Metagenome / Metatranscriptome Family F060880

Basic Information
Family ID	F060880
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	58 residues
Representative Sequence	MRTSADFRKTQRRRAELRSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAR
Number of Associated Samples	116
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.42 %
% of genes near scaffold ends (potentially truncated)	36.36 %
% of genes from short scaffolds (< 2000 bps)	74.24 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (90.152 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (11.364 % of family members)
Environment Ontology (ENVO)	Unclassified (28.030 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.939 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 89.09% β-sheet: 0.00% Coil/Unstructured: 10.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00126	HTH_1	53.03
PF00027	cNMP_binding	15.91
PF13545	HTH_Crp_2	6.06
PF00083	Sugar_tr	3.79
PF07690	MFS_1	2.27
PF07238	PilZ	2.27
PF13505	OMP_b-brl	0.76
PF00535	Glycos_transf_2	0.76
PF12860	PAS_7	0.76
PF13442	Cytochrome_CBB3	0.76
PF11294	DUF3095	0.76
PF01242	PTPS	0.76
PF03958	Secretin_N	0.76
PF00494	SQS_PSY	0.76
PF02743	dCache_1	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.76
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.76
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.15 %
Unclassified	root	N/A	9.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.15 %
Unclassified	root	N/A	9.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.15 %
Unclassified	root	N/A	9.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.97 %
Unclassified	root	N/A	9.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.70 %
Unclassified	root	N/A	9.85 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	38.64 %
Unclassified	root	N/A	9.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.85 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	7.58 %
Phreatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae	4.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.85 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	7.58 %
Phreatobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter	4.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.85 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	7.58 %
Phreatobacter stygius	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	4.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.85 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	7.58 %
Phreatobacter stygius	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	4.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_1135099	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
2170459014\|G1P06HT02GW137	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
2228664021\|ICCgaii200_c0817930	All Organisms → cellular organisms → Bacteria	2971	Open in IMG/M
3300000041\|ARcpr5oldR_c000045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22863	Open in IMG/M
3300000787\|JGI11643J11755_11720656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1672	Open in IMG/M
3300002070\|JGI24750J21931_1000741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4643	Open in IMG/M
3300002075\|JGI24738J21930_10002642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4625	Open in IMG/M
3300003234\|JGI26301J46818_10217	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300003371\|JGI26145J50221_1031441	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300003911\|JGI25405J52794_10002765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3041	Open in IMG/M
3300003995\|Ga0055438_10010218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1898	Open in IMG/M
3300004070\|Ga0055488_10003607	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300004114\|Ga0062593_100734174	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300004114\|Ga0062593_101511486	Not Available	724	Open in IMG/M
3300004463\|Ga0063356_103866618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	645	Open in IMG/M
3300004479\|Ga0062595_100001948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4914	Open in IMG/M
3300005093\|Ga0062594_100508336	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005159\|Ga0066808_1021094	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005161\|Ga0066807_1003248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1311	Open in IMG/M
3300005162\|Ga0066814_10064559	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005206\|Ga0068995_10020659	All Organisms → cellular organisms → Bacteria → Proteobacteria	1017	Open in IMG/M
3300005288\|Ga0065714_10348023	Not Available	638	Open in IMG/M
3300005290\|Ga0065712_10005039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3247	Open in IMG/M
3300005293\|Ga0065715_10234251	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300005331\|Ga0070670_100103455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2453	Open in IMG/M
3300005332\|Ga0066388_100246408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2424	Open in IMG/M
3300005332\|Ga0066388_101441455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300005332\|Ga0066388_101922509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1057	Open in IMG/M
3300005332\|Ga0066388_104769482	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005332\|Ga0066388_105574985	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005335\|Ga0070666_10010399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5820	Open in IMG/M
3300005337\|Ga0070682_100976746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	701	Open in IMG/M
3300005339\|Ga0070660_100546629	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005343\|Ga0070687_100765458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300005353\|Ga0070669_100676290	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005365\|Ga0070688_100722940	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005440\|Ga0070705_100070124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2116	Open in IMG/M
3300005456\|Ga0070678_101485392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	634	Open in IMG/M
3300005466\|Ga0070685_10004887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6780	Open in IMG/M
3300005466\|Ga0070685_10144601	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300005468\|Ga0070707_100887672	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005518\|Ga0070699_100680854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	939	Open in IMG/M
3300005526\|Ga0073909_10176784	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005526\|Ga0073909_10202735	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005535\|Ga0070684_100259399	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300005544\|Ga0070686_100024223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3636	Open in IMG/M
3300005616\|Ga0068852_102470191	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005713\|Ga0066905_100924054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	765	Open in IMG/M
3300005937\|Ga0081455_10000007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	269394	Open in IMG/M
3300006579\|Ga0074054_11758104	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300006755\|Ga0079222_10049131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1947	Open in IMG/M
3300006804\|Ga0079221_10972866	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006806\|Ga0079220_10522923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	818	Open in IMG/M
3300006854\|Ga0075425_100313004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1807	Open in IMG/M
3300009098\|Ga0105245_11107790	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300009156\|Ga0111538_10022083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8311	Open in IMG/M
3300010046\|Ga0126384_10674459	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300010047\|Ga0126382_11072571	Not Available	712	Open in IMG/M
3300010359\|Ga0126376_11130993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	793	Open in IMG/M
3300010362\|Ga0126377_10054068	All Organisms → cellular organisms → Bacteria	3512	Open in IMG/M
3300010362\|Ga0126377_10294740	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300010362\|Ga0126377_12246799	Not Available	622	Open in IMG/M
3300010373\|Ga0134128_10004664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16740	Open in IMG/M
3300010375\|Ga0105239_10251687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1984	Open in IMG/M
3300010396\|Ga0134126_11845401	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300010400\|Ga0134122_10358996	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300011119\|Ga0105246_10061419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2615	Open in IMG/M
3300012883\|Ga0157281_1086872	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012896\|Ga0157303_10014821	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012899\|Ga0157299_10095081	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300012909\|Ga0157290_10146138	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300012916\|Ga0157310_10022938	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300012943\|Ga0164241_10974071	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300013297\|Ga0157378_10316039	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300014269\|Ga0075302_1169269	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300014308\|Ga0075354_1001434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2625	Open in IMG/M
3300014320\|Ga0075342_1128319	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300015371\|Ga0132258_10089508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7211	Open in IMG/M
3300015371\|Ga0132258_11035279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2075	Open in IMG/M
3300015371\|Ga0132258_11607474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1640	Open in IMG/M
3300015372\|Ga0132256_102642034	Not Available	602	Open in IMG/M
3300015372\|Ga0132256_102878552	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300015372\|Ga0132256_103812794	Not Available	507	Open in IMG/M
3300015374\|Ga0132255_105571787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	533	Open in IMG/M
3300019356\|Ga0173481_10004539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3651	Open in IMG/M
3300019356\|Ga0173481_10007638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2966	Open in IMG/M
3300019361\|Ga0173482_10001042	All Organisms → cellular organisms → Bacteria	5354	Open in IMG/M
3300019362\|Ga0173479_10002236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4357	Open in IMG/M
3300022893\|Ga0247787_1020630	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300022898\|Ga0247745_1022053	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300025223\|Ga0207672_1008344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	609	Open in IMG/M
3300025538\|Ga0210132_1006926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1491	Open in IMG/M
3300025560\|Ga0210108_1077005	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300025907\|Ga0207645_10552408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	781	Open in IMG/M
3300025912\|Ga0207707_10359833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1253	Open in IMG/M
3300025923\|Ga0207681_10030623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3509	Open in IMG/M
3300025925\|Ga0207650_10058078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2880	Open in IMG/M
3300025926\|Ga0207659_11138905	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300025931\|Ga0207644_10726103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	829	Open in IMG/M
3300025932\|Ga0207690_10248030	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300025932\|Ga0207690_11089071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phreatobacteraceae → Phreatobacter → Phreatobacter stygius	666	Open in IMG/M
3300025941\|Ga0207711_11737245	Not Available	567	Open in IMG/M
3300025961\|Ga0207712_10129034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1924	Open in IMG/M
3300025962\|Ga0210070_1029306	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300026078\|Ga0207702_10000297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	57296	Open in IMG/M
3300026116\|Ga0207674_11683720	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300026733\|Ga0207550_101737	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300026742\|Ga0207597_102405	Not Available	627	Open in IMG/M
3300026767\|Ga0207469_101048	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026803\|Ga0207549_102096	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300026894\|Ga0207980_1012065	Not Available	558	Open in IMG/M
3300026952\|Ga0207434_1002170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1377	Open in IMG/M
3300026995\|Ga0208761_1000029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3303	Open in IMG/M
3300027178\|Ga0207606_102968	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300027400\|Ga0207560_101347	Not Available	850	Open in IMG/M
3300027422\|Ga0207611_100480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	707	Open in IMG/M
3300027474\|Ga0207457_101795	Not Available	552	Open in IMG/M
3300027479\|Ga0207636_1000047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1582	Open in IMG/M
3300027526\|Ga0209968_1028470	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300027646\|Ga0209466_1088663	Not Available	625	Open in IMG/M
3300027665\|Ga0209983_1144794	Not Available	544	Open in IMG/M
3300027682\|Ga0209971_1141098	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027717\|Ga0209998_10153756	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300027821\|Ga0209811_10179728	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1000185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8786	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10006198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3088	Open in IMG/M
3300031538\|Ga0310888_10335099	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300031538\|Ga0310888_10603663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	666	Open in IMG/M
3300031716\|Ga0310813_11275396	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031944\|Ga0310884_10041620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2011	Open in IMG/M
3300033412\|Ga0310810_10379694	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300033475\|Ga0310811_10010971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11720	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.39%
Host-Associated	Host-Associated	34.85%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.85%
Plants	Host-Associated → Plants	34.85%
Aquatic	Environmental → Aquatic	4.55%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Marine	Environmental → Aquatic → Marine	4.55%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.42%
Loam	Environmental → Terrestrial → Soil → Loam	13.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.06%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.27%
Sand	Environmental → Terrestrial → Soil → Sand	1.52%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	15.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.30%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	11.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.30%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.27%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300003234	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-D	Environmental	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025223	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes)	Host-Associated	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025962	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026733	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026742	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5w-12 (SPAdes)	Environmental	Open in IMG/M
3300026767	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A1-11 (SPAdes)	Environmental	Open in IMG/M
3300026803	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026894	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA (SPAdes)	Environmental	Open in IMG/M
3300026952	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027178	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027400	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027422	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A1-10 (SPAdes)	Environmental	Open in IMG/M
3300027474	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09.2A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4w-11 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0895.00000190	2162886007	Switchgrass Rhizosphere	MEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
2PV_01949290	2170459014	Switchgrass, Maize And Mischanthus Litter	KTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
ICCgaii200_08179302	2228664021	Soil	MRTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIEFAAH
ARcpr5oldR_00004513	3300000041	Arabidopsis Rhizosphere	MRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
JGI11643J11755_117206562	3300000787	Soil	MRTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIEFAAH*
JGI24750J21931_10007411	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	HTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
JGI24738J21930_100026421	3300002075	Corn Rhizosphere	YPISKMEVAMHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
JGI26301J46818_102171	3300003234	Soil	MEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
JGI26145J50221_10314412	3300003371	Arabidopsis Thaliana Rhizosphere	KLEVAMRTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIEFAAH
JGI25405J52794_100027659	3300003911	Tabebuia Heterophylla Rhizosphere	RQRRRADLHRHSEAAVATIWLVFYVVGIAVVLSTPIISRALEVAAR*
Ga0055438_100102182	3300003995	Natural And Restored Wetlands	VRTSADFRKTQRRQAKFYSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAR*
Ga0055488_100036072	3300004070	Natural And Restored Wetlands	VSIPEPVLPISKMEVAVRTSADFRKTQRRQAKFYSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAR*
Ga0062593_1007341742	3300004114	Soil	MRTSADSRKMQRRREELRSHSEAAVATIWLVFYVLGLAVAASSPIISGAIELAAH*
Ga0062593_1015114862	3300004114	Soil	MRTSADFRKTQQRRAELRSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIEFAAH*
Ga0063356_1038666181	3300004463	Arabidopsis Thaliana Rhizosphere	MEVAMRTSADFRKTQRRRAELHGRSEAAVATIWLVFYVLGLAVAVSSPIVSRA
Ga0062595_1000019485	3300004479	Soil	MHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
Ga0062594_1005083363	3300005093	Soil	HTSADFRKTQRRRAELHSRSEAAVATIGLVFYVLGLAVAVSSPIVSRVIELAAH*
Ga0066808_10210942	3300005159	Soil	SQSLCYPISKMEVAMRTSADFRKTQRRLAELRSRSEAAVATIWLVFYVLGLAIAVSSPIVSRAIELAAH*
Ga0066807_10032482	3300005161	Soil	MRTSADFRKTQRRLAELRSRSEAAVATIWLVFYVLGLAIAVSSPIVSRAIELAAH*
Ga0066814_100645591	3300005162	Soil	SPCYPISKMEVAMRISADFRKTQRRRAELRSRSEAAVATIWLVFYTLGIAVAVSSPIISRAIELAAH*
Ga0068995_100206592	3300005206	Natural And Restored Wetlands	VSIPEPVLPISKMEVAMRTSADFRKTQSRQAELHSRSEAAVATIWLVFYVLGLAVAVSSPIVLRAIELAARQV*
Ga0065714_103480232	3300005288	Miscanthus Rhizosphere	MRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0065712_100050392	3300005290	Miscanthus Rhizosphere	MEVAMHTSADFRKTQRREELRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH*
Ga0065715_102342512	3300005293	Miscanthus Rhizosphere	MHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH*
Ga0070670_1001034556	3300005331	Switchgrass Rhizosphere	MHTSADFRKTQRREELRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH*
Ga0066388_1002464087	3300005332	Tropical Forest Soil	MRTSFDFRKRQRRRADLHRNSEAAVATIWLVFYVLGIVVVVSSPILSRAIELAAH*
Ga0066388_1014414553	3300005332	Tropical Forest Soil	MRTSVDFRKRQRRRADLHRHSEAAVATIWLVFYVLGIVVVVSSPLISRALEIAAR*
Ga0066388_1019225092	3300005332	Tropical Forest Soil	MRTSVDFRKRQRRRADLRRHSEAAVATIWLVFYVVGIAVVLSTPIISRALEVAAR*
Ga0066388_1047694821	3300005332	Tropical Forest Soil	MEVAMRTPIDFRKRQRRRAELHRHSEAAVATIWLVFYVLGIVVVVSSPILSRAIELAAH*
Ga0066388_1055749852	3300005332	Tropical Forest Soil	MEVAMRTSVDFRKRQRRRADLHRRSEAAVAAIWLVFYVVGIAIVLSTPIISRALEVAAR*
Ga0070666_100103991	3300005335	Switchgrass Rhizosphere	CYPISKMEVAMHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
Ga0070682_1009767461	3300005337	Corn Rhizosphere	MRPSVDFRKSQRRQAELRSRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH*
Ga0070660_1005466291	3300005339	Corn Rhizosphere	YPISKMEVAMRPSVDFRKSQRRQAELRSRSEAAVATIWLVFYVLGLVVVVSSPIVSRAIELAAH*
Ga0070687_1007654582	3300005343	Switchgrass Rhizosphere	MHTSADFRKTQRRRAELHSRSEAAVATIGLVFYVLGLAVAVSSPIVSRVIELAAH*
Ga0070669_1006762903	3300005353	Switchgrass Rhizosphere	AMHTSADFRKTQRRRAELHSRSEAAVATIGLVFYVLGLAVAVSSPIVSRVIELAAH*
Ga0070688_1007229401	3300005365	Switchgrass Rhizosphere	MEVAMHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH*
Ga0070705_1000701242	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEVAMRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0070678_1014853921	3300005456	Miscanthus Rhizosphere	VDFRKSQRRQAELRSRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH*
Ga0070685_100048879	3300005466	Switchgrass Rhizosphere	MEVAMHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
Ga0070685_101446011	3300005466	Switchgrass Rhizosphere	CYPISKMEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0070707_1008876723	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEVAMHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
Ga0070699_1006808542	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSADFRKTQQRRAELRSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIEFAA
Ga0073909_101767843	3300005526	Surface Soil	SADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0073909_102027351	3300005526	Surface Soil	TSADFRKTQRRLAELRSRSEAAVATIWLVFYVLGLAIAVSSPIVSRAIELAAH*
Ga0070684_1002593995	3300005535	Corn Rhizosphere	TSADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0070686_1000242238	3300005544	Switchgrass Rhizosphere	SQSPCYPISKMEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0068852_1024701912	3300005616	Corn Rhizosphere	ISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0066905_1009240542	3300005713	Tropical Forest Soil	MRTPIDFRKRQRRRAELHRHSEAAVATIWLVFYVLGIVVVVSSPILSRAIELAAH*
Ga0081455_10000007142	3300005937	Tabebuia Heterophylla Rhizosphere	MRSSVDFRKRQRRRADLHRHSEAAVATIWLVFYVVGIAVVLSTPIISRALEVAAR*
Ga0074054_117581041	3300006579	Soil	MRTSADFRKTQRRLAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0079222_100491315	3300006755	Agricultural Soil	MGISADFRKTRRRREEWRNHSEAVVATLWLVFYALGLTVAVSSPIVSRALELAAH*
Ga0079221_109728662	3300006804	Agricultural Soil	FEMEVAMGISADFRKTRRRREEWRNHSEAVVATLWLVFYALGLTVAVSSPIVSRALELAAH*
Ga0079220_105229232	3300006806	Agricultural Soil	MKTSADFRKTRRRRAESDGYSEAAVATIWLVFYALGVVIAGSSPIVSRAFELAAHQ*
Ga0075425_1003130042	3300006854	Populus Rhizosphere	MSEMEVAMRTSIDFRKRQRRWAEFHRQSEAAVATIWLVFYVVGIVVAVSSPIVSRALELATH*
Ga0105245_111077901	3300009098	Miscanthus Rhizosphere	YPISKMEVAMRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0111538_1002208313	3300009156	Populus Rhizosphere	MEVAMRTSIDFRKMQRRRAELHRHSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH*
Ga0126384_106744592	3300010046	Tropical Forest Soil	MEVAMRTSVDFRKRQRRRADLRRHSEAAVATIWLVFYVLGIVVVVSSPILSRAIELAAH*
Ga0126382_110725711	3300010047	Tropical Forest Soil	MEVAMRTSVDFRKRQRRRADLRRHSEAAVATIWLVFYVVGIAVVLSTPIISRALEVAAR*
Ga0126376_111309931	3300010359	Tropical Forest Soil	MEVAMRPSVDFRKSQRRQAELRSRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH*
Ga0126377_100540683	3300010362	Tropical Forest Soil	MEAAMRTSVDFRKKQRRRADLHRHSEAAVATIWLVFYVLGVVVVVSSPLVSRALELAAR*
Ga0126377_102947401	3300010362	Tropical Forest Soil	MEIAMRTSVDFRKRQRRRADLRRHSEAAVATIWLVFYVVGIAVVLSTPIISRALEVAAR*
Ga0126377_122467991	3300010362	Tropical Forest Soil	MEVAMRTSIEFQKARRKRWEFYRRSEAVVATLWLAFYVAAIGVAASSPIISRAIELAGLHP*
Ga0134128_1000466413	3300010373	Terrestrial Soil	MEVAMHTSVDFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
Ga0105239_102516871	3300010375	Corn Rhizosphere	MEVAMHTSADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIEL
Ga0134126_118454011	3300010396	Terrestrial Soil	PISKMEVAMHTSADFRKTQRRRAELHSRSEAAVATIGLVFYVLGLAVAVSSPIVSRVIELAAH*
Ga0134122_103589961	3300010400	Terrestrial Soil	MEVAMRTSVDFRKTQRRRAELRSHSEAVVATIWLVFYVLGLAVAVSSPIISRAIELAAH*
Ga0105246_100614191	3300011119	Miscanthus Rhizosphere	SKMEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0157281_10868721	3300012883	Soil	MEVAMHTSADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0157303_100148211	3300012896	Soil	MEVAMHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLAVAASSPIISGAIELAAH*
Ga0157299_100950811	3300012899	Soil	PCYPISIMEVAMHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH*
Ga0157290_101461381	3300012909	Soil	SQSPCYPISKMEVAMRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0157310_100229381	3300012916	Soil	SPCYPISKMEVAMRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAK*
Ga0164241_109740712	3300012943	Soil	SPCLPQSPCYLISKMEVAMRTSVDFRKTQRRRADLHGRPEAAVATIWLVFYVLGLVVAVSSPIVSRAIEFAAH*
Ga0157378_103160392	3300013297	Miscanthus Rhizosphere	MEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIEPAAQ*
Ga0075302_11692692	3300014269	Natural And Restored Wetlands	MRTSADFRKTQRRRAELRSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAR*
Ga0075354_10014344	3300014308	Natural And Restored Wetlands	MEVAMRTSADFRKTQSRQAELHSRSEAAVATIWLVFYVLGLAVAVSSPIVLRAIELAAH*
Ga0075342_11283191	3300014320	Natural And Restored Wetlands	MEVAVRTSADFRKTQRRQAKFYSRSEAAVATIWLVFCVLGLAVAVSSPIVSRAIELAAR*
Ga0132258_100895082	3300015371	Arabidopsis Rhizosphere	MEVAMRTSADFRKTQRRLAELRSRSEAAVATIWLVFYVLGLAIAVSSPIVSRAIELAAH*
Ga0132258_110352792	3300015371	Arabidopsis Rhizosphere	MEVAMRTSADFRKTQRRQAELHNRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH*
Ga0132258_116074741	3300015371	Arabidopsis Rhizosphere	MEVAMRTSVDFRKRQRRRADLHRHSEAAVATLWLVFYVLGIVVVVSSPLVSRAIELAAH*
Ga0132256_1026420341	3300015372	Arabidopsis Rhizosphere	MEVAMRTSADFRKTQRRLAELRSRSEAAVATIWLVFYVLGIAVAVSSPIISRAIELAAQ*
Ga0132256_1028785522	3300015372	Arabidopsis Rhizosphere	SIMEVAMHTSADFRKTQRREELRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH
Ga0132256_1038127941	3300015372	Arabidopsis Rhizosphere	MEVAMHTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGLAGVVSSPIVSRAIELAAH*
Ga0132255_1055717871	3300015374	Arabidopsis Rhizosphere	MEVAMRTSADFRKTQRRQAELHSRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH*
Ga0173481_100045393	3300019356	Soil	MRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0173481_100076385	3300019356	Soil	MHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH
Ga0173482_100010424	3300019361	Soil	MEVAMRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0173479_100022363	3300019362	Soil	MRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0247787_10206301	3300022893	Soil	SPCPSQRACYPISKMEVAMHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH
Ga0247745_10220532	3300022898	Soil	MRTSADSRKMQRRREELRSHSEAAVATIWLVFYVLGLAVAASSPIISGAIELAAH
Ga0207672_10083442	3300025223	Corn, Switchgrass And Miscanthus Rhizosphere	MEVAMHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH
Ga0210132_10069262	3300025538	Natural And Restored Wetlands	VSIPEPVLPISKMEVAVRTSADFRKTQRRQAKFYSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAR
Ga0210108_10770051	3300025560	Natural And Restored Wetlands	TQRRQAKFYSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAR
Ga0207645_105524081	3300025907	Miscanthus Rhizosphere	VFIPEPVLPISKMEVAMHTSADFRKTQRRRAELHSRSEAAVATIGLVFYVLGLAVAVSSPIVSRVIELAAH
Ga0207707_103598332	3300025912	Corn Rhizosphere	MRPSVDFRKSQRRQAELRSRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH
Ga0207681_100306231	3300025923	Switchgrass Rhizosphere	SSPCPSQSPCYPISKMEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0207650_100580785	3300025925	Switchgrass Rhizosphere	MHTSADFRKTQRREELRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH
Ga0207659_111389051	3300025926	Miscanthus Rhizosphere	MHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH
Ga0207644_107261031	3300025931	Switchgrass Rhizosphere	MHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLTVAISSPIISRA
Ga0207690_102480301	3300025932	Corn Rhizosphere	DFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0207690_110890713	3300025932	Corn Rhizosphere	SRSPCYPISKMEVAMRPSVDFRKSQRRQAELRSRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH
Ga0207711_117372452	3300025941	Switchgrass Rhizosphere	MEVAMHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAAH
Ga0207712_101290343	3300025961	Switchgrass Rhizosphere	MEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYELGIAVAVSSPIISRAIELAAQ
Ga0210070_10293062	3300025962	Natural And Restored Wetlands	VSIPEPVLPISKMEVAMRTSADFRKTQSRQAELHSRSEAAVATIWLVFYVLGLAVAVSSPIVLRAIELAARQV
Ga0207702_1000029721	3300026078	Corn Rhizosphere	MHTSADFRKTQRRRAELRSQSEAAVATIWLVFYELGLVVAVSSPIVSRALEFAAH
Ga0207674_116837201	3300026116	Corn Rhizosphere	MEVAMRPSVDFRKSQRRQAELRSRSEAAVATIWLVFYVLGLAVVVSSPIVSRAIELAAH
Ga0207550_1017371	3300026733	Soil	MRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIVSRALEFAAH
Ga0207597_1024052	3300026742	Soil	MHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFA
Ga0207469_1010481	3300026767	Soil	MHTSADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0207549_1020961	3300026803	Soil	MHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGIAVAVSSPIVSRALEFAAH
Ga0207980_10120651	3300026894	Soil	MEVAMRTSADFRKTQRRLAELRSRSEAAVATIWLVFYVLGLAIAVSSPIVSRAIELAAH
Ga0207434_10021705	3300026952	Soil	QSPCYPISKMEVAMRISADFRKTQRRRAELHSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0208761_10000292	3300026995	Soil	MEVAMRISADFRKTQRRRAELRSRSEAAVATIWLVFYTLGIAVAVSSPIISRAIELAAH
Ga0207606_1029682	3300027178	Soil	MRTSADSRKMQRRREELRSHSEAAVATIWLVFYVLGLVVAVSSPIVSRALEFAAH
Ga0207560_1013472	3300027400	Soil	MRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIVSRALEFAAH
Ga0207611_1004802	3300027422	Soil	MHTSADFRKTQRRRAELRSRSEAAVATIWLVFYVLGLVVAVSSPIVSRAIEFAA
Ga0207457_1017951	3300027474	Soil	MHTSADFRKTQRRRAELRSQSEAAVATIWLVFYVLGLVVAVSSPIVS
Ga0207636_10000473	3300027479	Soil	MHTSADFRKTQRRRAELRSRSEAMVATIWLVSYVLGIAVAVSSPIISRAIELAAQ
Ga0209968_10284702	3300027526	Arabidopsis Thaliana Rhizosphere	MRTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0209466_10886631	3300027646	Tropical Forest Soil	MRTSVDFRKRQRRRADLRRHSEAAVATIWLVFYVVGIAVVLSTPIISRALEVAAR
Ga0209983_11447941	3300027665	Arabidopsis Thaliana Rhizosphere	MRTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGIAVAVSSPIISRA
Ga0209971_11410981	3300027682	Arabidopsis Thaliana Rhizosphere	FRKTQRRLAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0209998_101537561	3300027717	Arabidopsis Thaliana Rhizosphere	AMRTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIEFAAH
Ga0209811_101797282	3300027821	Surface Soil	MHTSADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
(restricted) Ga0255311_10001854	3300031150	Sandy Soil	MRTSADFRKTQRRRAELHSRSEAAVAIIWLVFYVLGLAVAVSSPFVSRAIELAAH
(restricted) Ga0255310_100061982	3300031197	Sandy Soil	MRTSADFRKTQRRRAELHSRSEAAVATIWLVFYVLGLAVAVSSPFVSRAIELAAH
Ga0310888_103350992	3300031538	Soil	MRTSADFRKTQRRLAELRSRSEAAVATIWLVFYVLGLAIAVSSPIVSRAIELAAH
Ga0310888_106036631	3300031538	Soil	MHTSADFRKTQRREDLRRHSEAAVATIWLVFYVLGLTVAISSPIISRAIELAA
Ga0310813_112753962	3300031716	Soil	MEVAMRTSADFRKTQRRRAELHGRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAH
Ga0310884_100416206	3300031944	Soil	SQSPCYPISKMEVAMRISADFRKTQRRRAELRSRSEAMVATIWLVFYVLGIAVAVSSPIISRAIELAAQ
Ga0310810_103796944	3300033412	Soil	MEVAMRTSADFRKTQRRRADLHIRSEAAVATIWLVFYVLGLAVAVSSPIVSRAIELAAH
Ga0310811_100109719	3300033475	Soil	MRTSADFRKTQRRRAELHSRSEAVVATIWLVFYVLGLAVAVSSPIVSRAIELAAH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters