NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F061341

Metagenome / Metatranscriptome Family F061341

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F061341
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 52 residues
Representative Sequence MAKKKNITVGTIKGIDVIRQTKPIQDIPFRTGVYTDKRKKREKVNKNRLDKWL
Number of Associated Samples 43
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.15 %
% of genes near scaffold ends (potentially truncated) 12.88 %
% of genes from short scaffolds (< 2000 bps) 54.55 %
Associated GOLD sequencing projects 34
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (67.424 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen
(53.030 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(79.545 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.99%    β-sheet: 0.00%    Coil/Unstructured: 79.01%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF11753DUF3310 5.43
PF04308RNaseH_like 1.55
PF14284PcfJ 1.55
PF13392HNH_3 1.55
PF12850Metallophos_2 0.78
PF13306LRR_5 0.78
PF06941NT5C 0.78
PF07275ArdA 0.78
PF01139RtcB 0.78
PF14471DUF4428 0.78
PF00692dUTPase 0.78
PF11645PDDEXK_5 0.78
PF01791DeoC 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 0.78
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 0.78
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 0.78
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 0.78
COG4734Antirestriction protein ArdADefense mechanisms [V] 0.78


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A67.42 %
All OrganismsrootAll Organisms32.58 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2061766007|rumenHiSeq_NODE_285085_len_90052_cov_2_123284All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes90102Open in IMG/M
2061766007|rumenHiSeq_NODE_285085_len_90052_cov_2_123284All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes90102Open in IMG/M
2061766007|rumenHiSeq_NODE_285085_len_90052_cov_2_123284All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes90102Open in IMG/M
2061766007|rumenHiSeq_NODE_3881341_len_34399_cov_1_095294Not Available34449Open in IMG/M
2061766007|rumenHiSeq_NODE_4166853_len_15190_cov_0_692758Not Available15240Open in IMG/M
2077657009|BRPC3_GDEZLPW01BAES1Not Available538Open in IMG/M
3300001484|rank12_10117891All Organisms → Viruses → Predicted Viral1412Open in IMG/M
3300012016|Ga0120387_1180360Not Available711Open in IMG/M
3300012983|Ga0123349_10087654Not Available2135Open in IMG/M
3300012983|Ga0123349_10463980Not Available881Open in IMG/M
3300014057|Ga0120384_1253815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales586Open in IMG/M
3300018430|Ga0187902_10195485All Organisms → Viruses → Predicted Viral1896Open in IMG/M
3300018494|Ga0187911_10267047All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.2097Open in IMG/M
3300018878|Ga0187910_11008880Not Available949Open in IMG/M
3300021254|Ga0223824_10014407Not Available7680Open in IMG/M
3300021254|Ga0223824_10028437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales5233Open in IMG/M
3300021254|Ga0223824_10065234Not Available3339Open in IMG/M
3300021254|Ga0223824_10087972Not Available2838Open in IMG/M
3300021254|Ga0223824_10114367All Organisms → Viruses → Predicted Viral2458Open in IMG/M
3300021254|Ga0223824_10368441All Organisms → Viruses → Predicted Viral1229Open in IMG/M
3300021254|Ga0223824_10878482Not Available669Open in IMG/M
3300021254|Ga0223824_11029833Not Available593Open in IMG/M
3300021255|Ga0223825_10531334Not Available581Open in IMG/M
3300021256|Ga0223826_10003489Not Available22071Open in IMG/M
3300021256|Ga0223826_10104808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales2551Open in IMG/M
3300021256|Ga0223826_10115771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales2408Open in IMG/M
3300021256|Ga0223826_10653368Not Available800Open in IMG/M
3300021256|Ga0223826_10661236Not Available793Open in IMG/M
3300021387|Ga0223845_10627466Not Available1245Open in IMG/M
3300021387|Ga0223845_10830874Not Available893Open in IMG/M
3300021387|Ga0223845_10864411Not Available10892Open in IMG/M
3300021387|Ga0223845_11306235Not Available914Open in IMG/M
3300021387|Ga0223845_11550841All Organisms → Viruses → Predicted Viral1399Open in IMG/M
3300021387|Ga0223845_11554529Not Available658Open in IMG/M
3300021387|Ga0223845_11554530Not Available655Open in IMG/M
3300021387|Ga0223845_11582390All Organisms → Viruses → Predicted Viral1423Open in IMG/M
3300021387|Ga0223845_11760573All Organisms → Viruses → Predicted Viral3785Open in IMG/M
3300021387|Ga0223845_12200628All Organisms → Viruses → Predicted Viral2883Open in IMG/M
3300021399|Ga0224415_10010822All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae8890Open in IMG/M
3300021399|Ga0224415_10014641Not Available7487Open in IMG/M
3300021399|Ga0224415_10028471Not Available5190Open in IMG/M
3300021399|Ga0224415_10050364All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.3839Open in IMG/M
3300021399|Ga0224415_10067124Not Available3311Open in IMG/M
3300021400|Ga0224422_10323685All Organisms → Viruses → Predicted Viral3748Open in IMG/M
3300021400|Ga0224422_10502929All Organisms → Viruses → Predicted Viral1702Open in IMG/M
3300021400|Ga0224422_10650061Not Available1349Open in IMG/M
3300021400|Ga0224422_10675101Not Available3279Open in IMG/M
3300021400|Ga0224422_11721344Not Available1615Open in IMG/M
3300021400|Ga0224422_12147506All Organisms → Viruses → Predicted Viral1057Open in IMG/M
3300021426|Ga0224482_10006789Not Available12343Open in IMG/M
3300021426|Ga0224482_10279809Not Available1448Open in IMG/M
3300021431|Ga0224423_10036564Not Available4876Open in IMG/M
3300021431|Ga0224423_10036564Not Available4876Open in IMG/M
3300021431|Ga0224423_10167164Not Available2120Open in IMG/M
3300021431|Ga0224423_10231772Not Available1759Open in IMG/M
3300021431|Ga0224423_10246070All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.1699Open in IMG/M
3300024269|Ga0257076_10713900All Organisms → Viruses → Predicted Viral1105Open in IMG/M
3300024269|Ga0257076_12220082Not Available531Open in IMG/M
3300024270|Ga0257091_11571944Not Available656Open in IMG/M
3300026525|Ga0256870_1005059Not Available5677Open in IMG/M
3300026549|Ga0256404_1000389All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales115301Open in IMG/M
3300026549|Ga0256404_1006265Not Available19928Open in IMG/M
3300026549|Ga0256404_1031332Not Available4763Open in IMG/M
3300028591|Ga0247611_10003798Not Available21868Open in IMG/M
3300028591|Ga0247611_10081405All Organisms → Viruses → Predicted Viral3323Open in IMG/M
3300028591|Ga0247611_11083658Not Available816Open in IMG/M
3300028591|Ga0247611_11197494Not Available764Open in IMG/M
3300028591|Ga0247611_12029183Not Available532Open in IMG/M
3300028797|Ga0265301_10000969Not Available39365Open in IMG/M
3300028797|Ga0265301_10002205Not Available23135Open in IMG/M
3300028797|Ga0265301_10003491All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes16531Open in IMG/M
3300028797|Ga0265301_10004499Not Available14056Open in IMG/M
3300028797|Ga0265301_10008902Not Available9192Open in IMG/M
3300028797|Ga0265301_10018855Not Available5740Open in IMG/M
3300028797|Ga0265301_10108987All Organisms → Viruses → Predicted Viral2111Open in IMG/M
3300028797|Ga0265301_10224123Not Available1421Open in IMG/M
3300028797|Ga0265301_10563198Not Available844Open in IMG/M
3300028805|Ga0247608_10334199Not Available1501Open in IMG/M
3300028805|Ga0247608_11162893Not Available700Open in IMG/M
3300028805|Ga0247608_11704036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales534Open in IMG/M
3300028832|Ga0265298_10765762Not Available855Open in IMG/M
3300028833|Ga0247610_10000465Not Available57247Open in IMG/M
3300028833|Ga0247610_10101059All Organisms → Viruses → Predicted Viral2874Open in IMG/M
3300028833|Ga0247610_10222512All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.1948Open in IMG/M
3300028833|Ga0247610_10302989All Organisms → Viruses → Predicted Viral1666Open in IMG/M
3300028833|Ga0247610_11069570Not Available810Open in IMG/M
3300028833|Ga0247610_11613389Not Available617Open in IMG/M
3300028886|Ga0256407_10012267Not Available11696Open in IMG/M
3300028886|Ga0256407_10023815Not Available7141Open in IMG/M
3300028886|Ga0256407_10502548Not Available922Open in IMG/M
3300028887|Ga0265299_10931309Not Available726Open in IMG/M
3300028887|Ga0265299_11687749Not Available509Open in IMG/M
3300028888|Ga0247609_10003577Not Available15732Open in IMG/M
3300028888|Ga0247609_10007890Not Available10073Open in IMG/M
3300028888|Ga0247609_10008597Not Available9592Open in IMG/M
3300028888|Ga0247609_10045366All Organisms → cellular organisms → Bacteria4049Open in IMG/M
3300028888|Ga0247609_10429748Not Available1398Open in IMG/M
3300028888|Ga0247609_10615500All Organisms → Viruses → Predicted Viral1148Open in IMG/M
3300028888|Ga0247609_10755450All Organisms → Viruses → Predicted Viral1019Open in IMG/M
3300028888|Ga0247609_11921268Not Available559Open in IMG/M
3300028914|Ga0265300_10098889Not Available1974Open in IMG/M
3300030772|Ga0061013_12748747Not Available1163Open in IMG/M
3300031760|Ga0326513_10000491Not Available33470Open in IMG/M
3300031760|Ga0326513_10024665Not Available4457Open in IMG/M
3300031760|Ga0326513_10029393All Organisms → Viruses → Predicted Viral4112Open in IMG/M
3300031760|Ga0326513_10040627All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.3560Open in IMG/M
3300031760|Ga0326513_10178480Not Available1823Open in IMG/M
3300031760|Ga0326513_10470393All Organisms → Viruses → Predicted Viral1130Open in IMG/M
3300031853|Ga0326514_10001630Not Available14535Open in IMG/M
3300031853|Ga0326514_10896768Not Available773Open in IMG/M
3300031853|Ga0326514_11146475Not Available665Open in IMG/M
3300031853|Ga0326514_11311193Not Available611Open in IMG/M
3300031867|Ga0326511_10004483Not Available11097Open in IMG/M
3300031867|Ga0326511_10188960Not Available1961Open in IMG/M
3300031867|Ga0326511_10196355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1926Open in IMG/M
3300031867|Ga0326511_10543908Not Available1156Open in IMG/M
3300031992|Ga0310694_10382435Not Available1445Open in IMG/M
3300031992|Ga0310694_10697153Not Available1022Open in IMG/M
3300031993|Ga0310696_12113682Not Available548Open in IMG/M
3300031994|Ga0310691_11407558Not Available700Open in IMG/M
3300031998|Ga0310786_10385790All Organisms → Viruses → Predicted Viral1596Open in IMG/M
3300032007|Ga0310695_10060436All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.3843Open in IMG/M
3300032030|Ga0310697_10752220Not Available995Open in IMG/M
3300032030|Ga0310697_11640727Not Available596Open in IMG/M
3300032038|Ga0326512_10002615Not Available13311Open in IMG/M
3300032038|Ga0326512_10819544Not Available706Open in IMG/M
3300032038|Ga0326512_10908648Not Available661Open in IMG/M
3300032167|Ga0224413_11161888Not Available955Open in IMG/M
3300033463|Ga0310690_10066983All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.4126Open in IMG/M
3300033463|Ga0310690_10489774All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.1394Open in IMG/M
3300033463|Ga0310690_10722761All Organisms → Viruses → Predicted Viral1120Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen53.03%
Cattle And Sheep RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen32.58%
Goat FecesHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces5.30%
Bovine RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen4.55%
Sheep RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen2.27%
FecalHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal1.52%
Fungi-Associated Bovine RumenHost-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2061766007Bovine rumen microbial communities fromthe University of Illinois at Urbana-Champaign, USA, that are switchgrass associated - Sample 470Host-AssociatedOpen in IMG/M
2077657009Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 6993Host-AssociatedOpen in IMG/M
3300001484Sheep rumen microbial communities from New Zealand - Rank12_lowHost-AssociatedOpen in IMG/M
3300012016Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1397Host-AssociatedOpen in IMG/M
3300012983Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 MetagenomeHost-AssociatedOpen in IMG/M
3300014057Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1208Host-AssociatedOpen in IMG/M
3300018430Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Bagasse, Gen0, Rep 2, ChloramphenicolHost-AssociatedOpen in IMG/M
3300018494Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2Host-AssociatedOpen in IMG/M
3300018878Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1Host-AssociatedOpen in IMG/M
3300021254Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021255Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021256Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021387Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021399Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021400Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021426Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021431Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assemblyHost-AssociatedOpen in IMG/M
3300024269Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2 Spades (v3)Host-AssociatedOpen in IMG/M
3300024270Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 1 Spades (v3)Host-AssociatedOpen in IMG/M
3300026525Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_06 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300026549Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_01Host-AssociatedOpen in IMG/M
3300028591Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2Host-AssociatedOpen in IMG/M
3300028797Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04Host-AssociatedOpen in IMG/M
3300028805Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2Host-AssociatedOpen in IMG/M
3300028832Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01Host-AssociatedOpen in IMG/M
3300028833Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2Host-AssociatedOpen in IMG/M
3300028886Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04Host-AssociatedOpen in IMG/M
3300028887Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02Host-AssociatedOpen in IMG/M
3300028888Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2Host-AssociatedOpen in IMG/M
3300028914Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03Host-AssociatedOpen in IMG/M
3300030772Coassembly of Cow X SwitchgrassHost-AssociatedOpen in IMG/M
3300031760Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518Host-AssociatedOpen in IMG/M
3300031853Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518Host-AssociatedOpen in IMG/M
3300031867Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518Host-AssociatedOpen in IMG/M
3300031992Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2)Host-AssociatedOpen in IMG/M
3300031993Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 (v2)Host-AssociatedOpen in IMG/M
3300031994Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)Host-AssociatedOpen in IMG/M
3300031998Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)Host-AssociatedOpen in IMG/M
3300032007Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04 (v2)Host-AssociatedOpen in IMG/M
3300032030Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)Host-AssociatedOpen in IMG/M
3300032038Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518Host-AssociatedOpen in IMG/M
3300032167Three Goat Fecal PelletsHost-AssociatedOpen in IMG/M
3300033463Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
_HiSeq_028412302061766007Bovine RumenMSNKKKSQKVGIIRGIDLLKSSRPMQNIPFRTGVYSDKRKKREKVNKNKLDKWL
_HiSeq_028412702061766007Bovine RumenMNKKKTEKIGTISGMEILKNTRPMQDIPFRTGSFSDKRKKREKVTKNNYYKWI
_HiSeq_028418302061766007Bovine RumenMAKKKNIKVGTISGLDVLKQTRPPQDIPFRTGSYTDKRKKREKINKNRLDKWL
_HiSeq_250776302061766007Bovine RumenMANKKKTEKIGTISGLEVLKHTRGPQDIPFRTGVRENKKKKNSREKINKNRLDKWL
_HiSeq_200398602061766007Bovine RumenMANKNKTQTIGIIKSIDLLKKTKPIQQVTFRTGTYTDKRKKREKINRNNIDKYL
BRPC3_005111502077657009Bovine RumenMAKKKNIKVGTINGLDVLKQTRPPQDIPFRTGSYTDKRKKREKVNKNRLDKWL
rank12_1011789153300001484Sheep RumenMAKKKNITVGTIKGIDIIRQTKPMQDIPFRTGVYTDKRKKREKINKNRLDKWL*
Ga0120387_118036023300012016Sheep RumenMAKKKKVEKVGTIKAIDMIHASRPIQDIPFRTGAHENKKYKREKVNKKNYEKFL*
Ga0123349_1008765453300012983FecalMANKKKTEKVGTISGLDLLKKSRPIQDIPFRTGSYTDKRKKREKVNKRNYDKYL*
Ga0123349_1046398013300012983FecalMAKKKNIKVGTISGLDVLKQTRPPQDIPFRTGSYTDKRKKREKINKNKLDKWL*
Ga0120384_125381513300014057Sheep RumenMKKKKTEKVGIISGIDVLKNTRPIQDIPFRTGVYSDKRKKREKVNKNKLEKWL*
Ga0187902_1019548553300018430Goat FecesMAKKKNIKVGTISGIDVLRQTRPPQDIPFRTGSYTDKRKKREKINKNRLDKWL
Ga0187911_1026704743300018494Goat FecesMAKKKNIKVGTISGIDVLRQTRPPQDIPFRTGSYTDKRKKREK
Ga0187910_1100888043300018878Goat FecesMAKKKNIKVGTISGIDVLRQTRQPQDIPFRTGSYTDKRKKREKINKNRLDKWL
Ga0223824_1001440793300021254Cattle And Sheep RumenMAKKKNITVGTIKGIDVIRQTKPIQDIPFRTGFNTDKRKKREKVNKNRLDKWL
Ga0223824_1002843743300021254Cattle And Sheep RumenMKKKKTEKIGTIKGIDVLKNTRPMQDIPFRTGVHSDKRKKREKINKNKLEKWL
Ga0223824_1006523453300021254Cattle And Sheep RumenMANKKKSERIGTINGLEILKQTRPPQDIPFRTGSFKDKRKKREKVNKNHLDKWL
Ga0223824_1008797233300021254Cattle And Sheep RumenMAKKKKVEKVGTIKAIDMIHASRPIQDIPFRTGVYKDKRKKREKINKNKLDKWL
Ga0223824_1011436743300021254Cattle And Sheep RumenMAKKKNITVGTIKGIDIVRQTKPIQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0223824_1036844143300021254Cattle And Sheep RumenMAKKKNITVGTIKGIDVIRQTKPIQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0223824_1087848213300021254Cattle And Sheep RumenMAKKKNITVGTIKGIDIVRQTKPIQDIPFRTGVYTDKRKKREKVNKNRLDKWL
Ga0223824_1102983313300021254Cattle And Sheep RumenMAKKKNITVGTIKGIDIIRQTKPIQDISFRTGVYTDKRKKREKVNKRNMDKWM
Ga0223825_1053133413300021255Cattle And Sheep RumenMAKKKKKEKVGTIKAIDMLRQTRPMQDIPFRTGAYDDEKYKRKKIKKRDVYRDIDKYF
Ga0223826_1000348983300021256Cattle And Sheep RumenMSKKKNITVGTIKGIDIVRQTKPIQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0223826_1010480853300021256Cattle And Sheep RumenMKKKKTEKIGTIKGIEVLKNTRPMQDIPFRTGVYSDKRKKREKVNKNKLDKWL
Ga0223826_1011577153300021256Cattle And Sheep RumenMKKKKTEKIGTIKGIDILKNTKPIQDIPFRTGVYSDKRKKREKVNKNKLEKWL
Ga0223826_1065336833300021256Cattle And Sheep RumenMAKKKKNISVGTIKGIDVIRQTKPIQDIPFRIGFYTDKRKKREKVNKNRLDKWL
Ga0223826_1066123613300021256Cattle And Sheep RumenMAKKKNITVGTIKGIDLIKQTKPIQDIPFRTGVYTDKRKKREKVNKRNMDKWM
Ga0223845_1062746633300021387Cattle And Sheep RumenMAKKKKVEKVGTIKAIDMIHASRPIQNIPFRTGVYKDKRKKREKINKNKLDKWL
Ga0223845_1082815723300021387Cattle And Sheep RumenMKKKVETIGIISGADLVRKSRPIQDIPFRTGAYQNKKKKREKVNKNHLDKWM
Ga0223845_1083087413300021387Cattle And Sheep RumenMAKKKKVEKVGTIKAIDTLRQTRPMQDIPFRTGAHENKKYKREKINKNRLDKWL
Ga0223845_1086441183300021387Cattle And Sheep RumenMKKKKIEKVGTIKGIDVLKNTRPMQDIPFRTGVHSDKRKKREKVNKNKLEKWL
Ga0223845_1130623523300021387Cattle And Sheep RumenMAKKKNITVGTIKGIDVIRQTKPMQDIPFRTGVYTDKRKKREKVNKNRLDKWL
Ga0223845_1155084133300021387Cattle And Sheep RumenMAKKKKIEKVGTIKAIDMIHASRPIQDIPFRTGIYENKKYKREKVNKKNYEKFL
Ga0223845_1155452913300021387Cattle And Sheep RumenMAKKKKVEKVGTIKAIDALRQTRPMQDIPFRTGAHENKKYKREKINKNRLDKW
Ga0223845_1155453013300021387Cattle And Sheep RumenMTKKKKVEKVGTIKAIDTLRQTRPMQDIPFRTGAHENKKYKREKINKNRLDKW
Ga0223845_1158239023300021387Cattle And Sheep RumenMAKKKNITVGTIKGIDIIRQTKPMQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0223845_1176057353300021387Cattle And Sheep RumenMAKKKKIEKVGTIKAIDTLRQTRPMQDIPFRTGAHENKKYKREKVNKKNYEKFL
Ga0223845_1220062843300021387Cattle And Sheep RumenMAKKKNITVGTIKGIDVIRQTKPIQDIPFRTGVYTDKRKKREKVNKNRLDKWL
Ga0224415_10010822173300021399Cattle And Sheep RumenMANKKKSERIGTINGLEILKQTRPPQDIPFRTGSFKDKRKKREKINKNHLDKWL
Ga0224415_10014641103300021399Cattle And Sheep RumenMKKKKTEKIGTIKGIDVLKNTRPIQDIPFRTGVHSDKRKKREKVNKNKLEKWL
Ga0224415_1002847143300021399Cattle And Sheep RumenMAKKKNISVGTIKGIDIIRQTKPIQDIPFRTGVYTDKRKKREKINKRNMDKWM
Ga0224415_1005036443300021399Cattle And Sheep RumenMAKKKNITVGTIKGIDVIRQTKPIQDIPFRTGVYTDKRKKREKVNKRNIDKWI
Ga0224415_1006712453300021399Cattle And Sheep RumenMTKKKKVEKVGTIKAIDTLRQTRPMQDIPFRTGAHENKKYKREKINKNRLDKWL
Ga0224422_1032368553300021400Cattle And Sheep RumenMAKKKKIEKVGTIKAIDMIHTSRPIQDIPFRTGAYENKKYKREKVNKKNYEKFL
Ga0224422_1050292913300021400Cattle And Sheep RumenMAKKKKIEKVGTIKAIDMIHASRPIQDIPFRTGIHENKKYKREKVNKKNYEKFL
Ga0224422_1065006133300021400Cattle And Sheep RumenMAKKKKIEKVGTIKAIDTLRQTRPMQDIPFRTGAHENKKYKREKINKNKLDKWL
Ga0224422_1067510183300021400Cattle And Sheep RumenMAKKKNISVGTIKGIDVIRQTKPMQDIPFRTGVYTDKRKKREKVNKRNMDRWM
Ga0224422_1172134433300021400Cattle And Sheep RumenMAKKKKVEKVGTIKAIDMIHASRPMQDIPFRTGVYKDKRKKREKINKNRLDKWL
Ga0224422_1214750633300021400Cattle And Sheep RumenMAKKKNIIVGTIKGIDIIRQTKPIQDIPFRTGAYTDKRKKREKVNKNRLDKWL
Ga0224482_10006789153300021426Cattle And Sheep RumenMAKKKKTEKIGTIKAIDMIHASRPIQDIPFRTGIHENKKYKREKVNKKNYEKFL
Ga0224482_1027980923300021426Cattle And Sheep RumenMAKKKKIEKVGTIKAIDMIHTSRPIQDIPFRTGAHENKKYKREKVNKKNYEKFL
Ga0224423_10036564103300021431Cattle And Sheep RumenMKKKKTEKIGIISGMEILKNTRPIQDIPFRTGSFSDKRKKREKVTKNNYYKWI
Ga0224423_1003656463300021431Cattle And Sheep RumenMSNKKKSQKVGIIRGIDLLKSSRPIQDIPFRTGVYSDKRKKREKINKNKLDKWL
Ga0224423_1016716463300021431Cattle And Sheep RumenITVGTIKGIDVIRQTKPIQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0224423_1023177243300021431Cattle And Sheep RumenMAKKKNIAVGTIKGIDVIRQTKPIQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0224423_1024607013300021431Cattle And Sheep RumenMAKKKNITVGTIKGIDVIRQTKPIQDIPFRTGVYTDKR
Ga0257076_1071390013300024269Goat FecesEMAKKKNIKVGTISGIDVLRQTRPPQDIPFRTGSYTDKRKKRKK
Ga0257076_1222008233300024269Goat FecesMAKKKNIKVGTISGIDVLRQTRPPQDIPFRTGSYTDKRKKREKINKNR
Ga0257091_1157194433300024270Goat FecesMAKKKNIKVGTISGIDVLRQTRPPQDIPFRTGSYTDKRKKRE
Ga0256870_1005059143300026525RumenMSKKKNITVGTIKGIDIVRQTKPIQDIPFRTGVYTDKRKKREKVTKRNMDRWM
Ga0256404_1000389763300026549RumenMGKKKKTIHVSTISGLDLIKKSRGMQDIPFRTGVYSDKRKKREKVNKNNLDKWL
Ga0256404_1006265193300026549RumenMKKKKTEKVGTIKGLDILKNTKPIQDIPFRTGVYSDKRKKREKVNKNKLDKWL
Ga0256404_103133263300026549RumenMSKRKKKENIGTITALDALKASQPIQDIPFRTGAYKNKKHYKREKINKNRLDKWL
Ga0247611_10003798113300028591RumenMAKKKNISVGTIKGIDVIRQTKPIQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0247611_1008140533300028591RumenMAKKKKVEKVGTIKAIDMIHASRPMQDIPFRTGSYSDKRKKREKVNKRNYERFL
Ga0247611_1108365823300028591RumenMANKKKSERIGTINGLEILKQTRPSQDIPFRTGSFKDKRKKREKINKNHLDKWL
Ga0247611_1119749433300028591RumenMAKKKKAKTIGTIEAIVLIEKSRPIQDIPFRTGVYKDKRKKREKINRNNIDKYL
Ga0247611_1202918323300028591RumenTLREGVEMAKKKNISVGTISGLDVLRQTRPPQDIPFRTGSYTDKRKKREKINKNRLDKWL
Ga0265301_10000969663300028797RumenMAKKKKIEKVGTIKAIDIIHASRPIQDIPFRTGAHENKKYKREKINKRNYEKYL
Ga0265301_10002205213300028797RumenMAKKKKTEKVGTIKTIDMIHASRPMQDIPFRTGVYSDKRKKREKINKNRLDKWL
Ga0265301_10003491193300028797RumenMANKKKTQTIGTIKGIDVLRQTRPMQDIPFRTGAYTDKRKKREKINKNRLDKWL
Ga0265301_10004499133300028797RumenMKKEVIGVIRGKDLLKNSRGIQDIPFRTGTYKDKRKKREKVNKNNFEKWL
Ga0265301_1000890253300028797RumenMANKKKTEKIGTIKAIDTIHATRPIQDIPFRTGAHISKKHKREKVNKRNFEKYV
Ga0265301_1001885563300028797RumenMKKKKTEKVGIISGIEILKNTRPIQDIPFRTGVYSDKRKKREKVNKRNYDKWL
Ga0265301_1010898733300028797RumenMAKKKNIKVGTISGLDILKQTRPPQDIPFKTGSYTDKRKKREKINKNRLDKWL
Ga0265301_1022412313300028797RumenMANKKKTQTIGTIKGIDVLRQTRPMQDIPFRTGAHVDKRKKREKVNKNRLDKWL
Ga0265301_1056319823300028797RumenMAKKKKVEKVGTIKAIDMIHASRPIQDIPFRTGVYTDKRKKREKVTKRNMDKWM
Ga0247608_1033419913300028805RumenMAKKKKIEKVGTIKAIDMIHASRPIQDIPFRTGAHENKKYKREKVNKKNYEKFL
Ga0247608_1116289313300028805RumenMAKKKNISVGTIKGIDVIRQTKPIQDIPFRTGAYTDKRKKREKVNKNRLDKWL
Ga0247608_1170403623300028805RumenMKKKKTEKIGTIKGIEVLKNTRPIQDIPFRTGVYSDKRKKREKVNKNKLEKWL
Ga0265298_1076576213300028832RumenMAKKKNIKVGTISGLDILKQTRPPQDIPFKTGSYTDKRK
Ga0247610_1000046533300028833RumenMANKKKSERIGTINGLEILKQTRPPQDIPFRTGSFKDKRKKREKVNKRNYDKYL
Ga0247610_1010105973300028833RumenMAKKKKVEKVGTIKAIDTLRQTRPMQDIPFRIGAHENKKYKREKINKNRLDKWL
Ga0247610_1022251243300028833RumenMGKRKNIKVGTIKGIEILKNTRPMQDIPFRTGVYSDKRKKREKVNKNKLEKWL
Ga0247610_1030298953300028833RumenMSKKKNITVGTIKGIDIVRQTKPMQDIPFRTGVYTDKRKKREKINKNRLDKWL
Ga0247610_1106957023300028833RumenMSNKKKAETIGTIKGIDLIKKSKPIQDIPFRTGVYTDKRKKREKVNKRNYDRFL
Ga0247610_1161338913300028833RumenMGKRKNIKVGTIKGIEILKNTRPMQDIPFRTGVHSDKRKKREKVNKNKL
Ga0256407_10012267103300028886RumenMANKKKTIYVGTINGLDLLKKSREPEYVPFRTGAYKDKRKKREKVNKRNYDKYL
Ga0256407_1002381573300028886RumenMKKKKTEKVGTIKGLDILKNTRPIQDIPFRTGVHSDKRKKREKVNKNKLDKWL
Ga0256407_1050254813300028886RumenMANKKKTIHIGTINGLDLLKKSREPEYVPFRTGAYKDKRKKREKVNKRNYDKYL
Ga0265299_1093130923300028887RumenMAKKKKVEKVGTIKAIDMIHASRPMQDIPFRTGAHENKKYKREKVNKNRLDKWM
Ga0265299_1168774923300028887RumenMANKKKNITVGTIKGIDVIRQTKPTQDIPFRTGVHTDKRKKREKVNKRNMDRWM
Ga0247609_10003577163300028888RumenMKKKVETIGIISGADLLKKSRPIQDIPFRTGVYQNKKKKREKVNKNYLDKWM
Ga0247609_10007890173300028888RumenMPKKKVEKIGVIKGTDLLKNNRGIQDIPFRTGVYSDKRKKRQKINRNNIEKFL
Ga0247609_10008597123300028888RumenMKKKKTEKIGTIKGMDILKNTRPMQDIPFRTGVYPDKRKKREKVNKNKLEKWL
Ga0247609_1004536683300028888RumenMSKKKTITVGTIKGIDLIKATKPIQEISFRTGYYTDKRKKREKVTVRNMDKWL
Ga0247609_1042974843300028888RumenMAKKKKSVHVATIKGLDVLKATRGIQDIPFRTGVYTDKRKKREKVNKNNLDKWL
Ga0247609_1061550023300028888RumenMAKKKNITIGTIKGIDLIKQTKPIQDIPFRTGVYTDKRKKREKVNKRNMDKWM
Ga0247609_1075545033300028888RumenEKIGTIKAIDMIHTSRPIQDIPFRMGSHSDKRKKREKVNKRNYEKFL
Ga0247609_1192126823300028888RumenMAKKKKNIEVGIIRGMDIVRQTKPIQDIPFRTGVYTDKRKKREKVNKNRLDKWL
Ga0265300_1009888923300028914RumenMKKKKIEKVGTINGMEILKNTRPIQDIPFRTGVYSDKRKKREKVNKNKLEKWL
Ga0061013_1274874733300030772Fungi-Associated Bovine RumenMAKKKKVEKVGTIKAIDMIHASRPMQDIPFRTGVYKDKRKKREKINKNKLDKWL
Ga0326513_10000491643300031760RumenMAKKKKVEKVGTIKAIDMIHTSRPIQDIPFRTGAYENKKYKREKVNKKNYEKFL
Ga0326513_1002466563300031760RumenMSKKKNIIVGTIRGIDIIRQTKPMQDIPFRTGVYTDKRKKREKVTKRNMDRWM
Ga0326513_1002939343300031760RumenMAKKKNIKVGTISGLDVLKQTRPPQDIPFKTGSYTDKRKKREKINKNRLDKWL
Ga0326513_1004062733300031760RumenMAKKKNIKVGTINGLDILKQTRPPQDIPFRTGSYTDKRKKREKINKNRLDKWL
Ga0326513_1017848043300031760RumenMAKKKKTEKVGTIKAIDMIHASRPIQDIPFRTGAHVNKKYKREKVNKRNYDKYM
Ga0326513_1047039323300031760RumenMAKKKKVEKVGTIKAIDTLRQTRPIQDIPFRTGAHENKKYKREKINKNRLDKWL
Ga0326514_10001630123300031853RumenMAKKKKKESIGTIKAIDTLRQTRPIQDIPFRTGIHENRKYKREKVNKKNYEKFL
Ga0326514_1089676823300031853RumenMSKKKNIIVGTIRGIDIIRQTKPMQDIPFRTGVYTDKRKK
Ga0326514_1114647523300031853RumenMANKKKTIHVGTINGLDLLKKSREPEYVPFRTGAYKDKRKKREKVNKRNYDKYL
Ga0326514_1131119323300031853RumenMAKKKNIKVGTINGLDVLKQTRPPQDIPFRTGSYTDKKKKREKINKNRLDKWL
Ga0326511_10004483133300031867RumenMAKKKKIEKVGTIKAIDTLRQTRPMQDIPFRTGAHENKKYKREKINKNRLDKWL
Ga0326511_1018896033300031867RumenMAKKKKIEKVGTIKAIDTLRQTRPIQDIPFRTGVHENKKYKREKINKNRLDKWL
Ga0326511_1019635533300031867RumenMAKKKKVEKIGTIKAIDTLRQTRPIQDIPFRTGAHENKKYKREKINKNRLDKWL
Ga0326511_1054390823300031867RumenMANKKKSERIGTINGLEILKQTRPPQDIPFRTGSFKDKKKKREKVNKRNYDKWL
Ga0310694_1038243543300031992RumenMGKRKNIKVGTIKGIEILKNTRPMQDIPFRTGVYSD
Ga0310694_1069715313300031992RumenMAKKKKIEKIGTIKAIDMLHASRPIQDIPFRTGAHDNKKRKREKVNKN
Ga0310696_1211368223300031993RumenTEVIGVINGLDLLKKSREPQDIPFRTGGYVDKRKKREKVNKRNYDKYL
Ga0310691_1140755813300031994RumenMAKKKNITVGTIRGIDIVRQTKPIQDIPFRTGSYTDKRKKREKINKNRLDKWL
Ga0310786_1038579023300031998RumenMAKKKSIRVGTISGIDILKQTRPPQDIPFRTGSYTDKRKKREKVNKNRLDKWL
Ga0310695_1006043623300032007RumenMKKKKTEKVGTIKGLDILKNTRPIQDIPFRTGVYSDKRKKREKVNKNKLDKWL
Ga0310697_1075222013300032030RumenGIISGADLLKKSRPIQDIPFRTGVYQNKKKKREKVNKNYLDKWM
Ga0310697_1164072713300032030RumenMAKKKKVEKIGTIKAIDMIHTSRPIQDIPFRMGSHSDKRKKREKVNKRNYEKFL
Ga0326512_10002615113300032038RumenMAKKKKVEKVGTIKAIDTLRQTRPMQDIPFRTGAHENKKYKREKVNKKNYEKFL
Ga0326512_1081954413300032038RumenMAKKKKVEKVGTIKAIDMIRTSRPIQDIPFRTGAHVNKKYKREKVNKRNYDKYM
Ga0326512_1090864823300032038RumenMANKKKSERIGTINGLEILKQTRPPQDIPFRTGSFKDKRKKREKVNKHNYDKYL
Ga0224413_1116188833300032167Goat FecesMAKKKNIKVGTISGIDVLRQTRPPQDIPFRTGSYTDKRKKKEKINKNRLDKWL
Ga0310690_1006698313300033463RumenMAKKKKVEKVGTIKAIDMIHASRPMQDIPFRTGAHENKKYKREKVNKNRLDK
Ga0310690_1048977433300033463RumenMAKKKKVEKVGTIKAIDMIHASRPMQDIPFRTGVYTDKRKKREKVTKRNMDKWM
Ga0310690_1072276113300033463RumenMAKKKNIKVGTISGLDVLKQTRPPQDIPFRTGSYTDKRKKREKVNKNRLDKWL


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