3300011910: Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - JXZ_IW_meta

Overview

Basic Information

• IMG/M Taxon OID: 3300011910
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118583 | Gp0137235 | Ga0119893
• Sample Name: Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - JXZ_IW_meta
• Sequencing Status: Permanent Draft
• Sequencing Center: Nanjing University
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 41928486
• Sequencing Scaffolds: 4
• Novel Protein Genes: 4
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	2
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Microbial Communities From Municipal Sewage Treatment Plants In Nanjing, China
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Municipal Sewage Treatment Plants In Nanjing, China

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: China: Nanjing
• Coordinates
  • Lat. (^o): N/A
  • Long. (^o): N/A
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000331	Metagenome / Metatranscriptome	1285	Y
F006296	Metagenome / Metatranscriptome	376	Y
F059945	Metagenome / Metatranscriptome	133	Y
F062748	Metagenome / Metatranscriptome	130	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0119893_100406	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	4676
Ga0119893_108272	Not Available	929
Ga0119893_115060	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	640
Ga0119893_118503	Not Available	570

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0119893_100406	Ga0119893_1004064	F059945	MRSGVHVVCFYMHARRVVSRFDAKGHQELSGYELYESLLTYVAHMDLVGDPLQDTCHARASKILITRIRKILYVGYRRIFP*
Ga0119893_108272	Ga0119893_1082721	F006296	VPRKASEVGACKELEGHIFTIGSGNKGKDGDMLRTSMEKMTTYIGTKFGDKAAQEWISGKKIVPTEPTYSQAIKTRHAARVKATKDRIDLRLRGLTTEKAAIQAELLGSPSDRTLLRELREVEDQLAKAEIELINEVDMKLTEDEKISHANAWRSHRETTESLKKSRGKVYSLLFGQCTQVLVDKMKQVMDWVAISESFDPTLLFKLIEKFVLKQFDNQYATAVLIAEQLSILSFRQDDHLGNAGYYDRFT
Ga0119893_115060	Ga0119893_1150601	F000331	PTTVRNPQANAILERVHQVIGQMLRTAELDMAKSVVPDDVDVFIDNAAWAICSTYHTVLKASPGAAIFGRDMLFDIPFLADWNKIGDYRQSCSVKRENSKRIDYDYKVGDKVLIVKEGILCKAESRYGKEPWTITTVHTNGTIRVQCGSKSERINIRRVTPFSEDII*
Ga0119893_118503	Ga0119893_1185031	F062748	LKAYITIVQERYPTLKYFKVGALKSLPGAKSQYVGHGRKLHSDYPQSVEELEPRFRPVSIIVGLNSFNFMWLNDRTSRESDIRKMTVYPGEMIMFTNHCLHAGGENNTNEEQTRLFAYLASDESHFPSGEVTTWDWQRGDNDPLISKPSSTANTALIRRPGTNQIRLITGRVATSIGRGTDR*