
Ga0066180_1000453663300004128Freshwater LakeMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA*
Ga0066600_1024888323300004155FreshwaterMTKPANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSHAMKPKTA*
Ga0007787_1001462313300004240Freshwater LakeTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA
Ga0066599_10067984113300004282FreshwaterMSKTTNRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0069718_1444317863300004481SedimentMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSHAMKPKTV*
Ga0070687_10067896223300005343Switchgrass RhizosphereIAKTGAKTANRQPLTVRLDADSKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSSALRSQRAH*
Ga0068877_1004065723300005525Freshwater LakeMSKTANRQPLTVRLDPESKKLFAAEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRVA*
Ga0070734_1016621233300005533Surface SoilMSKGAPNREPLTVRLDPESKRLFSAEAEKCGLEPGVAARQILELYVQRLRSGGDYIQALAEIAAALKGRPV*
Ga0073902_1031867913300005656Activated SludgeMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSSALKTKAA*
Ga0078117_104789843300005758Lake WaterMSKTANRQPLTVRLDPESKRLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRAA*
Ga0075156_1002340563300005982Wastewater EffluentMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKPKTA*
Ga0081539_1018570213300005985Tabebuia Heterophylla RhizosphereMSKALAKTLAKTANRQPLTVRLDPDSKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSSALRSQRSA*
Ga0075152_1006982443300005986Wastewater EffluentMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGIAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0075160_1012801043300005988Wastewater EffluentMTKTANRQPLTVRLDPDSKRLFSEQAEACGLEPGVAARQILELYVQRLREGGDYIQTLADFSHAL
Ga0075012_1001491233300006033WatershedsMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKTKTA*
Ga0075012_1022946423300006033WatershedsVTKAANRQPLTVRLDPDSKRLFSEEAERCGLEPGVAARQILELYVQRLRESGDYIQTLADFSAALRSPRA*
Ga0075012_1084036823300006033WatershedsMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0073915_1006175223300006039SandMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKPRPL*
Ga0075163_1007992113300006056Wastewater EffluentMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0075163_1078866013300006056Wastewater EffluentMTQILKKAGTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSQALKTKAA*
Ga0075420_10082545823300006853Populus RhizosphereMSKAVTKNRQPLTVRLDPDSKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSSALRSQRAH*
Ga0073934_1015539733300006865Hot Spring SedimentMSRTANRQPLTVRLDPESKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQALKTKTA*
Ga0075429_10060301623300006880Populus RhizosphereMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKSSRPI*
Ga0079218_1305652313300007004Agricultural SoilMSKTANRQPLTVRLDPDSKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLAD
Ga0102977_111620543300007171Freshwater LakeMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRAA*
Ga0103958_117727343300007212Freshwater LakeMRSSMSKTANRQPLTVRLDPESKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKSKTA*
Ga0103959_123702933300007214Freshwater LakeMRSSMSKTANRQPLTVRLDPESKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSSAMKSKTA*
Ga0105105_1071095023300009009Freshwater SedimentMTKPANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLAD
Ga0105048_10002081153300009032FreshwaterMESPMTKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSHAMKPKSV*
Ga0105106_1006219253300009078Freshwater SedimentMESQMSKTTNRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0079224_10013253433300009095Agricultural SoilMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALRSSRAG*
Ga0115923_1087892863300009112Swimming Pool Sandfilter BackwashVTNAATKPANRQPLTVRLDPDSKRLFSEEAERCGLEPGVAARQILELYVQRLRESGDYIQTLADFSAALRSPRA*
Ga0114966_1006898953300009161Freshwater LakeMTKSANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKPRPL*
Ga0115925_1082748113300009354Swimming Pool Sandfilter BackwashMESPMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKTKT
Ga0116144_1026312823300009687Anaerobic Digestor SludgeMESPMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0116176_1000074843300009688Anaerobic Digestor SludgeMESQMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKPKTA*
Ga0116176_10001781193300009688Anaerobic Digestor SludgeMDSPMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGIAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0116176_1000769883300009688Anaerobic Digestor SludgeMDSPMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA*
Ga0116176_1025127023300009688Anaerobic Digestor SludgeMTKTANRQPLTVRLDPDSKRLFSEQAEACGLEPGVAARQILELYVQRLREGGDYIQTLADFSHALKSPRAG*
Ga0116152_1005431643300009779Anaerobic Digestor SludgeMVAPSVSKPANRQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKTKAA*
Ga0116156_10000195463300009780Anaerobic Digestor SludgeMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKRTA*
Ga0116156_1017941323300009780Anaerobic Digestor SludgeMESPMTQILKKAGTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSQALKTKAA*
Ga0116178_1001397263300009781Anaerobic Digestor SludgeMESLMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSSALKTKAA*
Ga0134121_1080378613300010401Terrestrial SoilVTKTPNRQPLTVRLDPDSKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSAALKKSA*
Ga0116241_1053417223300010429Anaerobic Digestor SludgeTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKRTA*
Ga0116241_1131988323300010429Anaerobic Digestor SludgeLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKPKTA*
Ga0133913_10030058173300010885Freshwater LakeMESEMTKTANRQPLTVRLDPESKKLFSAEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKPRPL*
Ga0133913_1188454123300010885Freshwater LakeMESSMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA*
Ga0120090_11708713300011918Mine Pit PondPMESLMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA*
Ga0123351_103075823300012973FecalMESPMTKTANRQPLTVRLDPDSKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKKTA*
Ga0164294_1000520083300013006FreshwaterMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVHRLRESGDYIQTLSDFSQALKTRTA*
(restricted) Ga0172373_1011399833300013131FreshwaterMSKTANREPLTVRLDPESKKLFAAEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKSRAA*
(restricted) Ga0172371_1023847113300013138FreshwaterMSKTANRQPLTVRLDPESEKLFAAEAEKCVLEPGVAARQILELYVQRLRESGDSIQTL
Ga0075316_109931513300014314Natural And Restored WetlandsMLPVSKTANRQPITVRLDPDSKRLFSEQAERCGLEPGVAARQILELYVQRLREGGDYIQTLADFSAALRQPRDH*
Ga0075356_100160163300014323Natural And Restored WetlandsMSKQVAKTANRQPLTVRLDPDSKKLFSEQAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSSALRSQRTH*
Ga0163144_10002613273300015360Freshwater Microbial MatMESLMSKASASKAGNRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA*
Ga0163144_1015529223300015360Freshwater Microbial MatMESPMSKRTTSRIGNRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTKAA*
Ga0169931_10000528573300017788FreshwaterMRSSMSKTANRQPLTVRLDPESKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSSAMKSKTA
Ga0190265_1239449223300018422SoilMSKTQNRQPLTVRLDPESKRLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALRSSRTG
Ga0190274_1069616433300018476SoilMSKTTNRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALRSSRAA
Ga0190264_1023285013300019377SoilMSKTTNRQPLTVRLDPDSKRLFAQEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADVSAALRSSRAA
Ga0193752_102855133300020027SoilMSKTTNRQPLTVRLDPDSKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRAA
Ga0163151_10000741243300020057Freshwater Microbial MatVTKTANRLPLTVRLDPDSKRLFTEQAERCGLEPGVAARQILELYVQRLREGGDYIQTLADFSSALKTPRSPKGPD
Ga0196976_113846013300020147SoilMSKASISKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALRRTA
Ga0211733_1089110223300020160FreshwaterMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA
Ga0211729_1081194623300020172FreshwaterMTKSANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA
Ga0163150_1046082323300020195Freshwater Microbial MatMESPMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRVA
Ga0163146_1019823013300020219Freshwater Microbial MatMSRLSNRVALTVRLDPEDKDFFAEHAERCGIEPSVAARQILELYVQRLRDGGDWI
Ga0210377_10001842103300021090Groundwater SedimentMSKITNRQPLTVRLDPESKRLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAAMKSSRSA
Ga0193706_105286113300021339SoilQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALRASRPA
Ga0226658_1052692913300022222Freshwater Microbial MatSLMSKASASKAGNRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA
Ga0247738_1007101513300023100Plant LitterQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKKTA
Ga0244777_1017850313300024343EstuarineTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA
Ga0244775_1076139813300024346EstuarineMTKTANREPLTVRLDPDSKRLFSAEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKPRPL
Ga0255181_101617523300024502FreshwaterMESVMSKTANRQPLTVRLDPESKKLFAAEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSAALKTRAA
Ga0255183_108169823300024515FreshwaterMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRAA
Ga0209172_1011300823300025310Hot Spring SedimentMSRTANRQPLTVRLDPESKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQALKTKTA
Ga0208492_1001689143300025526Serpentinite Rock And FluidMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA
Ga0208492_101245713300025526Serpentinite Rock And FluidMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA
Ga0208939_100257383300025772Anaerobic Digestor SludgeMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGIAARQILELYVQRLRESGDYIQTLADFSAALKTKAA
Ga0208939_1003353123300025772Anaerobic Digestor SludgeMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA
Ga0208939_100515693300025772Anaerobic Digestor SludgeMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKPKTA
Ga0208939_115798823300025772Anaerobic Digestor SludgeMESLMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSSALKTKAA
Ga0209717_104270923300025855Anaerobic Digestor SludgeMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKRTA
Ga0209311_128393413300025871Anaerobic Digestor SludgeMESQMSKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKPKTA
Ga0209311_135727523300025871Anaerobic Digestor SludgeMDSPMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA
Ga0255182_105455423300027503FreshwaterMESVMSKTANRQPLTVRLDPESKRLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRTA
Ga0209480_1036626623300027794Wastewater EffluentQLLMDSPMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGIAARQILELYVQRLRESGDYIQTLADFSAALKTKAA
Ga0209706_1031521833300027818Freshwater SedimentMSKTTNRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKA
Ga0209262_1007653133300027841FreshwaterMTKPANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSHAMKPKTA
Ga0209066_1004476923300027851WatershedsMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKTKTA
Ga0209181_10006757103300027878FreshwaterMTKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSHAMKPKSV
Ga0209550_1000375423300027892Freshwater LakeMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVHRLRESGDYIQTLSDFSQALKTRTA
Ga0209705_1008095533300027979Freshwater SedimentMSKTTNRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTKAA
Ga0255180_108952413300028073FreshwaterMESVMSKTANRQPLTVRLDPESKRLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALKTRAA
Ga0247823_1057561113300028590SoilMTKTANRQPLTVRLDPESKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQAL
Ga0247822_1191278623300028592SoilMSKTANRQPLTVRLDPDSKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALRSSRSA
Ga0307505_1001309643300031455SoilMTRTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSHAMKSKTA
Ga0307468_10000593823300031740Hardwood Forest SoilMTKTANRQPLTVRLDPDSKKLFSEQAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSAALKSKAA
Ga0315900_1001808473300031787FreshwaterMSKTANRQPLTVRLDPESKKLFAAEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRVA
Ga0315906_1037559623300032050FreshwaterMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRAA
Ga0315906_1060621513300032050FreshwaterKTANRQPLTVRLDPESKKLFAAEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRVA
Ga0315905_1004926013300032092FreshwaterVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVHRLRESGDYIQTLSDFSQALKTRTA
Ga0307415_10111334323300032126RhizosphereMTKTPNRQPLTVRLDPESKKLFSEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLADFSAALRSSRAA
Ga0315910_1123532513300032144SoilMSKTANRQPLTVRLDPDSKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSTALRSSRAH
Ga0315912_1006811843300032157SoilMSKTANRQPLTVRLDPDSKKLFAEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSAALRSSRVH
Ga0335397_1100679323300032420FreshwaterMESPMTKTANRQPLTVRLDPESKKLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSHAMKPKSV
Ga0334977_0025178_728_9523300033978FreshwaterMESSMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTV
Ga0334981_0134985_810_10343300033980FreshwaterMESYMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA
Ga0334994_0007851_1430_16423300033993FreshwaterMSKTANRQPLTVRLDPESKRLFSEEAEKCGLEPGVAARQILELYVQRLRESGDYIQTLADFSQAMKSKTA
Ga0334998_0072828_751_9633300034019FreshwaterMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTV
Ga0335036_0003901_6603_68273300034106FreshwaterMESYMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTV
Ga0370510_0213364_427_6003300034160Untreated Peat SoilMTKTANREPLTVRLDPDSKRLFSAEAEKCGLEAGVAARQILELYVQRLRESGDYIQTL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.