Metagenome Family F063932

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063932
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	66 residues
Representative Sequence	MIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLP
Number of Associated Samples	113
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.47 %
% of genes near scaffold ends (potentially truncated)	32.56 %
% of genes from short scaffolds (< 2000 bps)	65.12 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.016 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.178 % of family members)
Environment Ontology (ENVO)	Unclassified (20.930 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.186 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.87% β-sheet: 29.35% Coil/Unstructured: 59.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
b.40.4.3: Nucleic acid-binding proteins	d1jb7a2	1jb7	0.61
b.40.4.3: Nucleic acid-binding proteins	d1jb7a2	1jb7	0.61
b.43.4.2: Riboflavin synthase domain-like	d1tvca1	1tvc	0.6
b.62.1.4: Cyclophilin-like	d2phcb1	2phc	0.6
b.40.6.3: MOP-like	d3d31a1	3d31	0.6
b.40.4.0: Nucleic acid-binding proteins	d7b7uh_	7b7u	0.6
b.43.4.2: Riboflavin synthase domain-like	d1tvca1	1tvc	0.6
b.62.1.4: Cyclophilin-like	d2phcb1	2phc	0.6
b.40.6.3: MOP-like	d3d31a1	3d31	0.6
b.40.4.0: Nucleic acid-binding proteins	d7b7uh_	7b7u	0.6

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00383	dCMP_cyt_deam_1	3.10
PF08238	Sel1	3.10
PF02586	SRAP	2.33
PF14903	WG_beta_rep	2.33
PF00589	Phage_integrase	2.33
PF07676	PD40	1.55
PF13538	UvrD_C_2	1.55
PF08308	PEGA	1.55
PF13604	AAA_30	1.55
PF00078	RVT_1	1.55
PF14492	EFG_III	1.55
PF03714	PUD	0.78
PF08808	RES	0.78
PF04250	DUF429	0.78
PF12681	Glyoxalase_2	0.78
PF01872	RibD_C	0.78
PF08937	DUF1863	0.78
PF07730	HisKA_3	0.78
PF13240	zinc_ribbon_2	0.78
PF01648	ACPS	0.78
PF16793	RepB_primase	0.78
PF02899	Phage_int_SAM_1	0.78
PF03466	LysR_substrate	0.78
PF13419	HAD_2	0.78
PF06114	Peptidase_M78	0.78
PF02887	PK_C	0.78
PF14163	SieB	0.78
PF03764	EFG_IV	0.78
PF00154	RecA	0.78
PF01381	HTH_3	0.78
PF08867	FRG	0.78
PF03235	DUF262	0.78
PF02224	Cytidylate_kin	0.78
PF01556	DnaJ_C	0.78
PF13620	CarboxypepD_reg	0.78
PF03572	Peptidase_S41	0.78
PF03795	YCII	0.78
PF13418	Kelch_4	0.78
PF04471	Mrr_cat	0.78
PF13470	PIN_3	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.33
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.78
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.78
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.78
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	0.78
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.78
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0480	Translation elongation factor EF-G, a GTPase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.78
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.78
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.02 %
Unclassified	root	N/A	36.43 %
Viruses	superkingdom	All Organisms → Viruses	1.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.02 %
Unclassified	root	N/A	36.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.18 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	2.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.78 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.78 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	2.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
Idiomarinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae	0.78 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.78 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.78 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Paracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium	7.75 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	2.33 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Roseicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella	0.78 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.78 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.78 %
Idiomarina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → Idiomarina	0.78 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.78 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Paracidobacterium acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	7.75 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	2.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.78 %
unclassified Roseicella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella	0.78 %
unclassified Idiomarina	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → Idiomarina → unclassified Idiomarina	0.78 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.78 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.78 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.78 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.78 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Paracidobacterium acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	7.75 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	2.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Roseicella sp. DB1501	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	0.78 %
Idiomarina sp. 017G	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → Idiomarina → unclassified Idiomarina → Idiomarina sp. 017G	0.78 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.78 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.78 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.78 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.78 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.78 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886015\|FOassembled-_contig00002	All Organisms → cellular organisms → Bacteria	160135	Open in IMG/M
3300000318\|WSSedL1CaDRAFT_10007842	All Organisms → cellular organisms → Bacteria	3662	Open in IMG/M
3300004092\|Ga0062389_101395466	Not Available	885	Open in IMG/M
3300004114\|Ga0062593_100042993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseicella → unclassified Roseicella → Roseicella sp. DB1501	2732	Open in IMG/M
3300004156\|Ga0062589_100378061	All Organisms → Viruses → Predicted Viral	1139	Open in IMG/M
3300004480\|Ga0062592_100049145	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300004635\|Ga0062388_102138150	Not Available	581	Open in IMG/M
3300005330\|Ga0070690_101450063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005542\|Ga0070732_10007548	All Organisms → cellular organisms → Bacteria	5918	Open in IMG/M
3300005563\|Ga0068855_100638868	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300005591\|Ga0070761_10016273	All Organisms → cellular organisms → Bacteria	4130	Open in IMG/M
3300005602\|Ga0070762_10193808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	1240	Open in IMG/M
3300005617\|Ga0068859_101045443	Not Available	897	Open in IMG/M
3300005712\|Ga0070764_10527089	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005841\|Ga0068863_102268219	Not Available	553	Open in IMG/M
3300005921\|Ga0070766_10396248	Not Available	903	Open in IMG/M
3300006052\|Ga0075029_100604342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Idiomarinaceae → Idiomarina → unclassified Idiomarina → Idiomarina sp. 017G	733	Open in IMG/M
3300006175\|Ga0070712_100235830	Not Available	1455	Open in IMG/M
3300006804\|Ga0079221_10025489	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300006806\|Ga0079220_10315962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	974	Open in IMG/M
3300006893\|Ga0073928_10020264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6864	Open in IMG/M
3300007982\|Ga0102924_1003580	All Organisms → cellular organisms → Bacteria	16246	Open in IMG/M
3300009038\|Ga0099829_10980198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	701	Open in IMG/M
3300009088\|Ga0099830_10968966	Not Available	704	Open in IMG/M
3300009090\|Ga0099827_11212618	Not Available	656	Open in IMG/M
3300009174\|Ga0105241_10737577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	902	Open in IMG/M
3300009624\|Ga0116105_1001829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4752	Open in IMG/M
3300009635\|Ga0116117_1001763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5735	Open in IMG/M
3300009638\|Ga0116113_1184363	Not Available	534	Open in IMG/M
3300009759\|Ga0116101_1008080	All Organisms → cellular organisms → Bacteria → Proteobacteria	1850	Open in IMG/M
3300010339\|Ga0074046_10153247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1469	Open in IMG/M
3300010341\|Ga0074045_10055500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2850	Open in IMG/M
3300010379\|Ga0136449_101320296	Not Available	1122	Open in IMG/M
3300010396\|Ga0134126_10109160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3391	Open in IMG/M
3300010399\|Ga0134127_10360614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1423	Open in IMG/M
3300011270\|Ga0137391_10151341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2021	Open in IMG/M
3300011271\|Ga0137393_10050016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	3267	Open in IMG/M
3300011271\|Ga0137393_11521366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300012189\|Ga0137388_11309657	Not Available	663	Open in IMG/M
3300012202\|Ga0137363_10057279	All Organisms → cellular organisms → Bacteria → Proteobacteria	2817	Open in IMG/M
3300012209\|Ga0137379_10528153	Not Available	1088	Open in IMG/M
3300012210\|Ga0137378_10335231	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300012363\|Ga0137390_10261064	Not Available	1717	Open in IMG/M
3300012363\|Ga0137390_10924650	Not Available	826	Open in IMG/M
3300013104\|Ga0157370_12129659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	502	Open in IMG/M
3300014156\|Ga0181518_10243165	Not Available	917	Open in IMG/M
3300014325\|Ga0163163_13306622	Not Available	503	Open in IMG/M
3300014492\|Ga0182013_10019550	All Organisms → cellular organisms → Bacteria	6206	Open in IMG/M
3300014495\|Ga0182015_10911934	Not Available	550	Open in IMG/M
3300014501\|Ga0182024_10074526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	5107	Open in IMG/M
3300014501\|Ga0182024_10164310	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300014501\|Ga0182024_10172009	All Organisms → cellular organisms → Bacteria	3004	Open in IMG/M
3300014655\|Ga0181516_10284668	Not Available	840	Open in IMG/M
3300014838\|Ga0182030_10141919	All Organisms → cellular organisms → Bacteria	3091	Open in IMG/M
3300016445\|Ga0182038_10239336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1452	Open in IMG/M
3300017946\|Ga0187879_10039917	All Organisms → cellular organisms → Bacteria → Proteobacteria	2801	Open in IMG/M
3300017946\|Ga0187879_10435543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	726	Open in IMG/M
3300017948\|Ga0187847_10402468	Not Available	752	Open in IMG/M
3300018006\|Ga0187804_10236519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	786	Open in IMG/M
3300018012\|Ga0187810_10041412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1718	Open in IMG/M
3300018038\|Ga0187855_10442018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	758	Open in IMG/M
3300018038\|Ga0187855_10915935	Not Available	512	Open in IMG/M
3300018057\|Ga0187858_10380641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	880	Open in IMG/M
3300020579\|Ga0210407_10007490	All Organisms → cellular organisms → Bacteria → Acidobacteria	8233	Open in IMG/M
3300020580\|Ga0210403_10214419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	1580	Open in IMG/M
3300020581\|Ga0210399_10000223	All Organisms → cellular organisms → Bacteria → Acidobacteria	45651	Open in IMG/M
3300020581\|Ga0210399_10041749	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300020581\|Ga0210399_10524698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300020583\|Ga0210401_10276283	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300021168\|Ga0210406_10992688	Not Available	625	Open in IMG/M
3300021180\|Ga0210396_10217427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	1704	Open in IMG/M
3300021181\|Ga0210388_10626394	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300021407\|Ga0210383_10092043	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300021474\|Ga0210390_11188047	Not Available	616	Open in IMG/M
3300021477\|Ga0210398_10002083	All Organisms → cellular organisms → Bacteria	19771	Open in IMG/M
3300021477\|Ga0210398_10094328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2430	Open in IMG/M
3300022557\|Ga0212123_10006205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20129	Open in IMG/M
3300022557\|Ga0212123_10014823	All Organisms → cellular organisms → Bacteria → Acidobacteria	9852	Open in IMG/M
3300022881\|Ga0224545_1055293	Not Available	560	Open in IMG/M
3300023090\|Ga0224558_1119899	Not Available	886	Open in IMG/M
3300025406\|Ga0208035_1005011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2123	Open in IMG/M
3300025910\|Ga0207684_10594004	Not Available	946	Open in IMG/M
3300025911\|Ga0207654_10474334	Not Available	880	Open in IMG/M
3300025914\|Ga0207671_10104967	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300025917\|Ga0207660_11717823	Not Available	504	Open in IMG/M
3300025919\|Ga0207657_11323206	Not Available	544	Open in IMG/M
3300025920\|Ga0207649_10294201	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300025961\|Ga0207712_10919745	Not Available	774	Open in IMG/M
3300026551\|Ga0209648_10030486	All Organisms → cellular organisms → Bacteria → Acidobacteria	4711	Open in IMG/M
3300027812\|Ga0209656_10327691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300027853\|Ga0209274_10215433	Not Available	979	Open in IMG/M
3300027879\|Ga0209169_10367412	Not Available	757	Open in IMG/M
3300027884\|Ga0209275_10015836	All Organisms → cellular organisms → Bacteria → Acidobacteria	3306	Open in IMG/M
3300027908\|Ga0209006_10015353	All Organisms → cellular organisms → Bacteria	6933	Open in IMG/M
3300028090\|Ga0255349_1021746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1525	Open in IMG/M
3300028379\|Ga0268266_10086160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2746	Open in IMG/M
3300028560\|Ga0302144_10003026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5744	Open in IMG/M
3300028759\|Ga0302224_10223215	Not Available	749	Open in IMG/M
3300028863\|Ga0302218_10006133	All Organisms → cellular organisms → Bacteria	3951	Open in IMG/M
3300029911\|Ga0311361_10079320	All Organisms → cellular organisms → Bacteria	4876	Open in IMG/M
3300029911\|Ga0311361_11187831	Not Available	612	Open in IMG/M
3300029911\|Ga0311361_11206929	Not Available	604	Open in IMG/M
3300029914\|Ga0311359_11151880	Not Available	511	Open in IMG/M
3300029943\|Ga0311340_11581413	Not Available	510	Open in IMG/M
3300029953\|Ga0311343_10224836	Not Available	1913	Open in IMG/M
3300029999\|Ga0311339_11581234	Not Available	580	Open in IMG/M
3300030042\|Ga0302300_1180671	Not Available	597	Open in IMG/M
3300030049\|Ga0302191_10085774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1292	Open in IMG/M
3300030503\|Ga0311370_11550959	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300030693\|Ga0302313_10266520	Not Available	685	Open in IMG/M
3300030906\|Ga0302314_10594529	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300031525\|Ga0302326_12517566	Not Available	645	Open in IMG/M
3300031545\|Ga0318541_10572526	Not Available	632	Open in IMG/M
3300031564\|Ga0318573_10059389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1887	Open in IMG/M
3300031681\|Ga0318572_10000632	All Organisms → cellular organisms → Bacteria	13350	Open in IMG/M
3300031708\|Ga0310686_101245810	Not Available	1040	Open in IMG/M
3300031708\|Ga0310686_108663993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	979	Open in IMG/M
3300031708\|Ga0310686_110749212	Not Available	5155	Open in IMG/M
3300031708\|Ga0310686_111692823	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300031718\|Ga0307474_10275294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	1293	Open in IMG/M
3300031753\|Ga0307477_10001741	All Organisms → cellular organisms → Bacteria	17652	Open in IMG/M
3300031754\|Ga0307475_10589597	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300031819\|Ga0318568_10001933	All Organisms → cellular organisms → Bacteria → Acidobacteria	9359	Open in IMG/M
3300032160\|Ga0311301_11890673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	704	Open in IMG/M
3300032180\|Ga0307471_100483926	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300032261\|Ga0306920_102586698	Not Available	696	Open in IMG/M
3300032898\|Ga0335072_10195286	Not Available	2408	Open in IMG/M
3300032898\|Ga0335072_11391231	Not Available	607	Open in IMG/M
3300033134\|Ga0335073_10147323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2986	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.70%
Host-Associated	Host-Associated	9.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.09%
Aquatic	Environmental → Aquatic	18.60%
Plants	Host-Associated → Plants	9.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.36%
Peat	Environmental → Terrestrial → Peat	14.73%
Freshwater	Environmental → Aquatic → Freshwater	13.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.20%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Marine	Environmental → Aquatic → Marine	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.95%
Loam	Environmental → Terrestrial → Soil → Loam	9.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.53%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.33%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.30%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.43%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.33%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.55%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886015	Grass soil microbial communities from Rothamsted Park, UK - FO (Mercury 0.02g/kg) assembled	Environmental	Open in IMG/M
3300000318	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L1 Cattail	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FOassembled-_0002.00003440	2162886015	Grass Soil	MVIQTNPEVFSGRLPVHTVTSIDRSRGIVTLSGSDGTSLNVLLNSWGTIEATQPVIGTRVQLLEND
WSSedL1CaDRAFT_100078423	3300000318	Wetland	MIIQTNPQAFSNRLPVHTVTSIDRSRGIVTLSGSDGTSLDVALNSWGHLEVTQPGIGTKVQLLPDQH*
Ga0062389_1013954662	3300004092	Bog Forest Soil	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKVQLLDDNDKPGV*
Ga0062593_1000429931	3300004114	Soil	MIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLPDK*
Ga0062589_1003780612	3300004156	Soil	MLKSAQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLPDK*
Ga0062592_1000491453	3300004480	Soil	QTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLPDK*
Ga0062388_1021381502	3300004635	Bog Forest Soil	MIIQTNPEMFYRNRPVHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKVQLLDDNDKPGV*
Ga0070690_1014500631	3300005330	Switchgrass Rhizosphere	VFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLPDK*
Ga0070732_100075485	3300005542	Surface Soil	MIIQTNPEMFSRVFPVHTVTEINRATGIVSLSGSDGSTHQARLDSWGPWEETQPIVGSKVQLLPDEQ*
Ga0068855_1006388682	3300005563	Corn Rhizosphere	MIIRTNPEVFSTRLPVHSVTKLDRTRGIVTLVGTGGTSLTVRVDSWGHLEATQPVIGSKVQLLEEKS*
Ga0070761_100162733	3300005591	Soil	MIIQTDPEMFSRVLPVHTVTHIDRAKGVVTLSGSDGSSLDVRLDSWGPLEVTQPVIGSKVQLLPEK*
Ga0070762_101938082	3300005602	Soil	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKVQLLDDDDKPGV*
Ga0068859_1010454431	3300005617	Switchgrass Rhizosphere	MSRRVYDIGDVKIWMIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRL
Ga0070764_105270892	3300005712	Soil	MIIQTNPEMFARVLPVHTVTHIDRSTGIVTLSGSDGSSLDVRLDSWGNMEETQPVIGCKVQLLEE*
Ga0068863_1022682192	3300005841	Switchgrass Rhizosphere	RLSGSIELEEQLAGRIHHMVIQTNPETFSKRLPIHTVTFVDRTQGVVTLSGSDGTSLNVRLESWGNIEAAQPVVGSKVQLLESH*
Ga0070766_103962481	3300005921	Soil	MIIQTNPEMFSRVLPVHTVTHIDRSTGVVTLNGSDGSSLDVRLDSWGNMEETQPVIGSKVQLLDE*
Ga0075029_1006043422	3300006052	Watersheds	MTIQTNPEMFSPRLPIHTVTHIDRTAGIVTLRGSDASSHQEPLASWGPFDACHPAVGSKVQLLP*
Ga0070712_1002358303	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTIQTNPDVFSRVLPVHTVTNIDRSTGIVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLDE*
Ga0079221_100254892	3300006804	Agricultural Soil	MTIQTNPEMFSSKFPVYKVTHIDHAQGIVTLSGSDGSSRQARLDSWGPYKEAQPVIGSQVQLLP*
Ga0079220_103159623	3300006806	Agricultural Soil	MIIQTNPEMFSSKFPVYKVTHIDHAQGIVTLSGSDGSSQQVRLDSWGPYKEAQPVIGSQVQLLP*
Ga0073928_100202646	3300006893	Iron-Sulfur Acid Spring	MTIQTNPEMFKKSLPVHTVTNIDRAAGIVTLSGSDGSSHQVRLDSWGPFIETQPLVGSQVQLLP*
Ga0102924_100358014	3300007982	Iron-Sulfur Acid Spring	MIIQTNPDVFSGVLPVHTVTQIDRSAGIVTLSGSDGSSLDVRLDSWGNMEETQPVTGSKVQLLPDE*
Ga0099829_109801982	3300009038	Vadose Zone Soil	MTIQTNPEMFSSKFPVYKVTHIDHAQGIVTLSGSDGSSQQVRLDSWGPYKEAQPVIGSQVQLLP*
Ga0099830_109689662	3300009088	Vadose Zone Soil	MFSSKFPVYTVTHIDHAQGIVTLNGSDGSSQQVRLDSWGPYKDTQPVVGSKVQLLP*
Ga0099827_112126181	3300009090	Vadose Zone Soil	MTIQTNPQMFSPKLPVHTVTHIDRAAGIVTLSGSDGSSQQVRLDSWGTFEEAQPLVGSKVQLL
Ga0105241_107375772	3300009174	Corn Rhizosphere	MIIQTNPEVFSGRLPVHTVINIDRSRGIVTLKGSDGTQLDVRLDSWGPSEVTQPVIGSKVQLLEK*
Ga0116105_10018292	3300009624	Peatland	MIIQTNPDVFSRVLPVHTVTHIDRSKGIVTLSGSDGSSLDVRLDSWGPSEVYQPVIGSKVQLLPDK*
Ga0116117_10017631	3300009635	Peatland	QTNPEMFSRILPVHTVTHIDRSKGIVTLSGSDGSSLDVRLDSWGPLEVTQPVIGGKVQLLPDDLK*
Ga0116113_11843631	3300009638	Peatland	MIIQTNPEMFSRILPVHTVTHIDRSKGIVTLSGSDGSSLDVRLDSWGPLEVTQPVIGGKVQLLPDDLK*
Ga0116101_10080801	3300009759	Peatland	MIIQTNPDVFSRVLPVHTVTHIDRSKGIVTLSGSDGSSLDVRLDSWGPSEVYQPVIGSKV
Ga0074046_101532471	3300010339	Bog Forest Soil	MIIQTNPDVFSRVLPVHTVTNIDRSTGIVTLSGSDGSSLDVRLDSWGNMEETQPVVGSKVQLLER*
Ga0074045_100555002	3300010341	Bog Forest Soil	MIIQTNPDVFSRVLPVHTVTNIDRSTGIVTLSGSDGSSLDVRLDSWGNMEETLPVVGSKVQLLER*
Ga0136449_1013202962	3300010379	Peatlands Soil	MIIQTNSEVFSKRLPVHTVTHIDRSTGTVTLSGSDGSSLDARLDSWGNMEETQPIIGSKVQLLEE*
Ga0134126_101091604	3300010396	Terrestrial Soil	MSRRVYDIGDVKIWMIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIG
Ga0134127_103606141	3300010399	Terrestrial Soil	MIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIG
Ga0137391_101513413	3300011270	Vadose Zone Soil	VIIQTNPEMFSRTLPVHTVTNTDRSTGSVTLSGSDGSSLDVRLDSWGPSEVTQPIIGCKVQLLPDEQ*
Ga0137393_100500162	3300011271	Vadose Zone Soil	MTIQTNPEMFSSRFPVYKVTHIDHAQGIVTLSGSDGSSQQVRLDSWGPYKETQPVVGSQVQLLLRRGWKGVQRNGN*
Ga0137393_115213662	3300011271	Vadose Zone Soil	MIIQTNPDVFSRVLPVHTVTNIDRSTGIVTLIGSDGSSLDVRLDSWGNMEETQPVVGSKVQLLER*
Ga0137388_113096571	3300012189	Vadose Zone Soil	MTIQTNPEMFSSKFPVYKVTHIDHAQGIVTLSGSDGSSQQVRLDSWGPFKEAHPVIGSKVQLLP*
Ga0137363_100572794	3300012202	Vadose Zone Soil	MIIQTNPEMFYRNRPVHTVTNIDRTKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKVQLLDDNDKPGV*
Ga0137379_105281533	3300012209	Vadose Zone Soil	MIIQTNPKAFKRSLTVYTVTDIDRVSGIVTLSGSDGTSPQVALNSWGSSEETQPGIGSQIQLLP
Ga0137378_103352313	3300012210	Vadose Zone Soil	MIIQTNPEMFSRVLPVHTVSNIDRSTGTVTLSGSDGSSLDVRLDSWGPSEVTQPIIGS
Ga0137390_102610642	3300012363	Vadose Zone Soil	MTIQTNPEMFNPRLPVYIVTHIDRASGIVVLSGSDGTSPQVRLDSWGPFIEAHPVVGSKVQLLP*
Ga0137390_109246501	3300012363	Vadose Zone Soil	PEMFSRTLPVHTVTNTDRSTGSVTLSGSDGSSLDVRLDSWGPSEVTQPIIGCKVQLLPDEQ*
Ga0157370_121296592	3300013104	Corn Rhizosphere	MSIQTKPEVFSNRRPGHSVTNIERSKGIVTLSATDGTSLSVRLDSWGPLETTQPVIGSKVQLLEEKP*
Ga0181518_102431652	3300014156	Bog	KFNFRRDSMIILTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKVQLLDDDDKPGV*
Ga0163163_133066221	3300014325	Switchgrass Rhizosphere	MIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLP
Ga0182013_100195507	3300014492	Bog	MIIQTNPEVFSNRLPVHTVTNIDRSIGIVTLSGSDGTSLDVRLDSWGPSEVTQPVVGSKVRLLEK*
Ga0182015_109119341	3300014495	Palsa	MIIQTNPKMFKSSLPVYTVTNIDRTAGIVTLRGSDGSQQKVRLDSWGPFVEAHPMVGSQVQLLD*
Ga0182024_1007452610	3300014501	Permafrost	MVIQTNPKMFKASLPVYTVANIDRTAGIVTLRGSDGSSQQVRLDSWGPFAEAQPLVGSEVQLLD*
Ga0182024_101643101	3300014501	Permafrost	MIIHTNPEMFSSVLPVHTVTRIDRSTGIVTLSGSDGSSLDVRLDSWGNMEETQPIIGSKVQLLEK*
Ga0182024_101720093	3300014501	Permafrost	MTIQTEPAMFNPNLPVHTVTNIDRAAGIVTLSGSDGSSLQVRLDSWGPFEAAQPVVGSKVQLLP*
Ga0181516_102846681	3300014655	Bog	MIIQTNPEAFSNHLPVHTVTKIDRPGGIVTLSGSDGTSLDVRLDSWGPLEITQPVVGSKVQLRQEK*
Ga0182030_101419193	3300014838	Bog	MIIQTNPEVFSNRLPVHTVTNIDRSIGIVTLSGSDGTSLDVRLDSWGPSEVTQPVVGSKVQLLEK*
Ga0182038_102393363	3300016445	Soil	MAEARKRTISAMIIQTNPEAFTKRLPVHTVIDIGRLSQEVTLSGSDGSSLKVSLKSWGRLEVGHPDIGSKVQLLPENS
Ga0187879_100399174	3300017946	Peatland	MIIQTNPDVFSRVLPVHTVTHIDRSKGIVTLSGSDGSSLDVRLDSWGPSEVYQPVIGSKVQLLPDK
Ga0187879_104355432	3300017946	Peatland	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKLQVLDDDDKPGV
Ga0187847_104024682	3300017948	Peatland	MTIQTDPEMFNKSLPVHTVTGIDRSAGIVTLSGSDGSSHQARPDSWGPFLETQPVVGSQVQLLP
Ga0187804_102365191	3300018006	Freshwater Sediment	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSLLDVRLDSWGHLEVTQPVIGSKVQLLDDDDKP
Ga0187810_100414123	3300018012	Freshwater Sediment	MIIQTNPEMFSRVLPVHTVTNIDRSTGTVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSEVQLLEE
Ga0187855_104420182	3300018038	Peatland	MIIQTNPEMFYRNRPIHTVTNIERSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKLQLLDDDDKPGV
Ga0187855_109159351	3300018038	Peatland	MTIQTDPEMFNKSLPVHTVTGIDRSAGIVTLSGSDGSSHQARPDSWGPFLETQPVVGS
Ga0187858_103806413	3300018057	Peatland	MIIQTKPEMFHRNPPIHTVSNIERSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKLQVLDDDDKPGV
Ga0210407_100074906	3300020579	Soil	MTIQTNPEMFSSKFPVYKVTHIDHAQGIVTLSGSDGSSQQVRLDSWGPFKEAHPVIGSKVQLLP
Ga0210403_102144192	3300020580	Soil	MIIQTKPEMFHRNPPIHTVSNIERSKGVVTLSGSDGSSLDVRLDSWGHLEVTQSVIGSKLQLLDDDDKPGV
Ga0210399_1000022315	3300020581	Soil	MTIQTNPEMFNNSLPVHTVTDIDRTAGIVTLSGSDGSSHQVRLDSWGPFEETQPLVGSKVQLLP
Ga0210399_100417495	3300020581	Soil	MTIQTSPQMFNPSLPVHTVTDIDRAAGIVTLSGSDGSSHQVRLDSWGPFIEAHPVVGSKVQLLP
Ga0210399_105246984	3300020581	Soil	MIIQTNPEMFYRNRPVHTVTNIDRSKGVVTMSGSDGSLLDVRLDSWGHLEVTQPVIGSKVQFLDDNDKPGV
Ga0210401_102762831	3300020583	Soil	MFKASLPVYKVSHIDKAAGIVTLSGSDGSSHQVRLDSWGALEETQPLIGSKVQLLD
Ga0210406_109926881	3300021168	Soil	EVTMTIQTNPEAFSTRLPIHTVTHIDRSKGVVTLSGSDGSSHDVRLDSWGPSEVYQPVVGSKVQLLNE
Ga0210396_102174272	3300021180	Soil	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSGGSSLDVRLDSWGHLEVTQPVIGSKVQLLDDDDKPGV
Ga0210388_106263941	3300021181	Soil	MTIQTNPEVFTRSLPIHNVTNVNRTAGIVTLSGSDGTSYEVPLNLWKPWEEAQPLVGSEVQLLGR
Ga0210383_100920434	3300021407	Soil	PKMFSSKVPVHTVTHIDRAQGIVTLSGSDGSSQQVRLDSWGTSEDTQPLVGSKVQLLD
Ga0210390_111880472	3300021474	Soil	MIIQTNPEMFSRVLPVHTVTHIDRSTGVVTLNGSDGSSLDVRLDSWGNMEETQPVIGSKVQLLDE
Ga0210398_1000208310	3300021477	Soil	MEIQTEPAMFRSSLPVFTVTHIDKGAGIVTLNGSDGTTHQVRLDSWGPWEDTQPLVGSKVQLLG
Ga0210398_100943283	3300021477	Soil	VIIQTNPEMFSRVLPVHTVTKIDRSKGIVTLNGSDGTSHEIRLDSWGNMEATQPIVGSKVQLLKE
Ga0212123_100062055	3300022557	Iron-Sulfur Acid Spring	MIIQTNPDVFSRVLPVHTVTQIDRSAGIVTLSGSDGSSLDVRLDSWGNMEETQPVTGSKVQLLPDE
Ga0212123_100148234	3300022557	Iron-Sulfur Acid Spring	MTIQTNPEMFKKSLPVHTVTNIDRAAGIVTLSGSDGSSHQVRLDSWGPFIETQPLVGSQVQLLP
Ga0224545_10552931	3300022881	Soil	MVIQTNPKMFKASLPVYTVANIDRTAGIVTLRGSDGSSQQVRLDSWGPFAEAQPLVGSEVQLLD
Ga0224558_11198992	3300023090	Soil	MIIQTNPEMFYRNRPIYTVTNIDRSKGVVTLSGSDGSSRDARLDSWGHMEVTQPVIGSKVQLLGDDDKPGV
Ga0208035_10050115	3300025406	Peatland	QTNPDVFSRVLPVHTVTHIDRSKGIVTLSGSDGSSLDVRLDSWGPSEVYQPVIGSKVQLLPDK
Ga0207684_105940042	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIIQTNPDAFSRVLPVHTVTNIDRSTNIVTLSGSDGSSHEVDLLLWGPSEITQPVIGSKVQLLPDEK
Ga0207654_104743342	3300025911	Corn Rhizosphere	MIIQTNPEVFSGRLPVHTVINIDRSRGIVTLKGSDGTQLDVRLDSWGPSEVTQPVIGSKVQLLEK
Ga0207671_101049671	3300025914	Corn Rhizosphere	NLRMIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLPDK
Ga0207660_117178232	3300025917	Corn Rhizosphere	MIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLPDK
Ga0207657_113232061	3300025919	Corn Rhizosphere	MSRRVYDIGDVKIWMIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPII
Ga0207649_102942011	3300025920	Corn Rhizosphere	DVKIWMIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVTQPIIGSKVQLLPDK
Ga0207712_109197452	3300025961	Switchgrass Rhizosphere	MSRRVYDIGDVKIWMIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLD
Ga0209648_100304867	3300026551	Grasslands Soil	MFSSKFPVYTVTHIDHAQGIVTLNGSDGSSQQVRLDSWGPYKDTQPVVGSKVQLLP
Ga0209656_103276912	3300027812	Bog Forest Soil	MIIQTNPDAFSRVLPVHTVTNIDRSTGIVTLSGSDGSSLDVRLDSWGNMEETQPVVGSKVQLLER
Ga0209274_102154332	3300027853	Soil	MIIQTDPEMFSRVLPVHTVTHIDRAKGVVTLSGSDGSSLDVRLDSWGPLEVTQPVIGSKVQLLPEK
Ga0209169_103674122	3300027879	Soil	MIIQTNPEMFARVLPVHTVTHIDRSTGIVTLSGSDGSSLDVRLDSWGNMEETQPVIGCKVQLLEE
Ga0209275_100158364	3300027884	Soil	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKVQLLDDDDKPGV
Ga0209006_100153538	3300027908	Forest Soil	MIIQTNPKMFSSKVPVHTVTHIDRAQGIVTLSGSDGSSQQVRLDSWGTSEDTQPLVGSQVQLLD
Ga0255349_10217462	3300028090	Soil	MIIQTNPEVFSNRLPVHTVTNIDRSIGIVTLSGSDGTSLDVRLDSWGPSEVTQPVVGSKVQLLE
Ga0268266_100861604	3300028379	Switchgrass Rhizosphere	MSRRVYDIGDVKIWMIIQTNPDVFSRSFPVHTVTNIDRSAGVVTLSGSDGSSLDVRLDSWGPSEVT
Ga0302144_100030265	3300028560	Bog	MIIQTNPEVFSNRLPVHTVTNIDRSIGIVTLSGSDGTSLDVRLDSWGPSEVTQPVVGSKVQLLEK
Ga0302224_102232151	3300028759	Palsa	MIIQTNPKMFKSSLPVYTVTNIDRTAGIVTLRGSDGSQQKVRLDSWGPFVEAHPMVGSQVQLLD
Ga0302218_100061333	3300028863	Palsa	MFKASLPVHTVTHIDRTAGIVTLSGSDGSSRQVRLDSWGTLEESHPLLGSKVQLLD
Ga0311361_100793204	3300029911	Bog	MIIQTNPEAFLSRLPVHTVTFIDRSLGIVTLSGSDGTSLNVRLDSWGTMEATQPVIGSRVQLLEND
Ga0311361_111878311	3300029911	Bog	MIIQTNPEVFSNRLPVHTVTNIDRSRGIVTLSGSDGTSLDVPLNSWGPLEVTQPVIGSKVQLL
Ga0311361_112069291	3300029911	Bog	MRIQTNPEVFSNRLPVHTVTNIDRSRGIVTLSGTDGTSLSVRLDSWGPFEATQPVIGSKVQLREEKP
Ga0311359_111518801	3300029914	Bog	MRIQTNPEVFSNRLPVHTVTNIDRSRGIVTLSGTDGTSLSVRLDSWGPFEATQPVIGS
Ga0311340_115814131	3300029943	Palsa	TRLLAHQWERIESKIWAMIIQTNPEVFSNRLPVHTATSIDRSKGVVALRGTDGTSLSVRLDSWGHLEAAQPVIGSRVQLLEKNP
Ga0311343_102248363	3300029953	Bog	RICAMIIQTNPEAFLSRLPVHTVTFIDRSLGIVTLSGSDGTSLNVRLDSWGTMEATQPVIGSRVQLLEND
Ga0311339_115812342	3300029999	Palsa	TNPKMFKSSLPVYTVTNIDRTAGIVTLRGSDGSQQKVRLDSWGPFVEAHPMVGSQVQLLD
Ga0302300_11806712	3300030042	Palsa	NPGMFKASLPVHTVTHIDRTAGIVTLSGSDGSSRQVRLDSWGTLEESHPLLGSKVQLLD
Ga0302191_100857741	3300030049	Bog	MIIQTNPEVFSNRLPVHTVTNIDRSIGIVTLSGSDGTSLDVRLDSWGPSEVTQPVVGSKV
Ga0311370_115509592	3300030503	Palsa	MIIQTNPEVFSNRLPVHTVTNIDRARGIVALSGSDGTSLDVRLDSWGHLEVTQPVIGSKVQLLPDQ
Ga0302313_102665203	3300030693	Palsa	WAMIIQTNPEVFSNRLPVHTATSIDRSKGVVALRGTDGTSLSVRLDSWGHLEAAQPVIGSRVQLLEKNP
Ga0302314_105945291	3300030906	Palsa	MVIQTNPEAFSSRLPVHTVTLIDRSRGTVTLSGSDGTSLNVRLDSWGTMEATQP
Ga0302326_125175661	3300031525	Palsa	MTIQTNPDMFNPKFPVHTVTHIDRDAGVVTLSGSDGSSQQVRLDSWGSFEAAQPVVGSKVQLLP
Ga0318541_105725262	3300031545	Soil	MITIQTNPEMFTRSLPVYTVTDIDRAAGVVTLSGSDGSSQQVRLDSWGPYPEGHPVVGSKVQLLP
Ga0318573_100593892	3300031564	Soil	MLMAEARKRTISAMIIQTNPEAFTKRLPVHTVIDIDRLSQEVTLSGSDGSSLKVSLKSWGRLEVGHPDIGSKVQLLPENS
Ga0318572_1000063221	3300031681	Soil	MAEARKRTISAMIIQTNPEAFTKRLPVHTVIDIDRLSQEVTLSGSDGSSLKVSLKSWGRLEVGHPDIGSKVQLLPENS
Ga0310686_1012458102	3300031708	Soil	MIIQTNPDVFSRVLPVHTVTQIDRSAGIVALSGSDGSSLDVRLDSWGNMEETQPVIGSKVQLLPDK
Ga0310686_1086639932	3300031708	Soil	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKLQLLDDDDKPGV
Ga0310686_1107492127	3300031708	Soil	MTIQTNPQMFGPKVPVHTVTHIDRTTGIVTLSGSDGSSQQVRLDSWGPFEEAQPIVGSKVQLLP
Ga0310686_1116928232	3300031708	Soil	MTIQTNPQMFSPKLPVHTVTHIDRTAGVVTLSGSDGSSQQVRLDSWGLFEEAQPVIGSKVQLLP
Ga0307474_102752941	3300031718	Hardwood Forest Soil	MIIQTNPEMFYRNRPVHTVTNIDRSKGVVTLSGSAGSLLDVRLDSWGHLEVTQPVIGSKVQLLDDNDKPGV
Ga0307477_1000174110	3300031753	Hardwood Forest Soil	VIIQTEPAMFNRSLPVYTVTDIDRRAGIVTLSGSDGSSQQVRLDSWGPWEDTQPLVGSKVQLLD
Ga0307475_105895973	3300031754	Hardwood Forest Soil	MIIQTNPEMFSRVLPVHTVTHIDRSAGVVTLSGSDGSSLDVRLDSWGPSEDTQPVI
Ga0318568_1000193315	3300031819	Soil	MLTISAMIIQTNPEAFTKRLPVHTVIDIDRLSQEVTLSGSDGSSLKVSLKSWGRLEVGHPDIGSKVQLLPENS
Ga0311301_118906731	3300032160	Peatlands Soil	MIIQTNPEMFYRNRPIHTVTNIDRSKGVVTLSGSDGSSLDVRLDSWGHLEVTQPVIGSKVQLLADDDKPGV
Ga0307471_1004839262	3300032180	Hardwood Forest Soil	MIIQTIPETFSNRFPVHTVTNIDRSTGVVTLGGSDGSSLDVRLDSWGPSEVTQPVIGSKVQLLPDK
Ga0306920_1025866981	3300032261	Soil	MIIQTNPEAFSNRLPVHSVTNIDRAAGIVTLSGSDGTSLEVRLDSWGPLEDTQPVIGS
Ga0335072_101952862	3300032898	Soil	MIIQTNPEVFSPRLPVHTVTEINRATGIVTLSGSDGSTNQARLDSWGPWGETQPIVGSKVQLLPDEK
Ga0335072_113912311	3300032898	Soil	VHTTRLQEKDMIKIQTNPEMFSRTYPVYTVTGIDKAAGVVSLSGSDGSSQQVRLDSWGPYSEGHPVVGSKVQLLP
Ga0335073_101473236	3300033134	Soil	MIIQTNPGMFYRNRPIHTVTNIDRSKGVVTLSGSDGSVLDVRLDSWGNLEVTQPVIGSKVQLLDDDDKPGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063932

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences