Metagenome Family F068085

Basic Information
Family ID	F068085
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	58 residues
Representative Sequence	MIVWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Number of Associated Samples	115
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.77 %
% of genes near scaffold ends (potentially truncated)	65.60 %
% of genes from short scaffolds (< 2000 bps)	82.40 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (54.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.600 % of family members)
Environment Ontology (ENVO)	Unclassified (38.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.200 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.68% β-sheet: 0.00% Coil/Unstructured: 44.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13581	HATPase_c_2	8.80
PF02518	HATPase_c	4.80
PF07568	HisKA_2	4.00
PF13472	Lipase_GDSL_2	3.20
PF13545	HTH_Crp_2	3.20
PF02566	OsmC	3.20
PF05981	CreA	2.40
PF01152	Bac_globin	2.40
PF00027	cNMP_binding	1.60
PF08448	PAS_4	1.60
PF00072	Response_reg	1.60
PF12244	DUF3606	0.80
PF07883	Cupin_2	0.80
PF13531	SBP_bac_11	0.80
PF09939	DUF2171	0.80
PF13936	HTH_38	0.80
PF00296	Bac_luciferase	0.80
PF06823	DUF1236	0.80
PF13396	PLDc_N	0.80
PF04226	Transgly_assoc	0.80
PF03734	YkuD	0.80
PF00140	Sigma70_r1_2	0.80
PF07369	DUF1488	0.80
PF05378	Hydant_A_N	0.80
PF13458	Peripla_BP_6	0.80
PF04392	ABC_sub_bind	0.80
PF03401	TctC	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	4.00
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	3.20
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	3.20
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	2.40
COG3045	Periplasmic catabolite regulation protein CreA (function unknown)	Signal transduction mechanisms [T]	2.40
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.60
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.80
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.80
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.80
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.80
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.80
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.40 %
Unclassified	root	N/A	45.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.40 %
Unclassified	root	N/A	45.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.40 %
Unclassified	root	N/A	45.60 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.00 %
Unclassified	root	N/A	45.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	33.60 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.40 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.40 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.60 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.40 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.80 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.80 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.60 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.80 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	3.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.40 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Mesorhizobium sangaii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.60 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.80 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	3.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.40 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Mesorhizobium sangaii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02JW7P9	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
2228664022\|INPgaii200_c0964052	Not Available	641	Open in IMG/M
3300000559\|F14TC_100781478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300000787\|JGI11643J11755_11807868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	601	Open in IMG/M
3300000891\|JGI10214J12806_11155804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1792	Open in IMG/M
3300001979\|JGI24740J21852_10037388	Not Available	1499	Open in IMG/M
3300002128\|JGI24036J26619_10015087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1408	Open in IMG/M
3300004114\|Ga0062593_100003249	All Organisms → cellular organisms → Bacteria → Proteobacteria	6207	Open in IMG/M
