Metagenome / Metatranscriptome Family F060269

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060269
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	75 residues
Representative Sequence	MTCRVEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL
Number of Associated Samples	113
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.75 %
% of genes near scaffold ends (potentially truncated)	36.09 %
% of genes from short scaffolds (< 2000 bps)	84.21 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.489 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.579 % of family members)
Environment Ontology (ENVO)	Unclassified (33.083 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.105 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.61% β-sheet: 31.37% Coil/Unstructured: 49.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00903	Glyoxalase	2.26
PF02909	TetR_C_1	1.50
PF00535	Glycos_transf_2	1.50
PF13377	Peripla_BP_3	0.75
PF00561	Abhydrolase_1	0.75
PF09261	Alpha-mann_mid	0.75
PF02517	Rce1-like	0.75
PF12762	DDE_Tnp_IS1595	0.75
PF16901	DAO_C	0.75
PF13683	rve_3	0.75
PF12760	Zn_Tnp_IS1595	0.75
PF07730	HisKA_3	0.75
PF01391	Collagen	0.75
PF01370	Epimerase	0.75
PF12833	HTH_18	0.75
PF02482	Ribosomal_S30AE	0.75
PF08962	Rv2632c-like	0.75
PF00872	Transposase_mut	0.75
PF03640	Lipoprotein_15	0.75
PF13466	STAS_2	0.75
PF01609	DDE_Tnp_1	0.75
PF13586	DDE_Tnp_1_2	0.75
PF00118	Cpn60_TCP1	0.75
PF01636	APH	0.75
PF01596	Methyltransf_3	0.75
PF13592	HTH_33	0.75
PF00496	SBP_bac_5	0.75
PF03976	PPK2	0.75
PF02358	Trehalose_PPase	0.75
PF09957	VapB_antitoxin	0.75
PF13408	Zn_ribbon_recom	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	1.50
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.75
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.75
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.75
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.75
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.75
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.75
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.75
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.75
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.75
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.75
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.75
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.75
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	0.75
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.75
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.75
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.75
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.75
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.75
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.75
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.49 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.49 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.49 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.97 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.22 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.70 %
Unclassified	root	N/A	4.51 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	68.42 %
Unclassified	root	N/A	4.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	63.91 %
Unclassified	root	N/A	4.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %

Name	Rank	Taxonomy	Distribution
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	61.65 %
Unclassified	root	N/A	4.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.51 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.51 %
Pseudonocardia sp. HH130630-07	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. HH130630-07	0.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111007\|2215259127	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2338	Open in IMG/M
3300002568\|C688J35102_118518481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	567	Open in IMG/M
3300004643\|Ga0062591_102626722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	531	Open in IMG/M
3300005045\|Ga0071328_163737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3449	Open in IMG/M
3300005045\|Ga0071328_169766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2292	Open in IMG/M
3300005045\|Ga0071328_175726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2454	Open in IMG/M
3300005337\|Ga0070682_100208838	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300005338\|Ga0068868_100318792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1324	Open in IMG/M
3300005366\|Ga0070659_100573611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	967	Open in IMG/M
3300005434\|Ga0070709_11332117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	580	Open in IMG/M
3300005439\|Ga0070711_100624109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	901	Open in IMG/M
3300005535\|Ga0070684_100980603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	793	Open in IMG/M
3300005548\|Ga0070665_101511719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	680	Open in IMG/M
3300005615\|Ga0070702_100194769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1337	Open in IMG/M
3300005615\|Ga0070702_101372788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	577	Open in IMG/M
3300005841\|Ga0068863_101602463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	660	Open in IMG/M
3300005842\|Ga0068858_101028455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	808	Open in IMG/M
3300005843\|Ga0068860_100540357	Not Available	1167	Open in IMG/M
3300006173\|Ga0070716_100964928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	672	Open in IMG/M
3300006573\|Ga0074055_11726169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	754	Open in IMG/M
3300006606\|Ga0074062_12323182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300006755\|Ga0079222_10027245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2389	Open in IMG/M
3300006755\|Ga0079222_12113602	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006880\|Ga0075429_101451441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	597	Open in IMG/M
3300006953\|Ga0074063_14289594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	972	Open in IMG/M
3300006954\|Ga0079219_10045127	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300007076\|Ga0075435_101537336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	584	Open in IMG/M
3300007521\|Ga0105044_10230346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1833	Open in IMG/M
3300009084\|Ga0105046_11205894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300009148\|Ga0105243_10878850	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300009840\|Ga0126313_11614100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	540	Open in IMG/M
3300010042\|Ga0126314_10650463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	771	Open in IMG/M
3300010044\|Ga0126310_11664280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	529	Open in IMG/M
3300010375\|Ga0105239_10633959	Not Available	1220	Open in IMG/M
3300010403\|Ga0134123_11001380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	851	Open in IMG/M
3300011411\|Ga0153933_1024315	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300012004\|Ga0120134_1094799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	555	Open in IMG/M
3300012088\|Ga0153944_1064816	Not Available	721	Open in IMG/M
3300012212\|Ga0150985_102978925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300012212\|Ga0150985_109628806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2337	Open in IMG/M
3300012212\|Ga0150985_110304694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1770	Open in IMG/M
3300012212\|Ga0150985_111600525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2204	Open in IMG/M
3300012469\|Ga0150984_100423587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	817	Open in IMG/M
3300012469\|Ga0150984_118821053	Not Available	524	Open in IMG/M
3300012469\|Ga0150984_119668271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1614	Open in IMG/M
3300012677\|Ga0153928_1027077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. HH130630-07	1246	Open in IMG/M
3300012901\|Ga0157288_10104649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	775	Open in IMG/M
3300012908\|Ga0157286_10418911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	524	Open in IMG/M
3300012910\|Ga0157308_10359095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	553	Open in IMG/M
3300012924\|Ga0137413_10000046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27779	Open in IMG/M
3300012957\|Ga0164303_10213778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1078	Open in IMG/M
3300012958\|Ga0164299_10167132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1236	Open in IMG/M
3300012961\|Ga0164302_10512815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	849	Open in IMG/M
3300012984\|Ga0164309_10582351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	871	Open in IMG/M
3300012986\|Ga0164304_10774569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	737	Open in IMG/M
3300012987\|Ga0164307_11427162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	584	Open in IMG/M
3300013308\|Ga0157375_12106000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300013832\|Ga0120132_1019454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1189	Open in IMG/M
3300014325\|Ga0163163_10274505	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300015199\|Ga0167647_1035520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1443	Open in IMG/M
3300015201\|Ga0173478_10728370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	534	Open in IMG/M
3300015371\|Ga0132258_10463041	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300015374\|Ga0132255_101618604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	981	Open in IMG/M
3300017965\|Ga0190266_10865872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	588	Open in IMG/M
3300018000\|Ga0184604_10073243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1005	Open in IMG/M
3300018066\|Ga0184617_1015489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1613	Open in IMG/M
3300018081\|Ga0184625_10393807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	715	Open in IMG/M
3300018422\|Ga0190265_10028129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4620	Open in IMG/M
3300018422\|Ga0190265_10099585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2720	Open in IMG/M
3300018431\|Ga0066655_10105276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1589	Open in IMG/M
3300018432\|Ga0190275_10431692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300018432\|Ga0190275_11883368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	677	Open in IMG/M
3300018466\|Ga0190268_10025557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2006	Open in IMG/M
3300018466\|Ga0190268_10722433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	736	Open in IMG/M
3300018466\|Ga0190268_11453557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300018469\|Ga0190270_10807916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	945	Open in IMG/M
3300018476\|Ga0190274_12346033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	631	Open in IMG/M
3300018920\|Ga0190273_10088647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1695	Open in IMG/M
3300018920\|Ga0190273_10967232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	698	Open in IMG/M
3300019269\|Ga0184644_1431875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	521	Open in IMG/M
3300019377\|Ga0190264_10264730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1010	Open in IMG/M
3300019767\|Ga0190267_10122384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1082	Open in IMG/M
3300019767\|Ga0190267_11554662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	514	Open in IMG/M
3300019889\|Ga0193743_1000884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23233	Open in IMG/M
3300021086\|Ga0179596_10001201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6761	Open in IMG/M
3300021976\|Ga0193742_1096398	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300022756\|Ga0222622_10563382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	820	Open in IMG/M
3300025321\|Ga0207656_10507996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	612	Open in IMG/M
3300025900\|Ga0207710_10034248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2231	Open in IMG/M
3300025906\|Ga0207699_10999209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	618	Open in IMG/M
3300025909\|Ga0207705_11325020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	549	Open in IMG/M
3300025915\|Ga0207693_10672669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300025926\|Ga0207659_11426097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	593	Open in IMG/M
3300025927\|Ga0207687_11857769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	515	Open in IMG/M
3300025986\|Ga0207658_11286660	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300026142\|Ga0207698_12674411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	508	Open in IMG/M
3300027738\|Ga0208989_10163065	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300027823\|Ga0209490_10005364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11692	Open in IMG/M
3300028578\|Ga0272482_10098691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	825	Open in IMG/M
3300028592\|Ga0247822_10746807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	794	Open in IMG/M
3300028596\|Ga0247821_10382359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300028704\|Ga0307321_1094540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	603	Open in IMG/M
3300028705\|Ga0307276_10208190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	516	Open in IMG/M
3300028707\|Ga0307291_1133599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	628	Open in IMG/M
3300028714\|Ga0307309_10060330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	844	Open in IMG/M
3300028714\|Ga0307309_10114676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	655	Open in IMG/M
3300028744\|Ga0307318_10371178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	505	Open in IMG/M
3300028771\|Ga0307320_10337905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	601	Open in IMG/M
3300028778\|Ga0307288_10108138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1019	Open in IMG/M
3300028811\|Ga0307292_10281114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	695	Open in IMG/M
3300028872\|Ga0307314_10175404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	633	Open in IMG/M
3300028885\|Ga0307304_10178655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	899	Open in IMG/M
3300030006\|Ga0299907_11120982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	570	Open in IMG/M
3300030336\|Ga0247826_10412261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1001	Open in IMG/M
3300030988\|Ga0308183_1060946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	782	Open in IMG/M
3300030993\|Ga0308190_1133253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	576	Open in IMG/M
3300031452\|Ga0272422_1153506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	752	Open in IMG/M
3300031731\|Ga0307405_11056873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	696	Open in IMG/M
3300031852\|Ga0307410_10974387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	730	Open in IMG/M
3300031939\|Ga0308174_10231314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1426	Open in IMG/M
3300031995\|Ga0307409_100346571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300031996\|Ga0308176_11762212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	661	Open in IMG/M
3300032002\|Ga0307416_100801250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1038	Open in IMG/M
3300032002\|Ga0307416_101349963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	819	Open in IMG/M
3300032080\|Ga0326721_11020134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	530	Open in IMG/M
3300033551\|Ga0247830_10918439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	698	Open in IMG/M
3300034142\|Ga0334959_051087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	664	Open in IMG/M
3300034268\|Ga0372943_0007707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5534	Open in IMG/M
3300034384\|Ga0372946_0001912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	9468	Open in IMG/M
3300034384\|Ga0372946_0027114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2530	Open in IMG/M
3300034384\|Ga0372946_0245850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	865	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.93%
Host-Associated	Host-Associated	27.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.92%
Plants	Host-Associated → Plants	24.81%
Aquatic	Environmental → Aquatic	6.02%
Fungi	Host-Associated → Fungi	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.02%
Freshwater	Environmental → Aquatic → Freshwater	3.01%
Sediment	Environmental → Aquatic → Sediment	3.01%
Mycelium	Host-Associated → Fungi → Mycelium	2.26%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.75%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.89%
Loam	Environmental → Terrestrial → Soil → Loam	9.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.01%
Ice	Environmental → Aquatic → Freshwater → Ice	2.26%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	2.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.01%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.01%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	2.26%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.01%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.01%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	2.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.26%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.26%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	2.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.75%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.75%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111007	Cave microbial community (Dry rock wall)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009084	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly)	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031452	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand nord	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034142	Biocrust microbial communities from Mojave Desert, California, United States - 55SNC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2214340869	2209111007	Speleothem And Rock Wall Surfaces	MGCRIEVFVRSGHTIDLSLEDGEDRVFTSALHEAWASPEAIGFKHLALGENAAILATEVVGYRLHGSVEKGSAPR
C688J35102_1185184811	3300002568	Soil	MTCRIEVFVRSGHTIDLALEDGEDREFITALHEAWASPESIGEFTCLALGEDAVVLASEVVGYRLHGSIRPEATRL*
Ga0062591_1026267222	3300004643	Soil	VTCRIEVFVRSGHTIDLSLEDGEDRAFVTALHSAWAAPTPTDELTYLTLGENAAVLVNEVVGYRIHGTVQPDARRL*
Ga0071328_1637372	3300005045	Permafrost	MTCRVEVFVRSGHTIDLALEDGEDRVFANALHEAWASPDAIGFRHLALGGNAVILASEVVGYRLHGSSLKGSAL*
Ga0071328_1697661	3300005045	Permafrost	EVFVRSGHTIDLALEDGEDRVFANSLHEAWASPDAMGFMHLALGEYAVVLASEVIGYRLHGSTSEDSGL*
Ga0071328_1757264	3300005045	Permafrost	CRVEVFVRSGHTIDLALEDGEDRTFANALHEAWASPDAIAFKHLALGENAVILASEVVGYRLHPSIRQGSAM*
Ga0070682_1002088383	3300005337	Corn Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSV
Ga0068868_1003187921	3300005338	Miscanthus Rhizosphere	VFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEMPSRPR*
Ga0070659_1005736112	3300005366	Corn Rhizosphere	VACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL*
Ga0070709_110676181	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MARPRHRAAGTNSERAAGELLRSLEGAPSAVYARPVTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSTL*
Ga0070709_113321171	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPL*
Ga0070713_1000882993	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LRSLEGAPSAVYARPVTCRLEVFVRSGHTIDLALEDGRRSGLRHRLHEAWASPDAIEFKHLALGQHAVILAGEVVGCRIHGSLRTSSAL*
Ga0070711_1006241092	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSTL*
Ga0070684_1009806032	3300005535	Corn Rhizosphere	VTCRIEVFVRSGHTIDLSLEEPEDRAFVTALHSAWASPTPTDELTYLTLGENAAVLVNEVVGYRLHGTVPPDTRRL*
Ga0070665_1015117192	3300005548	Switchgrass Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPR*
Ga0070702_1001947692	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0070702_1013727882	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	WLYARAMTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPR*
Ga0068863_1016024632	3300005841	Switchgrass Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEMPSRPR*
Ga0068858_1010284551	3300005842	Switchgrass Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVE*
Ga0068860_1005403571	3300005843	Switchgrass Rhizosphere	FYARAMTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPR*
Ga0070716_1009649281	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SALAVPRRRRPLRSTLARVTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSTL*
Ga0074055_117261691	3300006573	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRAFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPL*
Ga0074062_123231822	3300006606	Soil	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRIHGSVRPASAL*
Ga0079222_100272453	3300006755	Agricultural Soil	GHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAMILAGEVVGYRLHGSVRRGSAL*
Ga0079222_121136022	3300006755	Agricultural Soil	GHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL*
Ga0075429_1014514412	3300006880	Populus Rhizosphere	MTCRVEVFVRSGHTVDLALEDGEDRIFADALHEAWVSPDAIAFKHLALGGDAVILASEVVGYRLHGPMKD*
Ga0074063_142895942	3300006953	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRAFTDALHEAWTSPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTSR*
Ga0079219_100451273	3300006954	Agricultural Soil	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHDAWASPDATEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL*
Ga0075435_1015373362	3300007076	Populus Rhizosphere	RPVTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0105044_102303461	3300007521	Freshwater	MTCRIEVFVRSGHTIDMALEDGEDRVFTDALREAWASPDAIGIKHLALGQNAVILAAEVVGYRLHGSLRSGSAL*
Ga0105046_112058942	3300009084	Freshwater	MTCRIEVFVRSGHTIDMALEDGEDRVFTDALREAWASPDAIGIKHLALGQNAVILAAEVV
Ga0105243_108788502	3300009148	Miscanthus Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHSSVEKPSRPL*
Ga0126313_116141002	3300009840	Serpentine Soil	MTCRVEVFVRSGHTIDLALEDGEDRVFADGLHEAWASPDAIGYKHLPLGENAAILASEVVGYRLHGSILQESAM*
Ga0126314_106504632	3300010042	Serpentine Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAQALREAWASPEAIEFTHLALGENAVILVSEVVGYRFHGTLPKSSTL*
Ga0126310_116642801	3300010044	Serpentine Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAQALREAWASPEAIEFAHLALGANAVILASEVVGYRFHGTLPKSSTL*
Ga0105239_106339592	3300010375	Corn Rhizosphere	DLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL*
Ga0134123_110013801	3300010403	Terrestrial Soil	VACSLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0153933_10243153	3300011411	Attine Ant Fungus Gardens	FVRSGHTLELLLQDGEDRVFTEALHEAWASPEATEFKPLALGDNAVILASEVVGYRLHGAEEAGRAPI*
Ga0120134_10947991	3300012004	Permafrost	MKCRIEVFVRSGHTIDLSLEDGEDRVFTAALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSEERPSTPL*
Ga0153944_10648162	3300012088	Attine Ant Fungus Gardens	MTCRIEVFVRSGHTLELLLQDGEDRVFTEALREAWASPEATEFKPLALGDNAVILASEVVGYRLHGAEEAGRAPI*
Ga0150985_1029789251	3300012212	Avena Fatua Rhizosphere	VTCRIEVFVRSGHTIDLSLEEGEDRAFVTALHSAWASPTPNDELTYLTLGENAAVLVNEVVGYRLHGTVPPDARRL*
Ga0150985_1096288063	3300012212	Avena Fatua Rhizosphere	HTIDLALEDGEDREFITALHEAWASPESIGEFTCLALGEDAVVLASEVVGYRLHGSIRPEATGL*
Ga0150985_1103046943	3300012212	Avena Fatua Rhizosphere	LQYYGGDVTSRIEVFVRSGHTIDLSLEDGEDRAFVTALHSAWASPTPTDELTYLTLGENAAVLVNEVVGYRLHGTVPPDARRL*
Ga0150985_1116005252	3300012212	Avena Fatua Rhizosphere	VSCRSFVRSGHTIDLALEDGEDRTFAQALHEAWASPEAIDFAHLALGANAVILASEVVGYRFHGTLPKSSTL*
Ga0150984_1004235873	3300012469	Avena Fatua Rhizosphere	VRSGHTIDLALEDGEDREFITALHEAWASPESIGEFTCLALGEDAVVLASEVVGYRLHGSIRPEATRL*
Ga0150984_1188210531	3300012469	Avena Fatua Rhizosphere	IEVFVRSGHTIDLSLEEGEDRAFVTALHSAWASPTPNDELTYLTLGENAAVLVNEVVGYRLHGTVPPDARRL*
Ga0150984_1196682711	3300012469	Avena Fatua Rhizosphere	VTCRIEVFVRSGHTIDLSLEDGEDRAFVTALHSAWAAPTPTDELTYLTLGENAAVLVNEVVGYRLHGTVQPDARRL*
Ga0153928_10270772	3300012677	Attine Ant Fungus Gardens	MTCRIEVFVRSGHTLELLLQDGEDRVFTEALHEAWASPEATEFKPLALGDNAVILASEVVGYRLHGAEEAGRAPI*
Ga0157288_101046491	3300012901	Soil	VACRLEVFVRSGHTIDLALEDGEDRVFVTALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0157286_104189111	3300012908	Soil	MTCRVEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL*
Ga0157308_103590951	3300012910	Soil	VTCRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0137413_1000004610	3300012924	Vadose Zone Soil	MTCRIEVFVRSGHTVDLSLQDGEDRVFTDALHEAWASPDAIGFKHLALGENAAILATEVVGYRLHGLEEPGSAPM*
Ga0164303_102137782	3300012957	Soil	VTCRLEVFVRSGHTIDLALEDGEDRVFVSAMHEAWASPDAIEFKHLSLGQHAVILAGEVVGYRLHGSVRPGSTL*
Ga0164299_101671322	3300012958	Soil	VACRLAVFVRSGHSIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0164302_105128151	3300012961	Soil	VTCRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLSLGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0164309_105823512	3300012984	Soil	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0164304_107745691	3300012986	Soil	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRRGSAL*
Ga0164307_114271621	3300012987	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFSHLALGENAVILAAEVVGYRRHGSVEKPATPL*
Ga0157375_121060002	3300013308	Miscanthus Rhizosphere	VFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0120132_10194543	3300013832	Permafrost	MKCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSEEKPSTPL*
Ga0163163_102745053	3300014325	Switchgrass Rhizosphere	VACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFTHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0167647_10355203	3300015199	Glacier Forefield Soil	MTCRIEVFVRSGHTIDLSLHDGEDRVFVDALHQAWASPEAIGFTALALGENAVILAAEVVGYRRHGPVERGATPL*
Ga0173478_107283701	3300015201	Soil	VACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEYKHLALGQHAVILAGEVVGYRLHGSVRPGSAL*
Ga0132258_104630412	3300015371	Arabidopsis Rhizosphere	VTCRLEVFVRSGHTIDLALEDGEDRMFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRIHGSVRPGSAL*
Ga0132255_1016186042	3300015374	Arabidopsis Rhizosphere	HTIDLALEDGEDRMFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRIHGSVRPGSAL*
Ga0190266_108658721	3300017965	Soil	VARGRDGGSTLCAMTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHSSVEKPSRPL
Ga0184604_100732431	3300018000	Groundwater Sediment	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIELTHLALGANAVILASEVVGYRSTARYRRARRYS
Ga0184617_10154891	3300018066	Groundwater Sediment	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGENAVILASEVVGYRFHGTLLKSSTL
Ga0184625_103938071	3300018081	Groundwater Sediment	RWFYARAMTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPL
Ga0190265_100281297	3300018422	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIGFTHLALGEDAVILASEVVGYRLHGTLLKSSTL
Ga0190265_100995855	3300018422	Soil	PMTCRVEVFVRSGHTIDLALEDGEDRVFANSLHEAWASPDAMGFTYLALGENAVVLASEVVGYRLHGSTSEDSGL
Ga0066655_101052761	3300018431	Grasslands Soil	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDTIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL
Ga0190275_104316921	3300018432	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGENALILASEVVGYRLHGTLLKSSTL
Ga0190275_118833681	3300018432	Soil	MTCRVEVFVRSGHTIDLALEDGEDRSFANALHQAWASPDAIGFKHLALGKNAVILASEVVGYRLHGSRVEDSAM
Ga0190268_100255574	3300018466	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGANAVILASEVVGYRFHGTLPKSSTL
Ga0190268_107224331	3300018466	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGLVEKSPTL
Ga0190268_114535571	3300018466	Soil	RIEVFVRSGHTIDLALEDGEDSAFTTALHEAWTSPGRIEEFTHIALGAHAVVLVNEIVGYRLHGAVRPDTRRL
Ga0190270_108079162	3300018469	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAQELRAAWASPEAIEFTHLALGENAVILVSEVVGYRFHGTLPKSSTL
Ga0190274_123460332	3300018476	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFAHLALGANAVILASEVVGYRLHGTLLKSSTL
Ga0190273_100886471	3300018920	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALRAAWASPEAIEFTHLALGANAVILASEVVGYRFHGTLPKSSTL
Ga0190273_109672322	3300018920	Soil	VSCVCSSKALAETYASPMTCRVEVFVRSGHTIDLALEDGEDRAFAHALREAWASPEAIGFTQLALGANAVILASEVVGYRLHGKLLKSSTL
Ga0184644_14318752	3300019269	Groundwater Sediment	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGENAVILASEVVGYRFHGTLPKSSTL
Ga0190264_102647301	3300019377	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGENAVILASEVVGYR
Ga0190267_101223841	3300019767	Soil	MTCRVEVFVRSGHTIDLALEDGEDRIFAHALREAWASPEAIEFTHLALGANAVILASEVVGYRFHGTLPKSSTL
Ga0190267_115546621	3300019767	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHSSVEKPSRPL
Ga0193743_100088411	3300019889	Soil	MTCRIEVFVRSGHTIDLALQDGEDRVFANALHEAWASPDAIGFKHLALGENAVILATEVVGYRLHGSEEAGSAPM
Ga0179596_100012012	3300021086	Vadose Zone Soil	MTCRIEVFVRSGHTVDLSLQDGEDRVFTDALHEAWASPDAIGFKHLALGENAAILATEVVGYRLHGLEEPGSAPM
Ga0193742_10963981	3300021976	Soil	MTCRIEVFVRSGHTIDLSLQDGEDRLFTDALHEAWASPDAIGFKHLALGENAAILATEVVGYRLHGLEATGSAPM
Ga0222622_105633821	3300022756	Groundwater Sediment	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPR
Ga0207656_105079961	3300025321	Corn Rhizosphere	VACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL
Ga0207710_100342483	3300025900	Switchgrass Rhizosphere	VACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL
Ga0207699_109992091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSTL
Ga0207705_113250201	3300025909	Corn Rhizosphere	IDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL
Ga0207693_106726692	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPL
Ga0207659_114260971	3300025926	Miscanthus Rhizosphere	ACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILASEVVGYRLHGSVRPGSAL
Ga0207687_118577691	3300025927	Miscanthus Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEMPSRPR
Ga0207658_112866601	3300025986	Switchgrass Rhizosphere	RPVACRLEVFVRSGHTIDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL
Ga0207698_126744111	3300026142	Corn Rhizosphere	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEMPSRP
Ga0208989_101630652	3300027738	Forest Soil	MTCRVEVFVRSGHTIDLALEDGEDRAFANALHDVWASPDPIGFTHLSLGEKAVILASEVVGYRLHGSILDHSAL
Ga0209490_100053642	3300027823	Freshwater	MTCRIEVFVRSGHTIDMALEDGEDRVFTDALREAWASPDAIGIKHLALGQNAVILAAEVVGYRLHGSLRSGSAL
Ga0272482_100986912	3300028578	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIGFTHLALGENAVILASEVVGYRLHGTLLKSATL
Ga0247822_107468073	3300028592	Soil	LPMTCRVVVFVRSGHTIDLALEDGEDRSFANALHQAWASPDAIGFKHLALGENAVILASEVVGYRLHGSRVEDSAM
Ga0247821_103823591	3300028596	Soil	PAAVYARPVACRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLSLGQHAVILAGEVVGYRLHGSVRPGSAL
Ga0307321_10945401	3300028704	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGANAVILASEVVGYRFHGTLLKSSTL
Ga0307276_102081902	3300028705	Soil	IVSGRWVSGVCSSKALAETYASPMTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGENAVILASEVVGYRFHGTLLKSSTL
Ga0307291_11335991	3300028707	Soil	IDLALEDGEDRAFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL
Ga0307309_100603301	3300028714	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGENAVILASEVVGYRFHGTLPKS
Ga0307309_101146761	3300028714	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRLFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPR
Ga0307318_103711781	3300028744	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPETIGFTHLALGENAVILASEVVGYRFHGTLLKSSTL
Ga0307320_103379051	3300028771	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLVLGANAVILASEVVGYRFHGTLPKSSTL
Ga0307288_101081382	3300028778	Soil	ERDCWSRGGRGIVSRRWVSCVCSSKALAETYASPMTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFTHLALGENAVILASEVVGYRFHGTLLKSSTL
Ga0307292_102811141	3300028811	Soil	RRPLRSTLARVTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL
Ga0307314_101754041	3300028872	Soil	MTCRVEVFVRSGHTIDLALEDGEDRTFAQALRAAWASPEAIEFTHLALGENAVILASEVV
Ga0307304_101786551	3300028885	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGKNAVILAAEVVGYRRHGSVEKPPTPR
Ga0299907_111209821	3300030006	Soil	RVSSLCSLKAAAESYALPMTCRVEVFVRSGHTIDLALEDGEDRVFADGLHEAWASPDAIGYKHLPLGENAAILASEVVGYRLHGSILQESAM
Ga0247826_104122612	3300030336	Soil	VACRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRRGSAL
Ga0308183_10609462	3300030988	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRAFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHGSVEKPSTPL
Ga0308190_11332532	3300030993	Soil	MTCRIEVFVRSGHTIDLSLEDGEDRLFTDALHEAWASPKAIGFTQLALGKNAVILAAEVVGYRRHGSVEKPSTPR
Ga0272422_11535061	3300031452	Rock	MTCRIEVFVRSGHTIDLALQDGEDRSFTDALHRAWASPEPVGFTHLALGENAVILASEVVGYRLHGAAPKDPPQG
Ga0307405_110568731	3300031731	Rhizosphere	KALAETYASPMTCRVEVFVRSGHTIDLALEDGEDRTFAQALREAWASPEAIEFAHLALGANAVILASEVVGYRFHGTLPKSSTL
Ga0307410_109743872	3300031852	Rhizosphere	MTCRIEVFVRSGHTIDLALEDGEDREFTTALHQAWASPESIGEFTCLALGENAVVLASEVVGYRLHGSIRPEATRL
Ga0308174_102313142	3300031939	Soil	VTCRLEVFVRSGHTIDLALEDGEDRVFVSALHEAWASPDAIEFKHLALGQHAVILAGEVVGYRLHGSVRPGSAL
Ga0307409_1003465711	3300031995	Rhizosphere	RIRALVSRVCSSKALAETYASPMTCRVEVFVRSGHTIDLALEDGEDRAFAHALREAWASPETIGFTHLALGENAVILASEVVGYRLHGTLPKSSTL
Ga0308176_117622121	3300031996	Soil	RSGHTIDLSLEDGEDRVFTDALHEAWASPEAIGFTQLALGENAVILAAEVVGYRRHSSVEKPSRPL
Ga0307416_1008012502	3300032002	Rhizosphere	MTCRIEVFVRSGHTIDLALEDGEDREFTTALHEAWASPESIGEFTCLALGENAVVLASEVVGYRLHGSIRPEATRL
Ga0307416_1013499631	3300032002	Rhizosphere	EVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIGFTHLALGENAVILASEVVGYRLHGTY
Ga0326721_110201341	3300032080	Soil	SKALAETYASPMTCRVEVFVRSGHTIDLALEDGEDRTFAHALREAWASPEAIEFAHLALGANAVILASEVVGYRFHGTLPKSSTL
Ga0247830_109184392	3300033551	Soil	SERAADQVRLVSKPSAASYALPMTCRVEVFVRSGHTIDLALEDGEDRSFANALHQAWASPDAIGFKHLALGENAVILASEVVGYRLHGSRVEDSAM
Ga0334959_051087_356_580	3300034142	Biocrust	MTSRVEVFVRSGHTIDLALEDGQDRIFANALHEAWASPDAIGFKHLALGENAVILASEVVGYRIHGPMQTDSSM
Ga0372943_0007707_4061_4288	3300034268	Soil	MTCRIEVFVRSGHTMDLALEDGEDRAFAEALHEAWASPGSIGYTILPLGENAAVLAAEVVGYRLHGLVQPDESRL
Ga0372946_0001912_3864_4142	3300034384	Soil	VLIVRASSNPPDSSYAVPMTCRVEVFVRSGHTIDLALEDGEDRAFANALHDVWASPDPIGFTHLSLGEKAVILASEVVGYRLHGSILDHSAL
Ga0372946_0027114_656_883	3300034384	Soil	MTCRIEVFVRSGHTIDLTLRDGEDRVFTNALHEAWATPEAIGFKHLALGENAVILATEVVGYRLHGSQETGSAQM
Ga0372946_0245850_555_779	3300034384	Soil	MTCRVEVFVRSGHTIDLALEDGEDRVFANALHEAWASPDAIGYKPIALGENAVILAAEVVGYRLHGSVLTGSTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060269

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences