NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F066126

Metagenome Family F066126

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F066126
Family Type Metagenome
Number of Sequences 127
Average Sequence Length 41 residues
Representative Sequence NKVNFGGKNNVGSAIKNTATIPVYKKRLNNNDLKSSI
Number of Associated Samples 88
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.21 %
% of genes from short scaffolds (< 2000 bps) 89.76 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (77.953 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(29.134 % of family members)
Environment Ontology (ENVO) Unclassified
(91.339 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(72.441 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.92%    β-sheet: 0.00%    Coil/Unstructured: 83.08%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF02784Orn_Arg_deC_N 46.46
PF00278Orn_DAP_Arg_deC 44.09
PF14698ASL_C2 6.30
PF01553Acyltransferase 0.79
PF00206Lyase_1 0.79
PF01645Glu_synthase 0.79
PF00578AhpC-TSA 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0019Diaminopimelate decarboxylaseAmino acid transport and metabolism [E] 90.55
COG1166Arginine decarboxylase (spermidine biosynthesis)Amino acid transport and metabolism [E] 90.55
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 0.79
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 0.79


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A77.95 %
All OrganismsrootAll Organisms22.05 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000965|JGI12120J13076_100152Not Available3036Open in IMG/M
3300001585|JGI11880J15749_1000920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3179Open in IMG/M
3300005398|Ga0066858_10161087Not Available648Open in IMG/M
3300005400|Ga0066867_10212353Not Available706Open in IMG/M
3300005402|Ga0066855_10067622Not Available1099Open in IMG/M
3300005408|Ga0066848_10063710Not Available1011Open in IMG/M
3300005408|Ga0066848_10078420Not Available903Open in IMG/M
3300005431|Ga0066854_10146375Not Available793Open in IMG/M
3300005567|Ga0066844_10088074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium532Open in IMG/M
3300005593|Ga0066837_10335068Not Available529Open in IMG/M
3300005595|Ga0066833_10065173Not Available1012Open in IMG/M
3300005953|Ga0066383_10020101Not Available2235Open in IMG/M
3300005953|Ga0066383_10105514Not Available848Open in IMG/M
3300006012|Ga0066374_10058870Not Available1084Open in IMG/M
3300006013|Ga0066382_10208285Not Available675Open in IMG/M
3300006013|Ga0066382_10229189Not Available640Open in IMG/M
3300006093|Ga0082019_1075803Not Available583Open in IMG/M
3300006166|Ga0066836_10160721Not Available1324Open in IMG/M
3300006166|Ga0066836_10197043Not Available1195Open in IMG/M
3300006306|Ga0068469_1493302Not Available607Open in IMG/M
3300006308|Ga0068470_1498536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales545Open in IMG/M
3300006309|Ga0068479_1204274Not Available586Open in IMG/M
3300006323|Ga0068497_1368537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium525Open in IMG/M
3300006326|Ga0068477_1204277Not Available590Open in IMG/M
3300006326|Ga0068477_1210283Not Available891Open in IMG/M
3300006331|Ga0068488_1258193Not Available710Open in IMG/M
3300006331|Ga0068488_1265269All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2290Open in IMG/M
3300006331|Ga0068488_1317452Not Available865Open in IMG/M
3300006336|Ga0068502_1411819All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales534Open in IMG/M
3300006336|Ga0068502_1869389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium615Open in IMG/M
3300006338|Ga0068482_1346222Not Available2051Open in IMG/M
3300006339|Ga0068481_1137571All Organisms → cellular organisms → Bacteria → Proteobacteria1866Open in IMG/M
3300006339|Ga0068481_1345039All Organisms → cellular organisms → Bacteria → Proteobacteria1774Open in IMG/M
3300006340|Ga0068503_10198998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique4106Open in IMG/M
3300006341|Ga0068493_10576681Not Available1078Open in IMG/M
3300006341|Ga0068493_10636930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales803Open in IMG/M
3300006341|Ga0068493_10676084Not Available662Open in IMG/M
3300006341|Ga0068493_10786895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium676Open in IMG/M
3300006347|Ga0099697_1190241All Organisms → cellular organisms → Bacteria → Proteobacteria1412Open in IMG/M
3300006414|Ga0099957_1282419Not Available645Open in IMG/M
3300006567|Ga0099958_1057656Not Available1191Open in IMG/M
3300006567|Ga0099958_1257532Not Available841Open in IMG/M
3300006902|Ga0066372_10640792Not Available635Open in IMG/M
3300007283|Ga0066366_10228729Not Available772Open in IMG/M
3300007283|Ga0066366_10582987All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium500Open in IMG/M
3300007291|Ga0066367_1456932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales517Open in IMG/M
3300007504|Ga0104999_1032501All Organisms → cellular organisms → Bacteria → Proteobacteria2678Open in IMG/M
3300007508|Ga0105011_1027566Not Available3048Open in IMG/M
3300007514|Ga0105020_1410001Not Available775Open in IMG/M
3300008735|Ga0115657_1216283Not Available985Open in IMG/M
3300009104|Ga0117902_1484956Not Available1055Open in IMG/M
3300009126|Ga0118723_1024595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter4517Open in IMG/M
3300009173|Ga0114996_10226039Not Available1496Open in IMG/M
3300009173|Ga0114996_10737754Not Available718Open in IMG/M
3300009173|Ga0114996_10863899Not Available650Open in IMG/M
3300009173|Ga0114996_11068413Not Available570Open in IMG/M
3300020367|Ga0211703_10071591Not Available851Open in IMG/M
3300020369|Ga0211709_10155914Not Available694Open in IMG/M
3300020390|Ga0211555_10315943Not Available582Open in IMG/M
3300020398|Ga0211637_10451681Not Available508Open in IMG/M
3300020399|Ga0211623_10332382Not Available542Open in IMG/M
3300020418|Ga0211557_10500745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium529Open in IMG/M
3300020425|Ga0211549_10103712Not Available1094Open in IMG/M
3300020425|Ga0211549_10309677Not Available640Open in IMG/M
3300020425|Ga0211549_10333730Not Available617Open in IMG/M
3300020427|Ga0211603_10340751Not Available576Open in IMG/M
3300020443|Ga0211544_10049637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1643Open in IMG/M
3300020455|Ga0211664_10266059Not Available795Open in IMG/M
3300020458|Ga0211697_10483130All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium517Open in IMG/M
3300021791|Ga0226832_10165702Not Available847Open in IMG/M
3300021978|Ga0232646_1199621Not Available676Open in IMG/M
3300022225|Ga0187833_10112126Not Available1726Open in IMG/M
3300025179|Ga0208204_128397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium611Open in IMG/M
3300025184|Ga0208832_115863Not Available525Open in IMG/M
3300025193|Ga0208061_101733Not Available2913Open in IMG/M
3300025202|Ga0208330_1042915All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium520Open in IMG/M
3300025214|Ga0208337_1001757Not Available2911Open in IMG/M
3300025222|Ga0208831_1004379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2330Open in IMG/M
3300025265|Ga0208467_1041165Not Available738Open in IMG/M
3300026086|Ga0207964_1051615Not Available931Open in IMG/M
3300026091|Ga0207962_1080900Not Available621Open in IMG/M
3300026204|Ga0208521_1133310Not Available641Open in IMG/M
3300026262|Ga0207990_1090204Not Available784Open in IMG/M
3300026262|Ga0207990_1095559Not Available754Open in IMG/M
3300026279|Ga0208411_1137431Not Available653Open in IMG/M
3300026321|Ga0208764_10387569Not Available658Open in IMG/M
3300026321|Ga0208764_10529706Not Available536Open in IMG/M
3300027827|Ga0209035_10070716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1705Open in IMG/M
3300027838|Ga0209089_10161777Not Available1341Open in IMG/M
3300027839|Ga0209403_10174658Not Available1300Open in IMG/M
3300027844|Ga0209501_10041488All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3393Open in IMG/M
3300028190|Ga0257108_1158175Not Available656Open in IMG/M
3300028192|Ga0257107_1090478Not Available919Open in IMG/M
3300028489|Ga0257112_10242360Not Available619Open in IMG/M
3300028489|Ga0257112_10280490Not Available563Open in IMG/M
3300031757|Ga0315328_10250693Not Available1036Open in IMG/M
3300031757|Ga0315328_10745471Not Available551Open in IMG/M
3300031757|Ga0315328_10773231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium539Open in IMG/M
3300031774|Ga0315331_10737372Not Available693Open in IMG/M
3300031775|Ga0315326_10766538Not Available603Open in IMG/M
3300031775|Ga0315326_10804729Not Available585Open in IMG/M
3300031801|Ga0310121_10238076Not Available1090Open in IMG/M
3300031801|Ga0310121_10502674Not Available671Open in IMG/M
3300031801|Ga0310121_10599978Not Available596Open in IMG/M
3300031801|Ga0310121_10718556Not Available528Open in IMG/M
3300031804|Ga0310124_10709838Not Available569Open in IMG/M
3300031861|Ga0315319_10072051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1650Open in IMG/M
3300031861|Ga0315319_10394149Not Available695Open in IMG/M
3300031886|Ga0315318_10690669Not Available574Open in IMG/M
3300032006|Ga0310344_10334769Not Available1296Open in IMG/M
3300032019|Ga0315324_10134906Not Available927Open in IMG/M
3300032048|Ga0315329_10132478Not Available1285Open in IMG/M
3300032048|Ga0315329_10206463Not Available1033Open in IMG/M
3300032048|Ga0315329_10344792Not Available792Open in IMG/M
3300032130|Ga0315333_10364597Not Available683Open in IMG/M
3300032278|Ga0310345_10381917Not Available1324Open in IMG/M
3300032278|Ga0310345_10985335Not Available823Open in IMG/M
3300032278|Ga0310345_12092016Not Available549Open in IMG/M
3300032360|Ga0315334_10442781Not Available1106Open in IMG/M
3300032360|Ga0315334_10932218Not Available752Open in IMG/M
3300032360|Ga0315334_11060065Not Available701Open in IMG/M
3300032360|Ga0315334_11268627Not Available635Open in IMG/M
3300032360|Ga0315334_11887164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium506Open in IMG/M
3300032820|Ga0310342_101436985Not Available820Open in IMG/M
3300032820|Ga0310342_101662398Not Available761Open in IMG/M
3300032820|Ga0310342_101794591Not Available732Open in IMG/M
3300034695|Ga0372840_176800Not Available636Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine29.13%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater14.96%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine10.24%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine9.45%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine8.66%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.09%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater7.09%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine7.09%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine3.94%
Water ColumnEnvironmental → Aquatic → Marine → Coastal → Unclassified → Water Column0.79%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.79%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000965Marine microbial communities from the Deep Indian Ocean - MP1241EnvironmentalOpen in IMG/M
3300001585Marine microbial communities from the Deep Atlantic Ocean - MP2913EnvironmentalOpen in IMG/M
3300005398Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201EnvironmentalOpen in IMG/M
3300005400Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261EnvironmentalOpen in IMG/M
3300005402Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73EnvironmentalOpen in IMG/M
3300005408Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72EnvironmentalOpen in IMG/M
3300005431Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75EnvironmentalOpen in IMG/M
3300005567Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF82AEnvironmentalOpen in IMG/M
3300005593Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86EnvironmentalOpen in IMG/M
3300005595Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47BEnvironmentalOpen in IMG/M
3300005953Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_AEnvironmentalOpen in IMG/M
3300006012Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300006013Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_BEnvironmentalOpen in IMG/M
3300006093Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189EnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006306Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500mEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006309Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500mEnvironmentalOpen in IMG/M
3300006323Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500mEnvironmentalOpen in IMG/M
3300006326Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770mEnvironmentalOpen in IMG/M
3300006331Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006347Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000mEnvironmentalOpen in IMG/M
3300006414Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500mEnvironmentalOpen in IMG/M
3300006567Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770mEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300007283Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_BEnvironmentalOpen in IMG/M
3300007291Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300007504Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007508Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007514Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300008735Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009104Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009126Combined Assembly of Gp0139357, Gp0139356EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300020367Marine microbial communities from Tara Oceans - TARA_B100000508 (ERX556112-ERR599005)EnvironmentalOpen in IMG/M
3300020369Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)EnvironmentalOpen in IMG/M
3300020390Marine microbial communities from Tara Oceans - TARA_B100002049 (ERX555953-ERR598985)EnvironmentalOpen in IMG/M
3300020398Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)EnvironmentalOpen in IMG/M
3300020399Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)EnvironmentalOpen in IMG/M
3300020418Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)EnvironmentalOpen in IMG/M
3300020425Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964)EnvironmentalOpen in IMG/M
3300020427Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)EnvironmentalOpen in IMG/M
3300020443Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)EnvironmentalOpen in IMG/M
3300020455Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)EnvironmentalOpen in IMG/M
3300020458Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300021978Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmerEnvironmentalOpen in IMG/M
3300022225Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025179Marine microbial communities from the Deep Pacific Ocean - MP2252 (SPAdes)EnvironmentalOpen in IMG/M
3300025184Marine microbial communities from the Deep Pacific Ocean - MP2158 (SPAdes)EnvironmentalOpen in IMG/M
3300025193Marine microbial communities from the Deep Atlantic Ocean - MP0555 (SPAdes)EnvironmentalOpen in IMG/M
3300025202Marine microbial communities from the Deep Pacific Ocean - MP1896 (SPAdes)EnvironmentalOpen in IMG/M
3300025214Marine microbial communities from the Deep Atlantic Ocean - MP0371 (SPAdes)EnvironmentalOpen in IMG/M
3300025222Marine microbial communities from the Deep Pacific Ocean - MP2253 (SPAdes)EnvironmentalOpen in IMG/M
3300025265Marine microbial communities from the Deep Pacific Ocean - MP2098 (SPAdes)EnvironmentalOpen in IMG/M
3300026086Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026091Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026204Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47 (SPAdes)EnvironmentalOpen in IMG/M
3300026262Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)EnvironmentalOpen in IMG/M
3300026279Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)EnvironmentalOpen in IMG/M
3300026321Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)EnvironmentalOpen in IMG/M
3300027827Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300028190Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000mEnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300028489Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000mEnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031804Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5EnvironmentalOpen in IMG/M
3300031861Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032019Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515EnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032130Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034695Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500mEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12120J13076_10015213300000965Deep OceanPKNRVNCGGKNSVGKAIRNTATIPAYKKRLNNNDLKSNI*
JGI11880J15749_100092043300001585Deep OceanANCGGKNSVGKAIRNTATIPAYKKRLNNNDLKSNI*
Ga0066858_1016108713300005398MarineKNFPKNKANLGGINSVGIAIKNTRTIPVYKKRLNINDLINNI*
Ga0066867_1021235323300005400MarinePKNFPKNKANLGGINSVGIAIKNTRTIPVYKKRLNINDLISNIYLSCILVFD*
Ga0066855_1006762213300005402MarinePKNFPKNKVNLGGINRVGIAIKNTRIIPVYKKRLNSNDLISNI*
Ga0066848_1006371013300005408MarineQKKSYNKNYVVPKNFPKNKENLGGINSVGIAIKNTRTIPVYKKRLNINDLISNI*
Ga0066848_1007842023300005408MarinePKNKANLGGINSVGIAIKNTRTIPVYKKRLNINDLISNI*
Ga0066854_1014637523300005431MarineKNFPKNKANLGGINSVGIAIKNTRTIPVYKKRLNINDLISNIYLSCILVFD*
Ga0066844_1008807413300005567MarinePKNFPNSKVNFGGKNNVGSAIKNTEVIPVYKKRLNSNDLKSSI*
Ga0066837_1033506813300005593MarineRNFPNNKVNFGGKNNVGSAIKNTATIPVYKKTLNNSDLKSFI*
Ga0066833_1006517313300005595MarineKNKANLGGINSVGIAIKNTRIIPVYKKRLNINDLINNI*
Ga0066383_1002010113300005953MarineKNKVNLGGINSVGIAIKNTRTIPVYKKRLNSKDLISNI*
Ga0066383_1010551423300005953MarinePKNFPKNKVNLGGINSVGMAIKNTRTIPVYKKRLNNNDLVSNI*
Ga0066374_1005887023300006012MarinePKNFPNNKVIFVGKNSAGNAIKKTTIIPVYKKRLNNNDLKSDIYISC*
Ga0066382_1020828513300006013MarinePKNFPKNKVNLGGINSVGIAIKNTRTIPVYKKRLNSNDLISNI*
Ga0066382_1022918923300006013MarineKVNFGGKNNVGSAIKNTATIPVYKKRLNNNDLKSSI*
Ga0082019_107580323300006093MarineKNKVNFDGKNSVGNAIKKTTTIPVYKKRLNNNDLKISI*
Ga0066836_1016072123300006166MarineNKVNFGGKNNVGNAIRNIKIIPVYKKILNNNDLSSVILIKLKINY*
Ga0066836_1019704313300006166MarineNNRVNFVGRNNDGIAIKNTATIPAYKNKLKSNDLKSSILIKFYINY*
Ga0068469_149330213300006306MarineKNFPNSKVNFGGKNNAGSAIKNTATIPVYKKRLNNNDLISSI*
Ga0068470_149853623300006308MarinePKNFPKNKANLGGINRVGIAIKNTKTIPAYKKRLNNNDLKSNI*
Ga0068479_120427413300006309MarineGKNKVGSAIKNTETIPAYKKKLNSNDLKSSMKIRY*
Ga0068497_136853713300006323MarineFPKNKVNLGGINNVGIAIKNTKTIPVYKKRLNNSDLISNI*
Ga0068477_120427713300006326MarineNCGGRNSVGKAIRNTAMIPVYKKRLNNNDLKSSI*
Ga0068477_121028323300006326MarineNFPNSKVNFGGKNNVGSAIKNTETIPVYKKRLNNNDLKSCI*
Ga0068488_125819313300006331MarineLLQFKQLKLHSPKHFPKNKVNFGGNKSVGKAIRNTEAIPIYKKRLNNNDLNNSI*
Ga0068488_126526953300006331MarineRHFPKNRVNCGGKNSVGKAIRNTMTIPAYKKRLNNNDFNSSI*
Ga0068488_131745223300006331MarineNKVNFGGKNNVGSAIINTETIPVYKKRLNSNDLKSSIQIRC*
Ga0068502_141181923300006336MarineNEKIPKNKTNLGGINSVGIAIKNTRTIPVYKKRLNINDLISNI*
Ga0068502_186938913300006336MarineDLGFKNFPNSKVIFVGNNSAGNAITKTTIIPTYKKRLNNNDLKSSI*
Ga0068482_134622233300006338MarineNKANLGGINRVGIAIKNTKTIPVYKKKLNSNDLISNI*
Ga0068481_113757113300006339MarineKVNFGGKNNVGSATKNTETIPVYKKKLNSNDLKSSIPIRC*INY*
Ga0068481_134503933300006339MarineF*GKNNVGSAIKNTETIPVYKKKLNSNDLKSSIQIRR*INY*
Ga0068503_1019899863300006340MarineTSRFFGGKNNVGSAIKNTATIPVYKKRLNNNDLKSSI*
Ga0068493_1057668123300006341MarinePNSKVIFVGKNSAGNAIKKTTIIPVYKKRLNNNDLKSDICINC*INY*
Ga0068493_1063693033300006341MarineNFPNSKVNFGGKNNVGSAIKNTETIPVYKKRLNSNDLKSSIQIRC*
Ga0068493_1067608423300006341MarineCPKNFPKNNVNLGVINKAGIAIKNTVTIPVYKKRLNNNDLKSNI*
Ga0068493_1078689513300006341MarineKVNCGGRNSVGKAIKNTAIIPEYKKRLNNNDFNSSI*
Ga0099697_119024113300006347MarineKVNFGGKNNVGSAITKTAIIPVYKKRLNNNDLISNI*
Ga0099957_128241923300006414MarineCPKNFPKNKVNLEGINSVGIAIKNTRTIPVYKKKLNINDLISDI*
Ga0099958_105765613300006567MarineSNLVKFSKNKVNLGGINRVGIAIKNTRIIPVYKKRLNSNDLISNI*
Ga0099958_125753223300006567MarineSKVNLGGKNNVGNAIKKTVTIPTYKKILNINDLKSSI*
Ga0066372_1064079223300006902MarineFPKNKVNLGGINSVGIAIKNTKTIPAYKKRLNSSDLISNI*
Ga0066366_1022872923300007283MarineVNFGGKNNVGIAIKKTITIPTYKKRLNNNDLKSDI*
Ga0066366_1058298713300007283MarinePKNFPNSKVNFGGKNNVGSAIKNTEAIPVYKKRLNSNDLKSSI*
Ga0066367_145693213300007291MarineNFPKNKANLGGINSVGIAIKNTRTIPVYKKRLNINDLISNI*
Ga0104999_103250113300007504Water ColumnNKVIFVGKNKAGNAIKNTKEIPAYKKKLNNNDLKSDICIIY*
Ga0105011_102756653300007508MarinePNNKVNFGGKNSVGNAIIKTETIPVYRKKLNINDLTSSIL*
Ga0105020_141000113300007514MarineRNFPNNKVNFEGNNNEGRAIKNTVTIHVYKKRLNNNDLKRSI*
Ga0115657_121628323300008735MarinePNSKVDFRGKNNVGSAIKNTETIPVYKKRLNNNDLKSSIQIRR*
Ga0117902_148495613300009104MarineNFPNNKANFEGKNNVGSAIKNMETIPVYKKRLNSNDLKSSI*
Ga0118723_102459573300009126MarineFGGKNSVGNAIIKTDTIPVYRKKLNINDLTSNIL*
Ga0114996_1022603933300009173MarinePRNFPNSKVNFGGKNNDGRAIKNITIIPKYKNRLKSKDLKSSILIKSSLIIN*
Ga0114996_1073775413300009173MarineNSKVNIGGKNSVGNAIKKTATIPAYKKILNINDLKRSIRIMY*
Ga0114996_1086389913300009173MarineKVDFAGKNRVGSANKNTKTIPKYKKKLNNNDFTISILIRFFY*
Ga0114996_1106841323300009173MarineNKVILDGNNKEGNAIKNTTTIPRYKKKLKSNDLNSNILIKY*
Ga0211703_1007159123300020367MarineFPKNRANCGGKNSVGKAIRNTATIPAYKKRLNNNDLKSNI
Ga0211709_1015591413300020369MarineNKVNFGGKNNVGSAIKNTATIPVYKKRLNNNDLKSSI
Ga0211555_1031594313300020390MarinePKNFPNNKVNLGGKNNVGRAIKNTVTIPVYKKRLNNNDLKSII
Ga0211637_1045168113300020398MarineKNFPNSKVNFGGKNNAGSAIKNTTTIPVYKKRLNNNDLKSSI
Ga0211623_1033238213300020399MarinePNSKVIFVGKNSAGNAIKKTTIIPVYKKRLNNNDLKSDIYISD
Ga0211557_1050074523300020418MarineFPKSKVIFAGKNSDGNATKKTIAIPAYRKKLNNNDLKSDILLVVELIIN
Ga0211549_1010371213300020425MarineNNKVNFGGKNNAGSAIKNTATIPAYRKRLNNNDLKSSI
Ga0211549_1030967723300020425MarineNFPNNKVNFGGKNNVGSAIKNTATIPVYKKRLNNNDLKSSI
Ga0211549_1033373013300020425MarineVIFVGKISAGNAIKKTTIIPVYKKRLNNNDLKSDICINC
Ga0211603_1034075113300020427MarineKVIFVGKNSAGNAIKKTTIIPVYKKRLNNNDLKSDICINC
Ga0211544_1004963733300020443MarineANCGGKNSVGKAIRNTVTIPAYKKRLNNNDLKSNI
Ga0211664_1026605913300020455MarineKNKVNFGGKNKVGNAIIKTTTIPKYRTELNNNDLKSNI
Ga0211697_1048313023300020458MarineGGRNNVGKAIRNTMAIPAYKKRLNNNDFNSSIXTKS
Ga0226832_1016570213300021791Hydrothermal Vent FluidsWPKNFPNNKTNFGGNNSAGSAIKNTDIIPVYKKRLNNNDFKSSI
Ga0232646_119962123300021978Hydrothermal Vent FluidsKNKVNLGGINSVGIAIKNTRTIPVYKKRLNSNDLISNI
Ga0187833_1011212613300022225SeawaterCPKNFPKNKANLGGINSVGIAIKNTRTIPVYKKRLNINDLINNI
Ga0208204_12839723300025179Deep OceanRANCGGKNSVGKAIRNTATIPAYKKRLNNNDLKSNI
Ga0208832_11586323300025184Deep OceanKNFPKNKANLGGINSVGIAIKNTKTIPIYKKRLNNNDLISNI
Ga0208061_10173313300025193Deep OceanRHFPKSRANCGGKNSVGKAIRNTATIPAYKKRLNNNDLKSNI
Ga0208330_104291513300025202Deep OceanKVNLGGINSVGIAIKNTKTIPIYKKRLNNNDLISNI
Ga0208337_100175743300025214Deep OceanPKNFPKNKVNLGGINSVGIAIKNTRTIPVYKKRLNSNDLISNI
Ga0208831_100437913300025222Deep OceanKNRANCGGKNSVGKAIRNTATIPEYKKRLNNNDLKSNI
Ga0208467_104116523300025265Deep OceanKSFPKNKVNFDGKNSVGNAIKKTTTIPVYKKRLNNNDLKSSI
Ga0207964_105161513300026086MarineKNKVNLGGINSVGIAIKNTRTIPVYKKRLNNNDLISNI
Ga0207962_108090013300026091MarineKANLGGINSVGIAIKNTKTIPVYKKRLNNNDLKSDICINC
Ga0208521_113331013300026204MarineRSFPKNKVNFDGKNSVGNAIKKTTTIPVYKKRLNNNDLKSSI
Ga0207990_109020413300026262MarineANLGGINSVGIAIKNTRTIPVYKKRLNINDLISNIYLSCILVFD
Ga0207990_109555913300026262MarineANLGGINSVGIAIKNTRTIPVYKKRLNINDLINNI
Ga0208411_113743123300026279MarineNKVIFAGKNSVGNAIKKTVAIPVYKKRLNNNDLKSSI
Ga0208764_1038756923300026321MarineAGKNRPGNAIKKTIIIPVYKKRLNNNDLKSSICISSLN
Ga0208764_1052970613300026321MarineKSLPNIKVNFGGKNSVGNAIKKTTIIPRYIKKLNNSDLISNIKIDFLINR
Ga0209035_1007071613300027827MarineNKANLGGINSVGIAIKNTRTIPVYKKRLNINDLISNI
Ga0209089_1016177723300027838MarinePKNKVNFAGRTNEGTAIKNTVTIPVYKNRLKINDLKSSILIKS
Ga0209403_1017465813300027839MarineGSSSVGNAIRNTVIIPVYKKVLNNNDLKSSILIKY
Ga0209501_1004148853300027844MarineRNFPNNKVNFGGKNNVGSAIKNIATIPVYKKRLNNNDLKSSI
Ga0257108_115817513300028190MarineSKVNFGGSNNVGNAIKNTETIPAYKKMLNSNDLKSSILIKS
Ga0257107_109047823300028192MarineNSKVIFVGNNSAGNAIKKTTIIPVYKKRLNNNDLKSDICINCXINY
Ga0257112_1024236013300028489MarinePKSFPKNKVNCGGRNSVGKAIKNTVTIPEYKKRLNNNDFNSSIXTKS
Ga0257112_1028049023300028489MarinePKNLPNNKVNFGGKNNVGNAIKNTETIPVYKKRLKSNDLKSSI
Ga0315328_1025069323300031757SeawaterNFPNNKVNFGGKNSVGSAIKNTATIPVYKKKLNNNDLKSSI
Ga0315328_1074547123300031757SeawaterNSKVNFGGKNNVGSAIKNTETIPAYKKKLNSNDLKSSMKIRY
Ga0315328_1077323113300031757SeawaterKNFPNNKVNFGGKNSVGKAIINTETIPVYRKKLNINDLTSSIL
Ga0315331_1073737223300031774SeawaterANFDGSNNVGSAIKNTTTIPAYKKKLNNNDLKSSI
Ga0315326_1076653813300031775SeawaterVNFGGKNSVGNAIIKTDTIPVYRKKLNINDLTSSIL
Ga0315326_1080472913300031775SeawaterNFPNNNVNFGGKNNVGNAIKNIRIIPIYRNRLNNSDLKRSI
Ga0310121_1023807613300031801MarineKVNFGGKNNVGSAIKNTDTIPVYKKKLNSNDLKSSIPIRCXINY
Ga0310121_1050267423300031801MarineWPKNFPNNKVNFEGKSNVGNAIKNTETIPVYKKKLNNNDLKSSILIKT
Ga0310121_1059997813300031801MarineXPKNFPNSKVNFGGKNNVGSAIKNTETIPVYKKMLNSNDLKSIIQIRCXINY
Ga0310121_1071855613300031801MarineNSKVNFGGKNNAGSAIKNTTTIPVYKKRLNNNDLKSNI
Ga0310124_1070983823300031804MarineXPKNFQNSKVNFGGKNNVGSAIKNTETIPVYKKKLNSNDLKSSIPIRCXINY
Ga0315319_1007205113300031861SeawaterPKNFPNNKVNFAGKNSVGNAIKKTVTIPVYKKILNSNDLNSNI
Ga0315319_1039414923300031861SeawaterSKVNFGGKNNVGSATKNTEVIPVYKKRLNSNDLKSSI
Ga0315318_1069066913300031886SeawaterFGGKNNVGSAMKNTETIPVYKKRLNSNDLKSSIQIRCRINC
Ga0310344_1033476923300032006SeawaterKNFPNSKVIFGGKNSEGNAIKKTTTIPVYKKKLNNIDLKSSIYICSLINY
Ga0315324_1013490613300032019SeawaterXPKNFPNNKVIFGGKNSAGNAIKKTTTIPVYKKRLNSNDLKSSI
Ga0315329_1013247813300032048SeawaterVIFVGKNSAGNAIKKTTIIPVYKKRLNNNDLKSDIYISD
Ga0315329_1020646313300032048SeawaterPKNFPNNKTNFGGNNSAGSAIKNTDIIPVYKKRLNNNDFKSSI
Ga0315329_1034479223300032048SeawaterNFPNSKVIFVGKNSAGNAIKKTTIIPVYKKRLNNNDLKSDIYISCXINY
Ga0315333_1036459713300032130SeawaterPKNLPNNKVNFGGKNNVGNAIMNTKIIPVYKNILNNNDLNSVILIKLKINY
Ga0310345_1038191713300032278SeawaterNFPNSKVNFGGKNSVGNAIKKTATIPEYKKRLKINDLKSSI
Ga0310345_1098533523300032278SeawaterNKVNLGGIKSVGIAIKNTKTIPVYKKRLNSSDLISNI
Ga0310345_1209201623300032278SeawaterKVNFGGKNNVGSAIKNTATIPVYKKRLNNNDLISSI
Ga0315334_1044278113300032360SeawaterFGGKNNVGSAIKNTETIPVYKKRLNSNDLRSSIQIRC
Ga0315334_1093221813300032360SeawaterPKNFPKYKVNCGGRNSVGKAIKNTATIPEYKKRLNNNDFNSSI
Ga0315334_1106006523300032360SeawaterPNNKTNFGGNNSVGSAIKNTDIIPVYKKRLNNNDFKSSI
Ga0315334_1126862713300032360SeawaterFPNSKVNFAGRNNVGNAIKNTKTIPAYKKMLNSNDLKSSIQIRC
Ga0315334_1188716423300032360SeawaterVNCGGSKRVGKAIKNTETIPVYKKRLNNNDFNSSIXAKS
Ga0310342_10143698523300032820SeawaterKNFPNSKVIFTGKNSAGNAIKKTTIIPVYKKRLNSKDLKSDIYIGC
Ga0310342_10166239813300032820SeawaterVNFGGKNNAGSAIKNTTTIPVYKKRLNNNDLKSSI
Ga0310342_10179459123300032820SeawaterNCKVNFGGKNNVGNAIKNTATIPVYKKRLNNNDLKSSI
Ga0372840_176800_3_1163300034695SeawaterDKVNFGGKNNVGSAIRNTTIIPVYKKKLNNKDLKSSI


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