Metagenome / Metatranscriptome Family F061881

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061881
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	75 residues
Representative Sequence	MSLSRDSRQERKLKAIRRAQFRLKQNLERIDFEEDVLLPEIEALKSGKSVLGLPAGAAFDIQIEDENPGQS
Number of Associated Samples	93
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.66 %
% of genes near scaffold ends (potentially truncated)	20.61 %
% of genes from short scaffolds (< 2000 bps)	74.81 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.702 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (21.374 % of family members)
Environment Ontology (ENVO)	Unclassified (41.221 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (38.931 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.38% β-sheet: 0.00% Coil/Unstructured: 61.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF07087	DUF1353	3.05
PF03412	Peptidase_C39	2.29
PF01555	N6_N4_Mtase	1.53
PF05014	Nuc_deoxyrib_tr	1.53
PF07589	PEP-CTERM	1.53
PF13539	Peptidase_M15_4	1.53
PF01464	SLT	0.76
PF13365	Trypsin_2	0.76
PF09588	YqaJ	0.76
PF14359	DUF4406	0.76
PF08241	Methyltransf_11	0.76
PF09594	GT87	0.76
PF12762	DDE_Tnp_IS1595	0.76
PF13560	HTH_31	0.76
PF01381	HTH_3	0.76
PF01973	MptE-like	0.76
PF02945	Endonuclease_7	0.76
PF01569	PAP2	0.76
PF13356	Arm-DNA-bind_3	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.53
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.53
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.53
COG3613	Nucleoside 2-deoxyribosyltransferase	Nucleotide transport and metabolism [F]	1.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
All Organisms	root	All Organisms	31.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
cellular organisms	root	All Organisms → cellular organisms	29.77 %
Viruses	superkingdom	All Organisms → Viruses	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.77 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	13.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.82 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.76 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.76 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	13.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.05 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.76 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	13.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.76 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.76 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.76 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.76 %
Ardenticatenia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	13.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.76 %
Cellvibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae	0.76 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Ardenticatenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales	0.76 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	13.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Candidatus Giovannonibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Giovannonibacteria	0.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.76 %
Cellvibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio	0.76 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.76 %
Staphylococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae	0.76 %
Ardenticatenaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → Ardenticatenaceae	0.76 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	13.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Candidatus Promineofilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → Ardenticatenaceae → Candidatus Promineofilum	0.76 %
Mesorhizobium caraganae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium caraganae	0.76 %
unclassified Cellvibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio → unclassified Cellvibrio	0.76 %
Staphylococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus	0.76 %
Candidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Giovannonibacteria → Candidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b	0.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.76 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	13.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Candidatus Promineofilum breve	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → Ardenticatenaceae → Candidatus Promineofilum → Candidatus Promineofilum breve	0.76 %
Cellvibrio sp. KY-GH-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio → unclassified Cellvibrio → Cellvibrio sp. KY-GH-1	0.76 %
Staphylococcus pettenkoferi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus pettenkoferi	0.76 %
Mesorhizobium caraganae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium caraganae	0.76 %
Candidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Giovannonibacteria → Candidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b	0.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.76 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2105332	Not Available	554	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2110026	Not Available	509	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2110733	Not Available	541	Open in IMG/M
3300001838\|RCM33_1050645	Not Available	520	Open in IMG/M
3300002223\|C687J26845_10123261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	956	Open in IMG/M
3300002460\|C687J35021_10125635	Not Available	1025	Open in IMG/M
3300002460\|C687J35021_10352208	Not Available	547	Open in IMG/M
3300003267\|soilL1_10121013	Not Available	1356	Open in IMG/M
3300003313\|P32013IDBA_1035353	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	1533	Open in IMG/M
3300003324\|soilH2_10285833	Not Available	3150	Open in IMG/M
3300003324\|soilH2_10309150	Not Available	1427	Open in IMG/M
3300003324\|soilH2_10358895	All Organisms → cellular organisms → Bacteria	4860	Open in IMG/M
3300004463\|Ga0063356_103556249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300005332\|Ga0066388_102795058	Not Available	892	Open in IMG/M
3300005341\|Ga0070691_10339243	Not Available	831	Open in IMG/M
3300005343\|Ga0070687_100000106	All Organisms → cellular organisms → Bacteria	28120	Open in IMG/M
3300005406\|Ga0070703_10264246	Not Available	703	Open in IMG/M
3300005406\|Ga0070703_10330159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	645	Open in IMG/M
3300005438\|Ga0070701_10951536	Not Available	596	Open in IMG/M
3300005441\|Ga0070700_100615668	Not Available	853	Open in IMG/M
3300005444\|Ga0070694_100119657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1888	Open in IMG/M
3300005468\|Ga0070707_101241205	Not Available	712	Open in IMG/M
3300005529\|Ga0070741_10153655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Cellvibrio → unclassified Cellvibrio → Cellvibrio sp. KY-GH-1	2308	Open in IMG/M
3300005529\|Ga0070741_11157548	Not Available	655	Open in IMG/M
3300005544\|Ga0070686_100056763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Giovannonibacteria → Candidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b	2512	Open in IMG/M
3300005544\|Ga0070686_100721729	Not Available	797	Open in IMG/M
3300005546\|Ga0070696_100023346	Not Available	4204	Open in IMG/M
3300006358\|Ga0068871_100548072	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1047	Open in IMG/M
3300006755\|Ga0079222_11481842	Not Available	634	Open in IMG/M
3300006804\|Ga0079221_10569327	Not Available	755	Open in IMG/M
3300006845\|Ga0075421_100909436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1004	Open in IMG/M
3300006846\|Ga0075430_100419194	Not Available	1105	Open in IMG/M
3300006847\|Ga0075431_101194068	Not Available	724	Open in IMG/M
3300006853\|Ga0075420_101648371	Not Available	549	Open in IMG/M
3300006876\|Ga0079217_10812874	Not Available	651	Open in IMG/M
3300007004\|Ga0079218_13581993	Not Available	527	Open in IMG/M
3300007734\|Ga0104986_1912	Not Available	45101	Open in IMG/M
3300009147\|Ga0114129_10290106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2184	Open in IMG/M
3300009156\|Ga0111538_10107423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3545	Open in IMG/M
3300009162\|Ga0075423_10400175	Not Available	1441	Open in IMG/M
3300009162\|Ga0075423_11623940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	695	Open in IMG/M
3300009162\|Ga0075423_12309688	Not Available	585	Open in IMG/M
3300009285\|Ga0103680_10000510	All Organisms → cellular organisms → Bacteria	41134	Open in IMG/M
3300009285\|Ga0103680_10015184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5324	Open in IMG/M
3300009285\|Ga0103680_10016656	All Organisms → cellular organisms → Bacteria	4993	Open in IMG/M
3300009597\|Ga0105259_1002417	Not Available	3295	Open in IMG/M
3300009610\|Ga0105340_1084627	Not Available	1261	Open in IMG/M
3300009610\|Ga0105340_1431294	Not Available	588	Open in IMG/M
3300009678\|Ga0105252_10068491	Not Available	1376	Open in IMG/M
3300009678\|Ga0105252_10091108	All Organisms → Viruses → Predicted Viral	1212	Open in IMG/M
3300009678\|Ga0105252_10157519	Not Available	951	Open in IMG/M
3300009678\|Ga0105252_10401299	Not Available	627	Open in IMG/M
3300011400\|Ga0137312_1037019	Not Available	766	Open in IMG/M
3300011415\|Ga0137325_1000147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium caraganae	16067	Open in IMG/M
3300011416\|Ga0137422_1023582	Not Available	1453	Open in IMG/M
3300011421\|Ga0137462_1000192	All Organisms → cellular organisms → Bacteria	8099	Open in IMG/M
3300011430\|Ga0137423_1141831	Not Available	721	Open in IMG/M
3300011431\|Ga0137438_1099618	Not Available	884	Open in IMG/M
3300011432\|Ga0137428_1003365	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5204	Open in IMG/M
3300011435\|Ga0137426_1152029	Not Available	680	Open in IMG/M
3300011437\|Ga0137429_1124359	Not Available	793	Open in IMG/M
3300011439\|Ga0137432_1019023	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1968	Open in IMG/M
3300011439\|Ga0137432_1275676	Not Available	539	Open in IMG/M
3300011440\|Ga0137433_1063364	Not Available	1114	Open in IMG/M
3300011443\|Ga0137457_1126254	Not Available	835	Open in IMG/M
3300011443\|Ga0137457_1180356	Not Available	712	Open in IMG/M
3300011443\|Ga0137457_1245179	Not Available	613	Open in IMG/M
3300012022\|Ga0120191_10018979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	958	Open in IMG/M
3300012160\|Ga0137349_1091143	Not Available	564	Open in IMG/M
3300012210\|Ga0137378_10821790	Not Available	842	Open in IMG/M
3300012357\|Ga0137384_11551582	Not Available	512	Open in IMG/M
3300012530\|Ga0136635_10367658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300014148\|Ga0180010_1029481	Not Available	526	Open in IMG/M
3300014613\|Ga0180008_1036156	Not Available	2002	Open in IMG/M
3300014745\|Ga0157377_10537595	Not Available	823	Open in IMG/M
3300014876\|Ga0180064_1091233	Not Available	641	Open in IMG/M
3300015371\|Ga0132258_12478981	Not Available	1298	Open in IMG/M
3300018082\|Ga0184639_10387504	Not Available	723	Open in IMG/M
3300018083\|Ga0184628_10001270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12558	Open in IMG/M
3300018083\|Ga0184628_10005236	Not Available	6197	Open in IMG/M
3300018083\|Ga0184628_10144159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1238	Open in IMG/M
3300018083\|Ga0184628_10171818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1131	Open in IMG/M
3300018083\|Ga0184628_10286614	Not Available	865	Open in IMG/M
3300018083\|Ga0184628_10496384	Not Available	632	Open in IMG/M
3300018084\|Ga0184629_10503875	Not Available	630	Open in IMG/M
3300018084\|Ga0184629_10707713	Not Available	507	Open in IMG/M
3300019458\|Ga0187892_10002122	All Organisms → cellular organisms → Bacteria	41434	Open in IMG/M
3300019487\|Ga0187893_10022730	Not Available	7643	Open in IMG/M
3300020020\|Ga0193738_1001839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → Ardenticatenaceae → Candidatus Promineofilum → Candidatus Promineofilum breve	8342	Open in IMG/M
3300020020\|Ga0193738_1005238	Not Available	4501	Open in IMG/M
3300020020\|Ga0193738_1014481	Not Available	2532	Open in IMG/M
3300020202\|Ga0196964_10000993	All Organisms → cellular organisms → Bacteria → Proteobacteria	15208	Open in IMG/M
3300020202\|Ga0196964_10003099	All Organisms → cellular organisms → Bacteria → Proteobacteria	7780	Open in IMG/M
3300020202\|Ga0196964_10143603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1077	Open in IMG/M
3300020215\|Ga0196963_10194806	Not Available	875	Open in IMG/M
3300020215\|Ga0196963_10210969	Not Available	842	Open in IMG/M
3300020215\|Ga0196963_10239666	Not Available	790	Open in IMG/M
3300020215\|Ga0196963_10290567	Not Available	719	Open in IMG/M
3300021062\|Ga0196974_1100166	Not Available	503	Open in IMG/M
3300023179\|Ga0214923_10000993	All Organisms → cellular organisms → Bacteria	41358	Open in IMG/M
3300024187\|Ga0247672_1023341	Not Available	991	Open in IMG/M
3300024232\|Ga0247664_1018542	Not Available	1618	Open in IMG/M
3300024283\|Ga0247670_1026352	Not Available	1042	Open in IMG/M
3300024331\|Ga0247668_1094326	Not Available	606	Open in IMG/M
3300025324\|Ga0209640_10552897	Not Available	933	Open in IMG/M
3300025918\|Ga0207662_10003177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8399	Open in IMG/M
3300025922\|Ga0207646_10077294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2975	Open in IMG/M
3300025922\|Ga0207646_10707752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	900	Open in IMG/M
3300026118\|Ga0207675_102324996	Not Available	549	Open in IMG/M
3300027362\|Ga0208320_1002585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus pettenkoferi	2056	Open in IMG/M
3300027533\|Ga0208185_1096933	Not Available	693	Open in IMG/M
3300027533\|Ga0208185_1105219	Not Available	661	Open in IMG/M
3300027573\|Ga0208454_1012671	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2081	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10055657	Not Available	1337	Open in IMG/M
3300027909\|Ga0209382_11153323	Not Available	796	Open in IMG/M
3300028592\|Ga0247822_11286440	Not Available	613	Open in IMG/M
3300028809\|Ga0247824_10703974	Not Available	616	Open in IMG/M
3300031578\|Ga0307376_10063303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2661	Open in IMG/M
3300031787\|Ga0315900_10455780	Not Available	987	Open in IMG/M
3300031854\|Ga0310904_10588862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300031857\|Ga0315909_10025612	All Organisms → cellular organisms → Bacteria	5829	Open in IMG/M
3300031858\|Ga0310892_11390487	Not Available	504	Open in IMG/M
3300031911\|Ga0307412_11713401	Not Available	576	Open in IMG/M
3300032144\|Ga0315910_10859537	Not Available	706	Open in IMG/M
3300032770\|Ga0335085_11006453	Not Available	900	Open in IMG/M
3300033551\|Ga0247830_10462428	Not Available	995	Open in IMG/M
3300033551\|Ga0247830_10620975	Not Available	856	Open in IMG/M
3300033551\|Ga0247830_10738423	Not Available	782	Open in IMG/M
3300033551\|Ga0247830_11096865	Not Available	635	Open in IMG/M
3300033551\|Ga0247830_11369569	Not Available	565	Open in IMG/M
3300034191\|Ga0373909_0326014	Not Available	501	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.02%
Host-Associated	Host-Associated	12.21%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.62%
Aquatic	Environmental → Aquatic	37.40%
Plants	Host-Associated → Plants	12.21%
Bioremediation	Engineered → Bioremediation	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.09%
Sediment	Environmental → Aquatic → Sediment	28.24%
Freshwater	Environmental → Aquatic → Freshwater	9.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.29%
Cave	Environmental → Terrestrial → Cave	1.53%
Roots	Host-Associated → Plants → Roots	0.76%
Metal	Engineered → Bioremediation → Metal	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	28.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.95%
Loam	Environmental → Terrestrial → Soil → Loam	14.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.16%
Sand	Environmental → Terrestrial → Soil → Sand	6.11%
Lake	Environmental → Aquatic → Freshwater → Lake	2.29%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	2.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.53%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.76%
Ice	Environmental → Aquatic → Freshwater → Ice	0.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%
Clay	Environmental → Terrestrial → Soil → Clay	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	28.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.11%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.05%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	3.05%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	2.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.53%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	21.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.87%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	6.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.05%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	3.05%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.53%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.53%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.53%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.76%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.76%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.76%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.76%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.76%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.76%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001838	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2a	Environmental	Open in IMG/M
3300002223	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_1.2	Environmental	Open in IMG/M
3300002460	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank highO2_1.2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003313	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sample	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007734	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Jan	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009285	Microbial communities from groundwater in Rifle, Colorado, USA - 2A_0.1um	Environmental	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300014148	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PW_MetaG	Environmental	Open in IMG/M
3300014613	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PW_MetaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021062	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10-13C	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027362	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034191	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21053322	3300000033	Soil	VSLSRDSRTERKLKAIRMAQHRLRQRLETIDWIEDHLLPEIEALKSGKSVLGLDAGSAFDIRIEPDDHSDPKQ*
ICChiseqgaiiDRAFT_21100261	3300000033	Soil	MSSLSRDSRQERKLKAVRRAQFALKQRLEKIDWEEDELLPEVMALKAGNSVLGLDAGSAFDIRIEPDDHSDPKQ*
ICChiseqgaiiDRAFT_21107331	3300000033	Soil	VSLSRDSRTERKLKAIRMAQHRLRQRLETIDWIEDHLLPEIEALKSGKSVLGLDAGSAFDIRIEPDDHSDPK*
RCM33_10506452	3300001838	Marine Plankton	MSLSRDSRTEKKLKAFLRAKFRLKQQFEYIDYCEDVLIPEVEKLKQGKSVLGLDAGTAFDLVIDDSRPDSPEAQDAE*
C687J26845_101232611	3300002223	Soil	MSLSRDSRQERKLKALRRAQFRLTQRFEYIDWEEDVLIPEVEALKAGRPVFGLTDGRMFEIEIEESHADPDQTPP
C687J35021_101256352	3300002460	Soil	MSLSRDSRQERKLKALRRAQFRLTQRFEYIDWEEDVLIPEVEALKAGRPVFGLTDGRMFEIEIEESHADPDQTPPDHTEPDPGTR*
C687J35021_103522081	3300002460	Soil	MSLSRDSRQERKLKAIRMAQFRLKQRLEAIDFLEDVLMPEIEALKAGKSVLGLPENVAFDIQVITDADPRYPATGESD*
soilL1_101210132	3300003267	Sugarcane Root And Bulk Soil	MSLSRDSRQERKLKALRRAQFRLQQTFQRIDWEEDVLLPEIEALKAGKSVLGLPEGAAFDIQIDHADSDQKSPDGSK*
P32013IDBA_10353532	3300003313	Ore Pile And Mine Drainage Contaminated Soil	VLSRDSRAERKLKAVRRAQFRLKQSLERIDFEEDVLLPEIEALKAGKPVLGLPEGAAFDIQVVADEDPNPRSAISTE*
soilH2_102858334	3300003324	Sugarcane Root And Bulk Soil	VSLSRDSRVERKLKAIRRAEFALKQRLERIDFEEDVLLPEIEALKAGKSVLELPENTAFDIIVEHDADPRSRKTRRAR*
soilH2_103091503	3300003324	Sugarcane Root And Bulk Soil	LPLSRDSRSERKWKLWRRTEFRLKQGLERIDWEEDVLLPEIEAMKAGKAVGELPAGAAFDIKVIEDGSEI*
soilH2_103588954	3300003324	Sugarcane Root And Bulk Soil	VPLSRDSRQIREWKLIRRTQFRLRQGLERIRWEEEELIPEVEALLSGAKSVAGLPAGAAFDIVIEDDAHPDSTPTDPAGE*
Ga0063356_1035562492	3300004463	Arabidopsis Thaliana Rhizosphere	VSLSRDSRAERKLKALRRAQFRLKQNFERIDWEEDELLPEVEALKSGKSVLGLPEGVAFDIQIEHATPDPAKTSDG*
Ga0066388_1027950582	3300005332	Tropical Forest Soil	MSLSRDSRQERKMKALMRAQFRLQQNFDRIDWEEDVLLPEIQNLKAGKSVLGLDAGSAFDLRIEPDDHQGPTQ*
Ga0070691_103392431	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSLSRDSRQERKLKAIRLAQFRLKQRLEAIDWIEDVLQPEIEALKAGKSVLGLPEGAAFDIVIEAEDADPNPATASDTGE*
Ga0070687_10000010628	3300005343	Switchgrass Rhizosphere	MSLSRDSRQERKLKALRRAQFALKQRFERIDFEEDVLMPEVEALKAGKSVLGLEAGTAFDIKVGVE*
Ga0070703_102642461	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MALSRDSRQERKLKAYRRAQFRLQQHLERIDWEEDFLLPELEALKSGKSVLSLPEGAVFDIQIEHEVQADVSPKADG*
Ga0070703_103301591	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSRDSRQERKLKALRRAQFRLQQNFQRIDWEEDVLLPEIEALKAGKSVLGLPEGAAFDIQIEDDADRSQDQNRAE*
Ga0070701_109515361	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VSLSRDSRQERKLKAVRRTMFRLKQNLERIDWEEDVLLPEIEALKAGKSVLGLPDGSAFDIQIVNDANPSHSQTPETD*
Ga0070700_1006156682	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSLSRDSRQERKLKALRWAQFRLKQRLEAIDWQEDVLLPEIEALKAGRSVLGLPEGVAFDIQIESDASPRQDTTEN*
Ga0070694_1001196573	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSRDSRQERKLKAVRRAQFRLKQNLERIDWEEDSLLPEIEALKSGKSVLGLPDGMAFDIVIEHEVQNPSEAAKPDTDA*
Ga0070707_1012412051	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSLSRDSRQERKLKAVRRAQFRLKQNLERIDWEEDSLLPEIEALKSGKSVLGLPDGMAFDIVI
Ga0070741_101536552	3300005529	Surface Soil	MPLSRDSRSERKWKAYRRAEFRLKQALERIDWEEEILMPEIEALKSGKAVAGLPAGAAFDIRIEQE*
Ga0070741_111575483	3300005529	Surface Soil	MPLSRDSRSERKWKAYRRAEFRLKQALERIDWEEETLMPEIEALKSGKAVAGLPAGAAFDIRVEQE*
Ga0070686_1000567631	3300005544	Switchgrass Rhizosphere	MPLSRDSRSERKLKAIRRAEFRLRQNLDRIDWEEEVLMPEIEALKSGKSVLGLPANTAFEIEVVNEVSHPRKARRSK*
Ga0070686_1007217292	3300005544	Switchgrass Rhizosphere	LSLSRDSRQERKLKAFRRAQFALKQRLERIDWEEDKLMPEIEGLKAGRSVLGLPEGTVFDIKIEAE*
Ga0070696_1000233465	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LALSRDSRQERKLKAFRRAQFRLKQSLERIDWEEDVLMPEIEALKGGRSVLGLPEGAAFDITIEQDEVQNPRANEPN*
Ga0068871_1005480722	3300006358	Miscanthus Rhizosphere	VSIARDSRAEKKLKAYRRAQFALKQRFERIDFEEDVLYPEIEALKAGKSVLGLPANSAFDMVVVDGADPVTRQKPSDG*
Ga0079222_114818422	3300006755	Agricultural Soil	SLSRDSRQERKLKALRRAQFRLKQSLERIDWEEDTLLPEIEALKSGKSVLGLPDGAAFDICIEDENHDPAKDTH*
Ga0079221_105693272	3300006804	Agricultural Soil	VLSRDSRQERKLKALRRAQFRLKQSLERIDWEEDTLLPEIEALKSGKSVLGLPEGAAFDICIEDHDPSKDAQ*
Ga0075421_1009094362	3300006845	Populus Rhizosphere	MSLSRDSRQERKLKAIRRAQFRLKQNLERIDFEEDVLLPEIEALKSGKSVLGLPAGAAFDIQIEDENPGQS*
Ga0075430_1004191942	3300006846	Populus Rhizosphere	MSLSRDSRQERKLKAVRRAQFRLKQTIERIDWEEDILLPEIEALKAGKSILGLPEGAAFDIVIESSDAHPAAATPGDARE*
Ga0075431_1011940682	3300006847	Populus Rhizosphere	MSLSRDSRQERKLKAIRRAQFRLKQNLERIDWEEDELLPEIEALKSGKSVLGLPAGAAFDIQIEDENPGQS*
Ga0075420_1016483711	3300006853	Populus Rhizosphere	MALSRDSRQEQKLKAIRRAQFRLAQRLATIDWENDVLMPEIEALKAGKPVLGLSEGTAFEIVIDHANHDQGQADRGGSAKRSRRR*
Ga0079217_108128742	3300006876	Agricultural Soil	MSLSRDSRAERKLKAVRRAQFNLKQALERIDWIEDQLLPEVEALKAGKPVLGLPEGVAFDIQVVSDEDSNTPSANHASE*
Ga0079218_135819931	3300007004	Agricultural Soil	VSLSRDSRQERKLKALRRAQFRLKQALERIDWEEDTLLPEIEALKSGKSVLGLPEGAAFD
Ga0104986_191222	3300007734	Freshwater	VPLSRDSRQERKLKALRRAQFRLKQSLERIDWEEDTLLPEIEALKSGKSVLGLPDGAAFDICIEDHDPAKDAH*
Ga0114129_102901066	3300009147	Populus Rhizosphere	VSLSRDSRQERKLKAVRRAQFRLKQNLERIDWEEDSLLPEIEALKSGKSVLGLPDGMAFDIVIEHEVQNPSEAAKPDADA*
Ga0111538_101074238	3300009156	Populus Rhizosphere	MSLSRDSRQEKKLKAIRLAQHRLRQRLETIDWIEDHLLPEIEALKSGKSVLGLEAGSAFDIRIESDDHHNQDAPASSDKGHHD*
Ga0075423_104001753	3300009162	Populus Rhizosphere	VSLSRDSRQERKLKAVRRAQFRLKQNLERIDWEEDSLLPEIEALKSGKSVLGLPDGMAFDIVIEHEAIQESTEDADN*
Ga0075423_116239401	3300009162	Populus Rhizosphere	PCKAEAQLLSRDSRQERKLKAVRRAQFRLKQALERIDFEEDVLLPEIEALKSGKGVLGLPDGVAFDIEIVHETPDPAKTDSAD*
Ga0075423_123096881	3300009162	Populus Rhizosphere	MSLSRDSRQERKLKAVRRAQFRLKQAIERIDWEEDYLLPEVEALKAGKSVLGLEAGSAFDIQVENQKPVKSKRR*
Ga0103680_1000051012	3300009285	Groundwater	MSLSRDSRQERKLKALRRAQFRLKQRFESIDFEEDVLLPEIEALKSGRSVLGLAEGTAFDLQIVDDAHPDSTKIDA*
Ga0103680_100151846	3300009285	Groundwater	MSLSRDSRQERKLKALRRAQFRLTQRFEYIDWEEDVLIPEVEALKAGRPVFGLTDGRMFEIEIEESHADPDQTPPDHTEPDPRTR*
Ga0103680_100166567	3300009285	Groundwater	LSLSRDSRQESKLKALRRAQFRLKQRFEYIDWVEDHLLPEIEALKSGKSVLGLPEGAVFDIQVDDENQNPQPPKTDEPA*
Ga0105259_10024173	3300009597	Soil	MSLSRDSRQERKLKLFLRTQFRFKQGIERIDWEEDVLLPEVEKLKSGGSVLGLPEGMAFDIQVVDQSEPEKD*
Ga0105340_10846272	3300009610	Soil	MLSRDSRQERKLKAFRRAQFNLKQLFERIDWTEDVLLPEVEALKSGKSILGLPEGAAFDLVIEHENPDPPAPSDTGQ*
Ga0105340_14312941	3300009610	Soil	MSLSRDSRQERKLKLFLRTQFRFKQGIERIDWEEDVLLPEVEKLKSGGSVLGLPDGMAFDIQVVDANSTHPKADNSSE*
Ga0105252_100684914	3300009678	Soil	LSLSRDSRQERKLKLLLRTQFRFKQGLERIDFEEDVLLPEIEKLKSGGSVLGLPEGVAFDIHIDHENPDPPASTPEHRPRT
Ga0105252_100911082	3300009678	Soil	VSLSRDSKQERKLKLLLRTQFRLKQGFERIDFEENELLPQIAAMKAGKSVLGLEPGAAFDIQIEPEKPKRRRT*
Ga0105252_101575191	3300009678	Soil	LSRDSRTERKLKLLRRTEVRLKQGFERIDFEEDVLGPEIEALKAGKPILGLEAGSVFDIQIVDDADPDRS*
Ga0105252_104012991	3300009678	Soil	NSLGPLTLTSKRGDVSLSRDSRTEKKLKALRRAEFGLKQRFERIDWEEDVLLPEVEKLKSGGSVLGLPEGMAFDIQVVDADPDHSKTDKPTE*
Ga0137312_10370192	3300011400	Soil	VSLSRDSRIEQKLKAVRLAEKRLEQRLEMIDWREDVLLPELEAFKSGKSVLGLPAGVAFDIRIDHVDPNHPKTDDTER*
Ga0137325_10001477	3300011415	Soil	MLSRDGRQERKLKAIRWAQFRLKQRLEAIDFMEDVLGPEVEALKSGKSVLGLAEGMAFDIKVVDHADSDHPQTDDAE*
Ga0137422_10235822	3300011416	Soil	MSLSRDSRTEKKLKALLRTKFRLKQQFEYIDYCEDVLIPEVEKLKAGKPVLGLDAGMAFDLVIDDDANPNPPQTNDTH*
Ga0137462_10001929	3300011421	Soil	MRSEFRLKQGLERIDWEEDVLLPEIEAYKSGKSVLGMPAGSAFDIKVEHVAQVQDGSKAADPNTAADNATRSEN*
Ga0137423_11418312	3300011430	Soil	MSLSRDSRQERKLKALRRAEFRLKQSFERIDWEEDCLLPEITALKSGKSVLGLGEGMAFDIRVE
Ga0137438_10996182	3300011431	Soil	MSLSRDSRQERKLKALRRTQFRLRQAFERIDWEEDELLPEIEALKSGKSILGLPEGAAFDIQIQHENTDSIKSDENQ*
Ga0137428_10033652	3300011432	Soil	LSLSRDSRAERQLKAIRRAQFRLKQTLERIDWEEDKLLPEIEALKSGKPVLGLPEGSAFEIVIDDADQNPS*
Ga0137426_11520291	3300011435	Soil	LSLSRDSRQERKLKLLLRTQFRFKQGLERIDFEEDVLLPEIEKLKSGGSVLGLPEGVAFDIHIDHEN
Ga0137429_11243592	3300011437	Soil	LSLSRDSRQERKLKLLLRTQFRFKQGLERIDFEEDVLLPEIEKLKSGGSVLGLPEGVAFDIHIDHENPDPPASTPEHRPRTP
Ga0137432_10190233	3300011439	Soil	MLSRDGRQERKLKAIRWAQFRLKQRLEAIDFMEDELGPEVEALKSGKSVLGLADGMAFDIKVVDADSNHPKTDDAGE*
Ga0137432_12756762	3300011439	Soil	MSLSRDSRQERKLKAIRMAQWRLKQRLETIDFLEDELQPEVEALKSGKSVLGLPEGVAFDIVIEAEEKK*
Ga0137433_10633641	3300011440	Soil	VLSRDSRQERKLKAIRWAQHRLAQRLQTIDWIEDVLTPEIEAIKSGGSVLGLPAGEAFDIQI
Ga0137457_11262542	3300011443	Soil	MSLSRDSRQERKFKAVRRAQFRLKQNLERIDWEEDELLPEIAAMKSGESFMGLPAGTAFDIQIESHADQNHPAPADCTDNATRSEN*
Ga0137457_11803562	3300011443	Soil	VPLSRDSRTEKKLKALRRAEFKLRQQFEYIDWSEDVLFPEIEALKSGRPVLGLEAGAVFDLQVTDAHTSRDEARKPAG
Ga0137457_12451791	3300011443	Soil	VSLSRDSKQERKLKLLLRTQFRLKQGFERIDFEENELLPQIAAMKAGKSVLGLEPGAAFDIQIEPEKPKRKR*
Ga0120191_100189792	3300012022	Terrestrial	MPLNRDNRAEKKLKALRRAQWRLKQRLETIDWEEDDFIPEMEALKSGKSVLGLPAGAAFDIKVENEIPNHEPTDTDE*
Ga0137349_10911432	3300012160	Soil	VSLSRDSRQERKLKAIRWAQFRLKQRLEAIDFMEDVLGPEIEQLKSSGSVLDLPPCEAFDIVLEADVATPDQTTGEN*
Ga0137378_108217902	3300012210	Vadose Zone Soil	MSLSRDSRQEKKVKALLRAQYGLKVRLERIDWEEDYFLPLLEDLKAGKSVLGLPAGAAFDVEIVDENSSDNKTK*
Ga0137384_115515821	3300012357	Vadose Zone Soil	MSLSRDSRQEKKVKALLRAQYGLKVRLERIDWEEDYFLPLLEDLKAGKSVLGLPAGAAFDVEIVDENSS
Ga0136635_103676581	3300012530	Polar Desert Sand	SRDSRQERKLKAIRMAQFRLRQRLETIDWLEDVLQPEVEALKSGKSVLGLPDGVAFDIQIEPDENPH*
Ga0180010_10294811	3300014148	Groundwater	MSLSRDSRQERKLKALRRAQFRLKQRFEVIDFEEDVLLPEIEALKSGKSVLGLLEGAAFDIQVVDEGMTN*
Ga0180008_10361563	3300014613	Groundwater	MSLSRDSRQERKLKAIRRAQIRLKQRFELIDWEEDVLLPEIEALKSGKAVLGLTEGAAFDIQVVDETSHENPDPPTTD*
Ga0157377_105375953	3300014745	Miscanthus Rhizosphere	MSLSRDSRTERKLKAIRMAQWRLKQRLETIDFLEDELQPEIEKLKSGQSVLGLPDGVAFDLVI
Ga0180064_10912331	3300014876	Soil	VSLSRDSRQERKLKLFLRTQFRFKQGIERIDWEEDVLLPEVEKLKSGGSVLGLPEGMAFDIQVVDSADSDHPKTDTPTE*
Ga0132258_124789811	3300015371	Arabidopsis Rhizosphere	VLSRDSRQERKLKAVRRTMFRLKQNLERIDWEEDVLLPEIEALKAGKSVLGLPDGSAFDIQIVTDAHPDHSQTPETD*
Ga0184639_103875042	3300018082	Groundwater Sediment	MSLSRDSRQERKLKAIRWAQHRLKQRIETIDWMDDSLGPEVEALKSGKSVLGLPAGVAFDIQVVDENSDH
Ga0184628_1000127011	3300018083	Groundwater Sediment	VSLSRDSRQERKLKALRRTQFRLKQAFDRIDWEEDVLMPEIEALKSGKSVLGLDAGSAFDIQIEDGPSDHQNQGE
Ga0184628_100052367	3300018083	Groundwater Sediment	VSLSRDSKQERKLKLLLRTQFRLKQGFERIDFEENELLPQIAAMKAGKSVLGLEPGAAFDIQIEPEKPKRKR
Ga0184628_101441594	3300018083	Groundwater Sediment	VSLSRDSMQERKLKLLLRTQFRLKQGFQRIEFEENELLPQIAAMKAGKSVLGLEPGAAFDIQVEPEKPKRKR
Ga0184628_101718183	3300018083	Groundwater Sediment	MSLSRDSRAERKLKAIRRAQFRLRQAMDRIDWEEDTLQPEIEALKSGRSVLGLPEGSAFDIEIVHEVTDPTTPQ
Ga0184628_102866142	3300018083	Groundwater Sediment	LSLSRDSRQERKLKALRRTQFRLKQAFDRIDWEEDVLMPEIEALKSGKSVLGLEPGSAFNIQIEDDHQDQGE
Ga0184628_104963841	3300018083	Groundwater Sediment	VLSRDSRQERKLKAFRRAQFRLKQQFEYIDWTEDVLLPEVEALKSGKSILGLPEGAAFDLVIDENPDPSPTPNSGE
Ga0184629_105038751	3300018084	Groundwater Sediment	MSLSRDSRQERKLKAYRRAQFALKQRMERIDWEEDSLAPEIATLKAGGSVLGLPEGAAFDITVEDENQNNDNGNA
Ga0184629_107077131	3300018084	Groundwater Sediment	VSLSRDSRAERKLKLFRRTQFRLKQGLERIDFEEDVLGPEIEALKAGRAVLGLPEGVVFDITIEHEVPAEKPRPDTD
Ga0187892_1000212252	3300019458	Bio-Ooze	MSLSRDSRQERKLKTLRRAQFRLKQRFESIDWEEDVLTPEVLALKAGKPVLGLPAGAAFDIQVEDENSNKE
Ga0187893_100227305	3300019487	Microbial Mat On Rocks	MSLSRDSRQERKLKALRRAQFRLKQRFESIDWEEDVLTPEVLALKAGKPVLGLPAGAAFDIQVEDENSNKE
Ga0193738_10018393	3300020020	Soil	VLSRDSRAEKKLKAFRRAQFRLKQQFEYIDWTEDSLLPEVEALKSGKSVLGLPEGAAFDLVIDANPDPATPTNPGE
Ga0193738_10052388	3300020020	Soil	VLSRDSRAEKKLKAFRRAQFRLKQQFEYIDWTEDILLPEVEALKSGKSVLGLPDGAAFDLVIDASPDPAPADHTE
Ga0193738_10144814	3300020020	Soil	VLSRDSRAEKKLKLYRRAQFRLKQQFEYVDWCEDFLLPEVEALKSGKSVLGLPEGAAFDLVIEGADANPSPTAPTDPSE
Ga0196964_100009931	3300020202	Soil	VLSRDSRQERKLKAIRMAQWRLKQRLETIDFLEDVLQPEVEALKAGKSVLGLDEGVAFDIRIVDADSNHPAKP
Ga0196964_100030993	3300020202	Soil	VSLSRDSRQEKKLKAIRLAQFRLKQRLEAIDFVEDVLLPEIEALKSGKSVLGLPEGAAFDIQIVDDAHSHQADRADAK
Ga0196964_101436032	3300020202	Soil	MSLSRDSRAERKLKAFRRAQFRLKQALERIDFEEDVLLPEIAALKSGKSVLGLPEGAAFDIQIVNDADSDPNTSASGQ
Ga0196963_101948063	3300020215	Soil	MSLSRDSRQERKLKAFRRAQFRLKQALQRIDWEEDVLMPEIEALKSGRSVLGLPEGAAFDITIEDDAVPAPVDHDTH
Ga0196963_102109692	3300020215	Soil	VPLSRDSRQERKLKALRRAQFRLQQTLQRIDWEEDVLLPEIEALKAGKSVLGLPDGAAFDILIEHENPHPGQAADAD
Ga0196963_102396661	3300020215	Soil	VLSRDSRQERKLKAIRMAQWRLKQRLETIDFLEDVLQPEVEALKAGKSVLGLDEGVAFDIRIVDADSNHPAKPDAE
Ga0196963_102905672	3300020215	Soil	MPLSRDSRAEKKLKALRRAQFALQQRLQRIDWEEDVLYPEVEALKSGKSVLGLPEGVAFEIVIEQDDTK
Ga0196974_11001662	3300021062	Soil	MSLSRDSRAERKLKAFRRAQFRLKQALERIDFEEDVLLPEIAALKSGKSVLGLPEGAAFDIQIVNDADS
Ga0214923_1000099345	3300023179	Freshwater	MPLSRDSRAERKLKAIRRAQFRLKQTMERIDWEEDTLLPEIEALKSGKSVLGLPEGAAFDICIEDDADHDPNQAAH
Ga0247672_10233412	3300024187	Soil	MSLSRDSRAERKLKAFRRAEFRLQQALERIDWEEDKLLPELEAFKSGKPVLGLPAGTMFDIQIEGDENPNHPARKASRKRSSHRR
Ga0247664_10185426	3300024232	Soil	MPLSRDSRQERKLKAVRRAQFRLQQNLERIDWEEDVLMPEIEALKSGKSVLGLGDGVAFDIVIEHENSDSTEADGAGTD
Ga0247670_10263523	3300024283	Soil	MPLSRDSRQERKLKAVRRAQFRLQQNLERIDWEEDVLMPEIEALKSGKSVLGLGDGVAFDIVIEHENPDSTEADGAGTD
Ga0247668_10943262	3300024331	Soil	LSRDSRQERKLKAVRRAQFRLQQNLERIDWEEDVLMPEIEALKSGKSVLGLGDGVAFDIVIEHENSDSTEADGAGTD
Ga0209640_105528972	3300025324	Soil	MSLSRDSRQERKLKALRRAQFRLKQRFESIDWEEEVLLPEIEALKSGRSVLGLTEGAAFDIQIVDEAPADEDSRPVKAKSRSK
Ga0207662_1000317712	3300025918	Switchgrass Rhizosphere	MSLSRDSRQERKLKALRRAQFALKQRFERIDFEEDVLMPEVEALKAGKSVLGLEAGTAFDIKVGVE
Ga0207646_100772942	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSRDSRQERKLKAVRRAQFRLKQNLERIDWEEDSLLPEIEALKSGKSVLGLPDGMAFDIVIEHEVQNPSEAAKPDTDA
Ga0207646_107077521	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSLSRDSRQERKLKAVRRAQFRLKQNLERIDWEEDSLLPEIEALKSGKSVLGLPDGMAFDIVIEHEVQNPSEAAKPDTDA
Ga0207675_1023249961	3300026118	Switchgrass Rhizosphere	MSLSRDSRQERKLKALRRAQFRLQQNFQRIDWEEDVLLPEIEALKAGKSVLGLPEGAAFDIQIEDDADRSQDQNRAE
Ga0208320_10025852	3300027362	Soil	MSLSRDSRQERKLKLFLRTQFRFKQGIERIDWEEDVLLPEVEKLKSGGSVLGLPEGMAFDIQVVDQSEPEKD
Ga0208185_10969332	3300027533	Soil	VSLSRDSRQERKLKAIRWAQFRLKQRLEAIDFMEDVLGPEIEQLKSSGAVLGLPAGEAFDIQIVADANPDHTTS
Ga0208185_11052192	3300027533	Soil	MSLSRDSRQERKLKLFLRTQFRFKQGIERIDWEEDVLLPEVEKLKSGGSVLGLPDGMAFDIQVVDANSTHPKADNSSE
Ga0208454_10126712	3300027573	Soil	VSLSRDSKQERKLKLLLRTQFRLKQGFERIDFEENELLPQIAAMKAGKSVLGLEPGAAFDIQIEPEKPKRRRT
(restricted) Ga0233416_100556572	3300027799	Sediment	MSLSRDSRQERKLKAFRRAQFRLKQRLESIDFEEDVLLPEIEALKAGRSVLGLPPGAAFDITIENDAIQTHANTPDDADEN
Ga0209382_111533231	3300027909	Populus Rhizosphere	MSLSRDSRQERKLKAIRRAQFRLKQNLERIDFEEDVLLPEIEALKSGKSVLGLPAGAAFD
Ga0247822_112864402	3300028592	Soil	MSLSRDSRQERKLKAFRRAQFRLQQAIQRIDWEEDILQPEIEALKSGKSVLGLPAGAAFDIVIEAS
Ga0247824_107039742	3300028809	Soil	MSLSRDSRQERKLKAFRRAQFRLQQAIQRIDWEEDILQPEIEALKSGKSVLGLPAGAAFDIVIEASDDQVQAAPADTSDDSY
Ga0307376_100633035	3300031578	Soil	MSLSRDSRQERKLKAILRAQFRLKQRFESIDWEEDVLMPEVEALKSGRSVLGLEAGTAFDLQVVDDRGDDAHPHTDDNGTQH
Ga0315900_104557801	3300031787	Freshwater	VSLSRDSRTEKKLKALRRAEFRLRQQFEYIDWTEDVLYPEIEALKAGRPVLGLEAGAVFDLRVADAHPHSAVPHAEPGSDP
Ga0310904_105888622	3300031854	Soil	VSLSRDSRQERKLKALRRAQFRLQQNFQRIDWEEDVLLPEIEALKAGKSVLGLPEGAAFDIQIEDDADRSQDQNRAE
Ga0315909_100256121	3300031857	Freshwater	VSLSRDSRTEKKLKALRRAEFRLKQQFEYIDWTEDVLIPEIDSLKAGRPVLGLEAGALFDLQVAD
Ga0310892_113904872	3300031858	Soil	MALSRDSRQERKLKAVRRAQFRLKQSLERIDFEEDVLMPEIEALKSGKSILGLPAGAAFDIQVDHADSHHSPTTGRPKRSKRVSH
Ga0307412_117134011	3300031911	Rhizosphere	VSLSRDSRAEKKLKALRLAQFRLKQRFDMIDFVEDVLMPEVEAMKAGKPVLGLDAGAAFDLVVKHED
Ga0315910_108595371	3300032144	Soil	MSLSRDSRQERKLKAFRRSQFRLKQAIERIDWEEDFLLPEIEALKAGRPVLGLPEGVAFDIQVET
Ga0335085_110064532	3300032770	Soil	RDTREEKKLKALRRAEFALKQRFERIDWEEDELIPEVEALKAGHAVLGLPENTSFDIEVIDEDSDLDGS
Ga0247830_104624282	3300033551	Soil	LSLSRDSRAERKLKAIRWAQHRLAQRLQTIDWQEEVLMPEIEALKSGKAVLGLVEGTAFDIEIVNETQNPGDNGKSGT
Ga0247830_106209751	3300033551	Soil	MSLSRDSLAERQLKLILRTKFRLKQGLERLQWEEDILIPQIEALKSGKSVMGLPEGSSIDIEIVHEDPNPSNS
Ga0247830_107384232	3300033551	Soil	MSLSRDSRQERKLKAFRRAQFRLQQAIQRIDWEEDILQPEIEALKSGKSVLGLPAGAAFDIVIEASDDQVQAAPDNTSDESY
Ga0247830_110968651	3300033551	Soil	MSLSRDSRQERKLKAFRRAQFRLQQAIQRIDWEEDILQPEIEALKSGKSVLGLPAGAAFDIVIEASDDQVQAAPDNTSDDSY
Ga0247830_113695691	3300033551	Soil	MSLSRDSRQERKLKAFRRAQFRLQQAIQRIDWEEDILQPEIEALKSGKSVLGLPAGAAFDIVIEALDDQVQAAPDNTSDESY
Ga0373909_0326014_41_250	3300034191	Sediment Slurry	MSLSRDSRQERKMKAIRMAQWRLKQRLETIDFQEDVLQPEVEALKSGKSVLGLEAGSAFDIQVVVDNEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters