Metagenome / Metatranscriptome Family F062884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062884
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	68 residues
Representative Sequence	MERDGREIDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAAITLRVLYFGGTRDTRRNRYT
Number of Associated Samples	62
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.39 %
% of genes near scaffold ends (potentially truncated)	26.15 %
% of genes from short scaffolds (< 2000 bps)	73.85 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.385 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (32.308 % of family members)
Environment Ontology (ENVO)	Unclassified (48.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.308 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.17% β-sheet: 0.00% Coil/Unstructured: 45.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF12773	DZR	14.73
PF13545	HTH_Crp_2	9.30
PF09099	Qn_am_d_aIII	4.65
PF13191	AAA_16	3.88
PF12706	Lactamase_B_2	3.88
PF10370	DUF2437	2.33
PF07992	Pyr_redox_2	2.33
PF00724	Oxidored_FMN	2.33
PF13673	Acetyltransf_10	1.55
PF04015	DUF362	1.55
PF04072	LCM	1.55
PF00668	Condensation	0.78
PF13193	AMP-binding_C	0.78
PF13240	zinc_ribbon_2	0.78
PF13649	Methyltransf_25	0.78
PF13683	rve_3	0.78
PF04909	Amidohydro_2	0.78
PF01551	Peptidase_M23	0.78
PF16916	ZT_dimer	0.78
PF00005	ABC_tran	0.78
PF00801	PKD	0.78
PF01227	GTP_cyclohydroI	0.78
PF00211	Guanylate_cyc	0.78
PF02036	SCP2	0.78
PF12837	Fer4_6	0.78
PF00027	cNMP_binding	0.78
PF00583	Acetyltransf_1	0.78
PF13561	adh_short_C2	0.78
PF02604	PhdYeFM_antitox	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	2.33
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	2.33
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	1.55
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.55
COG1020	EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.78
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.78
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
All Organisms	root	All Organisms	34.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
cellular organisms	root	All Organisms → cellular organisms	32.31 %
Viruses	superkingdom	All Organisms → Viruses	2.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
Candidatus Aenigmarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.54 %
unclassified Aenigmarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota	0.77 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
Chloroflexi bacterium RBG_13_53_26	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_53_26	1.54 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.77 %
Dehalogenimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas	0.77 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.77 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
Chloroflexi bacterium RBG_13_53_26	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_53_26	1.54 %
Dehalogenimonas lykanthroporepellens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas lykanthroporepellens	0.77 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.77 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.77 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
Chloroflexi bacterium RBG_13_53_26	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_53_26	1.54 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.77 %
Dehalogenimonas lykanthroporepellens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas lykanthroporepellens	0.77 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.77 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.31 %
Chloroflexi bacterium RBG_13_53_26	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_53_26	1.54 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Dehalogenimonas lykanthroporepellens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas lykanthroporepellens	0.77 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.77 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003852\|Ga0031655_10267061	Not Available	641	Open in IMG/M
3300005216\|Ga0068994_10140892	Not Available	651	Open in IMG/M
3300006224\|Ga0079037_100027797	All Organisms → cellular organisms → Bacteria → Proteobacteria	4127	Open in IMG/M
3300006224\|Ga0079037_100157570	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300006224\|Ga0079037_100277892	Not Available	1543	Open in IMG/M
3300006224\|Ga0079037_100415165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1277	Open in IMG/M
3300006224\|Ga0079037_101008615	Not Available	824	Open in IMG/M
3300006224\|Ga0079037_102050319	Not Available	572	Open in IMG/M
3300009009\|Ga0105105_10017044	All Organisms → cellular organisms → Bacteria	3002	Open in IMG/M
3300009037\|Ga0105093_10001642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8634	Open in IMG/M
3300009037\|Ga0105093_10001642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8634	Open in IMG/M
3300009037\|Ga0105093_10062614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_53_26	1716	Open in IMG/M
3300009037\|Ga0105093_10856323	Not Available	532	Open in IMG/M
3300009053\|Ga0105095_10013149	All Organisms → cellular organisms → Bacteria	4455	Open in IMG/M
3300009053\|Ga0105095_10083923	Not Available	1722	Open in IMG/M
3300009053\|Ga0105095_10094607	Not Available	1618	Open in IMG/M
3300009078\|Ga0105106_10003371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11422	Open in IMG/M
3300009078\|Ga0105106_10011149	Not Available	6530	Open in IMG/M
3300009078\|Ga0105106_10218799	Not Available	1388	Open in IMG/M
3300009081\|Ga0105098_10246511	Not Available	841	Open in IMG/M
3300009082\|Ga0105099_10001551	All Organisms → cellular organisms → Bacteria	14272	Open in IMG/M
3300009082\|Ga0105099_10444378	Not Available	779	Open in IMG/M
3300009082\|Ga0105099_10648133	Not Available	651	Open in IMG/M
3300009085\|Ga0105103_10346802	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300009091\|Ga0102851_10031852	All Organisms → cellular organisms → Bacteria	4044	Open in IMG/M
3300009091\|Ga0102851_10672664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1092	Open in IMG/M
3300009091\|Ga0102851_13001582	Not Available	542	Open in IMG/M
3300009111\|Ga0115026_10219558	Not Available	1282	Open in IMG/M
3300009111\|Ga0115026_10604081	Not Available	833	Open in IMG/M
3300009111\|Ga0115026_10752804	Not Available	757	Open in IMG/M
3300009111\|Ga0115026_11059567	Not Available	652	Open in IMG/M
3300009153\|Ga0105094_10037999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2650	Open in IMG/M
3300009153\|Ga0105094_10063791	Not Available	2050	Open in IMG/M
3300009153\|Ga0105094_10435481	Not Available	760	Open in IMG/M
3300009166\|Ga0105100_10790677	Not Available	588	Open in IMG/M
3300009167\|Ga0113563_10193192	Not Available	2014	Open in IMG/M
3300009167\|Ga0113563_12122800	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	673	Open in IMG/M
3300009167\|Ga0113563_13348569	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009171\|Ga0105101_10101128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1399	Open in IMG/M
3300009179\|Ga0115028_10758591	Not Available	749	Open in IMG/M
3300009504\|Ga0114946_10049567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_53_26	2408	Open in IMG/M
3300010317\|Ga0116197_1029561	Not Available	1233	Open in IMG/M
3300019234\|Ga0172288_1248455	Not Available	562	Open in IMG/M
3300019246\|Ga0172287_1378947	Not Available	549	Open in IMG/M
3300022550\|Ga0212127_10180599	Not Available	630	Open in IMG/M
3300024056\|Ga0124853_1326329	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300027713\|Ga0209286_1007146	All Organisms → cellular organisms → Bacteria	3873	Open in IMG/M
3300027713\|Ga0209286_1022831	Not Available	2304	Open in IMG/M
3300027723\|Ga0209703_1038901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas lykanthroporepellens	1848	Open in IMG/M
3300027723\|Ga0209703_1088788	Not Available	1191	Open in IMG/M
3300027726\|Ga0209285_10052464	Not Available	1209	Open in IMG/M
3300027731\|Ga0209592_1152516	Not Available	828	Open in IMG/M
3300027731\|Ga0209592_1171569	Not Available	771	Open in IMG/M
3300027792\|Ga0209287_10231498	Not Available	706	Open in IMG/M
3300027877\|Ga0209293_10176598	Not Available	1034	Open in IMG/M
3300027896\|Ga0209777_10029486	All Organisms → cellular organisms → Bacteria	5244	Open in IMG/M
3300027896\|Ga0209777_10522233	Not Available	872	Open in IMG/M
3300027896\|Ga0209777_10549559	Not Available	844	Open in IMG/M
3300027900\|Ga0209253_10077052	Not Available	2746	Open in IMG/M
3300027972\|Ga0209079_10179330	Not Available	725	Open in IMG/M
3300027979\|Ga0209705_10089640	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300031707\|Ga0315291_10002821	All Organisms → cellular organisms → Bacteria	22597	Open in IMG/M
3300031707\|Ga0315291_10004648	Not Available	17416	Open in IMG/M
3300031707\|Ga0315291_10412577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1280	Open in IMG/M
3300031834\|Ga0315290_10387463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1225	Open in IMG/M
3300031862\|Ga0315280_10000409	All Organisms → cellular organisms → Bacteria	79654	Open in IMG/M
3300031999\|Ga0315274_12119278	Not Available	500	Open in IMG/M
3300032046\|Ga0315289_10671840	Not Available	946	Open in IMG/M
3300032046\|Ga0315289_10748607	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300032143\|Ga0315292_10046273	All Organisms → cellular organisms → Bacteria	3197	Open in IMG/M
3300032143\|Ga0315292_10084071	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300032143\|Ga0315292_10352264	Not Available	1232	Open in IMG/M
3300032143\|Ga0315292_10459706	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300032143\|Ga0315292_10628155	Not Available	904	Open in IMG/M
3300032143\|Ga0315292_11236630	Not Available	613	Open in IMG/M
3300032143\|Ga0315292_11654281	Not Available	515	Open in IMG/M
3300032164\|Ga0315283_10378161	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300032164\|Ga0315283_10400775	Not Available	1492	Open in IMG/M
3300032164\|Ga0315283_10982212	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300032173\|Ga0315268_11198179	Not Available	769	Open in IMG/M
3300032173\|Ga0315268_11221274	Not Available	761	Open in IMG/M
3300032177\|Ga0315276_12090873	Not Available	576	Open in IMG/M
3300032397\|Ga0315287_10551914	Not Available	1367	Open in IMG/M
3300032401\|Ga0315275_10864192	Not Available	1000	Open in IMG/M
3300032516\|Ga0315273_10306817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2154	Open in IMG/M
3300032516\|Ga0315273_10602705	Not Available	1457	Open in IMG/M
3300032516\|Ga0315273_11878951	Not Available	717	Open in IMG/M
3300033414\|Ga0316619_10063853	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300033414\|Ga0316619_10110754	Not Available	1788	Open in IMG/M
3300033414\|Ga0316619_10299006	All Organisms → Viruses → Predicted Viral	1226	Open in IMG/M
3300033414\|Ga0316619_11594092	Not Available	587	Open in IMG/M
3300033416\|Ga0316622_100064091	All Organisms → cellular organisms → Bacteria → Acidobacteria	3524	Open in IMG/M
3300033416\|Ga0316622_101785531	Not Available	716	Open in IMG/M
3300033416\|Ga0316622_102078852	Not Available	659	Open in IMG/M
3300033416\|Ga0316622_102554717	Not Available	588	Open in IMG/M
3300033416\|Ga0316622_102805962	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300033416\|Ga0316622_102883848	Not Available	550	Open in IMG/M
3300033419\|Ga0316601_102001608	Not Available	584	Open in IMG/M
3300033434\|Ga0316613_11114319	Not Available	544	Open in IMG/M
3300033480\|Ga0316620_11052407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	793	Open in IMG/M
3300033480\|Ga0316620_12241714	Not Available	543	Open in IMG/M
3300033480\|Ga0316620_12309147	Not Available	535	Open in IMG/M
3300033480\|Ga0316620_12379328	Not Available	527	Open in IMG/M
3300033481\|Ga0316600_10782392	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300033485\|Ga0316626_11928596	Not Available	535	Open in IMG/M
3300033486\|Ga0316624_10015675	All Organisms → cellular organisms → Bacteria	4081	Open in IMG/M
3300033486\|Ga0316624_10047338	Not Available	2719	Open in IMG/M
3300033486\|Ga0316624_11357345	Not Available	650	Open in IMG/M
3300033486\|Ga0316624_11385350	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	644	Open in IMG/M
3300033486\|Ga0316624_12052490	Not Available	531	Open in IMG/M
3300033487\|Ga0316630_10171815	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300033487\|Ga0316630_11613902	Not Available	588	Open in IMG/M
3300033488\|Ga0316621_10873197	Not Available	663	Open in IMG/M
3300033489\|Ga0299912_10224775	All Organisms → Viruses → Predicted Viral	1604	Open in IMG/M
3300033493\|Ga0316631_10089813	Not Available	1069	Open in IMG/M
3300033493\|Ga0316631_10110124	Not Available	984	Open in IMG/M
3300033513\|Ga0316628_100915773	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300033513\|Ga0316628_101600414	Not Available	868	Open in IMG/M
3300033513\|Ga0316628_102063457	Not Available	757	Open in IMG/M
3300033513\|Ga0316628_102621111	Not Available	665	Open in IMG/M
3300033513\|Ga0316628_103025302	Not Available	614	Open in IMG/M
3300033513\|Ga0316628_103247438	Not Available	591	Open in IMG/M
3300033521\|Ga0316616_100480611	Not Available	1414	Open in IMG/M
3300033557\|Ga0316617_102226036	Not Available	566	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	66.92%
Terrestrial	Environmental → Terrestrial	33.08%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	64.62%
Soil	Environmental → Terrestrial → Soil	33.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.54%
Marine	Environmental → Aquatic → Marine	0.77%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	30.77%
Lake	Environmental → Aquatic → Freshwater → Lake	20.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.54%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	32.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	30.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	20.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.00%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.85%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.54%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	32.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	23.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	20.00%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.00%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	6.15%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.85%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Sediment	1.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300005216	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300010317	Hot spring sediment microbial communities from Zodletone spring, Oklahoma to study Microbial Dark Matter (Phase II) - Zodletone Spring source 2m metaG	Environmental	Open in IMG/M
3300019234	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019246	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022550	Zodletone_combined assembly	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031655_102670612	3300003852	Freshwater Lake Sediment	MERDGREIDALTIFVMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAGISLRTLFFGGTRNEHHNRYY*
Ga0068994_101408922	3300005216	Natural And Restored Wetlands	MEREGREVDALSIFLMGLGVLLLVLGPCAGLYGIAMGFVALVGCWVVAITLRVFYFGGSRDDRRSRYV*
Ga0079037_1000277972	3300006224	Freshwater Wetlands	MEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITLRVLYFGGTRDTRRNRYT*
Ga0079037_1001575702	3300006224	Freshwater Wetlands	MERDGREIDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAAITLRVLYFGGTRDTRRNRYT*
Ga0079037_1002778922	3300006224	Freshwater Wetlands	MERDGRGIDALSIFLMGLGVFLLVLGPCTDFYSIAIGLVAGVGCWVLAITLRVFYFGGNSEDHRYRYS*
Ga0079037_1004151652	3300006224	Freshwater Wetlands	MERDGREMDALSIFLMGLGVLLLILGPCAGFYSIAIGFVALVSCWVVAITLRVLCFGGNRDERHSRYY*
Ga0079037_1010086152	3300006224	Freshwater Wetlands	METDGREMNALTIFLMGLGILLFVLGPCTGFYSAGIGLVALVACWVLAVTLRVFYFGGNRDESRYRYS*
Ga0079037_1020503191	3300006224	Freshwater Wetlands	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSVAIGLVALVACWVLAITLRVFYFGGNCEDRRYRYS*
Ga0105105_100170441	3300009009	Freshwater Sediment	MERDGRETDALTIFLMGLGVLLLILGPCAGFYSIAIGFVALVGCWVVAITLKVLYSGGTRDARYSRYY*
Ga0105093_100016425	3300009037	Freshwater Sediment	MEPENRRRCEMERDGREMDALTIFLIGLGVLLLVLGPCAGFYSIAIGFVALVGCWVVAITLRVLYFGGTRDTRRKRYA*
Ga0105093_100016427	3300009037	Freshwater Sediment	MERDGRETDALTIFLMGLGVLLLILGPCAGFCSIAIGFVALVGCWVVAITLKVLYSGGTRDARYSRYY*
Ga0105093_100626143	3300009037	Freshwater Sediment	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAIGLVALVACWVLAVTLRVFYFGGNREDRRYRYSY*
Ga0105093_108563231	3300009037	Freshwater Sediment	ALSIFMMGLGIFLLILGPCAGFYSIAIGLVGLVACWVLAITIRVFYFGGSRDDRPYRFS*
Ga0105095_100131493	3300009053	Freshwater Sediment	MEREEKCAIDALSVFLMGLGVLLLILGPCAGFYSIAMGLVALVACWVVAFTLRVFYFGGTHDTRRSRYY*
Ga0105095_100839231	3300009053	Freshwater Sediment	MERDGREIDALSIFMMGLGIFLLILGPCAGFYSIAIGLVGLVACWVLAITIRVFYFGGSRDERPYRFS*
Ga0105095_100946071	3300009053	Freshwater Sediment	MERDGREIDALTVFLMGLGILLLVLGPCTGFYTVAIGFVTLVGCWVAAITLRVFYLGGTGDEHRNRYV*
Ga0105106_100033716	3300009078	Freshwater Sediment	MEPENRRRCEMERDGREMDALTIFLIGLGVLLLVLGPCAGFYSIPIGFVALVGCWVVAITLRVLYFGGTRDTRRKRYA*
Ga0105106_100111495	3300009078	Freshwater Sediment	MERDGREIDALSIFMMGLGIFLLILGPCAGFYSIAIGLVGLVACWVLAITIRVFYFGGSRDDRPYRFS*
Ga0105106_102187992	3300009078	Freshwater Sediment	MERDGREIDALTVFLMGLGILLLVLGPCTGFYTVAIGFVTLVGCWVAAITLRVFYFGGTGDEHRNRYV*
Ga0105098_102465113	3300009081	Freshwater Sediment	MENRRRCEMERGGREIDALSIFLMGLGVLLLVLGPCAGFYSIAIGLVALVGCWVVASTLRVFFFGGSR
Ga0105099_100015519	3300009082	Freshwater Sediment	MERDGREMDALTIFLIGLGVLLLVLGPCAGFYSIAIGFVALVGCWVVAITLRVLYFGGTRDTRRKRYA*
Ga0105099_104443782	3300009082	Freshwater Sediment	MEPENKRRCEMERDGREIDALTIFLMGLGFLLLVLGPCAGFYSIAIGFVTLVGCWVVAITLRVLYFGGTRDYRRNRYA*
Ga0105099_106481331	3300009082	Freshwater Sediment	EMERDGREIDALSIFMMGLGIFLLILGPCAGFYSIAIGLVGLVACWVLAITIRVFYFGGSRDDRPYRFT*
Ga0105103_103468022	3300009085	Freshwater Sediment	MERGGREIDALSIFLMGLGVLLLVLGPCAGFYSIAIGLVALVGCWVVAITLRVFYFGGSRDDRRNRYV*
Ga0102851_100318522	3300009091	Freshwater Wetlands	MEREGREIDALTIFLMGLGILLLVLGPCAGFYSVAIGFVALVSCWVVAITLRVLYFGSTRDTRRNRYT*
Ga0102851_106726641	3300009091	Freshwater Wetlands	MEPENRRRCEMERDGRDIDALTIFLMGLGFLLLVLGPCAGFYSIAIGFVTLVGCWVVAITLRVLYFGGTRDYRRNRYA*
Ga0102851_130015821	3300009091	Freshwater Wetlands	PLPLKPENRRRCKMERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAMGLVALVACWVLAITLRVFYFGGSRNRYA*
Ga0115026_102195582	3300009111	Wetland	PPPLALELENRRRCEMEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITLRVLYFGSTRDTRRNRYT*
Ga0115026_106040812	3300009111	Wetland	MDALSIFMMGLGVFLLILGPCADFYGIARGLIALVACWVLAITLRVFCFGGPRDTRRYRYS*
Ga0115026_107528041	3300009111	Wetland	MERDGRGIDALSIFLMGLGVFLLVLGPCTDFYSIAIGLVAGVGCWVLAITLRVFYFGGDTEDHRYRYS*
Ga0115026_110595671	3300009111	Wetland	MERDGREIDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAATTFRVLYFGGTRDTRRNRYT*
Ga0105094_100379992	3300009153	Freshwater Sediment	VRKRDGREIDALTIFLMGLGFLLLVLGPCAGFYSIAIGFVTLVGCWVVAITLRVLYFGGTRDYRRNRYA*
Ga0105094_100637913	3300009153	Freshwater Sediment	LTIFLIGLGVLLLVLGPCAGFYSIAIGFVALVGCWVVAITLRVLYFGGTRDTRRKRYA*
Ga0105094_104354811	3300009153	Freshwater Sediment	MERDGRETDALTIFLMGLGVLLLILGPCAGFYSIAIGFVALVGCWVVAITLKVLYS
Ga0105100_107906771	3300009166	Freshwater Sediment	RCEMERDGREMDALSIFLMGLGVLLLILGPCAGFYSIAIGFVALVSCWVVAITLRVLCFGGNRDERHSRYY*
Ga0113563_101931921	3300009167	Freshwater Wetlands	MERDGRGIDALSIFLMGLGVFLLVLGPCTDFYSIAIGLVAGVGCWVLAITLRVFYFGGSRNRYA*
Ga0113563_121228001	3300009167	Freshwater Wetlands	LELENRRRCEMEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITLRVLYFGGTRDTRRNRYT*
Ga0113563_133485691	3300009167	Freshwater Wetlands	REIDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAATTLRVLYFGGTRDTRRNRYT*
Ga0105101_101011281	3300009171	Freshwater Sediment	RDGREIDALTIFLMGLGFLLLVLGPCAGFYSIAIGFVTLVGCWVVAITLRVLYFGGTRDYRRNRYA*
Ga0115028_107585911	3300009179	Wetland	GREIDALSIFMMGLGVFLLILGPCAGFYSIAMGLVALVACWVLAVTIRVFYLGGNRDDRRYRYS*
Ga0114946_100495671	3300009504	Sediment	MDALSIFLMGLGVFLLILGPCAGFYSIAMGLVGMVACWVLAITIRVFYFGGTRDERHSRYY*
Ga0116197_10295611	3300010317	Hot Spring Sediment	MERDGREVDALSIFLMGLGVLLLVLGPCAGLYGIAMGFVALVGCWVVAITLRVFYFGGSRDDRRSRYV*
Ga0172288_12484552	3300019234	Wetland	METDGREMNALTVFLMGLGILFFVLGPCAGLYSAAIGLVALIGCWVVGISLRVFYFGGNREDSRYRYS
Ga0172287_13789471	3300019246	Wetland	CEMERDGREMDALSIFLMGLGVLLLILGPCAGFYSIAIGFVALVSCWVVAITLRVLCFGGNRDERHSRYY
Ga0212127_101805991	3300022550	Hot Spring Sediment	MERDGREVDALSIFLMGLGVLLLVLGPCAGLYGIAMGFVALVGCWVVAITLRVFYFGGSRDDRRSRYV
Ga0124853_13263292	3300024056	Freshwater Wetlands	MERDGRDIDALTIFLMGLGFLLLVLGPCAGFYSIAIGFVTLVGCWVVAITLRVLYFGGTRDYRRNRYA
Ga0209286_10071463	3300027713	Freshwater Sediment	MEREEKCAIDALSVFLMGLGVLLLILGPCAGFYSIAMGLVALVACWVVAFTLRVFYFGGTHDTRRSRYY
Ga0209286_10228311	3300027713	Freshwater Sediment	MERDGREIDALSIFMMGLGIFLLILGPCAGFYSIAIGLVGLVACWVLAITIRVFYFGGSRDDRPYRFS
Ga0209703_10389012	3300027723	Freshwater Sediment	MERDGRETDALTIFLMGLGVLLLILGPCAGFYSIAIGFVALVGCWVVAITLKVLYSGGTRDARYSRYY
Ga0209703_10887882	3300027723	Freshwater Sediment	MERDGREMDALTIFLIGLGVLLLVLGPCAGFYSIAIGFVALVGCWVVAITLRVLYFGGTRDTRRKRYA
Ga0209285_100524641	3300027726	Freshwater Sediment	MERDGRETDALTIFLMGLGVLLLILGPCAGFYSIAIGFVALVGCWVVAITLKVLYSGGTR
Ga0209592_11525162	3300027731	Freshwater Sediment	MERDGREIDALTVFLMGLGILLLVLGPCTGFYTVAIGFVTLVGCWVAAITLRVFYLGGTGDEHRNRYV
Ga0209592_11715692	3300027731	Freshwater Sediment	EKCAIDALSVFLMGLGVLLLILGPCAGFYSIAMGLVALVACWVVAFTLRVFYFGGTHDTRRSRYY
Ga0209287_102314981	3300027792	Freshwater Sediment	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAIGLVALVACWVLAVTLRVFYFGGNREDRRYRYSY
Ga0209293_101765981	3300027877	Wetland	PHWPPPLALELENRRRCEMEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITRRVLYFGSTRDTRRNRYT
Ga0209777_100294864	3300027896	Freshwater Lake Sediment	MERDGREIDALTIFVMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAGISLRTLFFGGTRNEHHNRYY
Ga0209777_105222332	3300027896	Freshwater Lake Sediment	MERAARAIDALSVFMMGLGVFLLLLGPSAGLYNIAVGLLALAACWVMAITFRVLCFGSTRDYHRDRYVW
Ga0209777_105495592	3300027896	Freshwater Lake Sediment	MERDGREIDALTVFLMGLGVFLLILGPCAGFYSIALGFVSIVGCWVVAITLRVLCIGGTRDYHRDRHAW
Ga0209253_100770521	3300027900	Freshwater Lake Sediment	MERDGREMDALSIFMIGLGVFLMILGPCADFYRIKLGLVALVACWGLAITLRVYCFGGPRDTRRYRYS
Ga0209079_101793301	3300027972	Freshwater Sediment	QCHPLDNTSRLTPLPLEMENRRRCEMERGGREIDALSIFLMGLGVLLLVLGPCAGFYSIAIGLVALVGCWVVAITLRVFYFGGSRDDRRNRYV
Ga0209705_100896401	3300027979	Freshwater Sediment	DALSVFLMGLGVLLLILGPCAGFYSIAMGLVALVACWVVAFTLRVFYFGGTHDTRRSRYY
Ga0315291_100028215	3300031707	Sediment	MESEEKCAIDALSVFLMGLGVLLLILGPCAGFYSIAMGVIALVACWVIAVTLRVFYFGGTHEERRSRYY
Ga0315291_1000464811	3300031707	Sediment	MERDGREIDALTVFLIGLGVLLLVLGPCTGFYTIAIGFVILVGCWVAGITLRVFYFGGSRDDRPYRYS
Ga0315291_104125772	3300031707	Sediment	MERDGREIDALTVFLMGLGILLLVLGPCAGFYSIAIGFVALVGCWVAAITLRVFYFGGSRDDRPYRYS
Ga0315290_103874632	3300031834	Sediment	MERDGREMDALSIFLMGLGVFLLILGPCADFYSIARGLIALVACWVLAITLRVFCFGGPRDTRRYRYS
Ga0315280_1000040911	3300031862	Sediment	MERDGREIDALTIFLMGLGVLLLVLGPCAGLYTIAIGFVALVGCWVVAITLRVLYFGGTRDERHGRYY
Ga0315274_121192781	3300031999	Sediment	MERDGRETDALSIFMMGLGIFLLFLGPCAEFYSIAIGFVALVACWVLAITIRVFYFGGSRDDRPYRYS
Ga0315289_106718403	3300032046	Sediment	MERDGREIDALSIFMMGLGIFLLILGPCAGYYSIAIGLVALVACWVVAITLRVFYFGGAREDRRNRYA
Ga0315289_107486072	3300032046	Sediment	MERDGREIDALTVFLMGLGVLLLVLGPCTGFYTIAIGFVLLVGCWVAAITLRVFYFGGTGDEHRNRYA
Ga0315292_100462733	3300032143	Sediment	MEREGRGMDALSIFMIGLGVFLLILGPCADFYSIKLGLVALVACCGLAITLRVYCFGGSRDIRRYRFS
Ga0315292_100840712	3300032143	Sediment	MERDGREMDALSIFMMGLGVFLLILGPCADFYSIARGLIALVACWVLAITLRVFYFGGSRDDRPYRYS
Ga0315292_103522642	3300032143	Sediment	CKMERDGREIDALSIFMMGLGIFLLILGPCAGFYSIAMGLVALVACWVLAITIRVFYFGGSRDDRPYRYS
Ga0315292_104597061	3300032143	Sediment	MERDGREMDALSIFLMGLGVFLLILGPCADFYSIARGLIALVACWVLAITLRVFCFGGPRETRRYRYS
Ga0315292_106281552	3300032143	Sediment	MERDGREMDALSIFMIGLGVFLMILGPCAGFYSIKLGLVALVACWGLAITLRVYCFGGPRDIRRYRFS
Ga0315292_112366301	3300032143	Sediment	MEREGRGMDALSIFMMGMGVFLLILGPCADFYSIKLGLVALVACWGLAITLRVFCFGGLVDSRHFPCSW
Ga0315292_116542811	3300032143	Sediment	MENEERCAIDALSVFLMGLGVLLLILGPCAGLYGIAMGVIALVACWVIAVTLRVFYFGGTHEQRRRRYY
Ga0315283_103781612	3300032164	Sediment	MEREGRGMDALSIFMIGLGVFLLILGPCADFYSIKLGLVALVACCGLAITLRVYCFGGSRDIRRYRYS
Ga0315283_104007752	3300032164	Sediment	MERDGREMNALSIFMMGLGVFLLILGPCADYYSIARGLIALVACWVLAITLRVFYFGGSRDDRPYRYS
Ga0315283_109822122	3300032164	Sediment	MERDGREIDALSIFMMGLGIFLLILGPCAGFYSIAMGLVALVACWVLAITIRVFYFGGSRDDRPYRYS
Ga0315268_111981791	3300032173	Sediment	MERDGREIDALSIFMMGLGILLLVLGPCAGFYSIAIGFVALVGCWVAAVTLRVFYFGGTGDEHRNRYA
Ga0315268_112212741	3300032173	Sediment	MERDGREVDALTVFLMGLGVLLLVLGPCTGFYTIAIGFVPLVAFWVAAITLRVFCFGGTGDDRRYRYP
Ga0315276_120908732	3300032177	Sediment	MERDGREMDALSIFLMGLGVFLLILGPCADFYSIARGLIALVACWVLAITLRVFCFGGPRDDRRYRYS
Ga0315287_105519142	3300032397	Sediment	MERDGREMDALSIFLMGLGVFLLILGPCADFYSIARGLIALVACWVLAITLRVFCFGGPRDTRRYHYS
Ga0315275_108641922	3300032401	Sediment	MERDGREIDALSIFTMGLGIFLLILGPCAGFYSIAIGLVALVACWVLAITLRVFYFGGTSDYHRNRYA
Ga0315273_103068173	3300032516	Sediment	METDGRGMDALSIFMMGLGVFLLILGPCADFYSIARGLIALVACWVLAITLRVFCFGGPRDTRRYRYS
Ga0315273_106027053	3300032516	Sediment	MERDGREIEALSIFMMGLGIFLLILSPCAGYYSIAIGLVALVACWVVAITLRVFYFGGAREDRRNRYA
Ga0315273_118789511	3300032516	Sediment	LELENKRRCKMERDGREIDALSIFMMGLGIFLLILGPCAGFYSIAMGLVALVACWVLAITIRVFYFGGSRDDRPYRYS
Ga0316605_106956011	3300033408	Soil	STSIESENKRRCEMENEERSAVNALSVFLFGLGILLLILGPCAGFYSIAMGLIALVSCWVIAVTIRVFYFGGTRDERQSRYY
Ga0316619_100638532	3300033414	Soil	MEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITLRVLYFGSTRDTRRNRYT
Ga0316619_101107542	3300033414	Soil	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAIGLVALVACWVLAVTIRVFYFDGAHEDRRYRYS
Ga0316619_102990061	3300033414	Soil	MERDGRGIDALSIFLMGLGVFLLVLGPCTDFYSIAIGLVAGVGCWVLAITLRVFYFGGNSEDHRFRYS
Ga0316619_108812262	3300033414	Soil	MENEERSAVNALSVFLFGLGILLLILGPCAGFYSIAMGLIALVSCWVIAVTIRVFYFGGTRDERQSRYY
Ga0316619_115940921	3300033414	Soil	EMERDGREIDALTVFLMGLGVLLLVLGPCADLYSIGMGLVGMVACWVLAISMRVFYFGGNREDRRYRYS
Ga0316622_1000640915	3300033416	Soil	METDGREMNALTVFLMGLGILFFVLGPCAGLYSAAIGLVALIGCWVVGISLRVFYFGGNHEDSRYRYS
Ga0316622_1002217022	3300033416	Soil	MERDGREIDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAATTLRVL
Ga0316622_1012633712	3300033416	Soil	EMENEERSAVNALSVFLFGLGILLLILGPCAGFYSIAMGLIALVSCWVIAVTIRVFYFGGTRDERQSRYY
Ga0316622_1017855311	3300033416	Soil	METDRREVDALTVFLMGVGVLLLVLGPCAGFYNIAIGFVAMVGCWVVAITLRVLYFGGTRETR
Ga0316622_1020788522	3300033416	Soil	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAMGLLALVACWVLTVTIRVFYFGGNRDDRRYRYS
Ga0316622_1025547172	3300033416	Soil	MERDGREMDALTVFLMGLGVLLLVLGPCGGVYGIAIGFVALVGCWVVAITLRVLYFGGTRDDRRYRHS
Ga0316622_1028059621	3300033416	Soil	IDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAAITLRVLYFGGTRDTRRNRY
Ga0316622_1028838482	3300033416	Soil	MEREGREMDALSIFMMGLGVFLLILGPCADFYSIKLGLVALVACWGLAITLRVFCFGGLVDSRHFPCSW
Ga0316601_1020016081	3300033419	Soil	MEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITLRVLYFGGTRDTRRNRYT
Ga0316613_111143191	3300033434	Soil	MERDGRGIDALSIFLMGLGVFLLVLGPCTDFYSIAIGLVAGVGCWVLAITLRVFYFGGDSEDHRYRYS
Ga0316620_110524072	3300033480	Soil	METDGREMNALTIFLMGLGILLFVLGPCTGFYSAGIGLVALVACWVLAVTLRVFYFGGNRDESRYRYS
Ga0316620_122417142	3300033480	Soil	MERDGRETDALSIFLMGLGVFLLVLGPCAGFYSIAMGLVALVACWVLAGTIRVFYLGGN
Ga0316620_123091472	3300033480	Soil	DNTSHSPAGTIGLENKRRCEMERDGREMDALTVFLMGLGVLLLVLGPCTGFYSIAIGFVSLVGCWVVAITLRVLYFGGTQDTRRNRYA
Ga0316620_123793281	3300033480	Soil	MERDGRGMDALSIFMIGLGVFLLILGPCADFYSLKLGLVALVACCGLAITLRVYCFGGPRDDRRYRYS
Ga0316600_107823921	3300033481	Soil	SPHWPPPLALEIENRRRCEMEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITLRVLYFGSTRDTRRNRYT
Ga0316627_1018001001	3300033482	Soil	TSTSIESENKRRCEMENEERSAVNALSVFLFGLGILLLILGPCAGFYSIAMGLIALVSCWVIAVTIRVFYFGGTRDERQSRYY
Ga0316626_119285961	3300033485	Soil	MERDGREIDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAATTLRVLYFGGTRDTRRNRYT
Ga0316624_100156753	3300033486	Soil	MESDGREMDALSIFLMGLGVLLLVLGPCAGFYSIAIGFVALVACWVLAITLRVFYFGGNRDERHTRYY
Ga0316624_100473381	3300033486	Soil	MERDGREMNALTVFLIGLGVLLLVLGPCAGFYSIAVGFVALVGCWVVAITLRVLYFGGTREDRRYRYS
Ga0316624_102948181	3300033486	Soil	MEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITL
Ga0316624_113573451	3300033486	Soil	MERDGRGIDALSIFLMGLGVFVLILGPCASFYSIAMGLVGMVACWVLAVSLRVFYLGGPRDEHRYRYS
Ga0316624_113853502	3300033486	Soil	MERDGRGIDALSIFLMGLGVFLLVLGPCTDFYSIAIGLVAGVGCWVLAITLRVFYFGGNSED
Ga0316624_120524902	3300033486	Soil	RDGREMDALSIFLMGLGVLLLVLGPCAGFYGIAIGFVALVGCWVVAITLRVLYFGGTQDTRRNRYA
Ga0316630_101718153	3300033487	Soil	MERDGRGIDALSIFLMGLGVFLLVLGPCTDFYSIAVGLVAGVGCWVLAITLRVFYFGGDTEDHR
Ga0316630_116139021	3300033487	Soil	SVFLFGLGILLLILGPCAGFYSAAIGFVALVGCWIVAITLRALYFGGNRDERHSRYY
Ga0316621_108731971	3300033488	Soil	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAMGLVALVACWVLAITLRVFYFGGSRDDRPYRYS
Ga0299912_102247752	3300033489	Soil	MEREGREIDALTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVVAITLRVLYFGGTRDTRRNRYT
Ga0316631_100898132	3300033493	Soil	LTIFLMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVAATTLRVLYFGGTRDTRRNRYT
Ga0316631_101101242	3300033493	Soil	MEREGREIDALTIFLMGLGILLLVLGPCAGFYSIAIGFVALVSCWVVAITLRVLYFG
Ga0316628_1009157731	3300033513	Soil	MERDGREIDALTIFVMGLGVLLLVLGPCAGFYSIAIGFVALVGCWVVGISLRTLFFGGTRNEHNNRYY
Ga0316628_1016004142	3300033513	Soil	MERDGREMDALSIFLMGLGVLLLVLGPCTGFYSIAIGFVALVSCWVVAVTLRVLYFGGTHDERHSRYY
Ga0316628_1020634572	3300033513	Soil	RDGREIDALTIFLMGLGVLLLILGPCGGLYSIAIGFVALVACWLVAITLRVLYFGGTRDDRRYRYS
Ga0316628_1026211111	3300033513	Soil	MERDGRGMDALSIFMVGLGVFLLILGPCADFYSIARGLIALVACWVLAITLRVYCFGGPRDMRRYRYS
Ga0316628_1030253021	3300033513	Soil	MERDGREIDALTIFLMGVGVLLLVLGPCAGFYSIAIGFVTLVGCWVVAITLKVLYFRGTRDYRRNRYA
Ga0316628_1032474381	3300033513	Soil	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAMGLVALVACWVLAITLRVFYFGGSRNRYA
Ga0316616_1004806112	3300033521	Soil	ERSAVNALSVFLFGLGILLLILGPCAGFYSIAMGLIALVSCWVIAVTIRVFYFGGTRDERQSRYY
Ga0316617_1022260361	3300033557	Soil	MERDGREIDALSIFMMGLGVFLLILGPCAGFYSIAIGLVALVACWVLAVTLRVFYFGGNREDRRYRYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences