Metagenome / Metatranscriptome Family F068101

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068101
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	109 residues
Representative Sequence	MTQRNSDEHERSAAGLDFDPGEIRDKAEALGAKMVQEGPEALLDEIENLLPEAWRDQISAFPMAAVALGVGVGIWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKGG
Number of Associated Samples	102
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.40 %
% of genes near scaffold ends (potentially truncated)	21.60 %
% of genes from short scaffolds (< 2000 bps)	69.60 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.000 % of family members)
Environment Ontology (ENVO)	Unclassified (33.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.32% β-sheet: 0.00% Coil/Unstructured: 37.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF05957	DUF883	15.20
PF00005	ABC_tran	9.60
PF12704	MacB_PCD	6.40
PF13365	Trypsin_2	3.20
PF13180	PDZ_2	1.60
PF13354	Beta-lactamase2	1.60
PF14559	TPR_19	1.60
PF13555	AAA_29	1.60
PF01351	RNase_HII	0.80
PF12833	HTH_18	0.80
PF01863	YgjP-like	0.80
PF04085	MreC	0.80
PF00781	DAGK_cat	0.80
PF00572	Ribosomal_L13	0.80
PF07479	NAD_Gly3P_dh_C	0.80
PF14716	HHH_8	0.80
PF10137	TIR-like	0.80
PF00754	F5_F8_type_C	0.80
PF01850	PIN	0.80
PF03712	Cu2_monoox_C	0.80
PF01738	DLH	0.80
PF07143	CrtC	0.80
PF03099	BPL_LplA_LipB	0.80
PF13439	Glyco_transf_4	0.80
PF04055	Radical_SAM	0.80
PF14332	DUF4388	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	15.20
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.60
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	0.80
COG0102	Ribosomal protein L13	Translation, ribosomal structure and biogenesis [J]	0.80
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	0.80
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.80
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	0.80
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.80
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	0.80
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.80
COG1792	Cell shape-determining protein MreC	Cell cycle control, cell division, chromosome partitioning [D]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	62.40 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.40 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.80 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.40 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.40 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.40 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.40 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	0.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.40 %
Clostridium sp. 7_3_54FAA	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. 7_3_54FAA	0.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.80 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_6289282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300000833\|JGI12273J12029_10038347	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300000956\|JGI10216J12902_103133513	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300000956\|JGI10216J12902_103133514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1399	Open in IMG/M
3300000956\|JGI10216J12902_107625914	All Organisms → cellular organisms → Bacteria	2488	Open in IMG/M
3300002896\|JGI24802J43972_1022067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. 7_3_54FAA	522	Open in IMG/M
3300003313\|P32013IDBA_1033300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1615	Open in IMG/M
3300003319\|soilL2_10193329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4605	Open in IMG/M
3300003366\|JGI25321J50212_10117500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300004156\|Ga0062589_101979638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300004157\|Ga0062590_101951844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300004463\|Ga0063356_100599463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1488	Open in IMG/M
3300004798\|Ga0058859_10981632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300005093\|Ga0062594_103160001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300005293\|Ga0065715_10299456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300005295\|Ga0065707_10135113	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300005295\|Ga0065707_10620665	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005340\|Ga0070689_101865142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005340\|Ga0070689_102228645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005343\|Ga0070687_100027082	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300005343\|Ga0070687_101384759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005354\|Ga0070675_100000030	All Organisms → cellular organisms → Bacteria	100523	Open in IMG/M
3300005354\|Ga0070675_101819413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005356\|Ga0070674_100120328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1943	Open in IMG/M
3300005441\|Ga0070700_100000009	All Organisms → cellular organisms → Bacteria	181474	Open in IMG/M
3300005441\|Ga0070700_100418792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300005444\|Ga0070694_101801423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300005457\|Ga0070662_100473778	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005459\|Ga0068867_101592286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300005466\|Ga0070685_10009870	All Organisms → cellular organisms → Bacteria	4950	Open in IMG/M
3300005471\|Ga0070698_101909297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300005518\|Ga0070699_100084977	All Organisms → cellular organisms → Bacteria	2762	Open in IMG/M
3300005615\|Ga0070702_100043946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2520	Open in IMG/M
3300005615\|Ga0070702_100850633	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005836\|Ga0074470_11588414	All Organisms → cellular organisms → Bacteria	5394	Open in IMG/M
3300005840\|Ga0068870_10025290	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300006031\|Ga0066651_10000122	All Organisms → cellular organisms → Bacteria	22021	Open in IMG/M
3300006169\|Ga0082029_1638247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300006169\|Ga0082029_1702782	All Organisms → cellular organisms → Bacteria	27342	Open in IMG/M
3300006196\|Ga0075422_10043836	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300006353\|Ga0075370_10855872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300006844\|Ga0075428_100001387	All Organisms → cellular organisms → Bacteria	25803	Open in IMG/M
3300006844\|Ga0075428_101311373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300006844\|Ga0075428_102526388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300006845\|Ga0075421_100001590	All Organisms → cellular organisms → Bacteria	26731	Open in IMG/M
3300006847\|Ga0075431_101551932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300006871\|Ga0075434_100111632	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300006871\|Ga0075434_102462497	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006876\|Ga0079217_11265272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006880\|Ga0075429_101517153	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300006918\|Ga0079216_10454080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300007004\|Ga0079218_10674211	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300007004\|Ga0079218_12860444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300009176\|Ga0105242_10007569	All Organisms → cellular organisms → Bacteria	8360	Open in IMG/M
3300009609\|Ga0105347_1207663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300010044\|Ga0126310_10012488	All Organisms → cellular organisms → Bacteria	4005	Open in IMG/M
3300010045\|Ga0126311_10575213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300010399\|Ga0134127_10116375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2372	Open in IMG/M
3300010399\|Ga0134127_12251822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300010403\|Ga0134123_10000872	All Organisms → cellular organisms → Bacteria	19900	Open in IMG/M
3300010403\|Ga0134123_11584593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300011410\|Ga0137440_1060657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300012040\|Ga0137461_1039142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300012228\|Ga0137459_1135219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300013306\|Ga0163162_11725647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300014310\|Ga0075331_1126938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300014487\|Ga0182000_10022361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1685	Open in IMG/M
3300014877\|Ga0180074_1017358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300017965\|Ga0190266_10194356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300018429\|Ga0190272_10000279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29359	Open in IMG/M
3300018432\|Ga0190275_10000117	All Organisms → cellular organisms → Bacteria	93772	Open in IMG/M
3300018465\|Ga0190269_11899587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300018466\|Ga0190268_10693469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300018469\|Ga0190270_10485178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300018469\|Ga0190270_11253830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300019377\|Ga0190264_10885158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300019377\|Ga0190264_11927238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300019767\|Ga0190267_11497132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300020146\|Ga0196977_1000030	All Organisms → cellular organisms → Bacteria	105574	Open in IMG/M
3300020147\|Ga0196976_1000060	All Organisms → cellular organisms → Bacteria	70360	Open in IMG/M
3300021184\|Ga0196959_10006089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300021289\|Ga0213903_110593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300021339\|Ga0193706_1043061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300021358\|Ga0213873_10000001	All Organisms → cellular organisms → Bacteria	1657979	Open in IMG/M
3300021968\|Ga0193698_1026788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300025324\|Ga0209640_10374448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300025728\|Ga0207655_1067412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
3300025908\|Ga0207643_10046278	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300025918\|Ga0207662_10001534	All Organisms → cellular organisms → Bacteria	11260	Open in IMG/M
3300025930\|Ga0207701_10097561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2639	Open in IMG/M
3300025933\|Ga0207706_10564736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300025934\|Ga0207686_10004437	All Organisms → cellular organisms → Bacteria	7523	Open in IMG/M
3300025936\|Ga0207670_10859923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300025937\|Ga0207669_10122617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1768	Open in IMG/M
3300026075\|Ga0207708_10000003	All Organisms → cellular organisms → Bacteria	324662	Open in IMG/M
3300026089\|Ga0207648_11394520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300026118\|Ga0207675_100105020	All Organisms → cellular organisms → Bacteria	2662	Open in IMG/M
3300026306\|Ga0209468_1000013	All Organisms → cellular organisms → Bacteria	125014	Open in IMG/M
3300027640\|Ga0209347_1005909	All Organisms → cellular organisms → Bacteria	11259	Open in IMG/M
3300027907\|Ga0207428_10000008	All Organisms → cellular organisms → Bacteria	423201	Open in IMG/M
3300027909\|Ga0209382_10000652	All Organisms → cellular organisms → Bacteria	56325	Open in IMG/M
3300028578\|Ga0272482_10098288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300030510\|Ga0268243_1027154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300030533\|Ga0247632_1004149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300030988\|Ga0308183_1088417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300031093\|Ga0308197_10308061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300031123\|Ga0308195_1019870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300031123\|Ga0308195_1020307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300031123\|Ga0308195_1039669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300031164\|Ga0307502_10061638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300031455\|Ga0307505_10001229	All Organisms → cellular organisms → Bacteria	21829	Open in IMG/M
3300031481\|Ga0314816_1021618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300031481\|Ga0314816_1039697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300031740\|Ga0307468_100231182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300031740\|Ga0307468_101457712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300032002\|Ga0307416_102460689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300032002\|Ga0307416_103327320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300032005\|Ga0307411_11648661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300034008\|Ga0334942_001046	All Organisms → cellular organisms → Bacteria	10963	Open in IMG/M
3300034025\|Ga0334940_122176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300034146\|Ga0334964_000224	All Organisms → cellular organisms → Bacteria	33715	Open in IMG/M
3300034146\|Ga0334964_007447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1822	Open in IMG/M
3300034147\|Ga0364925_0115989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300034173\|Ga0334925_000087	All Organisms → cellular organisms → Bacteria	62294	Open in IMG/M
3300034194\|Ga0370499_0129371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.00%
Host-Associated	Host-Associated	28.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.60%
Plants	Host-Associated → Plants	27.20%
Aquatic	Environmental → Aquatic	6.40%
Human	Host-Associated → Human	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.20%
Sediment	Environmental → Aquatic → Sediment	4.80%
Freshwater	Environmental → Aquatic → Freshwater	1.60%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.60%
Floodplain	Environmental → Terrestrial → Floodplain	0.80%
Digestive System	Host-Associated → Human → Digestive System	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.40%
Loam	Environmental → Terrestrial → Soil → Loam	12.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.80%
Sand	Environmental → Terrestrial → Soil → Sand	3.20%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	2.40%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%
Clay	Environmental → Terrestrial → Deep Subsurface → Clay	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.80%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.80%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.80%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.40%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.60%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.60%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.80%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.80%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.80%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.60%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.60%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.60%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.60%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.60%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.80%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	0.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.80%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.80%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.80%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.80%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000833	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate C) 0C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300003313	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sample	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003366	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300021289	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_3	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027640	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030533	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031481	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034146	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNS	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0258.00004190	2162886012	Miscanthus Rhizosphere	MATERSSDAHERSAAGLDYDDGDPIRSNAAALGAKMLEEGPEALFNELENLLPEQWRDQIRAFPIAAVVLGVGVGVWLGMKKSDEIISAGGALVTSAAMANVSQVMDKFKQD
JGI12273J12029_100383472	3300000833	Soil	MATQRSSDEHERSAAGLDFDDPDSIRNNAAALGAKIIDEGPDVLFDELENLLPESWRDQIRAFPVAAVAVGIGVGIWLGMKKSDDILAAGSALVSSAAMANVSQVMEKMQKQG*
JGI10216J12902_1031335134	3300000956	Soil	MAPRDPDQHERSAAGLDFDDGAIREKAEALGAKMIQEGPEALLDEIENLLPDSWRDQIRAFPVAAVALGLGVGIWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVRGE*
JGI10216J12902_1031335141	3300000956	Soil	MAERDPDQYERSAAGLDFDEGTIRDKAGELGAKMMEGPEALLDEIENLLPEAWRDQIRSYPIVAVALGVGIGIWLGAKKSDEIIAAGSSLVSAAAMANVSAVMDKVKG*
JGI10216J12902_1076259142	3300000956	Soil	MPKRSPDEHERSAAGLDFDDQAAGLKDKAASLGAKMVEGGPGAVLDEIEELLPEEWREHIRTFPITAVAIGVGVGLWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKGEG*
JGI24802J43972_10220671	3300002896	Soil	PYPGEHERSAAGLDFDESAIRESAAAWGQRMVQEGPEALFDEIENLLPEQWRDQIKTFPLAAVALGVGVGLWLGMKKSDEVIAAGTSLISAAAMANVSQVVDKVKNG*
P32013IDBA_10333002	3300003313	Ore Pile And Mine Drainage Contaminated Soil	MATQRSSDAYERSAAGLDFDDGDPFRSNAAALGAKMLDEGPEALFNELENLLPEAWRDQIRAFPIAAVVLGVGVGVWLGMKKSDEIIAAGGALVSSAAMANVSQVMDKFKA*
soilL2_101933293	3300003319	Sugarcane Root And Bulk Soil	MATRSTDDHERSAAGLDFEEGAMRDNAASLGAKMIEEGPEALFDELENLLPEAWREHIRSFPVAAMCIGVGVGIWLGMKKSDEIIAAGTSMVSAAAMANVSQVMDKVRG*
JGI25321J50212_101175001	3300003366	Deep Subsurface	MSERFPDEHERAAAGLDFDTSALFENAAEWGTRMIENGPEALLDEIEEMLPEAWREQIQTFPIVAVALGFGVGVFLGMKKSHEVIAAGTSLVSAAAMANVNQVMDKVKEGR*
Ga0062589_1019796381	3300004156	Soil	MPERSPDEHERAAAGLDYDEQESKRGQATSLGVKMAEQGPEAFFEEIENLLPEAWREQIKQFPIAAVVLGVGVGMWLGMKKGDELLAAGGSMVSAAAMANVSQVMEKIRPS
Ga0062590_1019518442	3300004157	Soil	MARGFPEDHERAAAGLDFEDDPVRNGAASLGAKMAEGPEAFMDEIESLLPESWREHIQQFPIAAVALGVGIGVWLGLKKSDEVIAAGTALISSAAMSNVSQVMDKMKGDA*
Ga0063356_1005994632	3300004463	Arabidopsis Thaliana Rhizosphere	MSRRYPDQHERAAAGLDLDEGAIRDSAAAMGAKMIEEGPGVLLDEIENLLPEEWREHIRAYPVAAMALGIGVGIWLGMRKSDEILAAGSSLVSAAAMANVTQVMDKFKQG*
Ga0058859_109816321	3300004798	Host-Associated	MATRFGDEYERSAAGLDFDDPSVIREKAASFGQKIVEEGPDVLLDEIENLLPETWRDHIRSFPIAALAVGVGVGVWLGMKKSDEIIAAGGSMVTAAAMANVSQVMDRVKGGGS*
Ga0062594_1031600012	3300005093	Soil	DPLRNGAASLGARFAEGPEALLDEIENLLPESWREHIRQFPIAAVAIGLGVGLWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKVKGGA*
Ga0065715_102994561	3300005293	Miscanthus Rhizosphere	MATERSSDAHERSAAGLDYDDGDPIRSNAAALGAKMLEEGPEALFNELENLLPEQWRDQIRAFPIAAVVLGVGVGVWLGMKKSDEIISAGGALVTSAAMANVSQVMDKFKQD*
Ga0065707_101351133	3300005295	Switchgrass Rhizosphere	MAERDPDQYERSAAGLDFDDGTIRDKAEGLGAKIMEGPEALLDEIENLLPEAWREQIRAYPVVAMVLGVGVGVWLGMKKSDEIIAAGSSLVSAAAMANVSQVMDKVKG*
Ga0065707_106206651	3300005295	Switchgrass Rhizosphere	MPNRFPDDHERSAAGLDFEEGDPMHDRAASLGQKMVEEGPSAIFDEIENLLPEAWREHIRTFPIAAVAIGLGVGVWLGMKKSDEVIAAGSSLVSAAAM
Ga0070689_1018651422	3300005340	Switchgrass Rhizosphere	PEDHERSAAGMDYEDDPLRNGAASLGAKIAEEGPEALLDEIENLLPESVREHVQAFPLAAVALGVGVGIWLGMKKSEEIIAAGTALVSSAAMANVSQVMDKVKGGA*
Ga0070689_1022286452	3300005340	Switchgrass Rhizosphere	MAERDPDQHERSAAGLDFDDGGTIRDKAEELGAKMLEGPEALLDEIENLLPEAWRDQIRAYPVVAMALGLGIGIWLGMKKSDEIIAAGSSLVSAAAMANVSAVIDKVKG*
Ga0070687_1000270822	3300005343	Switchgrass Rhizosphere	MAQGYPDQRERSAAGLDFDDPGAIRDKAAAMGARMVEEGPEAVLDEIEQLLPEAWRDQIRSFPLAAVALGIGVGVWLGMKKSEEIITAGGSLVSAAAMANVNQVMDKMKQG*
Ga0070687_1013847591	3300005343	Switchgrass Rhizosphere	MATRNTDDYERSAAGLDFEDGGAMREKAEALGAKMVQEGPEVLLDEIENLLPEAWRDQIRAFPVAAMALGLGVGIWLGMKKSEEIIAAGTSLVSAAAMANVSQVMDKVKG*
Ga0070675_10000003023	3300005354	Miscanthus Rhizosphere	MARGFPEDHERAAAGLDFEDDPVRNGAASLGAKMAEGPEAFMDEIESLLPESWREHIQQFPIAAVALGLGIGVWLGLKKSDEVIAAGTALISSAAMSNVSQVMDKMKGDA*
Ga0070675_1018194131	3300005354	Miscanthus Rhizosphere	QRSSDSHERSAAGLDYDDGDPIRGNAAALGAKMLEEGPEALFNELENLLPEQWRDQIKAFPIAAVVLGVGVGVWLGMKKSDEIISAGGALVSSAAMANVSQVMDKFKS*
Ga0070674_1001203283	3300005356	Miscanthus Rhizosphere	MTKGYSSDEYERSAAGLDYDEGDGMRDNAAKLGAKMVEDGPQALLDEIENLLPEAWREQIQTFPIAAVVLGVGVGLWLGLKKSDEIIAAGGALVTSAAMANVSQVMEKFQKG*
Ga0070700_10000000943	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MANGFPEDHERSAAGLDFEDDPIRAGAASLGAKMVENGPEAVLDEIENLLPESWREQIQSFPIAAVALGIGIGVWLGMKKSEEIIAAGTALVSSAAMANVSQVMDKVKGGA*
Ga0070700_1004187922	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRDPDQYERSAAGLDFDDGTIRDKAEELGAKMMEGPEALLDEIENLLPEAWREQIRAYPIVAMALGVGIGIWLGAKKSDEIIAAGSSLVSAAAMANVSAVMDKVKGS*
Ga0070694_1018014231	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAKGSPDDHERSAAGLDFEDDPLRNGAASLGARFAEGPEALLDEIENLLPESWREHIRQFPIAAVAIGLGVGLWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKVKGGA*
Ga0070662_1004737781	3300005457	Corn Rhizosphere	MATRNSDEYERSAAGLDFDAGGIRDKAEALGAKMVQEGPEALLDEIENLLPEAWRDQIKAFPVLAVALGVGVGVWLGMKKSDEIIAAGTSLVSAAAMANVSQVMEKVKGA*
Ga0068867_1015922862	3300005459	Miscanthus Rhizosphere	MAKGFPEDHERAAAGLDFEDDPVRNGAASLGAKMAEGPEAFMDEIESLLPESWREHIQQFPIAAVALGVGVGLWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKMKGDA*
Ga0070685_100098705	3300005466	Switchgrass Rhizosphere	MAQGDPDQRERSAAGLDFDDPGGIRDKAAAMGERMVEEGPEVLLDEIENLLPEAWRDQIKSYPLAAVLLGVGVGLWLGMKKSDEIITAGSSLVSAAAMANVNQVMDKMKQG*
Ga0070698_1019092972	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSKGSPDDHERAAAGLDFEEDPLRNGASSLGAKIAEDGPDAIFDAIEDLLPDSWREQIKAYPVAAVAIGVGVGIWLGMKKSDEIIAAGTALISSAAMSNVSQVMDK
Ga0070699_1000849776	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAKGFPEDHERSAAGLDFEDDPIRNGAASLGAKMVENGPEAVLDEIENLLPESVREQVQAFPLAAVALGVGIGVWLGMKKSEEIIAAGTALVSSAAMANVSQVMDKVKGGA*
Ga0070702_1000439463	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MAKQSSDDHERAAAGLDFEDDPLRNGAANLGAKIAEEGPGALLDEIEELLPESWREHIEAYPLAAIALGVGVGIWLGMKKSEEIIAAGTALVSSVAMSNVTNVMDKMKGDA*
Ga0070702_1008506332	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSKGSPDDHERSAAGLDFEDDPLRSGAASLGARFAEGPEAVLDEIENLLPESWREHIREFPIAAVAIGLGVGLWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKVKGGA*
Ga0074470_115884143	3300005836	Sediment (Intertidal)	MTTTRTTDEHERSAAGLDFEEEGGAHERAGSLGAKIVEEGPEAFLNEIENLLPEAWREHIRSFPIAAVVLGLGAGLWLGMKKSDEVISAGTSLISAAAMANVTQVMDRMKQG*
Ga0068870_100252903	3300005840	Miscanthus Rhizosphere	MARDIPEDHERSAAGMDYEDDPVRNGAASLGAKIAEEGPEAILDEIENLIPENWREQIQAFPFAAIALGVGVGIWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKVRGDA*
Ga0066651_100001228	3300006031	Soil	MARESSEDHERAAAGLDFEEDPLRSGAANLGAKIAEEGPEALLDEIEELLPESWREHIEAYPLAAIALGVGVGIWLGMKKSQEIIAAGTALVSSVAMSNVSQVMDKVKGGA*
Ga0082029_16382471	3300006169	Termite Nest	MASRNFSDEHERSAAGLDYDEYSSVRENAAKLGAKMVEDGPEALLDEIENLLPEAWRDQIRAFPLAAVLVGVGVGVWLGMKKSDEIIAAGGSLVSAAAMANISQVIDRFKQ*
Ga0082029_170278212	3300006169	Termite Nest	MATNRSRDEHERSAAGLDYDNAAGLRENAANIGQKMIEHPDQILDEIENLLPEEWREHIRTFPVAAVALGVGIGVWLGMKKSDEIIAAGTSLVSAAAMANVTQVMDRVKGGGS*
Ga0075422_100438363	3300006196	Populus Rhizosphere	MAERDPDQYERSAAGLDFDDGNLRDKAEELGAKMLEGPEALLDEIENLLPEAWRDQIRTYPVVAMALGLGIGIWLGMKKSDEIIAAGSSLVSAAAMANVSAVMDKVKG*
Ga0075370_108558721	3300006353	Populus Endosphere	MAERDPDEYERSAAGLDFDDGTIRDKAEGLGAKIMEGPEALLDEIENLLPEAWREQIRAYPVVALALGVGVGVWLGMKKSDEIIAAGSSLVSAAAMANVSQVMDKVKG*
Ga0075428_10000138722	3300006844	Populus Rhizosphere	MATRSTPDDHERAAAGQDFDENHMNDRASEYGTRMAEEGPNVLFEELENLMPEAWRDQIRAYPVAAMLLGLGIGVWLGMKKSDEIISAGSSLVSAAAMANVGQVMDRFKQ*
Ga0075428_1013113732	3300006844	Populus Rhizosphere	LRLMTQRDPDQYERSAAGLDFDDGTIRDKAEELGAKMMEGPEALLDEIENLLPEAWREQIRAYPIVAMALGVGIGIWLGAKKSDEIIAAGSSLVSAAAMANVSAVMDKVKGS*
Ga0075428_1025263881	3300006844	Populus Rhizosphere	MPREFSDDHERSAAGLDFEDDPLRNGASSLGAKIAEEGPEALLDAIENLLPESWRQQIEAYPLAAIAVGLGVGLWLGMKKSEEVIAAGTALASSL
Ga0075421_1000015902	3300006845	Populus Rhizosphere	MTAQRNSSDEHERAAAGLDYDEQSSVHDGAAKLGAKMVEQPEALLDEIENLLPEAWRDQIRAFPLAAIAIGVGVGVFLGMKKSDEIIAAGGSLISAAAMANVSEVMDRMKG*
Ga0075431_1015519322	3300006847	Populus Rhizosphere	MATRTTPDDHERAAAGQDFDENNPMNDRASEYGSRIAEEGPGALFEELENLMPEAWRDQIRTYPIAALLLGLGVGVWLGMKKSDEIIAAGSSLVSAAAMANVGQVMDRFKQ*
Ga0075434_1001116323	3300006871	Populus Rhizosphere	MAKQSPEDHERAAAGLDFEEDPLRNGAANLGAKIAEEGPEALLDEIEELLPESWREQIEAYPLAAIALGVGVGIWLGMKKSDEIIAAGTALVSSVAMSNVSQVMDKMKGDA*
Ga0075434_1024624971	3300006871	Populus Rhizosphere	MARGFPEDHERAAAGLDFEDDPLRNGAASLGAKMAEGPEAFLDEIENLLPESWREHIAAFPIAAVALGLGVGVWLGWKKSDEVIAAGTALISSAAMANVSQVMDKVKGGA*
Ga0079217_112652722	3300006876	Agricultural Soil	MPKRSPDEHERSAAGLDFDEQGGIRDKAASLGAKMVEGGPGAVLDEIESLLPEEWREHIRTFPITAVALGLGVGVWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKGED*
Ga0075429_1015171532	3300006880	Populus Rhizosphere	AGLDFDDGTIRDKAEELGAKMMEGPEALLDEIENLLPEAWREQIRAYPIVAMALGVGIGIWLGAKKSDEIIAAGSSLVSAAAMANVSAVMDKVKGS*
Ga0079216_104540802	3300006918	Agricultural Soil	EDMAQRNSDEHERSAAGLDFDASEIRDKAEALGAKMVQEGPEALLDEIENLLPEAWRDQISAFPIAAVALGVGVGIWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKG*
Ga0079218_106742112	3300007004	Agricultural Soil	MAERDPDQHERSAAGLDFDDGTIRDKAEELGAKMMEGPEALLDEIENLLPEAWREQIRSYPIVALTLGVGIGIWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKGS*
Ga0079218_128604442	3300007004	Agricultural Soil	MATQNTSDHERSAAGLDFDDPDSWRSNAAALGAKVIEEGPDALFDELENLLPESWRDQIQTFPIAAVALGVGIGVWLGMKKSDEIITAGGALVTSAAMANVSQVMEKFKG*
Ga0105242_100075694	3300009176	Miscanthus Rhizosphere	MPKDFPEDHERAAAGLEFDEDPLRNGAASLGAKFAEEGPEALLDEIENLLPESWREQIQAFPIVAVALGLGVGVWLGMKKSDEVIAAGTALISSAAMSNISQVMDKVKGGA*
Ga0105347_12076631	3300009609	Soil	MTAQRNSDEHERAAAGLDYDEQSSVRDGAAKLGAKMAEEPEALLDEIENLLPEAWRDQIRAFPLAAVAIGVGVGVFLGMKKSDEIIAAGGSLISAAAMANVSEVMDRMKG*
Ga0126310_100124884	3300010044	Serpentine Soil	MARDFSENHERSAAGLDFEDDPLRNHAKSLGQKMAAEGPEAVLDEIENLLPESWRDHIQAFPMAAVALGVGVGIWLGLNKSDEVIAAGTALVSSAAMSNVSQVMDKVKGGA*
Ga0126311_105752131	3300010045	Serpentine Soil	DHERSAAGLDFDEHAGIRDGAAALGAKMVEGGPEAMLDEIENLLPEEWREHIRTFPLAAVAVGVGLGVWLGMKKSDEIIAAGSSLVSAAAMANVSQVMDKVKGGGS*
Ga0134127_101163754	3300010399	Terrestrial Soil	MDYEDDPVRNGAASLGAKIAEEGPEAILDEIENLIPENWREQIQAFPFAAIALGVGVGIWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKVRGD
Ga0134127_122518221	3300010399	Terrestrial Soil	MTQRDPDQYERSAAGLDFDDGTIRDKAEELGAKMMEGPEALLDEIENLLPEAWRDQIRAYPIVAMALGVGIGIWLGAKKSDEIIAAGSSLVSAAAMANVSAVMDKVKGS
Ga0134123_1000087210	3300010403	Terrestrial Soil	MPIPEDHERSAAGLDFEDDPIRNGAASLGAKMVENGPEAVLDEIENLLPESWREHIQAYPLAAVALGLGIGVWLGMKKSEEIIAAGTAMVSSAAMANVSQVMDKMKGDA*
Ga0134123_115845932	3300010403	Terrestrial Soil	MATRNPEDHERSAAGMDFEEDPIRDRASSLGAAMAEGGPEALLDEIENLLPEAWREQIRAFPIAALAVGLGVGVWLGMKKSDELIAAGSSMISAAAMANVSSVMDRAKGNG*
Ga0137440_10606571	3300011410	Soil	MAERDPDQHERSAAGLDFDDGTIRDKAGELGAKMLEGPEALLNEIENLLPEAWREQIRAFPVVAVALGLGVGIWLGMKKGDEIIAAGSSLATATAMANISAVMDKVKG*
Ga0137461_10391422	3300012040	Soil	MVTKGADDQERSAAGLDFDDDAPGAAAAGGEKTAGDGPQSLFDELENLLPDAWREHVRTYPVAAVLIGFGVGVFLGMKKSDEIIAAGTALVSSAAMANVSQVMEKMKG*
Ga0137459_11352192	3300012228	Soil	MTQKDPDDYERSAAGLDFDENTIRDQAEGLGAKMQEGPEALLDEIENLLPEAWREQIRAFPVAAVLLGVGVGVWLGMKKSDEIIAAGSSLVSAAAMANVSAVMDKVKG*
Ga0163162_117256473	3300013306	Switchgrass Rhizosphere	MSKGSPDDHERSAAGLDFEDDPLRSGAASLGARFAEGPEAVLDEIENLLPESWREHIRQFPIAAVAVGLGVGLWLGMKKSDEVIAAGTALIGG
Ga0075331_11269381	3300014310	Natural And Restored Wetlands	AAGLDFDDQSTVRDNAAKWGAKMVEDGPEALLDEIENLLPEAWRDQIRAYPVAAVLIGVGVGVWLGMKKSDEIITAGGSLVSAAAMANISQVMDRFKA*
Ga0182000_100223612	3300014487	Soil	MATHTNDEHERSAAGLDFDESGDVREKAAAFGTKIVEEGPDALLDEIENLLPDEWREHIRTFPIAAVALGLGVGLWLGMKKSDEVIAAGSSLVSAAAMANVTQVMDRMKGSS*
Ga0180074_10173581	3300014877	Soil	MAIPRDSDEHERAAAGLDYDEQSSVRDGAAKLGAKMVEEPEALLDEIENLLPEAWRDQIRAFPLAAVAIGLGVGVWLGMKKSDEIIAAGGSLVSAAAMANVSEVMERMKG*
Ga0190266_101943562	3300017965	Soil	MTQRNSDEHERSAAGLDFDPGEIRDKAEALGAKMVQEGPEALLDEIENLLPEAWRDQISAFPMAAVALGVGVGIWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKGG
Ga0190272_1000027929	3300018429	Soil	MATQRSSEQHERSAAGLDFDGDIRGNAAALGQKIVDEGPGAIFDELENLLPEEWQEHIRTFPLAAVALGIGVGVWLGMKKSDEIISAGSALVSSAAMANVAQVMDKVKQG
Ga0190275_1000011785	3300018432	Soil	MTQQRPPDERERSAAGLDFDEGALRDNAAALGAKMVQEGPEALFDEIENLLPEAWREHIRTFPVAAVALGLGVGIWLGMKKSDEVITAGTSLVSAAAMANVSQVMDKMKG
Ga0190269_118995872	3300018465	Soil	MATQRPGDYDRSAAGQDFDDDPIRANAASIGQKMVQDGPDALFQELENLLPEAWQDQIKAFPIAAVALGVGVGVWLGMKKSDELIAAGGALVTSAAMANVSQVMDKIN
Ga0190268_106934691	3300018466	Soil	MATQDTSDHERSAAGLDFDDPDSWRSNAAALGAKVIEEGPDALFDELENLLPESWRDQIQAFPIAAVALGVGIGVWLGMKKSDEIITAGGALVTSAAMANVSQVMDKFK
Ga0190270_104851782	3300018469	Soil	MSKGFPEDHERSAAGLDFEDDPIRTGAASLGAKMVENGPEAVLDEIENLLPESWREHIQTFPIAAVALGVGIGLWLGMKKSEEIIAAGTALVSSAAMANVSQVMDKMKGDA
Ga0190270_112538302	3300018469	Soil	YERSAAGLDFDAGEFRDKAEALGAKMVQEGPEALLDEIENLLPEAWRDQISAFPLAAVALGVGVGGWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKG
Ga0190264_108851581	3300019377	Soil	MAERDPDDYERSAAGLDFDDGAIRDKCGELGAKMMEEGPEALLDEIENLLPEAWREQIRAFPVVAMALGLGVGIWLGMKKGDEIIAAGTSLVTATAMANVSAVMDKVKG
Ga0190264_119272381	3300019377	Soil	MTQRNSDEHERSAAGLDFDASEFRDKAEALGAKMVQEGPEALLDEIENLLPEAWRDQISAFPLAAVALGVGVGVWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKG
Ga0190267_114971321	3300019767	Soil	MATQNSADHERSAAGLDFDDPDSWRSNAAALGAKVIEEGPDALFDELENLLPESWRDQIQAFPIAAVALGVGIGVWLGMKKSDEIITAGGALVTSAAMANVSQVMEKFKG
Ga0196977_100003056	3300020146	Soil	MAQRNPDQHERSAAGLDFDDGAIREKAQALGAKMVQEGPEALLDEIENLLPESWRDQIRTFPVAAVALGLGVGIWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVRGE
Ga0196976_100006016	3300020147	Soil	MATQRSSDHERSAAGLDFDDSDPIRSNAAAIGAKMVQEGPDALFNELENLLPEAWQDQIKAFPIAAVALGVGVGVWLGLKKSDEIITAGTALVSSAAMANVSQVMDKINKG
Ga0196959_100060894	3300021184	Soil	MATQRSSDEHERSAAGLDYDEYSNVRENAAKLGAKMVEDGPDALLNEIENLLPEAWRDQIRAFPIGAVLLGVGIGVWLGMKKSDEIIAAGGSLVSAAAMANVSQVMDRFKQ
Ga0213903_1105932	3300021289	Soil	MAERDPDDYERSAAGLDFDGGTIRDKAEELGAKMLEGPEALLDEIENLLPEAWREQIRAYPVVAMALGLGIGLWLGMKKSDEIIAAGSSLVSAAAMANVSAVMDKVKG
Ga0193706_10430612	3300021339	Soil	MTPRDPDEYERSAAGLDFDDGAMREKAEALGAKMMQEGPEALLDEIENLLPEAWRDQIRAFPVAAMALGVGVGIWLGMKKSEEIIAAGTSLVSAAAMANVAQVMDKVKGEG
Ga0213873_10000001211	3300021358	Rhizosphere	MPNGFPGGDALRDQAAALGQKVVENGPDAIFDEIENLLPEEWREHVRTFPLVAVTLGVGIGLWLGMRKSDEVLAAGTSLISAAAMANVSQVIDKMKGGG
Ga0193698_10267882	3300021968	Soil	MAERDPDQYERSAAGLDFDDATIREKAGELGAKMLEGPEALLDEIENLLPEAWRDQIRAYPLVAMALGVGVGVWLGMTKSDEIIAAGGSLVSAAAMANVSAIVDKVKG
Ga0209640_103744482	3300025324	Soil	MARRSSSSDSPDEHERAAAGLDYDEQSSVRDGAAALGAKMVEDGPDALLDEIENLLPEAWRDQIKAYPIVAVVLGLSVGIWLGMKKSDEIIAAGGSLVSAAAMANVSQVMDKFKS
Ga0207655_10674122	3300025728	Miscanthus Rhizosphere	MARGFPEDHERAAAGLDFEDDPVRNGAASLGAKMAEGPEAFMDEIESLLPESWREHIQQFPIAAVALGLGIGVWLGLKKSDEVIAAGTALISSAAMSNVSQVMDKMKGDA
Ga0207643_100462782	3300025908	Miscanthus Rhizosphere	MARDIPEDHERSAAGMDYEDDPVRNGAASLGAKIAEEGPEAILDEIENLIPENWREQIQAFPFAAIALGVGVGIWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKVRGDA
Ga0207662_100015349	3300025918	Switchgrass Rhizosphere	MAQGYPDQRERSAAGLDFDDPGAIRDKAAAMGARMVEEGPEAVLDEIEQLLPEAWRDQIRSFPLAAVALGIGVGVWLGMKKSEEIITAGGSLVSAAAMANVNQVMDKMKQG
Ga0207701_100975612	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAQGDPDQRERSAAGLDFDDPGGIRDKAAAMGERMVEEGPEVLLDEIENLLPEAWRDQIKSYPLAAVLLGVGVGLWLGMKKSDEIITAGSSLVSAAAMANVNQVMDKMKQG
Ga0207706_105647363	3300025933	Corn Rhizosphere	MATRNSDEYERSAAGLDFDAGGIRDKAEALGAKMVQEGPEALLDEIENLLPEAWRDQIKAFPVLAVALGVGVGVWLGMKKSDEIIAAGTSLVSAAAMANVSQVMEKVKDAIN
Ga0207686_100044377	3300025934	Miscanthus Rhizosphere	MPKDFPEDHERAAAGLEFDEDPLRNGAASLGAKFAEEGPEALLDEIENLLPESWREQIQAFPIVAVALGLGVGVWLGMKKSDEVIAAGTALISSAAMSNISQVMDKVKGGA
Ga0207670_108599232	3300025936	Switchgrass Rhizosphere	MAERDPDQHERSAAGLDFDDGGTIRDKAEELGAKMLEGPEALLDEIENLLPEAWRDQIRAYPVVAMALGLGIGIWLGMKKSDEIIAAGSSLVSAAAMANVSAVIDKVKG
Ga0207669_101226173	3300025937	Miscanthus Rhizosphere	MTKGYSSDEYERSAAGLDYDEGDGMRDNAAKLGAKMVEDGPQALLDEIENLLPEAWREQIQTFPIAAVVLGVGVGLWLGLKKSDEIIAAGGALVTSAAMANVSQVMEKFQKG
Ga0207708_1000000343	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MANGFPEDHERSAAGLDFEDDPIRAGAASLGAKMVENGPEAVLDEIENLLPESWREQIQSFPIAAVALGIGIGVWLGMKKSEEIIAAGTALVSSAAMANVSQVMDKVKGGA
Ga0207648_113945202	3300026089	Miscanthus Rhizosphere	AMAKGFPEDHERAAAGLDFEDDPVRNGAASLGAKMAEGPEAFMDEIESLLPESWREHIQQFPIAAVALGVGVGLWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKMKGDA
Ga0207675_1001050202	3300026118	Switchgrass Rhizosphere	MAKGSPDDHERSAAGLDFEDDPLRNGAASLGARFAEGPEALLDEIENLLPESWREHIRQFPIAAVAIGLGVGLWLGMKKSDEVIAAGTALISSAAMSNVSQVMDKMKGDA
Ga0209468_1000013118	3300026306	Soil	MARESSEDHERAAAGLDFEEDPLRSGAANLGAKIAEEGPEALLDEIEELLPESWREHIEAYPLAAIALGVGVGIWLGMKKSQEIIAAGTALVSSVAMSNVSQVMDKVKGGA
Ga0209347_10059094	3300027640	Deep Subsurface	MSERFPDEHERAAAGLDFDTSALFENAAEWGTRMIENGPEALLDEIEEMLPEAWREQIQTFPIVAVALGFGVGVFLGMKKSHEVIAAGTSLVSAAAMANVNQVMDKVKEGR
Ga0207428_10000008115	3300027907	Populus Rhizosphere	MAERDPDQYERSAAGLDFDDGNLRDKAEELGAKMLEGPEALLDEIENLLPEAWRDQIRTYPVVAMALGLGIGIWLGMKKSDEIIAAGSSLVSAAAMANVSAVMDKVKG
Ga0209382_1000065212	3300027909	Populus Rhizosphere	MTAQRNSSDEHERAAAGLDYDEQSSVHDGAAKLGAKMVEQPEALLDEIENLLPEAWRDQIRAFPLAAIAIGVGVGVFLGMKKSDEIIAAGGSLISAAAMANVSEVMDRMKG
Ga0272482_100982881	3300028578	Soil	MAQPYPGEHERSAAGLDFDESAIRDSAAAWGQRMVQEGPEALFDEIENLLPEQWRDQIKTFPLAAVALGVGVGLWLGMKKSDEVIAAGTSLISAAAMANVSQVVDKVKNG
Ga0268243_10271542	3300030510	Soil	MATHTNDEHERSAAGLDFDESGDVREKAAAFGTKIVEEGPDALLDEIENLLPDEWREHIRTFPIAAVALGLGVGLWLGMKKSDEVIAAGSSLVSAAAMANVTQVMDRMKGSS
Ga0247632_10041493	3300030533	Soil	MATNRSRDEHERSAAGLDYDEHAGLRENAASIGQKMVESPEQILDEIENLLPEEWRDQIRAFPVAAVALGVGIGVWLGMKKSDEIIAAGTSLVSAAAMAN
Ga0308183_10884171	3300030988	Soil	MATQSHEHQRSAAGMDYEDDPIREKAADLGKRVAEQGPEALFDEVENLLPEAWRDHIRQFPVAAVALGVGVGVWLGMKKSDEIIAAGSTLLSTVAMANVSQVMDKVKGGAS
Ga0308197_103080611	3300031093	Soil	MPTRTTDERERSAAGLDYDENGDVREKAAAFGAKIVEEGPEALLDEIENLLPEAWREHIQTFPVAAVALGLGVGIWLGMKKSAEVIAAGSSLVSAAAMANVTQVMDRMK
Ga0308195_10198702	3300031123	Soil	MDAQRSSDSHERSAAGLDYDDGDPIRSNAAALGAKMLEEGPEALFNELENLLPEQWRDQIKAFPLAAVVLGVGVGVWLGMKKSDEIISAGGALVSSAAMANVSQVMDKFKS
Ga0308195_10203071	3300031123	Soil	MAEHDPDQRERSAAGLDFDDGSIRDKAEELGAKMLEGPEALLDEIENLLPEAWREQIRAYPVVAMGLGIGIGIWLGMKKSDEIIAAGSSLVSAAAMANVSAVMDKVKG
Ga0308195_10396692	3300031123	Soil	MTTQHQEHERSAAGMDYEDDPIREKAADLGKRVAENGPEALFDEIENLLPEAWRDHIRQFPVAAVAVGVGVGVWLGMKKSDEIIAAGSTLLSTVAMANVSQVMDK
Ga0307502_100616382	3300031164	Soil	TTMATQRSSEGHERSAAGLDFDGDIRGNAAALGAKLIDEGPGALFDELENLLPQEWQDHIKTFPLAAVALGVGVGVWLGMKKSDEILAAGGALVSSAAMANVAQVMDKVKQG
Ga0307505_100012299	3300031455	Soil	MVTTGTADEHERSAAGLDLDEDEGTRGNAAAWGERMAEDGPQALFDEVENLLPEAWREQIRAFPVAAVVLGFGVGVFLGMKKSDEIIAAGTALVSSAAMANVSQVMEKMKG
Ga0314816_10216182	3300031481	Soil	MATRSTDDHERSAAGLDFDEGAIRDNAAALGAKMVEEGPEALFDELENLLPEAWRDQIRAFPVAAVALGLGVGIWLGLKKSDEVIAAGSSLVSAAAMANVSQVMDKFKG
Ga0314816_10396971	3300031481	Soil	MTQRNSDEYERSAAGLDFDASEFRDKAEALGAKMVQEGPEALLDEIENLLPEAWREQISAFPLAAVALGVGVGVWLGMKKSDEIIAAGTSLVSAAAMANVSQVMDKVKG
Ga0307468_1002311822	3300031740	Hardwood Forest Soil	MAERDPDDYERSAAGLDFDDGTIRDKAGELGAKMLEGPEALLDEIENLLPEAWREQIRAYPVVAMALGLGIGLWLGMKKSDEIIAAGSSLVSAAAMANVSAVMDKVKG
Ga0307468_1014577121	3300031740	Hardwood Forest Soil	MVRDFPEDHERSAAGMDYEDDPLRNGAANLGAKIAEEGPEALLDEIENLLPESVREHVQAFPLAAVALGVGVGIWLGMKKSEEIIAAGTAL
Ga0307416_1024606892	3300032002	Rhizosphere	MTQRNSDEHERSAAGLDFDGAEFRDKAEALGVKMVQEGPEALFDEIEELLPESWRDQIRAFPVTAMALGLGVGIWLGMKKSDEIIAAGSSL
Ga0307416_1033273201	3300032002	Rhizosphere	MAKQQTDPHERAAAGLDFDESSLRDKSAQLGAKMFEEGPGVLLDEIENLLPEEWREHIRSFPLAAVTLGLGVGIWLGMKKSEEIIAAGTSLVSAAAMANVAQVMDKVKGEG
Ga0307411_116486612	3300032005	Rhizosphere	MATQRFNDEHERSAAGLDYDEHSTVRENAAKLGAKMVEDGPEALLDEVENLLPEAWRDQIRAFPVAAVLVGVGVGVWLGMKKSDEIIAAGGSLVSAAAMANVSQVMDRFKQ
Ga0334942_001046_7546_7878	3300034008	Biocrust	MATQRSPEEHERSAAGLDFDGDIRGNAAALGQKIVDEGPEALFDQLENLLPEEWQDHIRTFPIAAVVLGVGVGVWLGMKKSDEVISAGGALISSAAMANVAQVMDKVKQG
Ga0334940_122176_342_677	3300034025	Biocrust	MATTQRTGDHERSAAGQDFDDDPIRANAASIGQKMVQDGPDALFQELENLLPEAWQDQIKSFPIAAVALGVGVGVWLGMKKSDEIITAGTALVSSAAMANVSQVMDKINKG
Ga0334964_000224_16102_16389	3300034146	Sub-Biocrust Soil	MDFEDDPIRERAAALGQRMVENGPEALFDEIEGLLPDSWRDHIRTFPIAAVALGVGAGIWLGMKKSDEIIAAGTTLVSTAAMANVAQVMDKVKGQ
Ga0334964_007447_1402_1740	3300034146	Sub-Biocrust Soil	MATQQSSDRHERSAAGQDFDDGDPIRANAASLGAKMVEEGPDVLFNELENLLPDAWRDQIKSFPIAAVALGVGVGVWLGMKKSDEVIAAGGALVSSAAMANVSQVMDKINKG
Ga0364925_0115989_451_786	3300034147	Sediment	MASQGFSEHERSAAGLDYDESSNVKENAAKLGAKMIEGPEALLDEIENLLPEAWREQIRAFPIAAVLIGAGVGLWLGMKKSDEIIAAGGSLVSAAAMANVSQVMDRIKPQD
Ga0334925_000087_630_932	3300034173	Hypolithic Biocrust	MATGNRQGSADPIRENAAALGAKMAEHGPEALFDELENFLPEEWREHIRTFPLAAVALGIGVGVWLGMRKSEDVIAAGTSLVSAAAMANVSQVMDKVRGA
Ga0370499_0129371_306_632	3300034194	Untreated Peat Soil	MAERDPDQHERSAAGLDFEDGGIREKAGELGAKMLEGPEALLDEIENLLPEAWREQIRAFPVVAVTLGLGVGVWLGMKKGDEILAAGTSLVTASAMANISAVMDKVKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068101

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences