Metagenome Family F044015

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044015
Family Type	Metagenome
Number of Sequences	155
Average Sequence Length	55 residues
Representative Sequence	MILEVSVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVKDLQKKVSEVT
Number of Associated Samples	76
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.18 %
% of genes near scaffold ends (potentially truncated)	21.29 %
% of genes from short scaffolds (< 2000 bps)	71.61 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.484 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (27.742 % of family members)
Environment Ontology (ENVO)	Unclassified (30.323 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (30.968 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.19% β-sheet: 0.00% Coil/Unstructured: 48.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.2.6.1: HR1 repeat	d1cxzb_	1cxz	0.903
a.25.1.3: Manganese catalase (T-catalase)	d1o9ia_	1o9i	0.88052
a.25.1.1: Ferritin	d1vjxa1	1vjx	0.87863
a.29.6.0: automated matches	d1xg2b1	1xg2	0.87451
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.8717

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF11154	DUF2934	7.10
PF00343	Phosphorylase	7.10
PF00583	Acetyltransf_1	3.87
PF13561	adh_short_C2	3.23
PF00724	Oxidored_FMN	3.23
PF11897	DUF3417	2.58
PF13177	DNA_pol3_delta2	1.94
PF13361	UvrD_C	1.94
PF07589	PEP-CTERM	1.94
PF00459	Inositol_P	1.29
PF00141	peroxidase	1.29
PF01425	Amidase	1.29
PF02899	Phage_int_SAM_1	1.29
PF12706	Lactamase_B_2	1.29
PF13193	AMP-binding_C	1.29
PF01596	Methyltransf_3	1.29
PF13751	DDE_Tnp_1_6	0.65
PF02687	FtsX	0.65
PF09339	HTH_IclR	0.65
PF13531	SBP_bac_11	0.65
PF05187	ETF_QO	0.65
PF00881	Nitroreductase	0.65
PF02146	SIR2	0.65
PF12395	DUF3658	0.65
PF05157	T2SSE_N	0.65
PF01137	RTC	0.65
PF07963	N_methyl	0.65
PF02597	ThiS	0.65
PF02867	Ribonuc_red_lgC	0.65
PF14759	Reductase_C	0.65
PF03641	Lysine_decarbox	0.65
PF00809	Pterin_bind	0.65
PF01904	DUF72	0.65
PF11191	DUF2782	0.65
PF00005	ABC_tran	0.65
PF13466	STAS_2	0.65
PF08450	SGL	0.65
PF02586	SRAP	0.65
PF01842	ACT	0.65
PF00970	FAD_binding_6	0.65
PF07238	PilZ	0.65
PF00909	Ammonium_transp	0.65
PF01739	CheR	0.65
PF02239	Cytochrom_D1	0.65
PF05016	ParE_toxin	0.65
PF00582	Usp	0.65
PF13481	AAA_25	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	7.10
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	3.23
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	3.23
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.29
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	1.29
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.29
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	1.29
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.29
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.29
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.29
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.29
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.65
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.65
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.65
COG2440	Ferredoxin-like protein FixX	Energy production and conversion [C]	0.65
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.65
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.65
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.65
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.65
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.65
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.65
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.65
COG0430	RNA 3'-terminal phosphate cyclase	RNA processing and modification [A]	0.65
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.48 %
Unclassified	root	N/A	44.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.48 %
Unclassified	root	N/A	44.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.48 %
Unclassified	root	N/A	44.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.77 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.65 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	18.06 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.29 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.65 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.29 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.94 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.65 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.65 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.65 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	3.23 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.94 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.65 %
endosymbiont of unidentified scaly snail isolate Monju	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → endosymbiont of unidentified scaly snail isolate Monju	0.65 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.65 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.65 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.65 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.65 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	1.29 %
Mitsuaria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Mitsuaria	1.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.94 %
Burkholderiales bacterium GJ-E10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium GJ-E10	0.65 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.65 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.65 %
endosymbiont of unidentified scaly snail isolate Monju	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → endosymbiont of unidentified scaly snail isolate Monju	0.65 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	1.29 %
unclassified Mitsuaria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Mitsuaria → unclassified Mitsuaria	1.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.94 %
Acidovorax delafieldii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax delafieldii	0.65 %
Burkholderiales bacterium GJ-E10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium GJ-E10	0.65 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.65 %
endosymbiont of unidentified scaly snail isolate Monju	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → endosymbiont of unidentified scaly snail isolate Monju	0.65 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	1.29 %
Mitsuaria sp. 7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Mitsuaria → unclassified Mitsuaria → Mitsuaria sp. 7	1.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.94 %
Acidovorax delafieldii 2AN	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax delafieldii → Acidovorax delafieldii 2AN	0.65 %
Burkholderiales bacterium GJ-E10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium GJ-E10	0.65 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.65 %
endosymbiont of unidentified scaly snail isolate Monju	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → endosymbiont of unidentified scaly snail isolate Monju	0.65 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101727153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1659	Open in IMG/M
3300001213\|JGIcombinedJ13530_106327533	Not Available	580	Open in IMG/M
3300001213\|JGIcombinedJ13530_109164010	Not Available	553	Open in IMG/M
3300003858\|Ga0031656_10041551	All Organisms → cellular organisms → Bacteria → Proteobacteria	1862	Open in IMG/M
3300003859\|Ga0031653_10044753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1207	Open in IMG/M
3300003861\|Ga0031654_10019553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1971	Open in IMG/M
3300003861\|Ga0031654_10044711	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300003861\|Ga0031654_10079118	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300003861\|Ga0031654_10094280	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005534\|Ga0070735_10354416	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005764\|Ga0066903_102575202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	986	Open in IMG/M
3300005833\|Ga0074472_11454799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1607	Open in IMG/M
3300005985\|Ga0081539_10008306	All Organisms → cellular organisms → Bacteria → Proteobacteria	9086	Open in IMG/M
3300006224\|Ga0079037_100015079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5233	Open in IMG/M
3300006224\|Ga0079037_100017254	All Organisms → cellular organisms → Bacteria → Proteobacteria	4962	Open in IMG/M
3300006224\|Ga0079037_100050276	All Organisms → cellular organisms → Bacteria	3255	Open in IMG/M
3300006224\|Ga0079037_100092188	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300006224\|Ga0079037_100114648	Not Available	2294	Open in IMG/M
3300006224\|Ga0079037_100127140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2193	Open in IMG/M
3300006224\|Ga0079037_100268920	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300006224\|Ga0079037_100725734	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300006224\|Ga0079037_100812427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	918	Open in IMG/M
3300006224\|Ga0079037_101591815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	652	Open in IMG/M
3300006224\|Ga0079037_101899857	Not Available	595	Open in IMG/M
3300006224\|Ga0079037_101905134	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006224\|Ga0079037_102055869	Not Available	571	Open in IMG/M
3300006224\|Ga0079037_102446142	Not Available	521	Open in IMG/M
3300006930\|Ga0079303_10367650	Not Available	605	Open in IMG/M
3300006930\|Ga0079303_10393754	Not Available	586	Open in IMG/M
3300006930\|Ga0079303_10484061	Not Available	533	Open in IMG/M
3300007072\|Ga0073932_1194382	Not Available	802	Open in IMG/M
3300007351\|Ga0104751_1041200	Not Available	2380	Open in IMG/M
3300007352\|Ga0104756_1077290	Not Available	1040	Open in IMG/M
3300007764\|Ga0102950_1009230	Not Available	2800	Open in IMG/M
3300009078\|Ga0105106_10676776	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300009091\|Ga0102851_10119512	Not Available	2329	Open in IMG/M
3300009091\|Ga0102851_10266556	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300009091\|Ga0102851_10671913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1092	Open in IMG/M
3300009091\|Ga0102851_12393699	Not Available	603	Open in IMG/M
3300009091\|Ga0102851_12960143	Not Available	545	Open in IMG/M
3300009111\|Ga0115026_10475461	Not Available	923	Open in IMG/M
3300009131\|Ga0115027_10700054	Not Available	760	Open in IMG/M
3300009131\|Ga0115027_10853600	Not Available	700	Open in IMG/M
3300009147\|Ga0114129_12604122	Not Available	604	Open in IMG/M
3300009167\|Ga0113563_10224789	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300009167\|Ga0113563_10295448	All Organisms → cellular organisms → Bacteria → Proteobacteria	1677	Open in IMG/M
3300009167\|Ga0113563_10943477	Not Available	989	Open in IMG/M
3300009179\|Ga0115028_10190439	Not Available	1287	Open in IMG/M
3300009179\|Ga0115028_10694969	Not Available	776	Open in IMG/M
3300009179\|Ga0115028_11688902	Not Available	546	Open in IMG/M
3300009506\|Ga0118657_10275504	All Organisms → cellular organisms → Bacteria → Nitrospirae	2280	Open in IMG/M
3300009509\|Ga0123573_10024703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6676	Open in IMG/M
3300009802\|Ga0105073_1059231	Not Available	528	Open in IMG/M
3300009868\|Ga0130016_10002397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	37738	Open in IMG/M
3300010412\|Ga0136852_12066795	Not Available	535	Open in IMG/M
3300010997\|Ga0139324_1089845	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300012948\|Ga0126375_12002038	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1025553	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300015374\|Ga0132255_101800619	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300017959\|Ga0187779_10053979	All Organisms → cellular organisms → Bacteria	2347	Open in IMG/M
3300017959\|Ga0187779_10314994	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300017961\|Ga0187778_10021749	Not Available	3930	Open in IMG/M
3300017961\|Ga0187778_10749340	Not Available	663	Open in IMG/M
3300017966\|Ga0187776_10138092	Not Available	1488	Open in IMG/M
3300018064\|Ga0187773_10863186	Not Available	581	Open in IMG/M
3300018085\|Ga0187772_10003701	All Organisms → cellular organisms → Bacteria	7756	Open in IMG/M
3300018088\|Ga0187771_10672152	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300022208\|Ga0224495_10090261	Not Available	1348	Open in IMG/M
3300025951\|Ga0210066_1104195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	500	Open in IMG/M
3300026122\|Ga0209926_1045925	Not Available	757	Open in IMG/M
3300027715\|Ga0208665_10266331	Not Available	538	Open in IMG/M
3300027716\|Ga0209682_10053452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Mitsuaria → unclassified Mitsuaria → Mitsuaria sp. 7	981	Open in IMG/M
3300027778\|Ga0209464_10027548	Not Available	1812	Open in IMG/M
3300027818\|Ga0209706_10068924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1774	Open in IMG/M
3300027831\|Ga0209797_10061290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Mitsuaria → unclassified Mitsuaria → Mitsuaria sp. 7	1666	Open in IMG/M
3300027831\|Ga0209797_10263913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Mitsuaria → unclassified Mitsuaria → Mitsuaria sp. 7	721	Open in IMG/M
3300027871\|Ga0209397_10012710	All Organisms → cellular organisms → Bacteria → Proteobacteria	2364	Open in IMG/M
3300027871\|Ga0209397_10145930	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300027871\|Ga0209397_10209768	Not Available	899	Open in IMG/M
3300027877\|Ga0209293_10222861	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300027877\|Ga0209293_10704375	Not Available	535	Open in IMG/M
3300027885\|Ga0209450_10013180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4503	Open in IMG/M
3300027885\|Ga0209450_10064413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2317	Open in IMG/M
3300027885\|Ga0209450_10065451	Not Available	2301	Open in IMG/M
3300027890\|Ga0209496_10597268	Not Available	596	Open in IMG/M
3300027897\|Ga0209254_10006443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium GJ-E10	10823	Open in IMG/M
3300027897\|Ga0209254_10185993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax delafieldii → Acidovorax delafieldii 2AN	1672	Open in IMG/M
3300027897\|Ga0209254_10281463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300027897\|Ga0209254_10441681	Not Available	954	Open in IMG/M
3300027899\|Ga0209668_10064012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2029	Open in IMG/M
3300027899\|Ga0209668_10143287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300027900\|Ga0209253_10006819	All Organisms → cellular organisms → Bacteria → Proteobacteria	9876	Open in IMG/M
3300027900\|Ga0209253_10007016	All Organisms → cellular organisms → Bacteria	9730	Open in IMG/M
3300027900\|Ga0209253_10016428	All Organisms → cellular organisms → Bacteria → Proteobacteria	6291	Open in IMG/M
3300027900\|Ga0209253_10183875	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300027900\|Ga0209253_10839285	Not Available	649	Open in IMG/M
3300027902\|Ga0209048_10000799	All Organisms → cellular organisms → Bacteria → Proteobacteria	33468	Open in IMG/M
3300027902\|Ga0209048_10004816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12860	Open in IMG/M
3300027902\|Ga0209048_10056285	Not Available	3182	Open in IMG/M
3300027902\|Ga0209048_10060768	Not Available	3037	Open in IMG/M
3300027902\|Ga0209048_10090050	All Organisms → cellular organisms → Bacteria → Proteobacteria	2382	Open in IMG/M
3300027902\|Ga0209048_10278883	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300030606\|Ga0299906_10081214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	2582	Open in IMG/M
3300030620\|Ga0302046_10002718	All Organisms → cellular organisms → Bacteria → Proteobacteria	16376	Open in IMG/M
3300031834\|Ga0315290_10709498	Not Available	866	Open in IMG/M
3300031938\|Ga0308175_100055894	All Organisms → cellular organisms → Bacteria → Proteobacteria	3440	Open in IMG/M
3300032770\|Ga0335085_10090411	All Organisms → cellular organisms → Bacteria	3990	Open in IMG/M
3300032782\|Ga0335082_10310942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1447	Open in IMG/M
3300032829\|Ga0335070_10675050	Not Available	967	Open in IMG/M
3300033407\|Ga0214472_10149566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2288	Open in IMG/M
3300033408\|Ga0316605_10049586	All Organisms → cellular organisms → Bacteria → Proteobacteria	2962	Open in IMG/M
3300033408\|Ga0316605_10197663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1687	Open in IMG/M
3300033408\|Ga0316605_10817498	Not Available	887	Open in IMG/M
3300033408\|Ga0316605_10990119	Not Available	807	Open in IMG/M
3300033408\|Ga0316605_11111411	Not Available	761	Open in IMG/M
3300033408\|Ga0316605_11415721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	674	Open in IMG/M
3300033413\|Ga0316603_11060635	Not Available	766	Open in IMG/M
3300033413\|Ga0316603_11123094	Not Available	744	Open in IMG/M
3300033413\|Ga0316603_12293676	Not Available	509	Open in IMG/M
3300033414\|Ga0316619_10132314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1676	Open in IMG/M
3300033414\|Ga0316619_10377914	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300033414\|Ga0316619_10726591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	841	Open in IMG/M
3300033416\|Ga0316622_100177251	Not Available	2250	Open in IMG/M
3300033416\|Ga0316622_100728194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	1149	Open in IMG/M
3300033416\|Ga0316622_100767697	Not Available	1118	Open in IMG/M
3300033416\|Ga0316622_101350296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	833	Open in IMG/M
3300033418\|Ga0316625_101247021	Not Available	685	Open in IMG/M
3300033418\|Ga0316625_101759170	Not Available	600	Open in IMG/M
3300033418\|Ga0316625_101769833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → endosymbiont of unidentified scaly snail isolate Monju	598	Open in IMG/M
3300033419\|Ga0316601_100191441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1785	Open in IMG/M
3300033419\|Ga0316601_101121138	Not Available	788	Open in IMG/M
3300033419\|Ga0316601_101329392	Not Available	722	Open in IMG/M
3300033419\|Ga0316601_102580190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	511	Open in IMG/M
3300033419\|Ga0316601_102644701	Not Available	504	Open in IMG/M
3300033433\|Ga0326726_10919491	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300033433\|Ga0326726_12445478	Not Available	507	Open in IMG/M
3300033482\|Ga0316627_100019620	All Organisms → cellular organisms → Bacteria → Proteobacteria	3487	Open in IMG/M
3300033482\|Ga0316627_100393758	Not Available	1186	Open in IMG/M
3300033482\|Ga0316627_100400264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1178	Open in IMG/M
3300033482\|Ga0316627_100493204	Not Available	1085	Open in IMG/M
3300033482\|Ga0316627_101714591	Not Available	643	Open in IMG/M
3300033483\|Ga0316629_10285966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1105	Open in IMG/M
3300033483\|Ga0316629_11057345	Not Available	641	Open in IMG/M
3300033487\|Ga0316630_10009652	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4750	Open in IMG/M
3300033487\|Ga0316630_10206088	Not Available	1448	Open in IMG/M
3300033488\|Ga0316621_10277074	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300033521\|Ga0316616_100281784	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300033521\|Ga0316616_101913863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	783	Open in IMG/M
3300033521\|Ga0316616_101998652	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300033557\|Ga0316617_100066158	Not Available	2353	Open in IMG/M
3300033557\|Ga0316617_101234848	Not Available	743	Open in IMG/M
3300033557\|Ga0316617_101653232	Not Available	650	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.13%
Host-Associated	Host-Associated	3.23%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	50.97%
Terrestrial	Environmental → Terrestrial	45.16%
Plants	Host-Associated → Plants	3.23%
Wastewater	Engineered → Wastewater	0.65%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	44.52%
Soil	Environmental → Terrestrial → Soil	40.00%
Marine	Environmental → Aquatic → Marine	3.87%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.87%
Sediment	Environmental → Aquatic → Sediment	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Peat	Environmental → Terrestrial → Peat	1.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.29%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.65%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	34.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.42%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	9.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.52%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.23%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Lake	Environmental → Aquatic → Freshwater → Lake	1.29%
Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer	1.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.29%
Sediment	Environmental → Aquatic → Marine → Sediment	0.65%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.65%
Loam	Environmental → Terrestrial → Soil → Loam	0.65%
Sand	Environmental → Terrestrial → Soil → Sand	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	34.19%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	16.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	16.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	9.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.23%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.58%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified	1.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.29%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	27.74%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	16.77%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	14.19%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	7.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.16%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.58%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.58%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.29%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.29%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.29%
Deep Subsurface Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Deep Subsurface Aquifer	1.29%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.29%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.65%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.65%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.65%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300007351	Combined Assembly of Gp0115775, Gp0115815	Environmental	Open in IMG/M
3300007352	Deep subsurface aquifer microbial community from Lead, South Dakota (DUSEL-D aquifer)	Environmental	Open in IMG/M
3300007764	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010997	ECM15MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013122 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3m	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300025951	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026122	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1017271531	3300001213	Wetland	MMTIELNVAQRDLLKRILDSYLSELRQEIAATKRDTSPLHAEEILVNELQKKVSEVK*
JGIcombinedJ13530_1063275331	3300001213	Wetland	MIEVSVAERDLLKKILDSYLSELRGAIAATKRDTSPLHAEENLVRGLQKKVSEVT*
JGIcombinedJ13530_1091640101	3300001213	Wetland	MNIELTVAERDLLKKILDSYLSELRGAIAATKRDTSPLHVEENLVNDLQRKVSAVA*
Ga0031656_100415512	3300003858	Freshwater Lake Sediment	MIIEVSVAERDLLKKILDSYLSELRHEIAATKRDTSPLHDEENLLKGLQKKVSELK*
Ga0031653_100447532	3300003859	Freshwater Lake Sediment	MMIEVSVAERDLLKKILDSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSETT*
Ga0031654_100195532	3300003861	Freshwater Lake Sediment	MKMEVNVAERDLLKKILDSYLSELRQEIAATKRETSNLHAEENLVKELQKKVSELT*
Ga0031654_100447113	3300003861	Freshwater Lake Sediment	MMIEVSVAERDLLKKILDSYLSELRGAIAATKRETSPLHAEEDLVKDLQKKVSEVT*
Ga0031654_100791182	3300003861	Freshwater Lake Sediment	MMIQVSVAERDLLKKILDSYLSELRQEIAATKRDTLPLHGEENLIKELQKKVSEVT*
Ga0031654_100942802	3300003861	Freshwater Lake Sediment	MMIEVSVAERDLLKRILDSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSEVT*
Ga0070659_1010598191	3300005366	Corn Rhizosphere	MTIELTIAERDLLNKVLDSYLSELRNEIAATKRDTAPLHAEEDLINELQARLSQLT*
Ga0070735_103544162	3300005534	Surface Soil	MTVDLTTAERDLLKKILDSYLSELRHDIAATKRDTDTLHAEERVINALQKKLAETR*
Ga0066903_1025752022	3300005764	Tropical Forest Soil	VLTLELNPAERDLLKRILGSYLSDLRQAIAATKRDTSLLHAEENLVKDLQRRLSEQTP*
Ga0074472_114547993	3300005833	Sediment (Intertidal)	MMIEVSVTERDLLKKILDSYLSELRGAIAATKRDTSPLHAEENLVKGLQKKVSEVT*
Ga0081539_100083064	3300005985	Tabebuia Heterophylla Rhizosphere	MTIELSAAERDLLKKVLDSYLSDLRYTIAATKRGTADLHTEEDLIKGLQMRI*
Ga0079037_1000150794	3300006224	Freshwater Wetlands	MMIEISAAERDLLKKILESYVSELRQTIAATKRETSPLHVEEDLVKGLQRKLTTAA*
Ga0079037_1000172544	3300006224	Freshwater Wetlands	MMIEVSVVERDLLKKILDSYLSELRQAIAATKRDTSHLHEEENLVKALQTKFSEVT*
Ga0079037_1000502762	3300006224	Freshwater Wetlands	MTIELSAAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENMIKGLQQRLS*
Ga0079037_1000921883	3300006224	Freshwater Wetlands	MTIELSPAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENMIKGLQQKLS*
Ga0079037_1001146483	3300006224	Freshwater Wetlands	MMIEVGEAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVAEVT*
Ga0079037_1001271404	3300006224	Freshwater Wetlands	MILEVTVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVKDLQKKVSEVT*
Ga0079037_1002689203	3300006224	Freshwater Wetlands	MMMEIVDKERDLLKKILDSYLSELRLEVAATKRSTSSLHEEEEIVKGLQKKVAELK*
Ga0079037_1007257341	3300006224	Freshwater Wetlands	MIIELSLAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVNDLQKKVSEVK*
Ga0079037_1008124271	3300006224	Freshwater Wetlands	MMIEVGVAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKV
Ga0079037_1015918152	3300006224	Freshwater Wetlands	MTIELSAAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEEDLIKSLQQRL*
Ga0079037_1018998572	3300006224	Freshwater Wetlands	MTIELNVAERELLKKILGSYLSELRQAIAATKRDTSPLHAEEDLVRELQKRVSAAA*
Ga0079037_1019051343	3300006224	Freshwater Wetlands	DLLKKILGSYLSELRQAIAATKRDTSPLHAEESLVKELQKKVSEVM*
Ga0079037_1020558691	3300006224	Freshwater Wetlands	MMLELVAKEQDLLKKILDSYLSELRLEVAATKRSTSSLHEEEELVKGLQKKVAELK*
Ga0079037_1024461421	3300006224	Freshwater Wetlands	AERDLLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVT*
Ga0079303_103676502	3300006930	Deep Subsurface	MMIEVSVAERDLLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVT*
Ga0079303_103937542	3300006930	Deep Subsurface	MMIELSVAERDLLKKILGSYLSELRQAIAATKRDTSPLHAEESLVKELQKKVSEVM*
Ga0079303_104840612	3300006930	Deep Subsurface	MTIELSAAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENLIKSLQQRL*
Ga0073932_11943822	3300007072	Hot Spring Sediment	MTIELSAQERALLKKALDPYLSDLQQAIAASKRDTSALHAEEDLVKALLGKLAAG*
Ga0104751_10412001	3300007351	Deep Subsurface Aquifer	MIIDLSAMERDLLKKLLDSHLAELRLEIAATKRGTSSLHEEEEILKGLQKKISELK*
Ga0104756_10772901	3300007352	Deep Subsurface Aquifer	MIIDLSAMERDLLKKLLDSHLAELRLEIAATKRGTSSLHEEEEILKGLQKKISELK
Ga0102950_10092302	3300007764	Soil	VITIEIDLAGRDFLQKILDSHLSELRNEIAATKRDTSPLHAEEDLIKQLKLKLSKPA*
Ga0105106_106767762	3300009078	Freshwater Sediment	MHGKDTVMMLEMSVAERDLLKKILDSYLSELRHAIAATKRDTSALHAEENLVDELKRKLSGLG*
Ga0102851_101195123	3300009091	Freshwater Wetlands	MMIEVSVVERDLLKKILDSYLSELRQAIAATKRDTSHLHEEENLVKALQTKISEVT*
Ga0102851_102665562	3300009091	Freshwater Wetlands	MIEVGVAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVAEVT*
Ga0102851_106719131	3300009091	Freshwater Wetlands	MTFELSPAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENMIKGLQQKLS*
Ga0102851_123936992	3300009091	Freshwater Wetlands	MDMMLELVAKEQDLLKKILDSYLSELRLEVAATKRSTSSLHEEEELVKGLQKKVAELK*
Ga0102851_129601431	3300009091	Freshwater Wetlands	LLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVT*
Ga0115026_104754612	3300009111	Wetland	MIIELSLAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVAQAT*
Ga0115027_107000541	3300009131	Wetland	MILEVSVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVKDLQKKVSEVT*
Ga0115027_108536001	3300009131	Wetland	MIEVSVVERDLLKKILDSYLSELRQAIAATKRDTSHLHEEENLVKALQTKFSEVT*
Ga0114129_126041223	3300009147	Populus Rhizosphere	MKIEVNVTERDLLQKILVSYLSELRQAIAATKRDTSLLHQEETLLKELQKRFSEA
Ga0113563_102247893	3300009167	Freshwater Wetlands	MMIEVSVAERDLLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVM*
Ga0113563_102954484	3300009167	Freshwater Wetlands	MILEVTVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVKDLQ
Ga0113563_109434772	3300009167	Freshwater Wetlands	LLKKILDSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSDVT*
Ga0115028_101904391	3300009179	Wetland	MIEVSVVERDLLKKILDSYLSELRQAIAATKRDTSHLHEEENLVKALQTKISEVT*
Ga0115028_106949692	3300009179	Wetland	MMIEVSVAERDLLKKILGSYLAELRQAIAATKRDTSQLHAEEDLVKELQRKVSEVM*
Ga0115028_116889022	3300009179	Wetland	MTIQMSPAERDLLQKILDSYLSELRQAIAATKRDTSPLHAEEDLIKELQKKVSGLT*
Ga0118657_102755042	3300009506	Mangrove Sediment	MTIELSAAERDLLKKILDSYLSELRLDIAATKRGTSPLHEEEEVVKGLQKKLS*
Ga0123573_100247038	3300009509	Mangrove Sediment	MTIDLSSAERNLLQKILDSYLSELRQAIAATKRDTSPLHDEENLIKAMQLKLA*
Ga0105073_10592311	3300009802	Groundwater Sand	MVMMIEVSVAERDLLKKILDSYLSELRHEIAATKRGTSRLHEEEDAVTGLQKKVS
Ga0130016_1000239722	3300009868	Wastewater	MTIELSPVERSLLKKVLDSYLSELRQEIAATKRDTSPLHDEENLIKALQQKLS*
Ga0136852_120667951	3300010412	Mangrove Sediment	MVLELNARERDLLKKILESYLSELRLEVAATKRGTSSLHEEEDALVGLLKRMSELK*
Ga0139324_10898451	3300010997	Sediment	SGAMTIVLSSAERSRLQKILDAYLSELRQAIAATKRDTSPLHDEENLIKALQRKLS*
Ga0126375_120020381	3300012948	Tropical Forest Soil	MLTIELSLAERDLLEKILGSYLSDLRQAIAATKRDTSVLHAEEDLVTDLQRRLSE
(restricted) Ga0172374_10255532	3300013122	Freshwater	MNIEINAIEQDLLKKILSSYLSELRLEVAATKRGTSSLHEEEGIVKGLQEKISVT*
Ga0157372_120169012	3300013307	Corn Rhizosphere	MTIDLTIAERDLLKKILDSYLAELRHDIAATKRDTATLHAEESLINELQRRLAQTM*
Ga0132255_1018006192	3300015374	Arabidopsis Rhizosphere	MLTIELSLAERELLKKVLGSYLSALRQAIAATKRDTSSLHAEENLIKD
Ga0187779_100539795	3300017959	Tropical Peatland	MIMDLSAAERDQLKKMIDSYLSELRLEVAATKRDTSSLHGEEELVKGLQKKISELK
Ga0187779_103149941	3300017959	Tropical Peatland	MMMDLSAAERELLKKILSSYLSELRLEIAATKRSTSPLHEEEELVKGLQKKVSELK
Ga0187778_100217492	3300017961	Tropical Peatland	VIKIEMSVAERDLLAKILDSYLAELRHEIAATKRDTSRLHEEENLVNELKRKLSQIA
Ga0187778_107493401	3300017961	Tropical Peatland	VIKIEMSVAERDLLAKILDSYLAELRHEIAATKRDTSRLHDEENLVNELKRKLSEIA
Ga0187776_101380921	3300017966	Tropical Peatland	VIIELSATERDLLKRILDAHLSELRLEIAATKRDTSSLHQEEELVKGLQKKVSELK
Ga0187773_108631861	3300018064	Tropical Peatland	VIIELSATERDLLKRILDAHLSELRIEIAATKRDTSSLHQEEELVKGLQKKVSELK
Ga0187772_100037013	3300018085	Tropical Peatland	VIKIEMSVAERDLLAKILDSYLAELRHEIAATKRDTSHLHDEENLVNELKRKLSEIA
Ga0187771_106721522	3300018088	Tropical Peatland	ISVAERDLLAKILDSYLAELRHAIAATKRDTSRLHEEENLVNELKRKLSEIA
Ga0224495_100902612	3300022208	Sediment	MILEMNATERDLLKKLLDSYLSELRLEIAATKRGTSSLHEEEELVKGLQKKISELK
Ga0210066_11041951	3300025951	Natural And Restored Wetlands	MIMEVNATERDLLKKILDSQLSELRLEVAATKRGTSSLHEEEELIKTLQKKVASLN
Ga0209926_10459251	3300026122	Soil	VITIEIDLAGRDFLQKILDSHLSELRNEIAATKRDTSPLHAEEDLIKQLKLKLSKPA
Ga0208665_102663311	3300027715	Deep Subsurface	MMIELSVAERDLLKKILGSYLSELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVM
Ga0209682_100534524	3300027716	Wetland Sediment	MMIELSVPERDLLKKILDSFLSELRQAIAATKRDTSPLHAEENLVKELQKKVSK
Ga0209464_100275481	3300027778	Wetland Sediment	MMIELSVPERDLLKKILDSFVSELRQAIAATKRDTSPLHAEENLVKELQKKVSK
Ga0209706_100689242	3300027818	Freshwater Sediment	MHGKDTVMMLEMSVAERDLLKKILDSYLSELRHAIAATKRDTSALHAEENLVDELKRKLSGLG
Ga0209797_100612904	3300027831	Wetland Sediment	MMIELSVPERDLLKKILDSFVSELRQAIAATKRDTSPLHAEENLVKELQRKVSK
Ga0209797_102639133	3300027831	Wetland Sediment	CTMMIELSVPERDLLKKILDSFLSELRQAIAATKRDTSPLHAEENLVKELQKKVSK
Ga0209579_100017405	3300027869	Surface Soil	MTVDLTTAERDLLKKILDSYLSELRHDIAATKRDTDTLHAEERVINALQKKLAETR
Ga0209397_100127101	3300027871	Wetland	MMIEISAAERDLLKKILESYVSELRQTIAATKRETSPLHVEEDLVKGLQRKLTTAA
Ga0209397_101459302	3300027871	Wetland	MTFELSPAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENMIKGLQQKLS
Ga0209397_102097681	3300027871	Wetland	MMIEVGVAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVAEVT
Ga0209293_102228612	3300027877	Wetland	MMMEIVDKERDLLKKILDSYLSELRLEVAATKRSTSSLHEEEEIVKGLQKKVAELK
Ga0209293_107043751	3300027877	Wetland	RCARRRCPVMMIEVGEAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVAQAT
Ga0209450_100131802	3300027885	Freshwater Lake Sediment	MTIELSSAERGLLKKILDSYLSELRQEIAATKRDTSPMHDEENLIKGLQQKL
Ga0209450_100644132	3300027885	Freshwater Lake Sediment	MMTIDLSPAERGLLKKILDSYLSELRQEIAATKRDTSPLHEEEILIKGLQQRL
Ga0209450_100654512	3300027885	Freshwater Lake Sediment	MIIEVSVAERDLLKKILDSYLSELRHEIAATKRDTSPLHDEENLLKGLQKKVSELK
Ga0209496_105972681	3300027890	Wetland	MMIEVSVVERDLLKKILDSYLSELRQAIAATKRDTSHLHEEENLVKALQTKISEVT
Ga0209254_100064435	3300027897	Freshwater Lake Sediment	MTIELSPAERGLLKKILDSYLSELRQEIAATKRDTSPMHDEENLIKGLLQKL
Ga0209254_101859933	3300027897	Freshwater Lake Sediment	MMIEVSVAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVRGLQKKVSEVT
Ga0209254_102814633	3300027897	Freshwater Lake Sediment	MMIEVSVAERDLLKKILDSYLSELRGAIAATKRDTSPLHAEENLVKDLQRKMSEVT
Ga0209254_104416811	3300027897	Freshwater Lake Sediment	MTTIDVSAAEVDLLKKVLESYLSELRHEIAATKRDTAPLHGEESLVKQLQEKLSKAT
Ga0209668_100640122	3300027899	Freshwater Lake Sediment	MTIELSAAERTLLKRVLDSYLSELRQAIAATKRDTSPLHDEENLIKGLQQKL
Ga0209668_101432872	3300027899	Freshwater Lake Sediment	MTIEMSSAERDLLQKILDSYLSELRQEIAATKRHTSPLHDEENLIKGLQHKLS
Ga0209253_100068196	3300027900	Freshwater Lake Sediment	MMIEVSVAERDLLKKILDSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSETT
Ga0209253_100070165	3300027900	Freshwater Lake Sediment	MMIEVSLAERDLLKKILDSYLSELRQAIAATKRDTAPLHAEENLVKVLQKKVSEVA
Ga0209253_100164282	3300027900	Freshwater Lake Sediment	MMIEVSVAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVSEVT
Ga0209253_101838752	3300027900	Freshwater Lake Sediment	MMIQVSVAERDLLKKILDSYLSELRQEIAATKRDTLPMHGEENLIRELQKKVSEVT
Ga0209253_108392852	3300027900	Freshwater Lake Sediment	MMIEISAAERDLLKKILESYVSELRQTIAATKRETSPLHVEEDLVKGLQGKLTTAA
Ga0209048_1000079915	3300027902	Freshwater Lake Sediment	MMIQVSVAERDLLKKILDSYLSELRQEIAATKRDTLPLHGEENLIKELQKKVSEVT
Ga0209048_100048166	3300027902	Freshwater Lake Sediment	MKMEVNVAERDLLKKILDSYLSELRQEIAATKRETSNLHAEENLVKELQKKVSELT
Ga0209048_100562852	3300027902	Freshwater Lake Sediment	MMIEVSMAERDLLMKILDSYLSELRGAIAATKRDTLPLHAEENLINGLQKKFSEMT
Ga0209048_100607682	3300027902	Freshwater Lake Sediment	MMIEVSVAERDLLKRILDSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSEVT
Ga0209048_100900504	3300027902	Freshwater Lake Sediment	MMIEVSVAERDLLKKILDSYLSELRGAIAATKRETSPLHAEEDLVKDLQKKVSEVT
Ga0209048_102788832	3300027902	Freshwater Lake Sediment	MKIEVSVAERDLLKKILNSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSEVA
Ga0299906_100812144	3300030606	Soil	MVIELSLAERELLKKILESYLSELRHAIAATKRDTSNLHGEEDLVKALQKKVSEAT
Ga0302046_1000271819	3300030620	Soil	MMLEMSVAERDVLKKILDSYLSELRHAIAATNRDTSPLHAEENLVNELKRKLSELR
Ga0315290_107094982	3300031834	Sediment	MMIEVSVAERDLLKKILDSYLSELRQAIAATKRDTLPLHAEENMVKELQKKVSGVT
Ga0308175_1000558942	3300031938	Soil	MMIDLTVEERDLLMKILDSYVSELRLDIAATKRRTSPLHADEELINVLQRKLSQAT
Ga0335085_100904115	3300032770	Soil	MIIELSAAERDLLKKILDSYLSELRLEVAATKRDTSSLHGEEELLKGLQKKVSELK
Ga0335082_103109421	3300032782	Soil	ERDLLKKILDSYLSELRLEVAATKRDTSSLHGEEELLKGLQKKVSELK
Ga0335070_106750502	3300032829	Soil	MAIQLSSAERDLLKKILDSYLADLRQAIAATKRDTSALHAEESQVKELQRKVSEAT
Ga0214472_101495661	3300033407	Soil	MVIELSLAERELLKKILESYLSELRQVIAATKRDTSNLHGEEDLVKALQKKVSEAT
Ga0316605_100495864	3300033408	Soil	MMIEVSVVERDLLKKILDSYLSELRQAIAATKRDTSHLHEEENLVKALQTKFSEVT
Ga0316605_101976633	3300033408	Soil	MILEVTVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVKDLQKKVSEVT
Ga0316605_108174981	3300033408	Soil	MIMEVNATERDLLKKILDSQLSELRLEVAATKRGTSSLHEEEELIKALQKKVASLN
Ga0316605_109901191	3300033408	Soil	MMIEVSVAERALLKKILDSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSDVT
Ga0316605_111114112	3300033408	Soil	MMFEVSLAERDLLKKILESYLSELRQAIAATKRDTSPLHAEENLVKELQKKVSALA
Ga0316605_114157211	3300033408	Soil	MIMEVNATERDLLKKILDSQLSELRLEVAATKRGTSSLHEEEELIKALQKKVSGLN
Ga0316603_110606352	3300033413	Soil	RALLKKILDSYLSELRGAIAATKRETSPLHAEENLVKDLQKKVSDVT
Ga0316603_111230941	3300033413	Soil	MIIELSVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVNDLQKKVSEVK
Ga0316603_122936761	3300033413	Soil	MTIQLSVAERELLTKILSSYLGELRQAIAATKRDTASLHAEEELIGELQRKLSAAT
Ga0316619_101323143	3300033414	Soil	MMTELSVAERDLLKKILGSYLSELRQAIAATKRDTSPLHAEESLVKELQKKVSEVM
Ga0316619_103779141	3300033414	Soil	MMIEVNVAERDLLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVM
Ga0316619_107265911	3300033414	Soil	AERELLTKILSSYLGELRQAIAATKRDTASLHAEEELIGELQRKLSAAT
Ga0316622_1001772512	3300033416	Soil	MTIELSSAERGLLKKILDSYLSELRQEIAATKRDTSPMHDEENLIKGLLQKL
Ga0316622_1007281942	3300033416	Soil	MTIQVSPAERDLLQKILDSYLSELRQAIAATKRDTSPLHAEEDLIKELQKKVSGLT
Ga0316622_1007676971	3300033416	Soil	MMIEVSVAERDLLKKILGSYLSELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVM
Ga0316622_1013502963	3300033416	Soil	MMIEVGEAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGL
Ga0316625_1012470211	3300033418	Soil	MMTMELSTAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVKDLQKKVAAAT
Ga0316625_1017591702	3300033418	Soil	MAIGRWPVMTIQVSPAERDLLQKILDSYLSELRQAIAATKRDTSPLHAEEDLIKELQKKVSGLT
Ga0316625_1017698331	3300033418	Soil	AERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVNDLQKKVSEVK
Ga0316601_1001914412	3300033419	Soil	MMIEVGEAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVAQAT
Ga0316601_1011211381	3300033419	Soil	MMIEVSVAERDLLKKILGSYLSELRQAIAATKRDTSHLHAEEDLVKALQRKVSEVM
Ga0316601_1013293922	3300033419	Soil	LSPAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENMIKGLQQKLS
Ga0316601_1025801902	3300033419	Soil	MIMEVTATERDLLKKILDSQLSELRLEVAATKRGTSSLHEEEELIKALQKKVASLN
Ga0316601_1026447011	3300033419	Soil	RWRCTRMMFEVSLAERDLLKKILESYLSELRQAIAATKRDTSPLHAEENLVKELQKKVSALA
Ga0326726_109194912	3300033433	Peat Soil	MKLELSVTERDLLKKILDSYLSELRQEIAATKRATSPLHAEENLVNALQKKLSEGM
Ga0326726_124454781	3300033433	Peat Soil	RTGCAVMMMDVSVAERDLLRKILDSYLSELRQEIAATKRDTSHLHAEENLIKELQKKVSDVT
Ga0316627_1000196205	3300033482	Soil	MMIEVGVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVNDLQKKVSEV
Ga0316627_1003937582	3300033482	Soil	MILEVSVAERDLLKKILDSYLSELRQAIAATKRDTSPLHAEENLVKDLQKKVSEVT
Ga0316627_1004002641	3300033482	Soil	MTIELSPAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENMIKGLQQKLS
Ga0316627_1004932042	3300033482	Soil	MTIQMSPAERDLLQKILDSYLSELRQAIAATKRDTSPLHAEEDLIKELQKKVSGLT
Ga0316627_1017145911	3300033482	Soil	VMMIEVSVAERDLLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVT
Ga0316629_102859663	3300033483	Soil	MMIEVSVAERDLLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVM
Ga0316629_110573451	3300033483	Soil	MMIEVGVAERDLLKKILDSYLSELRGAIAATKRDTSSLHAEENVVKGLQKKVAQAT
Ga0316630_100096521	3300033487	Soil	MMTELSVAERDLLKKILGSYLSELRQAIAATKRDTSHLHAEEDLVKALQRKVSEVM
Ga0316630_102060882	3300033487	Soil	MMIEVNVAERDLLKKILGSYLAELRQAIAATKRDTSHLHAEEDLVKELHRKVSEVTSRLVGP
Ga0316621_102770742	3300033488	Soil	MTIELNVAERELLKKILGSYLSELRQAIAATKRDTSPLHAEEDLVRELQKRVSAAA
Ga0316616_1002817841	3300033521	Soil	ERDLLKKILGSYLSELRQAIAATKRDTSHLHAEEDLVKELQRKVSEVM
Ga0316616_1019138631	3300033521	Soil	PAERDLLQKILDSYLSELRQAIAATKRDTSPLHAEEDLIKELQKKVSGLT
Ga0316616_1019986522	3300033521	Soil	MTIQLSVAERELLTKILSSYLGELRQAIAATKRDTASLHAEEELIVELQMKLSAVT
Ga0316617_1000661582	3300033557	Soil	MTIELSAAERSLLKKVLDSYLSELRQAIAATKRDTSPLHDEENMIKGLQQRLS
Ga0316617_1012348482	3300033557	Soil	MIMEVTAAERDLLKKILDSQLSELRLEVAATKRGTSSLHEEEELIKALQKKVASLN
Ga0316617_1016532321	3300033557	Soil	MAIGRWPVMTIQMSPAERDLLQKILDSYLSELRQAIAATKRDTSPLHAEEDLIKELQKKVSGLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters