Metagenome Family F062246

Overview

Basic Information

• Family ID: F062246
• Family Type: Metagenome
• Number of Sequences: 131
• Average Sequence Length: 50 residues
• Representative Sequence: MERKLREISGSLVVTIPKQVCDLYGFKNGDMLSIEPIGVGELRLRKIS
• Number of Associated Samples: 65
• Number of Associated Scaffolds: 131

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 19.08 %
• % of genes near scaffold ends (potentially truncated): 11.45 %
• % of genes from short scaffolds (< 2000 bps): 69.47 %
• Associated GOLD sequencing projects: 57
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (49.618 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (19.084 % of family members)
• Environment Ontology (ENVO): Unclassified (34.351 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline) (27.481 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 9.21%
  β-sheet: 25.00%
  Coil/Unstructured: 65.79%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF04014	MazE_antitoxin	6.11
PF16881	LIAS_N	3.05
PF01912	eIF-6	3.05
PF00892	EamA	2.29
PF00589	Phage_integrase	2.29
PF00072	Response_reg	1.53
PF01364	Peptidase_C25	1.53
PF01040	UbiA	1.53
PF00144	Beta-lactamase	1.53
PF00881	Nitroreductase	1.53

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1976	Translation initiation factor 6 (eIF-6)	Translation, ribosomal structure and biogenesis [J]	3.05
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.53
COG1474	Cdc6-related protein, AAA superfamily ATPase	Replication, recombination and repair [L]	1.53
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.53
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.53
COG4720	ECF-type riboflavin transporter, membrane (S) component	Coenzyme transport and metabolism [H]	0.76
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.76
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.76
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.76

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.38 %
Unclassified	root	N/A	49.62 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	49.62 %
Unclassified	root	N/A	49.62 %
Viruses	superkingdom	All Organisms → Viruses	0.76 %

Level 3

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	47.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %
Unclassified	root	N/A	49.62 %

Level 4

Name	Rank	Taxonomy	Distribution
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	15.27 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.76 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → environmental samples	2.29 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	3.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
Unclassified	root	N/A	49.62 %

Level 5

Name	Rank	Taxonomy	Distribution
Candidatus Aenigmarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota	0.76 %
Candidatus Cloacimonetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.76 %
Thermococci	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci	0.76 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	12.21 %
Unclassified	root	N/A	49.62 %
unclassified Candidatus Thermoplasmatota	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → unclassified Candidatus Thermoplasmatota	0.76 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.76 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	2.29 %

Level 6

Name	Rank	Taxonomy	Distribution
Candidatus Thermoplasmatota archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → unclassified Candidatus Thermoplasmatota → Candidatus Thermoplasmatota archaeon	0.76 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.76 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.76 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %
Thermococcales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales	0.76 %
Thermoplasmatales	order	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales	3.05 %
Unclassified	root	N/A	49.62 %
unclassified Aenigmarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota	0.76 %
unclassified Candidatus Cloacimonetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes	0.76 %
unclassified Thermoplasmata	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata	2.29 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	2.29 %

Level 7

Name	Rank	Taxonomy	Distribution
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.76 %
Candidatus Cloacimonetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes → Candidatus Cloacimonetes bacterium	0.76 %
Candidatus Thermoplasmatota archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → unclassified Candidatus Thermoplasmatota → Candidatus Thermoplasmatota archaeon	0.76 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.76 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.76 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %
Thermococcaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae	0.76 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	2.29 %
Unclassified	root	N/A	49.62 %
unclassified Thermoplasmatales	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales	2.29 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	2.29 %

Level 8

Name	Rank	Taxonomy	Distribution
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.76 %
Candidatus Cloacimonetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes → Candidatus Cloacimonetes bacterium	0.76 %
Candidatus Thermoplasmatota archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → unclassified Candidatus Thermoplasmatota → Candidatus Thermoplasmatota archaeon	0.76 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.76 %
Euryarchaeota archaeon RBG_13_31_8	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_13_31_8	0.76 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %
Thermococcus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Thermococcus	0.76 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	2.29 %
Thermoplasmatales archaeon SG8-52-1	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon SG8-52-1	1.53 %
Thermoplasmatales archaeon SG8-52-2	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon SG8-52-2	0.76 %
Unclassified	root	N/A	49.62 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	2.29 %

Associated Scaffolds

Scaffold	Taxonomy	Length
(restricted) 3300022938|Ga0233409_10044267	All Organisms → cellular organisms → Archaea	1282
(restricted) 3300022938|Ga0233409_10099866	All Organisms → cellular organisms → Archaea	916
(restricted) 3300022938|Ga0233409_10173998	Not Available	718
(restricted) 3300022938|Ga0233409_10249726	Not Available	609
(restricted) 3300027856|Ga0255054_10320520	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon SG8-52-1	755
(restricted) 3300027861|Ga0233415_10085955	All Organisms → cellular organisms → Archaea	1367
(restricted) 3300027861|Ga0233415_10661125	Not Available	511
(restricted) 3300027881|Ga0255055_10001906	All Organisms → cellular organisms → Archaea	14900
(restricted) 3300028043|Ga0233417_10031685	All Organisms → Viruses → Predicted Viral	2070
(restricted) 3300028043|Ga0233417_10060106	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	1543

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.76%
Environmental	Environmental	99.24%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.95%
Built Environment	Engineered → Built Environment	0.76%
Terrestrial	Environmental → Terrestrial	2.29%

Category

Habitat	Taxonomy	Distribution
Canal	Engineered → Built Environment → Canal	0.76%
Freshwater	Environmental → Aquatic → Freshwater	11.45%
Marine	Environmental → Aquatic → Marine	70.99%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	9.16%
Sediment	Environmental → Aquatic → Sediment	5.34%
Soil	Environmental → Terrestrial → Soil	2.29%

Type

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	6.87%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	6.87%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	3.82%
Inlet	Environmental → Aquatic → Marine → Inlet	6.11%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.58%
Lake	Environmental → Aquatic → Freshwater → Lake	4.58%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.82%
Microbialites	Environmental → Aquatic → Freshwater → Microbialites	0.76%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.76%
Oceanic	Environmental → Aquatic → Marine → Oceanic	27.48%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	5.34%
Sediment	Environmental → Aquatic → Marine → Sediment	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.76%
Unclassified	Engineered → Built Environment → Canal → Unclassified	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	16.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%

Subtype

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.29%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	27.48%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	16.03%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	6.87%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	6.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.58%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.82%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	3.82%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	3.82%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	2.29%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	6.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Microbialites → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.76%
Unclassified	Engineered → Built Environment → Canal → Unclassified → Unclassified	0.76%

Habitat

Habitat	Taxonomy	Distribution
Aquatic Canal	Engineered → Built Environment → Canal → Unclassified → Unclassified → Aquatic Canal	0.76%
Benthic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic	1.53%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	19.08%
Freshwater Lake	Environmental → Aquatic → Freshwater → Microbialites → Unclassified → Freshwater Lake	0.76%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.82%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	3.82%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.76%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine	0.76%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	15.27%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	8.40%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	6.87%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	6.87%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	0.76%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.76%
Marine Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment	0.76%
Marine Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.53%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	3.05%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.76%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.53%
Salt Pond	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Salt Pond	0.76%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	6.11%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.58%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	2.29%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Sediment	0.76%
Sediment	Environmental → Aquatic → Marine → Unclassified → Unclassified → Sediment	0.76%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.76%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300000122	Marine microbial communities from chronically polluted sediments in Tierra del Fuego - site OR sample ARG 04_12.3m	Environmental
3300000374	Marine sediment microbial community from Union City, CA, USA - Pond 1C Sediment 2	Environmental
3300001533	Benthic freshwater microbial communities from British Columbia, Canada	Environmental
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental
3300001753	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-24_28	Environmental
3300002052	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental
3300002465	Anoxic frehswater biofilm from Lago dell Orsa, Frasassi caves, Italy	Environmental
3300003142	Marine sediment microbial communities from deep subseafloor - Sample from 5.1 mbsf	Environmental
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
TDF_OR_ARG04_123mDRAFT_10038182	3300000122	Marine	MERKLREISGSLVVTIPKQVCDLYGFKDGDMLSIETIGVGELRLRKIL*
P_1C_Sed_2_UnCtyDRAFT_10647282	3300000374	Salt Pond	MYVLHDFKYIFILIVFHMERKLREISGSYVITIPKQVCDLYGYKPNDVFKIEPIGGGELRLRKV*
MLSed_100746623	3300001533	Benthic	MVIHMERKLREISGSYVITIPKQVCDLYNFKPNDKFSIEPIGNGELRLRKVNQ*
MLSed_101189792	3300001533	Benthic	MVIHMERKLREIAGSYVITIPKQVCDLYNFKPNDTFSIEPIGNNELRIRKIQK*
JGI2172J19969_100009462	3300001751	Marine Sediment	MQRKLRMISGSLIVTLPKQICDLYGFKDGDIKDILPICANELRIRKI*
JGI2171J19970_100214632	3300001753	Marine Sediment	MVFYMERKLREISGSLVVTIPKQVCDLYGFRNGDMLNIEPIGVGELRLRKV*
SMTZ1_100098254	3300002052	Marine Sediment	MERKLREINGSLVIQIPKQVCDLYNLRKNDALIIEPIGVGELKLRKVTK*
SMTZ1_100136204	3300002052	Marine Sediment	MQRKLREIAGSLVVTIPKQVCDLYGFKDGDLMEILPIGANELRLRKKAI*
SMTZ23_100596011	3300002053	Marine Sediment	MERKLHEIKGLLKVTLAKQVRDLYNMKISDILVIEPIGVGELRLHKKSL*
LO132_102784691	3300002465	Freshwater Lake	MISLIDRKLRNISGSFVITVLKQVCHFYGFKDGDIMSVEPIG*
Ga0052242_10078983	3300003142	Marine Sediment	MYFHIVFNMERKLREINGSYVITIPKQVCDLYNFKPNDHFSIEPIGNGELRIRKI*
Ga0031656_100656921	3300003858	Freshwater Lake Sediment	MVFYMELKLREINGSLVITIPKQVCDLYNLRKNDVISIEPIGIGELRLRKM*
Ga0055442_102637651	3300004029	Natural And Restored Wetlands	RKLREINGSYVITIPKQVCDLYGFKPNDKFCIEPIGNGELRIRKI*
Ga0073581_10061916	3300005264	Sediment	MVLHMERKLRSISGSLVVTIPKQVCDLYGFNDGDMLNIEPIGVGELRLRKK*
Ga0074649_100625612	3300005613	Saline Water And Sediment	MVFNMERILREINGSYIITIPKQVCDLYGFKPNDMFSIEPIGNSELRLRKLNQ*
Ga0074649_10307262	3300005613	Saline Water And Sediment	MERKLREINGSYIITIPKQVCDLYNFKPNDKFRIEPIDNNELRLRKI*
Ga0074649_10391154	3300005613	Saline Water And Sediment	MCFYMERKLREINGSYIITIPKQVCDLYDFKPNDKFSIEPIGNNELRLRKI*
Ga0074649_11712032	3300005613	Saline Water And Sediment	MERKLREINGSYIITIPKQVCDLYDFKPNDMFSIEPIGNNELRLRKVKS*
Ga0079367_100018737	3300005782	Marine Sediment	MISYMVFDMKRKLREIGGSYVITIPKQVCMLYNFSPGDDISIEPIGVGELRLRKVQ*
Ga0079367_100251413	3300005782	Marine Sediment	MVSNMERKLREINGSLVVTIPKQVCDLYGFRNGDMLSIEPIGVGELRVRKK*
Ga0079367_10685242	3300005782	Marine Sediment	MVFIMKRKLREISGSLIITIPKQVCDLYGFKAGDMLSIEPIGVGELRLRKVTQ*
Ga0078746_10202982	3300005821	Marine Sediment	MFFHMERKLREISGSLVITIPKQVCNLYGFKNGDMLNIEPIGVGELRLRKVS*
Ga0078746_10323591	3300005821	Marine Sediment	MERKLREINGSYIITIPKQVCDLYGFKPNDKFGIEPIGNNELRLRKLNP*
Ga0075125_101411572	3300005935	Saline Lake	MKRKLRNVAGSYVITIPKQVCDLYKFKPNDIFEIEPIGNNELRLKKV*
Ga0111031_11080004	3300007900	Marine Sediment	MESHMERKLREISGSIVITIPKQVCDLYGFKAGDKLSIEPIGVGELRLRKTP*
Ga0115371_100488274	3300008470	Sediment	HMKRKLRNVAGSYVITIPKQVCDLYHFMPNDLFEIEPIGNGELRLTKVNP*
Ga0115371_109210374	3300008470	Sediment	MINHMVFHMERKLREIGGSFVITIPKQVCDLYKFNPGDKISIEPIGVGELRLRKVS*
Ga0115371_109546952	3300008470	Sediment	MKRKLRNVAGSYVITIPKQVCDLYKFKPNDLFEIEPIGNNELRLTKV*
Ga0111034_10307232	3300008517	Marine Sediment	MERKLREISGSLVVTIPKQVCDLYGFKDGDMLSIEPIGVGELRLRKVTQ*
Ga0111034_11979355	3300008517	Marine Sediment	MVSYMVFDMKRKLREIGGSYVITIPKQVCMLYNFSPGDDISIEPIGVGELRLRKVQ*
Ga0115863_12362592	3300009034	Sediment, Intertidal	MEIYMERKLREISGSLVVTIPKQVCDLYNFKDGDMLSIEPIGVGELRLRKIH*
Ga0118736_100131502	3300009135	Marine Sediment	MERKLREISGSLVVTIPKQVCDLYGFKSGDKLSIEPIGVGELRLRKIH*
Ga0118735_101942842	3300009136	Marine Sediment	METRMERKLREISGSIVITIPKQVCDLYNFQLGDRMAIEPIGAAELRLRKVI*
Ga0114921_103403243	3300009150	Deep Subsurface	MESHMERKLREISGSLVVTIPKQVCDLYGFKDGDMLNIEPIGVGELRLRKL*
Ga0114921_104300602	3300009150	Deep Subsurface	MQRKLREISGSLAIPIPKQACDLCNIKKGDWIAIEPIGDGKLRLRKL*
Ga0114921_108552491	3300009150	Deep Subsurface	MERKLREISGSLVVTIPKQVCDLYGFKNGDMLNIEPIGVGELRLRKDS*
Ga0113563_137822831	3300009167	Freshwater Wetlands	MQRKLRMISGSLVVTIPKQVCDLYSFKDGDIIEILPIGANELRLRKIG*
Ga0114930_100355035	3300009499	Deep Subsurface	MERKLREINGSLVVTIPKQVCDLYGFRNGDMLSIEPIGVGELRVRKK*
Ga0114930_103254492	3300009499	Deep Subsurface	MEIHMKRKLREIHGSLVITILKQVCDLYNFKAKDIMAIEPIGVGELRLRKAKD*
Ga0114930_103537581	3300009499	Deep Subsurface	MERKLREISGSLVVTIPRQVCDLYGFKDGDMLNIEPIGVGELRLRKIS*
Ga0114920_100288485	3300009528	Deep Subsurface	MERKLREISGSLVVTIPRQVCDLYGFKDGDMLNIEPIGVGELRLRKV*
Ga0114920_100369506	3300009528	Deep Subsurface	MERKLREISGSLVVTIPKQVCDLYGFKDGDMLNIETRGVGELKIRKYYE*
Ga0114920_106738442	3300009528	Deep Subsurface	MILHMAFHMERKLREIHGSLVITLPKQVCDLYNFHAGDKINIEPFGIGGLRLRKI*
Ga0114919_109936083	3300009529	Deep Subsurface	MERKLREINGSLVVTIPKQICDLYKMKNGDMLEIEPIGTGELRLRKKIL*
Ga0114923_102137202	3300009788	Deep Subsurface	MECKLREISGSLAVTIPRQVCNLYGFKDGDIMSIEPIGVGEL*
Ga0114923_102224512	3300009788	Deep Subsurface	MERKLREISGSLVVTIPKQVCDLYSFKDGDMLSIEPIGVGELRLRKTP*
Ga0136851_100785543	3300010413	Mangrove Sediment	MERKLREISGSYVITIPKQVCDLYGFKSGDKFSIEPIGLGELRLRKL*
Ga0114922_101707623	3300011118	Deep Subsurface	MERKLREINGSYIITIPNQVCDLYGFKPNDTFSIEPIGNNELRLRKLNP*
Ga0114922_102213422	3300011118	Deep Subsurface	MERKLREISGSMVTTISKQICGLYKFKSNDIFFLEPIGIEELKIRKK*
Ga0114922_103236582	3300011118	Deep Subsurface	MKRKLREISGSLIITIPKQVCDLYGFKAGDMLSIEPIGVGELRLRKVTQ*
Ga0114922_105149212	3300011118	Deep Subsurface	MQRKLREINGSYVITIPKQVCDVYDFKPNDTFSIEPIGNNELRLRKLNLP*
Ga0114922_108277302	3300011118	Deep Subsurface	MERKLREINGSHDITIPKQVCDLYDFKPNDKFSIEPIGNSELRLRKLNP*
Ga0114922_114267241	3300011118	Deep Subsurface	MERKLREINGSYVITIPKQVCDLYNFHPGDKMSIEPIGNGELRLHKT*
Ga0120684_10130311	3300013284	Aquatic Canal	MDFSMERKLREINGSYIITIPKQVCDLYGFKPNDTFSIEPIGNNELRLRK
Ga0164321_100595171	3300014903	Marine Sediment	MERKLRDVAGSYIITIPKQVCDLYHFSPNDLFEIEPIGNSELRLRKLNPP*
Ga0164321_103505951	3300014903	Marine Sediment	MNNHMKRKLRDVAGSYVITIPKQVCDLYHFSPNDEFSIEPIGNNELRLRKINSP*
Ga0164321_103980431	3300014903	Marine Sediment	MFFHMERKLREISGSLVVTIPKQVCDLYGFKNGDMLSIEPIGVGELRLRKIL*
Ga0164321_103998642	3300014903	Marine Sediment	MVFNMERKLREINGSYVITIPKQVCDLYGFKPNDTFSIEPIGNSELRLRKLNP*
Ga0164321_104699581	3300014903	Marine Sediment	MERKLREINDSYVITIPKQVCNLYGFKPNDKFSIEPIGNNELKLRKLNP*
Ga0164321_106075371	3300014903	Marine Sediment	MERKLREISGSLVVTIPKQVCDLYGFKNGDMLSIEPIGVGELRLRKIS*
Ga0164321_106461642	3300014903	Marine Sediment	HIVFNMERKLREINGSYIITIPKQVCDLYGFKPNDRFSIEPIGNNELRLRKLNP*
Ga0164310_103529672	3300014913	Marine Sediment	LHMVFYTGRKLREISGSLVVTIPKQVCDLYGFHDGDMLSIEPIGVGELRLRKNQG*
Ga0164311_100692034	3300014914	Marine Sediment	MERRLREIGGSYVITIPKQVCDLYSFKPGDLIEIEPIAIGELRLR
Ga0180432_105211703	3300017989	Hypersaline Lake Sediment	MERKLRQISGSLVVTIPKQVCELYNFRDGDTMQIEPIGVGELRIKKEQK
Ga0180430_109998142	3300018065	Hypersaline Lake Sediment	MERKLREISGSLVITIPKQVCDLYSFKNGDILDIEPIGVGELRLRKKQ
Ga0184631_103599722	3300018070	Groundwater Sediment	MVFYMERKLREINGSLVITIPKQVCDLYNLRKNDIINIEPIGVGELRLRKIQY
Ga0180433_100051627	3300018080	Hypersaline Lake Sediment	MERKLREINGSYIITIPKQICDLYNMKPGDIMSIEPIGIGELRLRKIS
Ga0180433_100255742	3300018080	Hypersaline Lake Sediment	MERKLREINGSYIITIPKQVCDLYDFKPNDKFSIEPIGNSELKLRKIVE
Ga0180433_104629832	3300018080	Hypersaline Lake Sediment	MNNHMERKLREISGSYVITIPKQVCDLYNFKPNDKFSIEPIGNGELRIRKIQ
Ga0224503_102686011	3300022201	Sediment	MERKLREINGIYVITIPKQACELYNFKPNDHFSIEPIGNGELRIRKIYL
(restricted) Ga0233409_100442672	3300022938	Seawater	MERKLREIGGSIVITIPRQVCDLYKFNPGDRISIEPIGNSELRLRKLDPSNHVNEYYH
(restricted) Ga0233409_100998661	3300022938	Seawater	MNNHMKRKLRDVAGSYVITIPKQVCDLYHFSPNDEFSIEPIGNNELRLRKINSP
(restricted) Ga0233409_101739981	3300022938	Seawater	MERKLREIHGSYVITIPKQVCDLYNFHRGDSMSIEPIGNGELRIRKI
(restricted) Ga0233409_102497261	3300022938	Seawater	MDNHMKRKLRDVAGSYVITIPKQVCDLYHFSPNDLFEIEPIGNNELRLRKVTQ
Ga0209978_103342241	3300024263	Deep Subsurface	MERKLREISGSLVVTIPKQVCDLYGFKDGDMLNIEPIGVGELRLRKL
Ga0209976_100244072	3300024265	Deep Subsurface	MYFYMIFHMERKLREISGSLVVTIPKQVCDLYSFKDGDMLSIEPIGVGELRLRKTP
Ga0209976_101320722	3300024265	Deep Subsurface	MECKLREISGSLAVTIPRQVCNLYGFKDGDIMSIEPIGVGEL
Ga0209979_10070925	3300024353	Deep Subsurface	MISYMVFDMKRKLREIGGSYVITIPKQVCMLYNFSPGDDISIEPIGVGELRLRKVQ
Ga0209979_12213512	3300024353	Deep Subsurface	MIFYMERKLREISGSLVVTIPRQVCDLYGFKDGDMLNIEPIGVGELRLRKIS
Ga0209991_100303365	3300024429	Deep Subsurface	MERKLREISGSLVVTIPKQVCDLYGFKDGDMLNIEPIGVGELKIRKYYE
Ga0209991_100365682	3300024429	Deep Subsurface	MERKLREISGSLVVTIPRQVCDLYGFKDGDMLNIEPIGVGELRLRKV
Ga0207997_11291332	3300025736	Saline Lake	MKRKLRNVAGSYVITIPKQVCDLYKFKPNDIFEIEPIGNNELRLKKV
Ga0256868_1000073218	3300027811	Soil	MERKLRLISGSLVVTIPKQVCDLYGFKNGDKISIEPIGVGELRLRKLA
Ga0256868_1000100316	3300027811	Soil	MQRKLRLISGSLVVTIPKQVCDLYSFKDGDIIEILPIGANELRLRKI
Ga0256868_102132712	3300027811	Soil	MGRKLREISGSLVVTIPKQVCDLYAFKNSDKISFEPIGVGELRLRKVI
(restricted) Ga0255054_103205202	3300027856	Seawater	MVFHMERKLREISGSLVVTIPKQVCDLYGFKNGDMLSIEPIGVGELRLRKIL
(restricted) Ga0233415_100859552	3300027861	Seawater	MYIHILIHMERKLREINGSYVITIPKQVCDLYNFKPNDHFSIEPIGNGELRIRKI
(restricted) Ga0233415_106611251	3300027861	Seawater	LREINGSYVITIPKQVCDLYNFKPNDHFSIEPIGNGELRIRKI
(restricted) Ga0255055_1000190612	3300027881	Seawater	MERKLREISGSFVVTIPKQVCDLYGFKAGDKLSIEPIGVGELRLRKIP
Ga0209635_100007667	3300027888	Marine Sediment	MQRKLRMISGSLIVTLPKQICDLYGFKDGDIKDILPICANELRIRKI
Ga0209636_110458202	3300027893	Marine Sediment	ISGSLVVTIPKQICDLYKMKNGDMLEIEPIGIGELRIRKKTQ
Ga0209254_1000899414	3300027897	Freshwater Lake Sediment	MVFYMELKLREINGSLVITIPKQVCDLYNLRKNDVISIEPIGIGELRLRKM
Ga0209253_104589233	3300027900	Freshwater Lake Sediment	IVFHMERKIREINGSMILTLPKQVCDLYNFKAGDRLSIEPIGAGELRIRKVS
Ga0209253_105382892	3300027900	Freshwater Lake Sediment	MQRKLRMISGSLIVTIPKQVCDLYSFKDGDIMEILSIGANELRLRKI
Ga0209253_109051722	3300027900	Freshwater Lake Sediment	HMEGTIREIYGSMILTLPKQVCGLYNFKAGDRLSIEPIGAREL
Ga0209427_102085982	3300027901	Marine Sediment	MQRKLREIAGSLVVTIPKQVCDLYGFKDGDLMEILPIGANELRLRKKAI
Ga0209427_106583372	3300027901	Marine Sediment	MERKLREINGSLVVTIPKQICDLYKMKNGDMMEIEPIGVGELRLKKL
Ga0209427_110663441	3300027901	Marine Sediment	MERKLRKTSGSLVVTIPKQVCDLYGFKVGDKLSIEPIGVGELRLRKK
Ga0209536_1001725972	3300027917	Marine Sediment	MVLYIERKLREISGSLVVTIPRQVCDLYGFKARDRLSIEPIGVGELRLRKI
Ga0209536_1006205101	3300027917	Marine Sediment	MQRKLRMISGSLIVTIPKQICDLYKMQNGDMLEIEPIGVGEPRLRKKIA
(restricted) Ga0233417_100316852	3300028043	Sediment	MKCKLRIISGSLIVTIPKQVHNLYGFKNVNKISIEPIGIGELCLRKAI
(restricted) Ga0233417_100601062	3300028043	Sediment	MQLKLRMISWSLIVTIPRQVCSPYGFKYGDIIEILPIGANELVLRKA
(restricted) Ga0233417_101007492	3300028043	Sediment	MDVYIFIHMERKLRLIAGSLTVSIPKQVCDLYGFKNGDMIKILPIGSNELRLRKI
(restricted) Ga0233417_104347981	3300028043	Sediment	MQRKLRMISGSLIVTIPKQVCDLYGFKDSDIMEILPISANELRLRKIQ
Ga0272443_102313352	3300028883	Marine Sediment	MVLNMERKLREINGSYIITIPKQVCDLYDFKPNDMFSIEPIGNNELRLRKVKS
Ga0272443_103093161	3300028883	Marine Sediment	MERKFREVKVSFVLTIPKQICDLHGFKADNKISIEPIGVGELRFRKLVL
Ga0272443_103304991	3300028883	Marine Sediment	MNFHIVFHMERKLREINGSLVVTIPKQICDLYKMQNGDMLEIEPIGISELRIRKK
Ga0272441_100840534	3300028920	Marine Sediment	MVLNMERKLREINGSYIITIPKQVCDLYGFKPNDKFSIAPIGKNELRLKKIEP
Ga0272441_101141491	3300028920	Marine Sediment	MVFNMERILREINGSYIITIPKQVCDLYGFKPNDMFSIEPIGNSELRLRKLNQ
Ga0272441_101281464	3300028920	Marine Sediment	MERKLREINGSYIITIPKQVCDLYGFKPNDKFSIEPIGNNELRLRKI
Ga0272441_103077341	3300028920	Marine Sediment	MERKLREINGSLVVTIPKQICDLYKMKNGDMLEIEPIGTGELRLRKKMQ
Ga0272441_103161513	3300028920	Marine Sediment	MIHIVTNKEYKLRKINGSYIITIPKQVSDIYGFKQNDKFNVLPIVIDEIWLKKV
Ga0272441_104213992	3300028920	Marine Sediment	MFFNMERKLREINCSYIITIPKQVCDLYGFKPNDKFSIKAIGNNELRLRKLNPP
Ga0272441_107493093	3300028920	Marine Sediment	MDNHMKRKLRDVAGSYVITIPKQVCDLYHFSPNDAFEIEPIGNNELRLRKVMANI
Ga0272441_107573432	3300028920	Marine Sediment	KLHNINGSLVITLPKQICDLYNFQPGDNINIETIGYGELRLKKSPNR
Ga0272441_111670052	3300028920	Marine Sediment	MEHILRKINGSYIITIPKQVCDLYSFKPNDNFNIMPIGNGEIR
Ga0134606_100341143	3300029827	Marine Sediment	MVFYMKRKLREINGSYVITVPKQICDLYDFKAGDKLSIEPIGVGELRLRKIKE
Ga0272442_100352422	3300030616	Marine Sediment	MERKLREINGSYVITIPKQVCDLYNFKPNDRFIIEPIGNNELRLRKMS
Ga0272442_101630412	3300030616	Marine Sediment	MERKLREINGSYIITIPKQVCDLYNFKPNDRFSIEPIGNNELRLRKILY
Ga0272442_101953181	3300030616	Marine Sediment	MERKLREINGSYIITIPKQVCDLYNFKPNDKFSIEPIDNNELRLR
Ga0272442_102015133	3300030616	Marine Sediment	MERKLREINGSYIITIPKQVCDLYDFKPNDMFSIEPIGNNELRLRKISSI
Ga0272442_102641082	3300030616	Marine Sediment	MERKLREINGSYIITIPKQVCDLYDFKPNDKFSIEPIGNGELRLKKIPYRTSIKKPKVKG
Ga0272442_105875551	3300030616	Marine Sediment	MERKLREINGSYIITIPKQVCDLYGFKPNDKFRIEPIGNNELRLRKINPP
Ga0272442_107344131	3300030616	Marine Sediment	MVFCMERKLREIGGSIVITIPRQVCDLYKFNPGDRIGIEPIGNNELRLRKLNP
Ga0272442_107464881	3300030616	Marine Sediment	MERKLREINGSLVVTIPKQICDLYKMKNGDMLEIEPIGTGE
Ga0307441_10145184	3300031276	Salt Marsh	MERKLREINGSYIITIPKQVCDLYGFKTNDTFSIEPIGNNELRLRKLNP
Ga0315550_11229543	3300031653	Salt Marsh Sediment	MERKLREINGSYIITIPNQVCDLYGFKPNDTFSIEPIGNNELRLRKLNP
Ga0315550_11282661	3300031653	Salt Marsh Sediment	MERKLREINGSYIITIPKQVCDLYGFKPNDKFSIEPIGNNELRLRKVIE
Ga0315274_105834101	3300031999	Sediment	MERKLREISGSLVVTIPKQVCNLYGLKDGDMIEILPIGANELRLRKI
Ga0315282_100036978	3300032069	Sediment	MVFYMERKLREISGSLVVTIPKQVCDLYGFKNGDKLSIEPIGVGELRLRKIS
Ga0373573_0141662_106_267	3300034782	Sediment	METHAEGKLRMISGSLIVTIPKQLCDLYKMKDGDMLEIEPIGYGELKIRKKGF