Metagenome / Metatranscriptome Family F053149

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053149
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	97 residues
Representative Sequence	MRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSDW
Number of Associated Samples	102
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.60 %
% of genes near scaffold ends (potentially truncated)	26.95 %
% of genes from short scaffolds (< 2000 bps)	83.69 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.482 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.894 % of family members)
Environment Ontology (ENVO)	Unclassified (23.404 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.681 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.98% β-sheet: 16.67% Coil/Unstructured: 56.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.33.1: Formylmethanofuran:tetrahydromethanopterin formyltransferase	d1ftra2	1ftr	0.67288
e.57.1.1: Vacuolar ATP synthase subunit C	d1u7la_	1u7l	0.64553
d.58.32.4: Cytokinin dehydrogenase 1	d1w1oa1	1w1o	0.62494
d.58.5.0: automated matches	d6mm2a1	6mm2	0.6138
d.58.5.1: Prokaryotic signal transducing protein	d4affa1	4aff	0.60158

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01904	DUF72	57.45
PF13473	Cupredoxin_1	3.55
PF11296	DUF3097	2.84
PF00501	AMP-binding	1.42
PF05378	Hydant_A_N	1.42
PF00857	Isochorismatase	1.42
PF01436	NHL	1.42
PF00753	Lactamase_B	1.42
PF00069	Pkinase	1.42
PF04909	Amidohydro_2	0.71
PF13193	AMP-binding_C	0.71
PF03100	CcmE	0.71
PF00694	Aconitase_C	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	57.45
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.67
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	2.84
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.42
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.42
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.17 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	34.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	34.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.13 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352033\|2206955258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1974	Open in IMG/M
3300000956\|JGI10216J12902_105334691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1203	Open in IMG/M
3300002568\|C688J35102_119176781	Not Available	650	Open in IMG/M
3300003267\|soilL1_10042061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1642	Open in IMG/M
3300004139\|Ga0058897_11158666	Not Available	590	Open in IMG/M
3300005171\|Ga0066677_10395160	Not Available	790	Open in IMG/M
3300005174\|Ga0066680_10042653	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300005175\|Ga0066673_10302453	Not Available	933	Open in IMG/M
3300005178\|Ga0066688_10024542	All Organisms → cellular organisms → Bacteria	3249	Open in IMG/M
3300005179\|Ga0066684_10159830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1435	Open in IMG/M
3300005184\|Ga0066671_10321377	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005187\|Ga0066675_10806022	Not Available	709	Open in IMG/M
3300005406\|Ga0070703_10503210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300005435\|Ga0070714_100952059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300005440\|Ga0070705_100011099	All Organisms → cellular organisms → Bacteria	4532	Open in IMG/M
3300005441\|Ga0070700_101516137	Not Available	570	Open in IMG/M
3300005445\|Ga0070708_100319060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1464	Open in IMG/M
3300005445\|Ga0070708_100882388	Not Available	840	Open in IMG/M
3300005454\|Ga0066687_10324757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300005458\|Ga0070681_10037628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4855	Open in IMG/M
3300005458\|Ga0070681_11737080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300005467\|Ga0070706_100045004	All Organisms → cellular organisms → Bacteria	4077	Open in IMG/M
3300005468\|Ga0070707_100554874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1111	Open in IMG/M
3300005468\|Ga0070707_101230363	Not Available	715	Open in IMG/M
3300005468\|Ga0070707_101936586	Not Available	557	Open in IMG/M
3300005529\|Ga0070741_10005253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28947	Open in IMG/M
3300005529\|Ga0070741_10011700	All Organisms → cellular organisms → Bacteria	16111	Open in IMG/M
3300005529\|Ga0070741_10062852	All Organisms → cellular organisms → Bacteria	4292	Open in IMG/M
3300005529\|Ga0070741_10175147	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300005549\|Ga0070704_101847099	Not Available	559	Open in IMG/M
3300005554\|Ga0066661_10058259	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300005561\|Ga0066699_10205898	Not Available	1372	Open in IMG/M
3300005564\|Ga0070664_101640842	Not Available	609	Open in IMG/M
3300005614\|Ga0068856_101500407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300006032\|Ga0066696_10008495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4867	Open in IMG/M
3300006800\|Ga0066660_11028630	Not Available	659	Open in IMG/M
3300006894\|Ga0079215_10283994	Not Available	902	Open in IMG/M
3300006918\|Ga0079216_10444609	Not Available	833	Open in IMG/M
3300006918\|Ga0079216_11513812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300006954\|Ga0079219_11270575	Not Available	645	Open in IMG/M
3300007004\|Ga0079218_10047879	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300007004\|Ga0079218_10479013	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300007004\|Ga0079218_11430031	Not Available	741	Open in IMG/M
3300009012\|Ga0066710_100328889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2251	Open in IMG/M
3300009012\|Ga0066710_103855939	Not Available	562	Open in IMG/M
3300009177\|Ga0105248_12788884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300010137\|Ga0126323_1140198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300010145\|Ga0126321_1421840	Not Available	510	Open in IMG/M
3300010400\|Ga0134122_10422093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300011120\|Ga0150983_11890867	Not Available	599	Open in IMG/M
3300012200\|Ga0137382_10539179	Not Available	831	Open in IMG/M
3300012202\|Ga0137363_11093716	Not Available	678	Open in IMG/M
3300012212\|Ga0150985_100767637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300012212\|Ga0150985_101144600	Not Available	535	Open in IMG/M
3300012212\|Ga0150985_101465402	Not Available	505	Open in IMG/M
3300012212\|Ga0150985_102619144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300012212\|Ga0150985_105864153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300012212\|Ga0150985_113972519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300012389\|Ga0134040_1123653	Not Available	549	Open in IMG/M
3300012400\|Ga0134048_1001251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300012406\|Ga0134053_1052579	Not Available	610	Open in IMG/M
3300012469\|Ga0150984_103328900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300012469\|Ga0150984_111075964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300012927\|Ga0137416_11212565	Not Available	680	Open in IMG/M
3300012927\|Ga0137416_11494602	Not Available	613	Open in IMG/M
3300012929\|Ga0137404_10055279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3059	Open in IMG/M
3300012929\|Ga0137404_10756917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	881	Open in IMG/M
3300012944\|Ga0137410_10897141	Not Available	749	Open in IMG/M
3300012977\|Ga0134087_10383038	Not Available	680	Open in IMG/M
3300013307\|Ga0157372_11872316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300014150\|Ga0134081_10378572	Not Available	526	Open in IMG/M
3300015371\|Ga0132258_13879669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300018071\|Ga0184618_10332593	Not Available	648	Open in IMG/M
3300018082\|Ga0184639_10583107	Not Available	551	Open in IMG/M
3300018422\|Ga0190265_10564360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1255	Open in IMG/M
3300018422\|Ga0190265_11661616	Not Available	749	Open in IMG/M
3300018422\|Ga0190265_12436243	Not Available	623	Open in IMG/M
3300018422\|Ga0190265_13196816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300018429\|Ga0190272_10327860	Not Available	1204	Open in IMG/M
3300018429\|Ga0190272_11156480	Not Available	756	Open in IMG/M
3300018429\|Ga0190272_11307654	Not Available	721	Open in IMG/M
3300018429\|Ga0190272_11345885	Not Available	714	Open in IMG/M
3300018433\|Ga0066667_10865825	Not Available	775	Open in IMG/M
3300018465\|Ga0190269_10157005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300018466\|Ga0190268_10200759	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300018466\|Ga0190268_10332302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300018468\|Ga0066662_11358068	Not Available	732	Open in IMG/M
3300019377\|Ga0190264_10102441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300019377\|Ga0190264_10382993	Not Available	902	Open in IMG/M
3300019377\|Ga0190264_10442001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300019458\|Ga0187892_10550918	Not Available	522	Open in IMG/M
3300020070\|Ga0206356_11655217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300020076\|Ga0206355_1420402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300020076\|Ga0206355_1544794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300020170\|Ga0179594_10432659	Not Available	500	Open in IMG/M
3300020181\|Ga0196958_10007721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2989	Open in IMG/M
3300021184\|Ga0196959_10023348	Not Available	1152	Open in IMG/M
3300021184\|Ga0196959_10118331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300021184\|Ga0196959_10186148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300022506\|Ga0242648_1059983	Not Available	597	Open in IMG/M
3300022531\|Ga0242660_1112187	Not Available	679	Open in IMG/M
3300022531\|Ga0242660_1234551	Not Available	517	Open in IMG/M
3300024430\|Ga0196962_10005105	All Organisms → cellular organisms → Bacteria	4086	Open in IMG/M
3300024430\|Ga0196962_10014710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2345	Open in IMG/M
3300025324\|Ga0209640_11408865	Not Available	508	Open in IMG/M
3300025885\|Ga0207653_10375549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300025910\|Ga0207684_11195007	Not Available	630	Open in IMG/M
3300025922\|Ga0207646_11293008	Not Available	637	Open in IMG/M
3300025941\|Ga0207711_11794487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300025944\|Ga0207661_10447757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300025949\|Ga0207667_10814630	Not Available	930	Open in IMG/M
3300026300\|Ga0209027_1195555	Not Available	654	Open in IMG/M
3300026310\|Ga0209239_1226287	Not Available	653	Open in IMG/M
3300026330\|Ga0209473_1278621	Not Available	563	Open in IMG/M
3300026331\|Ga0209267_1220218	Not Available	706	Open in IMG/M
3300026542\|Ga0209805_1401465	Not Available	528	Open in IMG/M
3300027650\|Ga0256866_1013259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2058	Open in IMG/M
3300027886\|Ga0209486_10484386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300028003\|Ga0247707_1024496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300028006\|Ga0247717_1020444	Not Available	1041	Open in IMG/M
3300028536\|Ga0137415_10341398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1301	Open in IMG/M
3300028792\|Ga0307504_10073940	Not Available	1030	Open in IMG/M
3300030006\|Ga0299907_10091537	All Organisms → cellular organisms → Bacteria	2485	Open in IMG/M
3300030006\|Ga0299907_10158371	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300030006\|Ga0299907_11075509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300030997\|Ga0073997_12218393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300031229\|Ga0299913_10064364	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300031548\|Ga0307408_100471069	Not Available	1094	Open in IMG/M
3300031548\|Ga0307408_102141481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300031720\|Ga0307469_10961713	Not Available	795	Open in IMG/M
3300031731\|Ga0307405_11121239	Not Available	677	Open in IMG/M
3300031740\|Ga0307468_100849718	Not Available	785	Open in IMG/M
3300031820\|Ga0307473_10548119	Not Available	789	Open in IMG/M
3300032005\|Ga0307411_11329805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300032180\|Ga0307471_100014723	All Organisms → cellular organisms → Bacteria	5451	Open in IMG/M
3300032180\|Ga0307471_100146237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2263	Open in IMG/M
3300034172\|Ga0334913_147435	Not Available	503	Open in IMG/M
3300034268\|Ga0372943_0036511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2692	Open in IMG/M
3300034268\|Ga0372943_0406326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300034268\|Ga0372943_0735822	Not Available	652	Open in IMG/M
3300034377\|Ga0334931_181916	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.52%
Host-Associated	Host-Associated	13.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.69%
Plants	Host-Associated → Plants	13.48%
Aquatic	Environmental → Aquatic	2.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.38%
Freshwater	Environmental → Aquatic → Freshwater	1.42%
Sediment	Environmental → Aquatic → Sediment	1.42%
Cave	Environmental → Terrestrial → Cave	0.71%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.70%
Loam	Environmental → Terrestrial → Soil → Loam	16.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.96%
Sand	Environmental → Terrestrial → Soil → Sand	4.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.13%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.96%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	4.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.42%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.71%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.26%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	4.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.13%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.13%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.42%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.71%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.71%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352033	Cave microbial community (Wet rock wall)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028003	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-2-E_N	Environmental	Open in IMG/M
3300028006	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-4-E_N	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2208726491	2199352033	Speleothem And Rock Wall Surfaces	MRVVVWGTGVVESRMLWEQAEATEEAAHLAETLSLAWDDVAGPLRWAVEIECPEPDDVLRLVEETSGDDSVLGWSPAPRDVPADWFMVDEDEEENLPLEW
JGI10216J12902_1053346912	3300000956	Soil	MRIVVWGNGIVESRMLWERAESTLEAQHLAENLSLAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGSDW*
C688J35102_1191767811	3300002568	Soil	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWEDIEGLERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPCPRDVPAAWYMAEDTSFGSEW*
soilL1_100420613	3300003267	Sugarcane Root And Bulk Soil	MRIVVWGNGIVESRMLWERGESTLEAQHLAETLSMAWEDLEGLERWAVEIECPDPDDVLKLVEETSADDAVLGWSPAPKEIPAAWFMADEQYLPGADW*
Ga0058897_111586662	3300004139	Forest Soil	MRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0066677_103951602	3300005171	Soil	MRIVVWGNGIVESRMLWERGESTLEAHHLAETLSIAWEDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0066680_100426533	3300005174	Soil	MRIVVWGNGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066673_103024532	3300005175	Soil	MRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPTPKEIPAAWFMSDDAYLPGSEW*
Ga0066688_100245421	3300005178	Soil	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066684_101598302	3300005179	Soil	MRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW*
Ga0066671_103213771	3300005184	Soil	MRIVVWGNGIVESQMLWERGESTLEAQHLAETLSLAWDDLDGLERWALEIECPHPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066675_108060221	3300005187	Soil	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW*
Ga0070703_105032102	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	SGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070714_1009520592	3300005435	Agricultural Soil	MRIVVWGNGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLPGSDW*
Ga0070705_1000110995	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKE
Ga0070700_1015161371	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGADW*
Ga0070708_1003190602	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGVGAVESGMLWERAASTEDACLVAETLSLAWDDVEGPERWAVEIECADPDEVLRLVEETSGDDAVLGWSPAPKEIPTSWFMADEAENRW*
Ga0070708_1008823881	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MWGKGTVMRIVVWGSGIVESRMLWERGESTLEAHSVAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPTAWYMSDDASLPGSDW*
Ga0066687_103247571	3300005454	Soil	IVESRMLWQRGEATLEAQSLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070681_100376284	3300005458	Corn Rhizosphere	MRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLHGSDW*
Ga0070681_117370802	3300005458	Corn Rhizosphere	SGESTLEAQHLAETLSMAWEDIDGLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPATWFMADEPFTPGADW*
Ga0070706_1000450041	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070707_1005548742	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDVEGLDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070707_1012303632	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGVGAVESGMLWARAEGTDDARQVAETLSLAWDDVEGPERWAVEIECADPDDVLRLVEETSGDDAVLGWSPAPKEIPTSWFMTDEAENLW*
Ga0070707_1019365862	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MWGKGTVMRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPTAWFMSDDASLPGSDW*
Ga0070741_1000525311	3300005529	Surface Soil	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW*
Ga0070741_100117009	3300005529	Surface Soil	MRIVVWGNGIVESRMLWERGESTLEARHLAETLSLAWDDLGGLERWALEVECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDASLPGSDW*
Ga0070741_100628525	3300005529	Surface Soil	MRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLPGSDW*
Ga0070741_101751473	3300005529	Surface Soil	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSMAWDDIEGIDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGADW*
Ga0070704_1018470991	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGNGIVESRMLWERGECTLEAQHLAESLSMAWEDLEGLERWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0066661_100582591	3300005554	Soil	GIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066699_102058981	3300005561	Soil	MRIVVWGSGIVESRMLWERGESTLEAHHLAETLSIAWEDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSD
Ga0070664_1016408421	3300005564	Corn Rhizosphere	VDKTIRLGSGGVPREKGPAMRIVVWGNGIVESRMLWERAESTLEAQHLAETLSLAWEDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGSDW*
Ga0068856_1015004071	3300005614	Corn Rhizosphere	MRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066696_100084951	3300006032	Soil	IVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0066660_110286301	3300006800	Soil	MRIVVWGSGIVESRMLWERGESSLEAHHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMGEDTSFGNDW*
Ga0079215_102839942	3300006894	Agricultural Soil	MRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW*
Ga0079216_104446091	3300006918	Agricultural Soil	MRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWEDIEGLDRWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAAHQGNDW*
Ga0079216_115138121	3300006918	Agricultural Soil	MLWERAESSLEAQHLAETLSIAWEDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDASHQGNDW*
Ga0079219_112705751	3300006954	Agricultural Soil	MRIVVWGNGIVESRMLWERGESTLEAHHLAETLSLAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW*
Ga0079218_100478791	3300007004	Agricultural Soil	MRIVVWGSGIVESRMLWERGEATLEAQSLAETLSMAWDDIEGLSRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADESFLPGADW*
Ga0079218_104790131	3300007004	Agricultural Soil	REKGPAMRIVVWGSGIVESRMLWERGEATLEAQNLAETLSMAWDDIEGLNRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW*
Ga0079218_114300313	3300007004	Agricultural Soil	MRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWEDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDA
Ga0066710_1003288892	3300009012	Grasslands Soil	MRIVVWGVGAVESGMLWERAAGTDEARLVAETLSLAWEDVEGPERWAVEIECTDSDDVLRLVEETSGDDAVLGWSPAPKEIPTSWFMADEAENLW
Ga0066710_1038559391	3300009012	Grasslands Soil	MRIVVWGSGIVESRMLWERAESTLEAHNLAETLSIAWEDLGGVERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLGNDW
Ga0105248_127888842	3300009177	Switchgrass Rhizosphere	MRIVVWGQGIVESKMLWERGESTLEAHDLAETLSIAWDDIDGPERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPSAWYMADDAFLQGNDW*
Ga0126323_11401982	3300010137	Soil	MRIVVWGSGIVESRMLWQRGEATLEAQSLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0126321_14218402	3300010145	Soil	MRIVVWGSGIVESRMLWERGETTLEAQHLAETLSMAWDDIEGLSRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFLPGADW*
Ga0134122_104220932	3300010400	Terrestrial Soil	MRIVVWGSGIVESRMLWQRAEATLEAQTLAETLTMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0150983_118908672	3300011120	Forest Soil	GKGTGMRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0137382_105391792	3300012200	Vadose Zone Soil	MRIVVWGSGIVESRMLWERAESTLEAHNLAETLSIAWEDLGGVERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLGNDW*
Ga0137363_110937162	3300012202	Vadose Zone Soil	MRIVVWGSGIVESRMLWERAESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0150985_1007676372	3300012212	Avena Fatua Rhizosphere	MRIVVWGSGIVESRMLWERGETTLEAQHLAETLSLAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDASLPGSEW*
Ga0150985_1011446001	3300012212	Avena Fatua Rhizosphere	MRIVVWGNGIVESRMLWERGESSLEAHHLAETLSMAWDDIDGLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWFMADEPFMPGADW*
Ga0150985_1014654022	3300012212	Avena Fatua Rhizosphere	SGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPATWFMADDASLGNDW*
Ga0150985_1026191441	3300012212	Avena Fatua Rhizosphere	RKGPAMRIVVWGNGIVESRMLWERGESTLEAQHLAETLSMAWEDIEGLERWAVEIECPDPDDVLRLVEETSADDAVLGWSPAPKEIPAAWFMADEHFLPGADW*
Ga0150985_1058641531	3300012212	Avena Fatua Rhizosphere	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSLEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGGEW*
Ga0150985_1139725191	3300012212	Avena Fatua Rhizosphere	EEPAMRIVVWGSGIVESRMLWERGEATLEAHHLAETLSIAWEDIEGIERWALEIECPEPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW*
Ga0134040_11236531	3300012389	Grasslands Soil	PEREEPAMRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0134048_10012511	3300012400	Grasslands Soil	MRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGVDW*
Ga0134053_10525792	3300012406	Grasslands Soil	MRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSADDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0150984_1033289003	3300012469	Avena Fatua Rhizosphere	MRIVVWGSGIVESRMLWERGESTLDAHHLAENLSLAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMGEDAYLGNDW*
Ga0150984_1110759641	3300012469	Avena Fatua Rhizosphere	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWEDIEGLERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW*
Ga0137416_112125652	3300012927	Vadose Zone Soil	MRIVVWGSGIVESKMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYFPGSDW*
Ga0137416_114946022	3300012927	Vadose Zone Soil	MRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW*
Ga0137404_100552792	3300012929	Vadose Zone Soil	MRIVVWGSGIVESRMLWERAESTLDAHHLAETLSIAWEDIEGLKRWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDSYLPGSDW*
Ga0137404_107569172	3300012929	Vadose Zone Soil	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSMEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW*
Ga0137410_108971411	3300012944	Vadose Zone Soil	MRIVVWGSGIVESRMLWERGESSLDAHHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0134087_103830382	3300012977	Grasslands Soil	MRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSD
Ga0157372_118723161	3300013307	Corn Rhizosphere	MRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLPGSDW*
Ga0134081_103785721	3300014150	Grasslands Soil	MRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0132258_138796691	3300015371	Arabidopsis Rhizosphere	MRIVVWGSGIVESRMLWERGVSTLEAEHLAETLSIAWDDIDLFNRWAVEIECPNPDDVLRLVEETSGDDAVLGWSPAPREIPTAWFMADDTFLQGNDW*
Ga0184618_103325932	3300018071	Groundwater Sediment	MRIVVWGNGIVESRMLWERGESTLEATNVAETLSLAWEDIEGLERWALEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAFLPGSDW
Ga0184639_105831071	3300018082	Groundwater Sediment	MRVVVWGTGVMESRMLWEQAQATAEAARLAETLSLAWDDVEGPLRWAVEVECPEPDDVLRLVEETSGDDSVLGWSPAPRDVP
Ga0190265_105643601	3300018422	Soil	MRVVVWGQGVMESRMLWEQAQATEEAARLAETLSLAWDDVDGPLRWAVEVECPEPDDVLRLVEETSGDDAVLGWSPAPRDVPADWFMVDEEEENTSLEW
Ga0190265_116616161	3300018422	Soil	MRIVVWGSGIVESQMLWDRAQSTLEAQHLAESLSLAWEDIEGLDRWAVEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFLSDDAYQGNDW
Ga0190265_124362431	3300018422	Soil	MRVVVWGIGVFESRMLWEDATATAEAAMLAETLSLAWDDIEGPERWAVEVECPESDDVLRLVEETAQDDSVLGWSPAPRTVPADWFMADEDEPVDW
Ga0190265_131968162	3300018422	Soil	WGNGIVESRMLWERGEATLEAQNLAETLSMAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWFMADEPFGADWQ
Ga0190272_103278601	3300018429	Soil	MRIVVWGNGIVESRMLWERAESTLEAQHLAETLSIAWDDIEGLDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWFMADEPFGADW
Ga0190272_111564801	3300018429	Soil	MRVVVWGQGVMESRMLWEQAQATEEAAHLAETLSLAWDDVDGPLRWAVEVECPEPDDVLRLVEETSGDDAVLGWSPAPRDVPADWFLVDEEEENTSLEW
Ga0190272_113076542	3300018429	Soil	MRIVVWGSGIVESRMLWQRAESTLEAHHLAETLSIAWDDIEGLDRWAVEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYQGND
Ga0190272_113458852	3300018429	Soil	MRIVVWGNGIVESRMLWERAEATLEAQNLAETLSMAWDDVEGLNRWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0066667_108658251	3300018433	Grasslands Soil	MRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMGEDSSFGNDW
Ga0190269_101570052	3300018465	Soil	MRIVVWGNGIVESRMLWERAESTLEAMHLAENLSMAWEDLEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADESYGADW
Ga0190268_102007592	3300018466	Soil	MRVVVWGIGAFESRMLWEDATATAEAAMLAETLSLAWDDIEGPERWAVEIECPESDDVLRLVEETAQDDSVLGWSPAPRTVPADWFMADEDEPVD
Ga0190268_103323021	3300018466	Soil	PAMRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADEPFLPGADW
Ga0066662_113580681	3300018468	Grasslands Soil	MRIVVWGSGIVESRMLWQRGESTLEAHHLAETLSLAWDDLERLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0190264_101024412	3300019377	Soil	MRVVVWGIGAFESRMLWEDATATAEAAMLAETLSLAWDDIEGPERWAVEIECPESDDVLRLVEETAQDDSVLGWSPAPRTVPADWFMADEDEPVDW
Ga0190264_103829931	3300019377	Soil	MRIVVWGSGIVESRMVWERGEATLEAQSMAETLSMAWDDIEGLDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0190264_104420011	3300019377	Soil	GPAMRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0187892_105509181	3300019458	Bio-Ooze	MRVVVWGIGVFESRMLWEEATATAEAALLAETLSLAWDDIEGPQRWAVEIECPDSDDVLRLVEETSADDSVLGWSPAPRSIPADWYMADEETPADW
Ga0206356_116552171	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	WKGPAMRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0206355_14204021	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0206355_15447941	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLHGSDW
Ga0179594_104326591	3300020170	Vadose Zone Soil	PPIPGTDRREGKGNPMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSMEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW
Ga0196958_100077213	3300020181	Soil	MRIVVWGNGIVESRMLWEWAESTLEAMHLAETLSMAWDDLEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWFMADESYGADW
Ga0196959_100233482	3300021184	Soil	MRIVVWGSGIVESRMVWERGEATLEAQSLAETLSMAWDDIEGLERWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADEHYLPGADW
Ga0196959_101183312	3300021184	Soil	MRIVVWGSGIVESRMLWQRAEATREAQHLAETLSMAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADEPYRPGADW
Ga0196959_101861482	3300021184	Soil	MRIVVWGNGIVESRMLWERAESTLEAMHLAETLSMAWDDLEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWFMADESYGADW
Ga0242648_10599832	3300022506	Soil	GTGMRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW
Ga0242660_11121871	3300022531	Soil	GKGTGMRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTHFPGSDW
Ga0242660_12345512	3300022531	Soil	MRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSDW
Ga0196962_100051053	3300024430	Soil	MRIVVWGNGIVESRMLWERAESTLEAMHLAETLSMAWDDIQGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPYGADW
Ga0196962_100147103	3300024430	Soil	MRIVVWGSGIVESRMLWERAEASLEAQNLAETLSMAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADEHYLPGADW
Ga0209640_114088652	3300025324	Soil	MRVVVWGVGAVESAMLWERAEATAEASRLAETLSLAWDDIDGPERWAVEVECPEPDDVLRLVEETSGDDSVLGWSPAPREVPAAWYMADDDPLGF
Ga0207653_103755491	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	SGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW
Ga0207684_111950071	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW
Ga0207646_112930081	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVWGVGAVESGMLWARAEGTDDARQVAETLSLAWDDVEGPERWAVEIECADPDDVLRLVEETSGDDAVLGWSPAPKEIPTSWFMTDEAENLW
Ga0207711_117944871	3300025941	Switchgrass Rhizosphere	MRIVVWGQGIVESKMLWERGESTLEAHDLAETLSIAWDDIDGPERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPSAWYMADDAFLQGNDW
Ga0207661_104477572	3300025944	Corn Rhizosphere	MRIVVWGNGIVESRMLWESGESTLEAQHLAETLSMAWEDIDGLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPATWFMADEPFTPGADW
Ga0207667_108146301	3300025949	Corn Rhizosphere	MRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWY
Ga0209027_11955552	3300026300	Grasslands Soil	MLWERAESTLEAHNLAETLSIAWEDLGGVERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLGNDW
Ga0209239_12262871	3300026310	Grasslands Soil	MRIVVWGNGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0209473_12786212	3300026330	Soil	MRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW
Ga0209267_12202182	3300026331	Soil	MRIVVWGSGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0209805_14014652	3300026542	Soil	MRIVVWGSGIVESRMLWERGESTLEAHHLAETLSIAWEDIEGLERWALEIECPAPDDVLRLVEETSGDDAVLGWSPAPKE
Ga0256866_10132592	3300027650	Soil	MRVVVWGTGVMESRMLWEQARATEEAAHLAETLSMAWDDVQGPLRWAVEVDCPDPDDVLRLVEETSGDESVLGWSPAPRDVPADWFMVDEEEENLPLEW
Ga0209486_104843862	3300027886	Agricultural Soil	MRIVVWGSGIVESRMLWERGEATLEAQSLAETLSMAWDDIEGLSRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADESFLPGADW
Ga0247707_10244962	3300028003	Soil	MRIVVWGSGIVESRMLWERAESTLEAQHLAETLSIAWEDIEGLDRWSVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMTDDAYHQGHDW
Ga0247717_10204441	3300028006	Soil	MRIVVWGSGIVESRMLWERAESTLDAQHLAETLSIAWDDIEGLDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWFLADDAYHQGNDW
Ga0137415_103413983	3300028536	Vadose Zone Soil	MRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW
Ga0307504_100739402	3300028792	Soil	MRIVVWGNGIVESRMLWERGESTLAATNVAETLSLAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLPGSDW
Ga0299907_100915372	3300030006	Soil	MRIVVWGSGIVESRMVWERGEATLEAQNMAETLSMAWDDIEGLDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFRLDADW
Ga0299907_101583712	3300030006	Soil	MRIVVWGTGVVESRMLWELAEATEDAVRVAETLSIAWDDVEGPERWAVEVDCPDPDDVLRLVEETSADDSVLGWSPAPREIPAAWFMAD
Ga0299907_110755091	3300030006	Soil	MRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWDDIEGLDRWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYHQGNDW
Ga0073997_122183931	3300030997	Soil	IVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSMEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW
Ga0299913_100643642	3300031229	Soil	MRIVVWGSGIVESRMLWERAEATLEARNLAETLSMAWDDIEGLDRWAIEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADEPFLPGADW
Ga0307408_1004710692	3300031548	Rhizosphere	MRIVVWGSGIVESRMLWERGEATLEAQNLAETLSMAWDDIEGLDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0307408_1021414811	3300031548	Rhizosphere	WGNGIVESRMLWERAESTLEAQHLAENLSLAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGADW
Ga0307469_109617132	3300031720	Hardwood Forest Soil	MRIVVWGSGIVESRMLWERGESTLEAQNLAETLSIAWDDIEGIERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMADEPFLPGADW
Ga0307405_111212391	3300031731	Rhizosphere	MRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDASHQANDW
Ga0307468_1008497181	3300031740	Hardwood Forest Soil	GPAMRIVVWGSGIVESRMLWERAESTLEAQNLAETLSMAWDDVEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMADEPFLPGADW
Ga0307473_105481192	3300031820	Hardwood Forest Soil	MRIVVWGSGIVESRMLWERGESTLEAQNLAETLSIAWDDIEGIERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW
Ga0307411_113298052	3300032005	Rhizosphere	MRIVVWGNGIVESRMLWERAESTLEAQHLAENLSLAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGSDW
Ga0307471_1000147233	3300032180	Hardwood Forest Soil	MRIVVWGSGIVESRMLWERGESTLEAQNLAETLSIAWDDIEGIERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFSPGADW
Ga0307471_1001462374	3300032180	Hardwood Forest Soil	MRIVVWGSGIVESRMLWERGESTLEAQNLAETLSMAWDDIEGLERWALEIECPEPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYFPGADW
Ga0334913_147435_3_272	3300034172	Sub-Biocrust Soil	MRIVVWGVGAVESNMLWQRAEGTEDARRVAETLSMAWEDVAGPERWAVEIECRDSDDVLRLIEETASDDSVLGWSPAPREIPAAWFLADE
Ga0372943_0036511_2445_2690	3300034268	Soil	MRVVVWGSGIVESQMLWERGESTLEAQHLAETLSIAWDDIEGPERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPCPRDVP
Ga0372943_0406326_250_543	3300034268	Soil	MRIVVWGSGIVESNMLWERGESTLEAQHLAETLSIAWDDIEGPERWSLEIECPRPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGADW
Ga0372943_0735822_151_474	3300034268	Soil	MPPEGEEPAMRIVVWGSGIVESRMLWERGEATLEAHHLAETLSIAWEDIEGIERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW
Ga0334931_181916_219_476	3300034377	Sub-Biocrust Soil	MLWERAEGTEDARRVAEALSIAWDDVAGPERWAVEIDCTDPDEVLRLVEETSADDSVLGWSPAPREIPTAWFMADDAENLTAYDW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053149

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences