NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300007352

3300007352: Deep subsurface aquifer microbial community from Lead, South Dakota (DUSEL-D aquifer)



Overview

Basic Information
IMG/M Taxon OID3300007352 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0114793 | Gp0115775 | Ga0104756
Sample NameDeep subsurface aquifer microbial community from Lead, South Dakota (DUSEL-D aquifer)
Sequencing StatusPermanent Draft
Sequencing CenterNational Aeronautics and Space Administration (NASA)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size513212813
Sequencing Scaffolds2
Novel Protein Genes3
Associated Families3

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSanford Underground Research Facility - Deep Subsurface Aquifer Microbial Community From Lead, South Dakota
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Deep Subsurface Aquifer → Sanford Underground Research Facility - Deep Subsurface Aquifer Microbial Community From Lead, South Dakota

Alternative Ecosystem Assignments
Environment Ontology (ENVO)terrestrial biomeaquifergroundwater
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Subsurface (non-saline)

Location Information
LocationLead, South Dakota, USA
CoordinatesLat. (o)44.03416667Long. (o)-103.76583333Alt. (m)N/ADepth (m)N/A
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

Associated Scaffolds

Sequences


 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.