3300004156\|Ga0062589_100003518	All Organisms → cellular organisms → Bacteria → Proteobacteria	5269	Open in IMG/M
3300004479\|Ga0062595_101107285	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300004479\|Ga0062595_102351503	Not Available	527	Open in IMG/M
3300005093\|Ga0062594_100000551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7151	Open in IMG/M
3300005147\|Ga0066821_1014660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	608	Open in IMG/M
3300005169\|Ga0066810_10032794	Not Available	937	Open in IMG/M
3300005289\|Ga0065704_10408768	Not Available	744	Open in IMG/M
3300005328\|Ga0070676_10660962	Not Available	759	Open in IMG/M
3300005330\|Ga0070690_100806091	Not Available	728	Open in IMG/M
3300005335\|Ga0070666_11348131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	533	Open in IMG/M
3300005343\|Ga0070687_100468515	Not Available	841	Open in IMG/M
3300005353\|Ga0070669_100703136	Not Available	854	Open in IMG/M
3300005354\|Ga0070675_100211066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1687	Open in IMG/M
3300005366\|Ga0070659_100789036	Not Available	825	Open in IMG/M
3300005456\|Ga0070678_100447036	Not Available	1131	Open in IMG/M
3300005468\|Ga0070707_101557681	Not Available	628	Open in IMG/M
3300005518\|Ga0070699_101506867	Not Available	617	Open in IMG/M
3300005536\|Ga0070697_101319937	Not Available	644	Open in IMG/M
3300005536\|Ga0070697_101548143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	593	Open in IMG/M
3300005543\|Ga0070672_100517431	Not Available	1033	Open in IMG/M
3300005544\|Ga0070686_100612021	Not Available	859	Open in IMG/M
3300005546\|Ga0070696_100524496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	945	Open in IMG/M
3300005546\|Ga0070696_100528027	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005563\|Ga0068855_101390684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	724	Open in IMG/M
3300005563\|Ga0068855_101654137	Not Available	654	Open in IMG/M
3300005615\|Ga0070702_100563744	Not Available	848	Open in IMG/M
3300005842\|Ga0068858_100025134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5542	Open in IMG/M
3300006172\|Ga0075018_10542313	Not Available	611	Open in IMG/M
3300006237\|Ga0097621_100560828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300006354\|Ga0075021_10005913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6457	Open in IMG/M
3300006881\|Ga0068865_100429530	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300006903\|Ga0075426_10468938	Not Available	933	Open in IMG/M
3300009176\|Ga0105242_10357111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1351	Open in IMG/M
3300009545\|Ga0105237_12356590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	542	Open in IMG/M
3300010373\|Ga0134128_12109696	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300010375\|Ga0105239_11005255	Not Available	959	Open in IMG/M
3300010401\|Ga0134121_12213293	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300012496\|Ga0157353_1001645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1314	Open in IMG/M
3300012884\|Ga0157300_1004489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1486	Open in IMG/M
3300012891\|Ga0157305_10138881	Not Available	642	Open in IMG/M
3300012901\|Ga0157288_10006580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1758	Open in IMG/M
3300012904\|Ga0157282_10019775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1372	Open in IMG/M
3300012908\|Ga0157286_10348923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	558	Open in IMG/M
3300012913\|Ga0157298_10162087	Not Available	681	Open in IMG/M
3300012941\|Ga0162652_100077192	Not Available	575	Open in IMG/M
3300012958\|Ga0164299_10271028	Not Available	1026	Open in IMG/M
3300012960\|Ga0164301_10132531	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300012961\|Ga0164302_10370335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	965	Open in IMG/M
3300012984\|Ga0164309_11051162	Not Available	674	Open in IMG/M
3300012986\|Ga0164304_11510850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	556	Open in IMG/M
3300012987\|Ga0164307_11373944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	593	Open in IMG/M
3300013105\|Ga0157369_10316232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1623	Open in IMG/M
3300013297\|Ga0157378_10838245	Not Available	947	Open in IMG/M
3300013306\|Ga0163162_10923012	Not Available	985	Open in IMG/M
3300013307\|Ga0157372_10963234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300014968\|Ga0157379_11094038	Not Available	763	Open in IMG/M
3300015371\|Ga0132258_10285601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4051	Open in IMG/M
3300015371\|Ga0132258_10585480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2800	Open in IMG/M
3300015373\|Ga0132257_103140827	Not Available	602	Open in IMG/M
3300015374\|Ga0132255_100300488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2310	Open in IMG/M
3300018067\|Ga0184611_1078492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1130	Open in IMG/M
3300018073\|Ga0184624_10455298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	561	Open in IMG/M
3300019356\|Ga0173481_10004883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3548	Open in IMG/M
3300019356\|Ga0173481_10124814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1027	Open in IMG/M
3300020002\|Ga0193730_1093101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	844	Open in IMG/M
3300022892\|Ga0247753_1012991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300025711\|Ga0207696_1184856	Not Available	550	Open in IMG/M
3300025907\|Ga0207645_10027668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3660	Open in IMG/M
3300025907\|Ga0207645_10122500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1689	Open in IMG/M
3300025911\|Ga0207654_10414347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	939	Open in IMG/M
3300025917\|Ga0207660_10296913	Not Available	1286	Open in IMG/M
3300025926\|Ga0207659_10479924	Not Available	1050	Open in IMG/M
3300025930\|Ga0207701_10042609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	4212	Open in IMG/M
3300025936\|Ga0207670_11805303	Not Available	520	Open in IMG/M
3300025937\|Ga0207669_10174554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1534	Open in IMG/M
3300025972\|Ga0207668_10118855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1998	Open in IMG/M
3300026035\|Ga0207703_12149646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	534	Open in IMG/M
3300026067\|Ga0207678_10692549	Not Available	897	Open in IMG/M
3300026075\|Ga0207708_10038394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3647	Open in IMG/M
3300026089\|Ga0207648_10622276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	996	Open in IMG/M
3300026095\|Ga0207676_11126611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	776	Open in IMG/M
3300026118\|Ga0207675_100616154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300026142\|Ga0207698_10882840	Not Available	901	Open in IMG/M
3300026719\|Ga0207438_100257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300026720\|Ga0207440_101874	Not Available	602	Open in IMG/M
3300026769\|Ga0207492_100196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1367	Open in IMG/M
3300026779\|Ga0207471_104252	Not Available	528	Open in IMG/M
3300026822\|Ga0207498_100121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3451	Open in IMG/M
3300026900\|Ga0207444_1001041	Not Available	2022	Open in IMG/M
3300026939\|Ga0207542_102634	Not Available	608	Open in IMG/M
3300026944\|Ga0207570_1007759	Not Available	750	Open in IMG/M
3300027036\|Ga0207467_1004335	Not Available	992	Open in IMG/M
3300027407\|Ga0207520_101003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	730	Open in IMG/M
3300027425\|Ga0207522_100518	Not Available	976	Open in IMG/M
3300027617\|Ga0210002_1064750	Not Available	640	Open in IMG/M
3300027665\|Ga0209983_1003749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3220	Open in IMG/M
3300027894\|Ga0209068_10032817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2579	Open in IMG/M
3300027910\|Ga0209583_10565684	Not Available	573	Open in IMG/M
3300028720\|Ga0307317_10200555	Not Available	673	Open in IMG/M
3300028755\|Ga0307316_10077508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1142	Open in IMG/M
3300028807\|Ga0307305_10572666	Not Available	503	Open in IMG/M
3300028811\|Ga0307292_10247556	Not Available	740	Open in IMG/M
3300028814\|Ga0307302_10360143	Not Available	718	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10004678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3570	Open in IMG/M
3300031226\|Ga0307497_10108689	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031226\|Ga0307497_10196378	Not Available	871	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1004459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3327	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1127360	Not Available	628	Open in IMG/M
3300031854\|Ga0310904_10018763	All Organisms → cellular organisms → Bacteria → Proteobacteria	2996	Open in IMG/M
3300031940\|Ga0310901_10000853	All Organisms → cellular organisms → Bacteria	6067	Open in IMG/M
3300031944\|Ga0310884_10863429	Not Available	556	Open in IMG/M
3300032205\|Ga0307472_101110727	Not Available	749	Open in IMG/M
3300032782\|Ga0335082_10491129	Not Available	1090	Open in IMG/M
3300032892\|Ga0335081_10700216	Not Available	1229	Open in IMG/M
3300033433\|Ga0326726_10097569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2625	Open in IMG/M
3300034090\|Ga0326723_0591436	Not Available	513	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.60%
Host-Associated	Host-Associated	34.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.80%
Plants	Host-Associated → Plants	34.40%
Aquatic	Environmental → Aquatic	4.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.00%
Sediment	Environmental → Aquatic → Sediment	4.80%
Peat	Environmental → Terrestrial → Peat	1.60%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.20%
Loam	Environmental → Terrestrial → Soil → Loam	11.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.80%
Sand	Environmental → Terrestrial → Soil → Sand	2.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.40%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	12.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.20%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.40%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.60%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.60%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.60%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026719	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A3-11 (SPAdes)	Environmental	Open in IMG/M
3300026720	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2w-12 (SPAdes)	Environmental	Open in IMG/M
3300026769	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-11 (SPAdes)	Environmental	Open in IMG/M
3300026779	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2w-11 (SPAdes)	Environmental	Open in IMG/M
3300026822	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026900	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K4-12 (SPAdes)	Environmental	Open in IMG/M
3300026939	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-12 (SPAdes)	Environmental	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027036	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027407	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-12 (SPAdes)	Environmental	Open in IMG/M
3300027425	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00948190	2170459010	Grass Soil	SALEAAMIVWKYIILFTCLGVGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALARWRHQ
INPgaii200_09640521	2228664022	Soil	MIVWKYVLLFTCLGIGAALCVGAISILRGPPDNGPPAWFAAVLGAMFFWGAFA
F14TC_1007814783	3300000559	Soil	MIVWKYVLLFTCLGIGAALCVGAISILRGPPDNGPPAWFAAVLGAMFFWGAFALARWRHH
JGI11643J11755_118078682	3300000787	Soil	MIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAVLGAMFF
JGI10214J12806_111558041	3300000891	Soil	AMANWSVLEAAMIIWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVFGAMFFWGAFALARWRLQ*
JGI24740J21852_100373883	3300001979	Corn Rhizosphere	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGA
JGI24036J26619_100150871	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MIALKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALA
Ga0062593_10000324912	3300004114	Soil	MIIWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVFGAMFFWG
Ga0062589_1000035181	3300004156	Soil	MIIWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVFGAMFFWGA
Ga0062595_1011072852	3300004479	Soil	AAMIVLKYILLFTCLVIGVALCVGAISIFRSPPDNGPPAWFAAVFSALFFWGAFALARWRHQ*
Ga0062595_1023515031	3300004479	Soil	VNSALEAAMIVWKYILLFTCLGVGVALCVGAISILRGPLDHGPPAWFAAVLGAMFFWGAFALTRWRHQ*
Ga0062594_1000005517	3300005093	Soil	MIVLKYILLFTCLGIGVALCVGAVSILRSPPDHGPPAWFAAVFGAMFFWGTFALARWRLQ
Ga0066821_10146602	3300005147	Soil	MIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAAFGAMFLWG
Ga0066810_100327942	3300005169	Soil	MIVWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFALARWR
Ga0065704_104087681	3300005289	Switchgrass Rhizosphere	MIVWKYVLLFTCLGIGAALCVGAISILRGPPDNGPPAWFAAVLGAMFFWGAFALARWKHQ
Ga0070676_106609621	3300005328	Miscanthus Rhizosphere	MIALKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWR
Ga0070690_1008060911	3300005330	Switchgrass Rhizosphere	MIALKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0070666_113481312	3300005335	Switchgrass Rhizosphere	MILWKYILLFTCLGIGVALCVGAISILGSPPGNGPPAWFAAVFGAMFFWGAFALARWR
Ga0070687_1004685151	3300005343	Switchgrass Rhizosphere	MIALKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFW
Ga0070669_1007031363	3300005353	Switchgrass Rhizosphere	GSMIVGKYILLCTCLGIGVALCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ*
Ga0070675_1002110664	3300005354	Miscanthus Rhizosphere	LCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ*
Ga0070659_1007890361	3300005366	Corn Rhizosphere	GRVNSALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAAFGAMFLWGAFALARWRHQ*
Ga0070678_1004470363	3300005456	Miscanthus Rhizosphere	VNSALEAVMIALKYILLFTCLGIGLALCVGAISILRSATDSGPPPWFAAAFGAMFFWGAFALARWRLQ*
Ga0070707_1015576811	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWR
Ga0070699_1015068672	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFAL
Ga0070697_1013199372	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VNSALEAAMIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAF
Ga0070697_1015481432	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MIVGKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFELARWRLQ
Ga0070672_1005174313	3300005543	Miscanthus Rhizosphere	MIALKYILLFTCLGIGLALCVGAISILRSATDSGPPPWFAAAFGAMFFWGAFALARWRLQ
Ga0070686_1006120212	3300005544	Switchgrass Rhizosphere	MIALKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAF
Ga0070696_1005244961	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VNSALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFELARWRLQ*
Ga0070696_1005280271	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VWKYILLFTCLGIGVALCVGAISILKSPPDHGPPAWFAAVLGAMFFWGAFALARWRHQ*
Ga0068855_1013906841	3300005563	Corn Rhizosphere	MIVWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAF
Ga0068855_1016541371	3300005563	Corn Rhizosphere	MIVGKYILLFTCLGIGVALCVGAISILRSPLDSGPPAWFAAVFGAMFFWGAFALSRWRHQ
Ga0070702_1005637442	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MILWRYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAAFGAMFLWGAFALARWR
Ga0068858_1000251342	3300005842	Switchgrass Rhizosphere	MILWKYILLFTCLGIGVALCVGAISILGSPPDNGPPAWFAAVFGAMFFWGAFALARWRLQ
Ga0075018_105423132	3300006172	Watersheds	IGVALCVGAISILRSPPDNGPPAWFAAVLGAMFLWGAFALSRWRHE*
Ga0097621_1005608282	3300006237	Miscanthus Rhizosphere	MIVWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWG
Ga0075021_100059131	3300006354	Watersheds	AVFFGGSMIVGKYILLFICLGIGVALCVGAISILRSPLDDGPPAWFAAMLGVVFFWGAFALSRWRHQ*
Ga0068865_1004295302	3300006881	Miscanthus Rhizosphere	MTVGKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFELARWRLQ
Ga0075426_104689382	3300006903	Populus Rhizosphere	MVWKYILLFTCLGIGVALCVGAISILRSPPESGPPAWFAAVLGAMFFWGAFALARWR
Ga0105242_103571111	3300009176	Miscanthus Rhizosphere	MILWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAF
Ga0105237_123565901	3300009545	Corn Rhizosphere	MIVGKYILLFTCLGIGVALCVGAVSILRSPPDHGPPAWFAAVFGAMFLWVTFALAR
Ga0134128_121096961	3300010373	Terrestrial Soil	IVLVYFGGSMIVGKYILLFTCLGIGVALFVGAISILSSPPDNGPPAWFAAVFGAMFFWGAFALSRWRHQ*
Ga0105239_110052552	3300010375	Corn Rhizosphere	ILLFTCLGIGVALCVGAVSILRSPPDHGPPAWFAAVFGAMFFWGTFALARWRLQ*
Ga0134121_122132932	3300010401	Terrestrial Soil	FIPKATDTALEVAMIVWKYILLFTCLGIGVALCVGAISILRSTLDSGPPAWFAAVFSAMFFWGAFALARWRPQ*
Ga0157353_10016452	3300012496	Unplanted Soil	MIVWKYILLFTCLGIGVALCVGAISILGSPPDNGPPAWFAAVFGAMFFWGAFELARWRLQ
Ga0157300_10044891	3300012884	Soil	MIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAVLGAMFFWGAFALARWR
Ga0157305_101388811	3300012891	Soil	LGIGVALCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ*
Ga0157288_100065801	3300012901	Soil	TCLGIGVALCAGPISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ*
Ga0157282_100197751	3300012904	Soil	GGSMIVGKYILLCTCLGIGVALCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ*
Ga0157286_103489231	3300012908	Soil	VNSALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAAFGAMFLWGAFAL
Ga0157298_101620872	3300012913	Soil	MIVWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFAL
Ga0162652_1000771922	3300012941	Soil	LLARTQIVDRYLARIATVNWSALEAAMIVWKYILLFICLGIGVALCIGAISILRSPPDNGPPAWFAAVLVAMFFWGAFALARWRHQQHL*
Ga0164299_102710283	3300012958	Soil	VGKYILLCTCLGIGVALCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ*
Ga0164301_101325314	3300012960	Soil	MIVGRYILLFACLGIGVALCVGAISIWRGPPDTGPPAWFAAGLGAMFFWGAFALSRWRHR
Ga0164302_103703352	3300012961	Soil	MIVGKYILLFTCLGIGVALCVGAISIWRGPPDTGPPAWFAAGLGAMFFWGAFALTRWRHR
Ga0164309_110511622	3300012984	Soil	MIVGKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAAFGAMFLWG
Ga0164304_115108501	3300012986	Soil	MIVGKYILLFTCLGIGVALFVGAISILSSPPDNGPPAWFAAVFGAMFFWGAFALSRWMHQ
Ga0164307_113739441	3300012987	Soil	MILWKYILLFTCLGIGMALCVGAISILGSPPDNGPPAWFAAVFGAMFFWGGFCA
Ga0157369_103162322	3300013105	Corn Rhizosphere	MIVWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0157378_108382452	3300013297	Miscanthus Rhizosphere	MIVGKYILLFTCLGIGVALCVGVISILSSPPDNGPPAWFAAVFGAMFFWGAFALSRWRHQ
Ga0163162_109230121	3300013306	Switchgrass Rhizosphere	MIVGKYILLFTCLGIGVALCVGAISILSSPPDNGPPAWFAAVFGAMFFWGAFALARWRHQ
Ga0157372_109632341	3300013307	Corn Rhizosphere	MIVGKYILLFTCLGIGVALCVGAISILGSPPGNGPPAWFAAVFGAMFFWGAF
Ga0157379_110940382	3300014968	Switchgrass Rhizosphere	IGVALCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ*
Ga0132258_102856013	3300015371	Arabidopsis Rhizosphere	MIVLKYILLFTCLGIGVALCVGAVSILRSPLEHGPPAWFAAVFGAMFFWGTFALARWRLQ
Ga0132258_105854807	3300015371	Arabidopsis Rhizosphere	GQVNSALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPPDSGPPAWFAAAFGAMFLWGAFALARWRLQ*
Ga0132257_1031408271	3300015373	Arabidopsis Rhizosphere	MILWKYILLFTCLGIGVALCVGAISILGSPPGNGPPGWFAAVFGAMFFWGAFALARWRLQ
Ga0132257_1033154141	3300015373	Arabidopsis Rhizosphere	VEAERKISTATVNWSALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALARWRRQ*
Ga0132255_1003004882	3300015374	Arabidopsis Rhizosphere	MIVSKYILLFICLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAIFLWGAFALARWRLQ
Ga0184611_10784922	3300018067	Groundwater Sediment	LFTCLGVGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALAR
Ga0184624_104552982	3300018073	Groundwater Sediment	ARIATVNWSALEAAMIVWKYIILFTCLGVGVALCVGAISILRSPPDNGPPAWFAAVLGGMFFWGAFALARWRHQ
Ga0173481_100048835	3300019356	Soil	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0173481_101248142	3300019356	Soil	MIVWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFELARWRLQ
Ga0193730_10931011	3300020002	Soil	LARIATVNWSALEAAMIVWKYIILFTCLGVGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALARWRHQ
Ga0247753_10129911	3300022892	Soil	SALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFELARWRLQ
Ga0207696_11848562	3300025711	Switchgrass Rhizosphere	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFW
Ga0207645_100276681	3300025907	Miscanthus Rhizosphere	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALAR
Ga0207645_101225001	3300025907	Miscanthus Rhizosphere	MIALKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALAR
Ga0207654_104143472	3300025911	Corn Rhizosphere	MIVGKYILLFTCLGIGVALCVGAISILSSPPDNGPPAWFAAVFGAMFFWGAFALSRWR
Ga0207660_102969131	3300025917	Corn Rhizosphere	MIVGKYILLCTCLGIGVALFVGAISILSSPPDNGPPAWFAAVFGALFFW
Ga0207659_104799241	3300025926	Miscanthus Rhizosphere	LLCTCLGIGVALCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ
Ga0207701_100426092	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIVGKYILLFTCLGIGVALCAGAISIWRSPPDHGPPAWFAAVFGAMFLWGAFALTRWRHQ
Ga0207670_118053031	3300025936	Switchgrass Rhizosphere	MTVGKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAALGAMFFWGAFGLSRWRHP
Ga0207669_101745541	3300025937	Miscanthus Rhizosphere	MIVLKYILLFTCLGIGVALCVGAVSILRSPPDHGPPAWFAAVFGAMFFWGAFALARWRLQ
Ga0207668_101188554	3300025972	Switchgrass Rhizosphere	MIVGKYILLCTCLGIGVALCAGAISILSSPTDNGPPAWFAVVFGALFFWGAFALSRWKHQ
Ga0207703_121496462	3300026035	Switchgrass Rhizosphere	MILWKYILLFTCLGIGVALCVGAISILGSPPGNGPPAWFAAVFGAMFFWGA
Ga0207678_106925492	3300026067	Corn Rhizosphere	MIVGKYILLFTCLGIGVALCVGAISIWRGPPDTGPPAWFAAGLGAMFFWGAFALLRWRHR
Ga0207708_100383941	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MILWKYILLFTCLGIGVALCVGAISILGSPPGNGPPAWFAAVFGAMFFWGAFALARWRLQ
Ga0207648_106222761	3300026089	Miscanthus Rhizosphere	MIVLKYILLFTCLGIGVALCVGAVSILRSPPDHGPPAWFAAVFGAMFFW
Ga0207676_111266111	3300026095	Switchgrass Rhizosphere	MILWKYILLFTCLGIGVALCVGAISILGSPPGNGPPAWFAAVFGAMFFWGAFAL
Ga0207675_1006161542	3300026118	Switchgrass Rhizosphere	MTVGKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAALGAMFFWG
Ga0207698_108828401	3300026142	Corn Rhizosphere	MIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAAFGAMFLWGAFALAR
Ga0207438_1002571	3300026719	Soil	IGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0207440_1018742	3300026720	Soil	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALARW
Ga0207492_1001961	3300026769	Soil	FTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0207471_1042522	3300026779	Soil	MIALKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRL
Ga0207498_1001214	3300026822	Soil	MIVWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0207444_10010412	3300026900	Soil	MIVLKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0207542_1026342	3300026939	Soil	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWG
Ga0207570_10077591	3300026944	Soil	FRGQVNSALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAVLGAMFFWGAFALARWRHQ
Ga0207467_10043352	3300027036	Soil	MIVLKYILLFTCLGIGLALCVGAISILRSPLDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0207520_1010033	3300027407	Soil	LFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0207522_1005182	3300027425	Soil	MIVLKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALA
Ga0210002_10647501	3300027617	Arabidopsis Thaliana Rhizosphere	MIVWKYILLFTCLGIGVALCVGAITILRSPPDHGPPAWFAAALGAMFFWGAFALARWRHQ
Ga0209983_10037494	3300027665	Arabidopsis Thaliana Rhizosphere	MIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAVLGAMFFWGAFALARWRLQ
Ga0209068_100328172	3300027894	Watersheds	MIVWKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVLGAMFLWGAFALSRWRHE
Ga0209583_105656841	3300027910	Watersheds	MIVGKYILLFICLGIGVALCVGAISILRSPLDDGPPAWFAAMLGVVFFWGAFALSRWRHQ
Ga0307317_102005552	3300028720	Soil	MIVWKYIILFTCLGVGVALCVGAISILRSPPDNGPPAWFAAVLGGMFFWG
Ga0307316_100775081	3300028755	Soil	QDLARIATVNWSALEAAMIVWKYIILFTCLGVGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALARWRHQ
Ga0307305_105726662	3300028807	Soil	MKVWKYTFLFICLGIGVALCVGAISILRHHPDEGPPAWFAAALGAIFFWGAFALSRWKAD
Ga0307292_102475561	3300028811	Soil	MIVWKYIILFTCLGVGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALAR
Ga0307302_103601431	3300028814	Soil	MEAAVKVWKYTFLFICLGIGVALCVGAISILRHHPDDGPPAAFAAALGAIFFWGAFALSRWKAD
(restricted) Ga0255310_100046785	3300031197	Sandy Soil	MIVWKYILLFTCLGIGVALCVGAISIFRSPPDHGPPAWFAAVLGAMFFWGAFALARWRPQ
Ga0307497_101086892	3300031226	Soil	MIVGKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALSRWRHRPAFAR
Ga0307497_101963782	3300031226	Soil	MIVGKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVLGAMFFWGAFALS
(restricted) Ga0255312_10044591	3300031248	Sandy Soil	VWKYILLFTCLGIGVALCVGAISILRSPPEHGPPAWFAAALGAMFFWGAFALARWRHQ
(restricted) Ga0255312_11273601	3300031248	Sandy Soil	VNSALEVAMIVWKYILLFTCLGIGVALCVGTISILRSPPDHGPPAWFAAVLGAMFFWGAFAL
Ga0310904_100187632	3300031854	Soil	MIALKYILLFTCLGIGLALCVGVISILRSPPDNGPPAWFAAAFGAMFFWGAFALARWRLQ
Ga0310901_100008532	3300031940	Soil	MIVGKYILLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAALGAMFFWGAFGLSRWRHP
Ga0310884_108634292	3300031944	Soil	MIALKYILLFTCLGIGLALCVGAISILRSPPDNGPPAWFAAAFGAMFFWGAFA
Ga0307472_1011107271	3300032205	Hardwood Forest Soil	RQVNSALEAAMIVWKYILLFTCLGIGVALCVGAISILRSPPDHGPPAWFAAVFGVMFLWGAFALARWRLQ
Ga0335082_104911291	3300032782	Soil	MRVWKYILLFTCLGIGVALCVGALSILRSPPDNGPPAWFAAVLGAMFFWA
Ga0335081_107002163	3300032892	Soil	PARISTVEAAMRVWKYILLFTCLGIGVALCVGAISILRSPSDNGPPAWFAAVLGAMFFWGAFALARWRHH
Ga0326726_100975695	3300033433	Peat Soil	MIVWKYIFLFTCLGIGVALCVGAISILRSPPDNGPPAWFAAVLGAIFFWGAFALARWRHQ
Ga0326723_0591436_3_197	3300034090	Peat Soil	LEAAMIVWKYILLFTCLGIGVALCVGAISILRSPPDNGPPALFAAVLGAMFFWGAFALARWRHQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters