Metagenome / Metatranscriptome Family F069422

Basic Information
Family ID	F069422
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	51 residues
Representative Sequence	KSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG
Number of Associated Samples	117
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.81 %
% of genes from short scaffolds (< 2000 bps)	0.81 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.484 % of family members)
Environment Ontology (ENVO)	Unclassified (20.968 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.323 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.79% β-sheet: 19.48% Coil/Unstructured: 72.73%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF03734	YkuD	7.26
PF03401	TctC	3.23
PF07883	Cupin_2	3.23
PF04392	ABC_sub_bind	2.42
PF09084	NMT1	2.42
PF02371	Transposase_20	1.61
PF10503	Esterase_PHB	1.61
PF04909	Amidohydro_2	1.61
PF06863	DUF1254	1.61
PF13618	Gluconate_2-dh3	1.61
PF01227	GTP_cyclohydroI	0.81
PF01039	Carboxyl_trans	0.81
PF00005	ABC_tran	0.81
PF05694	SBP56	0.81
PF06035	Peptidase_C93	0.81
PF08924	DUF1906	0.81
PF02016	Peptidase_S66	0.81
PF01988	VIT1	0.81
PF13539	Peptidase_M15_4	0.81
PF00884	Sulfatase	0.81
PF07366	SnoaL	0.81
PF03466	LysR_substrate	0.81
PF12848	ABC_tran_Xtn	0.81
PF00111	Fer2	0.81
PF01165	Ribosomal_S21	0.81
PF00535	Glycos_transf_2	0.81
PF00080	Sod_Cu	0.81
PF01042	Ribonuc_L-PSP	0.81
PF00351	Biopterin_H	0.81
PF16326	ABC_tran_CTD	0.81
PF00775	Dioxygenase_C	0.81
PF09694	Gcw_chp	0.81
PF13458	Peripla_BP_6	0.81
PF01925	TauE	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	7.26
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	7.26
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.23
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.42
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.42
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.42
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.61
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.61
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.81
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.81
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.81
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.81
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.81
COG3186	Phenylalanine-4-hydroxylase	Amino acid transport and metabolism [E]	0.81
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.81
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.81
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.81
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.81

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300027915\|Ga0209069_10767219	Not Available	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.58%
Host-Associated	Host-Associated	27.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.71%
Plants	Host-Associated → Plants	27.42%
Aquatic	Environmental → Aquatic	8.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.10%
Marine	Environmental → Aquatic → Marine	4.84%
Freshwater	Environmental → Aquatic → Freshwater	2.42%
Roots	Host-Associated → Plants → Roots	2.42%
Sediment	Environmental → Aquatic → Sediment	1.61%
Peat	Environmental → Terrestrial → Peat	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.68%
Loam	Environmental → Terrestrial → Soil → Loam	17.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.03%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.61%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.81%
Coastal	Environmental → Aquatic → Marine → Coastal	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.61%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Oil-Contaminated Sediment	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment	0.81%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.84%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.23%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment → Mangrove Soil	0.81%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000734	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300002067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002495	454 Fosmid Sequence	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025554	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026807	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026852	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 62 (SPAdes)	Environmental	Open in IMG/M
3300026932	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 18 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029827	Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03436370	2199352025	Soil	ANVRILVQSGAWSSVDIDEDGNADGQVKTSDLTSSLATMPPWDPSL
JGI12535J11911_10067152	3300000734	Tropical Forest Soil	VRILVQSDAWSSVDIDEDGNPDGYVRTSDLTSNLATMPRWEPL*
JGI10220J13317_100101353	3300001139	Soil	GGGDRLGCKADNRVPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
JGI20195J14853_10208491	3300001402	Arctic Peat Soil	DIRVPRNANVRILVQSGAWSGVDIDEDGYADGQVRTSDLTSNLATMPPWGPSL*
JGI24746J21847_10452441	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	KSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG*
JGI24735J21928_100614493	3300002067	Corn Rhizosphere	DNRVPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
JGI24750J21931_10010285	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	LGCKADNRVPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
BRMGV_10634541	3300002495	Mangrove Soil	LINPRHCKRGDCVPRNANIRILAQSGGWYSVDIDEDGHPDGYVRASDLTSDLATMPPWERS*
JGI25405J52794_100813322	3300003911	Tabebuia Heterophylla Rhizosphere	DSRVARNTNVRILAQSGAWSGVDVDEDGVADGQVKTADLTSDLATMPPWG*
Ga0055458_100781982	3300004000	Natural And Restored Wetlands	PRNGNVRILAQSGDWAHVDIDEDGKPDGYVRTADLTPNLATMPPWKSS*
Ga0055498_100906061	3300004058	Natural And Restored Wetlands	NRVPRNANVRILVQSGAWSGVDIDEDGNPDGRVRTSDLTSDLATMPRWEPAS*
Ga0063356_1011382001	3300004463	Arabidopsis Thaliana Rhizosphere	ILAQSGAWCGVDVDEDGNADGQVRTADLTSNLATMPPWGSPS*
Ga0065712_1007006110	3300005290	Miscanthus Rhizosphere	RLGCKADNRVPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
Ga0070676_113210541	3300005328	Miscanthus Rhizosphere	QSGAWSSVDIDEDGNADGQVKTSDLTSSLVTMPPWDPSL*
Ga0066388_1077572751	3300005332	Tropical Forest Soil	GGGCKSDSRVPKNANVRVLAQSGEWSSVDVDEDGNRDGRIKLADLTASLATMPPWA*
Ga0068868_1017085941	3300005338	Miscanthus Rhizosphere	DRQGCKSDKSVPRNANVRILVQSGAWSSVYIDEDGNADGQVKTADLTSNLATMPPWG*
Ga0070692_110245082	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GGCKADSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0070693_1006122541	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	KNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0068857_1004363481	3300005577	Corn Rhizosphere	DKSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG*
Ga0066905_1004574833	3300005713	Tropical Forest Soil	CKSGNSVPRNSNVRILGQSGGWCSVDIDEDGNADGRIKTSDLTPSLAMMPPWQ*
Ga0066905_1020166301	3300005713	Tropical Forest Soil	QNCKSGNSVPRNSNVRILGQSGAWCNVDIDEDGNADGRIKTHDLTPSLATMPPWA*
Ga0066794_100382551	3300005947	Soil	QSGAWSGVDIDEDGNADGQVRTSDLTSNLATMPSWGPSS*
Ga0075024_1001242691	3300006047	Watersheds	VRILLQSGGWSSADIDEDGNPDGHVKTSDLTSNLATMPPWASPS*
Ga0070715_100130035	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	DSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0075367_110249732	3300006178	Populus Endosphere	ATAVVQEGGAGGCKSDSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0097621_1009036112	3300006237	Miscanthus Rhizosphere	GGGGSIDRQNCKSDNRVPRNANVRILAQSGAWSSVDIDEDGNADGQVKTSDLTSSLVTMPPWDPSL*
Ga0079220_104875153	3300006806	Agricultural Soil	GGGGSIDRQNCKTDNRVPRNANVRILQQSGAWCSVDVDEDGNADGQIKTSDLTSNLATMPPWGPVP*
Ga0075421_1018285342	3300006845	Populus Rhizosphere	NSVPRNSNVRILGQSSAWCSVDIDEDGTVDGRIKTSDLTPTLATMPPWA*
Ga0075425_1006524893	3300006854	Populus Rhizosphere	NVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0068865_1008015112	3300006881	Miscanthus Rhizosphere	GSIDRQNCKSDNRVPRNANVRILAQSGAWSSVDIDEDGNADGQVKTSDLTSSLVTMPPWDPSL*
Ga0075426_114688201	3300006903	Populus Rhizosphere	WSSVDIDEDGNADGQVKTSDLTSSLVTMPPWDPSL*
Ga0075436_1001206741	3300006914	Populus Rhizosphere	GGGGDRLGCKADNRVPKNANVRILVQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
Ga0075435_1012169761	3300007076	Populus Rhizosphere	ILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG*
Ga0066793_105884042	3300009029	Prmafrost Soil	CKSDIRVPRNANVRILVQSGAWSGVDIDEDGNADGQVRTSDLTSNLATMPPWGPSS*
Ga0111538_102440891	3300009156	Populus Rhizosphere	GAWSGVDVDEDGYADGQIRTVDLTPDLATMPPWGPTL*
Ga0105241_109934352	3300009174	Corn Rhizosphere	AWSSVDIDEDGNPDGHVKTADLTSNLAMMPPWGPSL*
Ga0126384_114983761	3300010046	Tropical Forest Soil	PKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0126382_108496681	3300010047	Tropical Forest Soil	RNTNVRILTQSGAWSGVDVDEDGIADGQVKTADLTSDLATMPPWG*
Ga0126370_106541871	3300010358	Tropical Forest Soil	VRVLAQSGEWSNVDVDEDGNPDGRIKLSDLTASLATMPPWA*
Ga0126376_106133591	3300010359	Tropical Forest Soil	QGCKPDSRVTRNNNVRVLAQSGAWCGVDVDEDGSVDGQIRTADLTPDLATMPPWGSPA*
Ga0126376_120446831	3300010359	Tropical Forest Soil	GGCKSDSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLSDLTANLATMPPWA*
Ga0126372_132361422	3300010360	Tropical Forest Soil	QESSAGGCKSDSRVPKNANVRVLAQFSEWSSVDVDEDGNPDGRIKLSDLTANLSTMPPWA
Ga0126377_116733202	3300010362	Tropical Forest Soil	ARNTNVRILAQSGAWSGVDVDEDGVADGQVKTADLTSDLATMPPWG*
Ga0126377_125189802	3300010362	Tropical Forest Soil	VRILGQSGAWCSVDIDEDGNADGRIKTSDLTSNLATMPPWQPS*
Ga0134125_108524382	3300010371	Terrestrial Soil	VPRNANVRILVQSGAWCGVDVDEDGNADGQVKTADLTSNLATMPPWGSPS*
Ga0134128_127790632	3300010373	Terrestrial Soil	VPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0105239_112302361	3300010375	Corn Rhizosphere	NANVRILAQSGAWSSVDIDEDGNADGQVKTSDLTSSLVTMPPWDPSL*
Ga0134124_105327413	3300010397	Terrestrial Soil	AQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0157332_10339261	3300012511	Soil	DRQGCKSDKSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG*
Ga0157352_10018043	3300012519	Unplanted Soil	SGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG*
Ga0157287_10119181	3300012885	Soil	RILAQSGAWSGVDVDEDGYTDGQVRTADLTSDLATMPPWGSS*
Ga0157299_102913461	3300012899	Soil	GGGGDRLGCKADNRVPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
Ga0157296_100020741	3300012905	Soil	NVRILVQSGAWSGVDIDEDGNPDGQVNTADLTPNLATMPPWGSPS*
Ga0157295_100008831	3300012906	Soil	NANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
Ga0157286_103740201	3300012908	Soil	NVRVLVQSGVWSGVDIDEDGNADGQVRTADLTSDLATMPAWG*
Ga0157310_100314221	3300012916	Soil	QSADAAGDRLGCKADNRVPKNANVRILVQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS*
Ga0153915_115153821	3300012931	Freshwater Wetlands	GGCKSDSRVPRNANVRILVQSGAWCGVDIDEDGIADGQVRTADLTSNLATMPPWGPSS*
Ga0164303_100133371	3300012957	Soil	VRILVQSGAWSSVDIDEDGNADGQVKTSDLTSSLATMPPWDPSL*
Ga0164299_116354702	3300012958	Soil	SGEWSSVDVDEDGNPDGRIKLSDLTASLTTMPPWA*
Ga0153916_129440422	3300012964	Freshwater Wetlands	RVPRNANVRILAQSGAWSSVDVDEDGNADGQVRTSDLTSNLATMPPWGQSS*
Ga0164307_101386912	3300012987	Soil	VARNNNVRVLAQSGAWSGVDIDEDGNIDGQVKTADLTPDLATMPPWGPAA*
Ga0164307_106734161	3300012987	Soil	ADAGGLIDRQGCKSDKSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG*
Ga0157369_120924532	3300013105	Corn Rhizosphere	ADGGGSIDRQICKSDNRVPKNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG*
Ga0157377_101606183	3300014745	Miscanthus Rhizosphere	GRQGCKPDKSVPRNANVRILVQSGAWCGVDVDEDGNADGQVKTADLTSNLATMPPWG*
Ga0173478_105155461	3300015201	Soil	RVPKNANVRILVQSGAWSGVDVDEDGNADGQVKTADLTSDLATMPPWGS*
Ga0132258_109910204	3300015371	Arabidopsis Rhizosphere	LVQSGAWSGVDIDEDGNPDGQIRTSDLTADLATMPPWG*
Ga0132256_1011727082	3300015372	Arabidopsis Rhizosphere	GCKSDSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA*
Ga0132257_1025662131	3300015373	Arabidopsis Rhizosphere	ADAGGLIDRQGCKSDKSVPRNANVRILVQSGAWSGVDIDEDGNPDGQVRTADLTSSLATMPPWG*
Ga0187825_103181892	3300017930	Freshwater Sediment	CKSDIRVPRNANVRVLLQSGAWSDVDIDEDGIADGQVRTSDLTSNLATMPPWGPSS
Ga0187785_100335541	3300017947	Tropical Peatland	NVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTASLATMPPWA
Ga0187778_110426872	3300017961	Tropical Peatland	MQSNDWCGVDIDEDGNVDGQIRTSDLTSNLATMPPWLPS
Ga0187787_101784301	3300018029	Tropical Peatland	VPRNANVRVLAQSGAWSGVDLDEDGIADGQVRTADLTSNLATMPPWGPS
Ga0187788_100106151	3300018032	Tropical Peatland	NVRILVQTGAWSGVDIDEDGNADGQIRTSDLTSNLATMPPWGSSS
Ga0187773_105864042	3300018064	Tropical Peatland	GSEHCNSGNRIPKNGNVRILAQSGEWCSVDIDEDGAPDGYVRTADLTSNLATMPPWKAS
Ga0187774_108231202	3300018089	Tropical Peatland	VVRQIAGAGGSLGPEHCNSGNRIPKNGNVRVLAQSGEWCSVDIDEDGTPDGYVRTADLTSNLATMPPWKLS
Ga0187774_110828821	3300018089	Tropical Peatland	RILVQTGAWSGVDIDEDGNADGQIRTSDLTSNLTTMPPWGSSS
Ga0182009_102009441	3300021445	Soil	RTTPVESGGSGNCKSDSRVPRNSNVRILVQSGAWSGVDIDEDGNVDGQVRTTDLTSDLATMPPWGPS
Ga0208587_10519623	3300025484	Arctic Peat Soil	QGCKSDIRVPRNANVRILVQSGAWSGVDIDEDGNADGQVRTSDLTSNLATMPPWGPSS
Ga0210060_10754492	3300025554	Natural And Restored Wetlands	ILAQSGDWAHVDIDEDGKPDGYVRTADLTPNLATMPPWKSS
Ga0207653_100771852	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LIDRQGCKSDKSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG
Ga0207653_102956411	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	IRATAVVLEGGAGGCKADSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0207692_103379952	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GSGNCKSDSRVPRNANVRILVQSGAWSGVDIDEDGNVDGQVRTADLTSDLATMPPWGPS
Ga0207685_100564041	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VQSGAWSSVDIDEDGNPDGHVKTADLTSNLAMMPPWGPSL
Ga0207699_104885492	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	QSGAWSSVDIDEDGNPDGHVKTADLTSNLAMMPPWGPSL
Ga0207693_103158362	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SGGGCKSDSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLSDLTASLTTMPPWA
Ga0207663_101952443	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TTPVESGGSGNCKSDSRVPRNANVRILVQSGAWSGVDIDEDGNVDGQVRTADLTSDLATMPPWGPS
Ga0207659_113848191	3300025926	Miscanthus Rhizosphere	VPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0207665_104948941	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GSCKPDSRVPRNANVRILVQSGAWFGVDIDEDGNVDGQVRTADLTSNLATMPPWGPS
Ga0207661_117044442	3300025944	Corn Rhizosphere	SRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0207679_119550522	3300025945	Corn Rhizosphere	GGGGSIDRQGCKPDSRVTRNNNVRVLAQSGAWCGVDVDEDGSVDGQIRTADLTPDLATMPPWGSPA
Ga0210071_10214282	3300025955	Natural And Restored Wetlands	GAWSGVDIDEDGNPDGRVRTSDLTSDLATMPRWEPAS
Ga0207658_114822811	3300025986	Switchgrass Rhizosphere	RILVQSGVWSGVDVDEDGVADGQVRTADLTSDLATMPPWGPS
Ga0207708_102605072	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GAWSSVDIDEDGNADGQVKTSDLTSSLVTMPPWDPSL
Ga0207674_111004432	3300026116	Corn Rhizosphere	QGCKSDKSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG
Ga0207675_1026676902	3300026118	Switchgrass Rhizosphere	EGGAGGCKADSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0207547_1059012	3300026807	Soil	IDRQGCKSDKSVPRNANVRILVQSGAWSSVDIDEDGNADGQVKTADLTSNLATMPPWG
Ga0207723_1007541	3300026824	Tropical Forest Soil	RNANLRILVQSGAWSSVDIDEDGNPDGYVRTSDLTSNFATMPPWEPS
Ga0207802_10208551	3300026847	Tropical Forest Soil	ENDGNSRGCKSDTRVPRNANIRILVQSGVWSDVDIDEDGNADGRVRTADLTSNLATMPPWGPS
Ga0207838_1086371	3300026852	Tropical Forest Soil	SDAWSSVDIDEDGNPDGYVRTSDLTSNLATMPRWEPL
Ga0207836_10362801	3300026932	Tropical Forest Soil	SGGGGGDRQSCKSDNRVPRNANVRILVQSGAWSDVDIDEDGNPDGYVRTSDLTSNFATMPPWEPS
Ga0207824_10340561	3300026990	Tropical Forest Soil	ESGGGGGDRQSCKSDNRVPRNANVRILVQSGAWSDVDIDEDGNVDGQVRTSDLTSNLATMPPWGPSS
Ga0209984_10040291	3300027424	Arabidopsis Thaliana Rhizosphere	GGGDRLGCKADNRVPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS
Ga0210002_100030210	3300027617	Arabidopsis Thaliana Rhizosphere	LGCKADNRVPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS
Ga0209966_10225253	3300027695	Arabidopsis Thaliana Rhizosphere	ADAGGGGSDRQNCKSDSRVPKNANVRILVQSGAWSGVDVDEDGNADGQVKTADLTSDLATMPPWG
Ga0209811_103736592	3300027821	Surface Soil	KNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0209813_104666631	3300027866	Populus Endosphere	VPKNANVRILAQSGAWSGVDVDEDGYADGQVRTADLTSDLATMPPWGSS
Ga0209069_107672192	3300027915	Watersheds	VRILAQSGAWSGVDIDEDGIADGQVRTSDLTSNLATMPPWGSSS
Ga0134606_101873992	3300029827	Marine Sediment	HGGLIDRKHCSSGNRIPRNGNVRILAQSGDWSSVDIDEDGKPDGYVRTSDLTFDLATMPPWKPS
Ga0075386_113038191	3300030916	Soil	RNANVRILVQSGAWSSVDIDEDGNADGQVKTSDLTSSLATMPPWDPSL
Ga0307506_101501001	3300031366	Soil	GAWSGVDIDEDGYADGQVRTSDLTSDLATMPPWGPS
Ga0170819_105449871	3300031469	Forest Soil	ILVQSGAWSGVDIDEDGYADGQVRTSDLTSDLATMPPWGPS
Ga0170819_155808483	3300031469	Forest Soil	RILVQSGAWSSVDIDEDGNADGQVKTSDLTSSLATMPPWDPSL
Ga0307468_1000265784	3300031740	Hardwood Forest Soil	VPKNANVRVLAQSGEWSSADVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0318546_108892442	3300031771	Soil	AWSSVDIDEDGNPDGYVRTSDLTSNFATMPPWEPS
Ga0318529_104363481	3300031792	Soil	VVQESSAGGCKSDSRVPKNANVRVLAQSSEWASVDVDEDGNPDGRIKLSDLTANLSTMPPWA
Ga0318568_106555511	3300031819	Soil	SSEWASVDVDEDGNPDGRIKLSDLTANLSTMPPWA
Ga0310900_101253104	3300031908	Soil	RLGCKPDKSVPRNANVRILVQSGAWSGVDIDEDGNPDGQVRTADLTSSLATMPPWG
Ga0310897_104849662	3300032003	Soil	VRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0307471_1015573642	3300032180	Hardwood Forest Soil	SSGGGCKSDSRVPKNANVRVLAQSGEWSSVDVDEDGNPDGRIKLADLTTSLATMPPWA
Ga0335084_107249151	3300033004	Soil	ESGVGGSCKPDSRVPRNANVRILAQSGAWSGVDIDEDGYADGQVRTSDLTSDLATMPPWGPSS
Ga0316624_102472931	3300033486	Soil	RNANVRILAQSGAWSGVDIDEDGNADGQVRTSDLTSNLATMPPWGPSS
Ga0316628_1011892233	3300033513	Soil	WSGVDIDEDGNADGQVRTADLTSNLATMPPWGSPS
Ga0326723_0075751_320_508	3300034090	Peat Soil	MVDRQNCKSDNRVPRNANVRILVQSGAWSGVDIDEDGNPDGRVRTSDLTSNLTTMPPWEPSS
Ga0370501_0095549_2_208	3300034195	Untreated Peat Soil	QVVQESGGDRLGCKSDIRVPRNANVRVLVQSGAWCSVDIDEDGNADGQVKTSDLTANLETMPPWGPSS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069422

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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