Metagenome / Metatranscriptome Family F045732

Basic Information
Family ID	F045732
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	71 residues
Representative Sequence	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA
Number of Associated Samples	131
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	41.22 %
% of genes near scaffold ends (potentially truncated)	48.03 %
% of genes from short scaffolds (< 2000 bps)	78.95 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (57.895 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (14.474 % of family members)
Environment Ontology (ENVO)	Unclassified (27.632 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.079 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.31% β-sheet: 31.34% Coil/Unstructured: 31.34%
Feature Viewer

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Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF06199	Phage_tail_2	15.13
PF00072	Response_reg	5.92
PF11367	DUF3168	3.95
PF11836	Phage_TAC_11	2.63
PF05521	Phage_H_T_join	1.32
PF07758	DUF1614	1.32
PF09550	Phage_TAC_6	1.32
PF01053	Cys_Met_Meta_PP	1.32
PF00926	DHBP_synthase	0.66
PF14378	PAP2_3	0.66
PF00089	Trypsin	0.66
PF00326	Peptidase_S9	0.66
PF09994	DUF2235	0.66
PF12840	HTH_20	0.66
PF02690	Na_Pi_cotrans	0.66
PF01272	GreA_GreB	0.66
PF00877	NLPC_P60	0.66
PF07332	Phage_holin_3_6	0.66
PF09084	NMT1	0.66
PF04542	Sigma70_r2	0.66
PF01042	Ribonuc_L-PSP	0.66
PF08281	Sigma70_r4_2	0.66
PF09343	DUF2460	0.66
PF04101	Glyco_tran_28_C	0.66
PF04392	ABC_sub_bind	0.66
PF00456	Transketolase_N	0.66
PF00190	Cupin_1	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	1.32
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	1.32
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	1.32
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	1.32
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.32
COG4089	Uncharacterized membrane protein	Function unknown [S]	1.32
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.32
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.32
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.32
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.32
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	1.32
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	1.32
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.66
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.66
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.66
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.66
COG1283	Na+/phosphate symporter	Inorganic ion transport and metabolism [P]	0.66
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.66
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.66
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.66
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.66
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.66
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.66

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
All Organisms	root	All Organisms	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
cellular organisms	root	All Organisms → cellular organisms	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.37 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.66 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.32 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	0.66 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.66 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.66 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.66 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.66 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_5160_length_1090_cov_8.013762	Not Available	1122	Open in IMG/M
2162886012\|MBSR1b_contig_14199964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300000729\|JGI12371J11900_1014541	Not Available	525	Open in IMG/M
3300000881\|JGI10215J12807_1141633	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300001904\|JGI24736J21556_1025160	Not Available	926	Open in IMG/M
3300002070\|JGI24750J21931_1042323	Not Available	694	Open in IMG/M
3300002459\|JGI24751J29686_10106258	Not Available	587	Open in IMG/M
3300003347\|JGI26128J50194_1006914	Not Available	737	Open in IMG/M
3300003349\|JGI26129J50193_1006893	Not Available	818	Open in IMG/M
3300003994\|Ga0055435_10010209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1767	Open in IMG/M
3300003995\|Ga0055438_10011525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1822	Open in IMG/M
3300004114\|Ga0062593_101639742	Not Available	700	Open in IMG/M
3300004114\|Ga0062593_103012971	Not Available	539	Open in IMG/M
3300004114\|Ga0062593_103040539	Not Available	537	Open in IMG/M
3300004156\|Ga0062589_100396628	Not Available	1119	Open in IMG/M
3300004156\|Ga0062589_102774164	Not Available	511	Open in IMG/M
3300004463\|Ga0063356_101829377	Not Available	913	Open in IMG/M
3300004463\|Ga0063356_103451888	Not Available	681	Open in IMG/M
3300004479\|Ga0062595_100502419	Not Available	911	Open in IMG/M
3300004480\|Ga0062592_100519629	Not Available	989	Open in IMG/M
3300004480\|Ga0062592_102348354	Not Available	534	Open in IMG/M
3300005162\|Ga0066814_10000716	All Organisms → cellular organisms → Bacteria → Proteobacteria	2267	Open in IMG/M
3300005205\|Ga0068999_10055408	Not Available	711	Open in IMG/M
3300005290\|Ga0065712_10084709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2746	Open in IMG/M
3300005294\|Ga0065705_10157673	Not Available	1841	Open in IMG/M
3300005329\|Ga0070683_101279572	Not Available	705	Open in IMG/M
3300005332\|Ga0066388_100127604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3081	Open in IMG/M
3300005332\|Ga0066388_106450908	Not Available	591	Open in IMG/M
3300005333\|Ga0070677_10000078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31118	Open in IMG/M
3300005334\|Ga0068869_100450918	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300005334\|Ga0068869_101582947	Not Available	583	Open in IMG/M
3300005336\|Ga0070680_100037042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3941	Open in IMG/M
3300005366\|Ga0070659_101082311	Not Available	706	Open in IMG/M
3300005406\|Ga0070703_10030486	Not Available	1625	Open in IMG/M
3300005436\|Ga0070713_100130231	Not Available	2218	Open in IMG/M
3300005438\|Ga0070701_10522823	Not Available	774	Open in IMG/M
3300005444\|Ga0070694_101090560	Not Available	666	Open in IMG/M
3300005457\|Ga0070662_100781523	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005529\|Ga0070741_10023794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9248	Open in IMG/M
3300005546\|Ga0070696_100568098	Not Available	911	Open in IMG/M
3300005564\|Ga0070664_100421924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1222	Open in IMG/M
3300005614\|Ga0068856_100717218	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300005713\|Ga0066905_100141238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1718	Open in IMG/M
3300005713\|Ga0066905_100741759	Not Available	846	Open in IMG/M
3300005764\|Ga0066903_100831358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1658	Open in IMG/M
3300005764\|Ga0066903_101037168	All Organisms → cellular organisms → Bacteria → Proteobacteria	1504	Open in IMG/M
3300005841\|Ga0068863_101306110	Not Available	732	Open in IMG/M
3300005843\|Ga0068860_101140665	Not Available	799	Open in IMG/M
3300005937\|Ga0081455_10005892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13312	Open in IMG/M
3300006579\|Ga0074054_11953378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1563	Open in IMG/M
3300006580\|Ga0074049_10028566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1629	Open in IMG/M
3300006581\|Ga0074048_11973711	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300006606\|Ga0074062_12108472	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006640\|Ga0075527_10001448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	5401	Open in IMG/M
3300006854\|Ga0075425_100202237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2283	Open in IMG/M
3300006854\|Ga0075425_102016403	Not Available	645	Open in IMG/M
3300006871\|Ga0075434_100994210	Not Available	853	Open in IMG/M
3300006871\|Ga0075434_102268898	Not Available	546	Open in IMG/M
3300006881\|Ga0068865_100781270	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300006954\|Ga0079219_10095989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1441	Open in IMG/M
3300007076\|Ga0075435_101453925	Not Available	601	Open in IMG/M
3300009029\|Ga0066793_10155355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1334	Open in IMG/M
3300009036\|Ga0105244_10379258	Not Available	651	Open in IMG/M
3300009053\|Ga0105095_10417569	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300009094\|Ga0111539_10034556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6129	Open in IMG/M
3300009177\|Ga0105248_10073484	All Organisms → cellular organisms → Bacteria → Proteobacteria	3843	Open in IMG/M
3300010047\|Ga0126382_11223840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300010362\|Ga0126377_10006146	All Organisms → cellular organisms → Bacteria → Proteobacteria	8992	Open in IMG/M
3300010362\|Ga0126377_10071963	All Organisms → cellular organisms → Bacteria → Proteobacteria	3079	Open in IMG/M
3300010371\|Ga0134125_12425506	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012489\|Ga0157349_1000973	Not Available	1529	Open in IMG/M
3300012503\|Ga0157313_1002564	Not Available	1099	Open in IMG/M
3300012891\|Ga0157305_10064460	Not Available	823	Open in IMG/M
3300012893\|Ga0157284_10003057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2700	Open in IMG/M
3300012899\|Ga0157299_10031030	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300012899\|Ga0157299_10040587	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300012916\|Ga0157310_10006390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2713	Open in IMG/M
3300012960\|Ga0164301_10701814	Not Available	761	Open in IMG/M
3300012971\|Ga0126369_10356272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1487	Open in IMG/M
3300012985\|Ga0164308_11364724	Not Available	646	Open in IMG/M
3300013100\|Ga0157373_10909461	Not Available	653	Open in IMG/M
3300013306\|Ga0163162_10839370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300013307\|Ga0157372_11007434	Not Available	965	Open in IMG/M
3300014308\|Ga0075354_1006096	Not Available	1617	Open in IMG/M
3300014497\|Ga0182008_10304615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300014969\|Ga0157376_10000034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	161526	Open in IMG/M
3300015371\|Ga0132258_10050435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9515	Open in IMG/M
3300015371\|Ga0132258_10135082	All Organisms → cellular organisms → Bacteria → Proteobacteria	5889	Open in IMG/M
3300015371\|Ga0132258_10187658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5004	Open in IMG/M
3300015371\|Ga0132258_10721000	All Organisms → cellular organisms → Bacteria → Proteobacteria	2511	Open in IMG/M
3300015371\|Ga0132258_11278925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1854	Open in IMG/M
3300015372\|Ga0132256_101911359	Not Available	701	Open in IMG/M
3300015372\|Ga0132256_103206400	Not Available	550	Open in IMG/M
3300017973\|Ga0187780_10090514	All Organisms → cellular organisms → Bacteria → Proteobacteria	2106	Open in IMG/M
3300018032\|Ga0187788_10539036	Not Available	509	Open in IMG/M
3300019356\|Ga0173481_10159076	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300022892\|Ga0247753_1000275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4995	Open in IMG/M
3300023102\|Ga0247754_1097530	Not Available	709	Open in IMG/M
3300025315\|Ga0207697_10260083	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300025457\|Ga0208850_1015011	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300025711\|Ga0207696_1121147	Not Available	705	Open in IMG/M
3300025910\|Ga0207684_10883127	Not Available	752	Open in IMG/M
3300025911\|Ga0207654_10905955	Not Available	639	Open in IMG/M
3300025923\|Ga0207681_11713405	Not Available	525	Open in IMG/M
3300025925\|Ga0207650_10264440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1396	Open in IMG/M
3300025932\|Ga0207690_11488041	Not Available	566	Open in IMG/M
3300025941\|Ga0207711_10144545	All Organisms → cellular organisms → Bacteria → Proteobacteria	2142	Open in IMG/M
3300026095\|Ga0207676_12236780	Not Available	545	Open in IMG/M
3300026273\|Ga0209881_1036961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300026452\|Ga0256821_1005296	Not Available	1200	Open in IMG/M
3300026766\|Ga0207450_101384	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300026772\|Ga0207596_100459	Not Available	1540	Open in IMG/M
3300026798\|Ga0207515_100137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300026807\|Ga0207547_101300	Not Available	917	Open in IMG/M
3300026828\|Ga0207502_100384	Not Available	1539	Open in IMG/M
3300026828\|Ga0207502_107712	Not Available	560	Open in IMG/M
3300026833\|Ga0207728_109185	Not Available	937	Open in IMG/M
3300026861\|Ga0207503_1008962	Not Available	605	Open in IMG/M
3300026938\|Ga0207610_102831	Not Available	514	Open in IMG/M
3300026944\|Ga0207570_1000315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2451	Open in IMG/M
3300027178\|Ga0207606_100103	Not Available	1569	Open in IMG/M
3300027411\|Ga0207519_100547	Not Available	1137	Open in IMG/M
3300027430\|Ga0207561_100994	Not Available	883	Open in IMG/M
3300027444\|Ga0207468_1003936	Not Available	756	Open in IMG/M
3300027526\|Ga0209968_1011036	Not Available	1394	Open in IMG/M
3300027717\|Ga0209998_10000522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10470	Open in IMG/M
3300027717\|Ga0209998_10075349	Not Available	811	Open in IMG/M
3300027775\|Ga0209177_10429887	Not Available	536	Open in IMG/M
3300027876\|Ga0209974_10058735	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300027876\|Ga0209974_10105935	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300027907\|Ga0207428_10617951	Not Available	780	Open in IMG/M
3300027992\|Ga0247750_1042252	Not Available	515	Open in IMG/M
3300028381\|Ga0268264_11322046	Not Available	731	Open in IMG/M
3300028889\|Ga0247827_10189249	Not Available	1128	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1010830	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300031716\|Ga0310813_10771090	Not Available	863	Open in IMG/M
3300031740\|Ga0307468_100356749	Not Available	1093	Open in IMG/M
3300031820\|Ga0307473_10289429	Not Available	1025	Open in IMG/M
3300031854\|Ga0310904_11235654	Not Available	539	Open in IMG/M
3300032000\|Ga0310903_10007244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3248	Open in IMG/M
3300032144\|Ga0315910_10642152	Not Available	823	Open in IMG/M
3300032180\|Ga0307471_103293947	Not Available	572	Open in IMG/M
3300032205\|Ga0307472_101382104	Not Available	682	Open in IMG/M
3300032893\|Ga0335069_10048323	All Organisms → cellular organisms → Bacteria → Proteobacteria	5614	Open in IMG/M
3300032897\|Ga0335071_11238656	Not Available	691	Open in IMG/M
3300033004\|Ga0335084_10259716	Not Available	1799	Open in IMG/M
3300033486\|Ga0316624_11401192	Not Available	640	Open in IMG/M
3300034692\|Ga0373917_0035000	Not Available	724	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.84%
Host-Associated	Host-Associated	37.50%
Engineered	Engineered	0.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.55%
Plants	Host-Associated → Plants	37.50%
Aquatic	Environmental → Aquatic	3.29%
Bioremediation	Engineered → Bioremediation	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.45%
Marine	Environmental → Aquatic → Marine	1.97%
Freshwater	Environmental → Aquatic → Freshwater	1.32%
Metal	Engineered → Bioremediation → Metal	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.45%
Loam	Environmental → Terrestrial → Soil → Loam	11.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.61%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.66%
Sand	Environmental → Terrestrial → Soil → Sand	0.66%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	17.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.66%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.66%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	14.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.63%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.32%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.32%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.32%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.66%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.66%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.66%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.66%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.66%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000729	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300001904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300003349	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM	Host-Associated	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026731	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4-10 (SPAdes)	Environmental	Open in IMG/M
3300026766	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-D (SPAdes)	Environmental	Open in IMG/M
3300026772	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-12 (SPAdes)	Environmental	Open in IMG/M
3300026798	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026807	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026809	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 47 (SPAdes)	Environmental	Open in IMG/M
3300026828	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-12 (SPAdes)	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300026861	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)	Environmental	Open in IMG/M
3300026938	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-12 (SPAdes)	Environmental	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027178	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027411	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-12 (SPAdes)	Environmental	Open in IMG/M
3300027430	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-10 (SPAdes)	Environmental	Open in IMG/M
3300027444	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1w-11 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01223010	2140918013	Soil	MRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWIATVIDWARRAA
MBSR1b_0706.00002810	2162886012	Miscanthus Rhizosphere	MRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA
JGI12371J11900_10145412	3300000729	Tropical Forest Soil	MHRRRRVCIEAPKGPISAGFTVPETADAADVAMKLRKGGWEPYRIRLEREQNVWIAIVIYWKRAA*
JGI10215J12807_11416331	3300000881	Soil	NVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
JGI24736J21556_10251601	3300001904	Corn Rhizosphere	VQKLRGPRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
JGI24750J21931_10423233	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	RVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
JGI24751J29686_101062582	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	THKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
JGI26128J50194_10069142	3300003347	Arabidopsis Thaliana Rhizosphere	RRCLGSIFPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
JGI26129J50193_10068931	3300003349	Arabidopsis Thaliana Rhizosphere	FPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0055435_100102092	3300003994	Natural And Restored Wetlands	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0055438_100115253	3300003995	Natural And Restored Wetlands	GAAARGCVCAAHVVCSMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0062593_1016397421	3300004114	Soil	RRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0062593_1030129712	3300004114	Soil	SHVVSKMRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA*
Ga0062593_1030405392	3300004114	Soil	RRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0062589_1003966281	3300004156	Soil	VSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
Ga0062589_1027741641	3300004156	Soil	VSKMRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARR
Ga0063356_1018293771	3300004463	Arabidopsis Thaliana Rhizosphere	MRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0063356_1034518882	3300004463	Arabidopsis Thaliana Rhizosphere	RRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0062595_1005024193	3300004479	Soil	KLRGPRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
Ga0062592_1005196294	3300004480	Soil	RRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
Ga0062592_1023483541	3300004480	Soil	IFPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0066814_100007166	3300005162	Soil	MVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0068999_100554081	3300005205	Natural And Restored Wetlands	MRHRRRRVFIDTQKGRLSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0065712_100847093	3300005290	Miscanthus Rhizosphere	VCNMRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0065705_101576735	3300005294	Switchgrass Rhizosphere	APRRCLGPIFPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0070683_1012795721	3300005329	Corn Rhizosphere	MSRRRRRVFIETQKGRRSAGFTVHEGADAADVSLALRNRGWIAYRLRLDSENHAWVAVIIDWKRVA*
Ga0066388_1001276047	3300005332	Tropical Forest Soil	MVSEMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMCLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0066388_1064509081	3300005332	Tropical Forest Soil	RVFIETSRGRVSAGFTVPEAADAADVSMTLRLRGWSPYRLRLEAEQYAWVAVVIDWTKAA
Ga0070677_100000782	3300005333	Miscanthus Rhizosphere	MRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
Ga0068869_1004509183	3300005334	Miscanthus Rhizosphere	VVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0068869_1015829472	3300005334	Miscanthus Rhizosphere	QKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0070680_1000370424	3300005336	Corn Rhizosphere	VSKMRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA*
Ga0070659_1010823111	3300005366	Corn Rhizosphere	MRHRRRRVYIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEPEQHAWVATVIDWTRRAA*
Ga0070703_100304864	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	PRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0070713_1001302313	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRRRRVFIETQKGRRSAGFTVHEGADAADVSLALRNRGWIAYRLRLDMENHAWVAVIIDWQRVA*
Ga0070701_105228231	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRRRRVFIETQKGRRSAGFTVHEGADAADVSLALRNRGWIAYRLRLDAENHAWVAVIIDWQRVA*
Ga0070694_1010905602	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA*
Ga0070662_1007815231	3300005457	Corn Rhizosphere	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVI
Ga0070741_1002379412	3300005529	Surface Soil	MRQRRRRVYIDTHKGRVSAGFTVPAEADAADVSMRLRERGWTAYRLRLEAEQHAWVASVIDWTKRAA*
Ga0070696_1005680982	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA*
Ga0070664_1004219242	3300005564	Corn Rhizosphere	MRHRRRRVYIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEPEQHSWVATVIDWTRRAA*
Ga0068856_1007172181	3300005614	Corn Rhizosphere	RLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0066905_1001412381	3300005713	Tropical Forest Soil	LAGCRQSARRRIFLVHRMRHRRRRVFIDTPKGRVSAGFTVPETADAADVSMRLRERGWAPYRLRRDQEQNAWIAIVIDWQRAA*
Ga0066905_1007417592	3300005713	Tropical Forest Soil	MVSKMRHRRRRVFIDTQKGRVSAGFTVTAAADAADVSMCLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0066903_1008313583	3300005764	Tropical Forest Soil	MRHRRRRVFIDTQRGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0066903_1010371683	3300005764	Tropical Forest Soil	LPARSNNLSLPTGITMSRRRRRVFIETQKGRRSAGSTVDGLADAADVSMALRNRGWVAYRLRLDAENHAWIATVIDWRQAA*
Ga0068863_1013061101	3300005841	Switchgrass Rhizosphere	CNMRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0068860_1011406652	3300005843	Switchgrass Rhizosphere	VVCNMRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0081455_100058928	3300005937	Tabebuia Heterophylla Rhizosphere	VRLCLRGVLWVSNMRHRRRRVFIDTQKGRVSAGFTVAAQADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0074054_119533786	3300006579	Soil	IFPSARLYHPRRCARLRLRGPNVVSEMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0074049_100285662	3300006580	Soil	MRQRRRRVFIDTHKGCVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA*
Ga0074048_119737111	3300006581	Soil	MRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRA
Ga0074062_121084721	3300006606	Soil	RLRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWTAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0075527_100014482	3300006640	Arctic Peat Soil	MRHRRRRVFIDTPKGRVSAGFTVPETADAADVAMRLRERGWAPYRLRLEPDQHAWIAVVIDWRRAA*
Ga0075425_1002022374	3300006854	Populus Rhizosphere	VPALSPLVSKMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATIIDWTRRAA*
Ga0075425_1020164031	3300006854	Populus Rhizosphere	MSRRRRRVFIETQKGRRSAGFTVHEEADAADVSLALRNRGWIAYRLRLDTENHAWVAVIIDWQRVA*
Ga0075434_1009942102	3300006871	Populus Rhizosphere	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATIIDWTRRAA*
Ga0075434_1022688981	3300006871	Populus Rhizosphere	MRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEPEQHSWVATVIDWTRRAA*
Ga0068865_1007812701	3300006881	Miscanthus Rhizosphere	MRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARR
Ga0079219_100959892	3300006954	Agricultural Soil	MPHHRRRRVYIDTSKGRVSAGFTVPAEADAADVSMALRRRGYTPYRLTLDVENHAWIAVVIDWKRAA*
Ga0075435_1014539251	3300007076	Populus Rhizosphere	SPLVSKMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATIIDWTRRAA*
Ga0066793_101553552	3300009029	Prmafrost Soil	MPHRRRRVFIETPRGRVSAGFTVPEAADAADVSMRLRERGWTPYKLRLEREQHAWIAVVIDWVRAA*
Ga0105244_103792582	3300009036	Miscanthus Rhizosphere	HKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
Ga0105095_104175691	3300009053	Freshwater Sediment	RRRRVFIEGPKGRVSAGFTVPAEADAADVSMQLRERGWTPYRLRLDHEQHAWIAIVIDWQRAA*
Ga0111539_100345568	3300009094	Populus Rhizosphere	MRQRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHVWVATVIDWTRRAA*
Ga0105248_100734847	3300009177	Switchgrass Rhizosphere	MRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0126382_112238401	3300010047	Tropical Forest Soil	MVRKMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMCLRERGWIAYRLRLEAEQHAWV
Ga0126377_100061466	3300010362	Tropical Forest Soil	MVSKMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMCLRERGWIAYRLRLEAEQHVWVATVIDWTRRAA*
Ga0126377_100719633	3300010362	Tropical Forest Soil	MVSKMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWTAYRLRLDAEQHAWVAAVIDWTRRAA*
Ga0134125_124255062	3300010371	Terrestrial Soil	VFIDSQKGRVSAGFTVAAEADAADVSMRLRERGWTAYRLRLEAEQHAWVATVIDWTRRDAAA*
Ga0157349_10009734	3300012489	Unplanted Soil	RRRVFIDTHKGRVSAGFTVAAEADAADVSMRLREHGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0157313_10025643	3300012503	Arabidopsis Rhizosphere	CLGPIFPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0157305_100644603	3300012891	Soil	IFPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWIATVIDWARRAA*
Ga0157284_100030577	3300012893	Soil	LRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0157299_100310301	3300012899	Soil	KMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0157299_100405871	3300012899	Soil	RAIISHVQKLRGPRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
Ga0157310_100063907	3300012916	Soil	RRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0164301_107018143	3300012960	Soil	VSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0126369_103562724	3300012971	Tropical Forest Soil	VSPGKPKNPTYLVGAGSPVRSNNLSLPTGIAMSRRRRRVFIETQKGRRSAGFTVDGLADAADVSMALRNRGWVAYRLRLDAENHAWIATVIDWRQAA*
Ga0164308_113647242	3300012985	Soil	LRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0157373_109094611	3300013100	Corn Rhizosphere	MRHRRRRVYIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA*
Ga0163162_108393703	3300013306	Switchgrass Rhizosphere	MRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEPEQHAWVATVSDWTRRTD*
Ga0157372_110074341	3300013307	Corn Rhizosphere	MSRRRRRVFIETQKGRRSAGFTVHEEADAADVSLALRNRGCIAYRLRLDAENHAWVAVIIDWQRVA*
Ga0075354_10060963	3300014308	Natural And Restored Wetlands	VYSMRHRRRRVFIDTQKGRLSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0182008_103046151	3300014497	Rhizosphere	MRHRRRRVYIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLETEQHAWVATVIDWTRRAA*
Ga0157376_10000034120	3300014969	Miscanthus Rhizosphere	MRHRRRKVFIDTHKGRVSACFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA*
Ga0132258_100504357	3300015371	Arabidopsis Rhizosphere	MRHRRRRVFIDTQKGRVSAGFTVAAGADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0132258_101350826	3300015371	Arabidopsis Rhizosphere	MRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRDRGWVAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0132258_101876582	3300015371	Arabidopsis Rhizosphere	VAMSRRRRRVFIETQKGRRSAGFTVDGQADAADVSLAVRARGWIAYRLRLEPENHAWVAVVIDWRRAA*
Ga0132258_107210005	3300015371	Arabidopsis Rhizosphere	MRQRRRRVFIDTHKGCVSAGFTMAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA*
Ga0132258_112789254	3300015371	Arabidopsis Rhizosphere	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTCRAA*
Ga0132256_1019113591	3300015372	Arabidopsis Rhizosphere	SHVVCNMRNRSRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA*
Ga0132256_1032064002	3300015372	Arabidopsis Rhizosphere	RVFIETQKGRRSAGFTVDGQADAADVSLAVRARGWIAYRLRLEPENHAWVAVVIDWRRAA
Ga0187780_100905142	3300017973	Tropical Peatland	MSHRRRRRVYIDMPKGRVSAGFTVPAEADAADVSMELRRRGWSPYRLNLDAENYAWVAIVIDWKRAA
Ga0187788_105390361	3300018032	Tropical Peatland	FDTVFYRGLGMSRRRRRVFIENQKGRRSAGFSVDERADAADVSLALRRRGWIAYRLRLEPENYAWVAIVIDWQRVA
Ga0173481_101590762	3300019356	Soil	MRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0247753_10002759	3300022892	Soil	MRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0247754_10975301	3300023102	Soil	MRHRRRRVFIDTNKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEVEQHAWVATVIDWA
Ga0207697_102600832	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0208850_10150111	3300025457	Arctic Peat Soil	MRHRRRRVFIDTPKGRVSAGFTVPETADAADVAMRLRERGWAPYRLRLEPDQHAWIAVVIDWRRAA
Ga0207696_11211471	3300025711	Switchgrass Rhizosphere	PRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0207684_108831271	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSKMRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA
Ga0207654_109059551	3300025911	Corn Rhizosphere	RCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207681_117134051	3300025923	Switchgrass Rhizosphere	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA
Ga0207650_102644401	3300025925	Switchgrass Rhizosphere	RSAMSRRRRRVFIETQKGRRSAGFTVHEGADAADVSLALRNRGWIAYRLRLDAENHAWVAVIIDWQRVA
Ga0207690_114880412	3300025932	Corn Rhizosphere	VFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA
Ga0207711_101445451	3300025941	Switchgrass Rhizosphere	VCNMRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWVAYRLRLEAEQHAWVATVIDWTRRAA
Ga0207676_122367801	3300026095	Switchgrass Rhizosphere	GWVRSTGPKCLWRSAMSRRRRRVFIETQKGRRSAGFTVHEEADAADVSLALRNRGWIAYRLRLDAENHAWVAVIIDWQRVA
Ga0207698_109058891	3300026142	Corn Rhizosphere	MRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAW
Ga0209881_10369612	3300026273	Soil	MRHRRRRVFIDTPKGRVSAGFTVPEIADAADVAMRLRERGWAPYRLRLEPDQHAWIAVVIDWRRAA
Ga0256821_10052962	3300026452	Sediment	VGHVVCNMRHRRRRVFIDTQKGRVSAGFTVAVEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA
Ga0207523_1006962	3300026731	Soil	VRAAACGCVCAGHVVCNMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207450_1013841	3300026766	Soil	PRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207596_1004594	3300026772	Soil	DTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207515_1001373	3300026798	Soil	CVCAGHVVCNMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207547_1013003	3300026807	Soil	IDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0207820_1135051	3300026809	Tropical Forest Soil	MHRRRRVCIEAPKGPISAGFTVPETADAADVAMKLRKGGWEPYRIRLEREQNVWIAIV
Ga0207502_1003841	3300026828	Soil	LRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207502_1077122	3300026828	Soil	KLRGPRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0207728_1091852	3300026833	Tropical Forest Soil	MHRRRRVCIEAPKGPISAGFTVPETADAADVAMKLRKGGWEPYRIRLEREQNVWIAIVIYWKRAA
Ga0207503_10089621	3300026861	Soil	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207610_1028311	3300026938	Soil	RRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207570_10003151	3300026944	Soil	ARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0207606_1001031	3300027178	Soil	HVQKLRGPRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0207519_1005471	3300027411	Soil	SLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0207561_1009943	3300027430	Soil	IRAIISHVQKLRGPRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0207468_10039363	3300027444	Soil	RLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0209968_10110362	3300027526	Arabidopsis Thaliana Rhizosphere	VSKMRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWIATVI
Ga0209998_1000052218	3300027717	Arabidopsis Thaliana Rhizosphere	FPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0209998_100753491	3300027717	Arabidopsis Thaliana Rhizosphere	CAGHVVCNMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWIATVIDWARRAA
Ga0209177_104298871	3300027775	Agricultural Soil	MRHRRRRVYIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEPEQHSWVATVIDWTRRAA
Ga0209974_100587352	3300027876	Arabidopsis Thaliana Rhizosphere	MRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWIATVI
Ga0209974_101059352	3300027876	Arabidopsis Thaliana Rhizosphere	MRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWIATVIDWARRAA
Ga0207428_106179511	3300027907	Populus Rhizosphere	THVVGEMRQRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHVWVATVIDWTRRAA
Ga0247750_10422522	3300027992	Soil	ISHVQKLRGPRAESLVSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0268264_113220461	3300028381	Switchgrass Rhizosphere	VVCNMRNRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA
Ga0247827_101892493	3300028889	Soil	VFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
(restricted) Ga0255311_10108303	3300031150	Sandy Soil	MRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWIATVIDWARRAA
Ga0310888_105894551	3300031538	Soil	HKGRVSAGFTVAAEADAADVSMRLREHGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0310813_107710901	3300031716	Soil	IFPSARLFRPRRCARLRLRGPNVVSKMRHRRRRVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWIATVIDWARRAA
Ga0307468_1003567493	3300031740	Hardwood Forest Soil	MVSKMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA
Ga0307473_102894292	3300031820	Hardwood Forest Soil	MVSLMSHRRRRRVFIDTPKGRVSAGFTVPAEADAAEVSMRLRDRGWATYRLRLEPEQNAWVALVIDWQRAA
Ga0310904_112356541	3300031854	Soil	VSRMRQRRRRVFIDTHKGCVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA
Ga0310903_100072441	3300032000	Soil	VSKMRHRRRKVFIDTHKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQYAWVATVIDWTRRAA
Ga0315910_106421522	3300032144	Soil	MRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWARRAA
Ga0307471_1032939472	3300032180	Hardwood Forest Soil	RRRRRVFIDTPKGRVSAGFTVPAEADAADVSMRLRDRGWATYRLRLEPEQNAWVALVIDWQRAA
Ga0307472_1013821042	3300032205	Hardwood Forest Soil	MVSLMSHRRRRRVFIDTPKGRVSAGFTVPAEADAADVSMRLRDRGWATYRLRLEPEQNAWVALVIDWQRAA
Ga0335069_100483235	3300032893	Soil	MSHRRRRRVYIDVPKGRVSAGFTVPAEADAADVSMELRRRGWSPYRLSLDAENYAWVAIVIDWKRAA
Ga0335071_112386562	3300032897	Soil	MSHRRRRRVYIDMPKGRVSAGFTVSAEADAADVSMELRRRGWSPYRLSLDAENYAWVAIVIDWKRAA
Ga0335084_102597163	3300033004	Soil	VGHVVCNMRHRRRRVFIDTQKGRVSAGFTVAAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVIDWTRRAA
Ga0316624_114011921	3300033486	Soil	MRYCRRQVFIDMPKGRVSAGFTVPETADAANVSMRLRERGWAPYWLRLERDQHAWIAIVIDWRRAA
Ga0373917_0035000_544_723	3300034692	Sediment Slurry	MRHRRRRVFIDTHKGRVSAGFTVTAEADAADVSMRLRERGWIAYRLRLEAEQHAWVATVI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters