Metagenome Family F043603

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F043603
Family Type	Metagenome
Number of Sequences	156
Average Sequence Length	57 residues
Representative Sequence	MNNIAQTRTTRLETALSASYVLPSMLALNTVALLALDQLGGIPQWVKTAAALFLSF
Number of Associated Samples	120
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.82 %
% of genes near scaffold ends (potentially truncated)	14.10 %
% of genes from short scaffolds (< 2000 bps)	69.87 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.795 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.590 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.949 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF02954	HTH_8	31.41
PF13581	HATPase_c_2	27.56
PF13492	GAF_3	5.77
PF01740	STAS	5.13
PF10728	DUF2520	2.56
PF13185	GAF_2	2.56
PF01476	LysM	0.64
PF13676	TIR_2	0.64
PF13505	OMP_b-brl	0.64
PF02325	YGGT	0.64
PF12911	OppC_N	0.64
PF09594	GT87	0.64
PF13229	Beta_helix	0.64
PF01028	Topoisom_I	0.64
PF13478	XdhC_C	0.64
PF10727	Rossmann-like	0.64
PF12146	Hydrolase_4	0.64
PF00378	ECH_1	0.64
PF00071	Ras	0.64
PF02826	2-Hacid_dh_C	0.64
PF00596	Aldolase_II	0.64
PF12833	HTH_18	0.64
PF00535	Glycos_transf_2	0.64
PF16124	RecQ_Zn_bind	0.64
PF12695	Abhydrolase_5	0.64
PF01523	PmbA_TldD	0.64
PF07578	LAB_N	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.64
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.64
COG3952	Uncharacterized N-terminal domain of lipid-A-disaccharide synthase	General function prediction only [R]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.79 %
Unclassified	root	N/A	2.56 %
Viruses	superkingdom	All Organisms → Viruses	0.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.79 %
Unclassified	root	N/A	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.18 %
Unclassified	root	N/A	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.64 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.97 %
Unclassified	root	N/A	2.56 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	0.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.97 %
Unclassified	root	N/A	2.56 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.97 %
Unclassified	root	N/A	2.56 %
Thermoanaerobaculaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae	0.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.97 %
Unclassified	root	N/A	2.56 %
Thermoanaerobaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum	0.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.97 %
Unclassified	root	N/A	2.56 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	0.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.64 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_3154898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300000956\|JGI10216J12902_105303483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1474	Open in IMG/M
3300002896\|JGI24802J43972_1006544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300003267\|soilL1_10036395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1449	Open in IMG/M
3300003315\|P22013IDBA_10000283	All Organisms → cellular organisms → Bacteria	33925	Open in IMG/M
3300003319\|soilL2_10048179	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300003319\|soilL2_10199452	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300004114\|Ga0062593_100897196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300004463\|Ga0063356_100593691	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300004463\|Ga0063356_103678942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300004463\|Ga0063356_106400643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300004479\|Ga0062595_102118719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300004643\|Ga0062591_100810255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300005293\|Ga0065715_10169333	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300005294\|Ga0065705_10582809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300005295\|Ga0065707_10521030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300005327\|Ga0070658_10418441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300005340\|Ga0070689_100197179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1642	Open in IMG/M
3300005343\|Ga0070687_100002164	All Organisms → cellular organisms → Bacteria	7264	Open in IMG/M
3300005441\|Ga0070700_100000034	All Organisms → cellular organisms → Bacteria	112374	Open in IMG/M
3300005459\|Ga0068867_101223006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300005466\|Ga0070685_10274077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300005471\|Ga0070698_100780213	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005518\|Ga0070699_100387622	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300005549\|Ga0070704_100461321	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005549\|Ga0070704_100893195	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005615\|Ga0070702_100033405	All Organisms → cellular organisms → Bacteria	2829	Open in IMG/M
3300005615\|Ga0070702_100269290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300005617\|Ga0068859_102973937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005836\|Ga0074470_10714115	All Organisms → cellular organisms → Bacteria	13834	Open in IMG/M
3300005840\|Ga0068870_10010985	All Organisms → cellular organisms → Bacteria	4183	Open in IMG/M
3300005840\|Ga0068870_11095149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300006031\|Ga0066651_10000021	All Organisms → cellular organisms → Bacteria	46607	Open in IMG/M
3300006046\|Ga0066652_100380423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1280	Open in IMG/M
3300006169\|Ga0082029_1400243	All Organisms → cellular organisms → Bacteria	51674	Open in IMG/M
3300006196\|Ga0075422_10011636	All Organisms → cellular organisms → Bacteria	2877	Open in IMG/M
3300006755\|Ga0079222_10611624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300006844\|Ga0075428_100018133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	7777	Open in IMG/M
3300006845\|Ga0075421_100049135	All Organisms → cellular organisms → Bacteria → Acidobacteria	5344	Open in IMG/M
3300006845\|Ga0075421_100361768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1751	Open in IMG/M
3300006852\|Ga0075433_11001141	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300006854\|Ga0075425_100004745	All Organisms → cellular organisms → Bacteria	14065	Open in IMG/M
3300006871\|Ga0075434_100227625	All Organisms → cellular organisms → Bacteria	1884	Open in IMG/M
3300006876\|Ga0079217_10149226	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300006876\|Ga0079217_10316698	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300006894\|Ga0079215_10215370	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300006918\|Ga0079216_10044639	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300006918\|Ga0079216_10960477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300007004\|Ga0079218_10404004	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300007004\|Ga0079218_11928380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300007004\|Ga0079218_13606965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009100\|Ga0075418_10134845	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300009100\|Ga0075418_10668953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119	Open in IMG/M
3300009147\|Ga0114129_10763931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300009147\|Ga0114129_12961306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300009156\|Ga0111538_11669699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300009176\|Ga0105242_10004176	All Organisms → cellular organisms → Bacteria	11253	Open in IMG/M
3300009789\|Ga0126307_11093749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300010039\|Ga0126309_10395628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300010044\|Ga0126310_10010761	All Organisms → cellular organisms → Bacteria → Acidobacteria	4247	Open in IMG/M
3300010044\|Ga0126310_10100352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1752	Open in IMG/M
3300010044\|Ga0126310_10360397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300010044\|Ga0126310_11313326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300010045\|Ga0126311_10377714	All Organisms → Viruses → Predicted Viral	1086	Open in IMG/M
3300010045\|Ga0126311_11823117	Not Available	516	Open in IMG/M
3300010399\|Ga0134127_12452749	Not Available	601	Open in IMG/M
3300010399\|Ga0134127_12767638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300010403\|Ga0134123_10000365	All Organisms → cellular organisms → Bacteria	30529	Open in IMG/M
3300010403\|Ga0134123_10263199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1508	Open in IMG/M
3300010403\|Ga0134123_11557325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300011415\|Ga0137325_1042231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300011427\|Ga0137448_1018692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1575	Open in IMG/M
3300012038\|Ga0137431_1183393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012040\|Ga0137461_1017599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300012040\|Ga0137461_1035548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1318	Open in IMG/M
3300012469\|Ga0150984_123291122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300012668\|Ga0157216_10204161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300012896\|Ga0157303_10135816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300013297\|Ga0157378_10931307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300013306\|Ga0163162_10414403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1479	Open in IMG/M
3300014326\|Ga0157380_10856348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300014487\|Ga0182000_10030726	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300014877\|Ga0180074_1007452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1955	Open in IMG/M
3300017965\|Ga0190266_10542920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300018422\|Ga0190265_10138946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2356	Open in IMG/M
3300018429\|Ga0190272_10000046	All Organisms → cellular organisms → Bacteria	96397	Open in IMG/M
3300018432\|Ga0190275_10017051	All Organisms → cellular organisms → Bacteria → Acidobacteria	5547	Open in IMG/M
3300018432\|Ga0190275_11119803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300018432\|Ga0190275_11597751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300018465\|Ga0190269_10020616	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300018465\|Ga0190269_10804721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300018465\|Ga0190269_11189149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300018466\|Ga0190268_11694833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300018469\|Ga0190270_10000019	All Organisms → cellular organisms → Bacteria	131375	Open in IMG/M
3300018469\|Ga0190270_10540052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300018469\|Ga0190270_10630736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300018469\|Ga0190270_12490086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300018476\|Ga0190274_10743969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300018906\|Ga0193609_1049589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300019377\|Ga0190264_10546624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300019767\|Ga0190267_10521621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300020146\|Ga0196977_1000119	All Organisms → cellular organisms → Bacteria	50843	Open in IMG/M
3300020147\|Ga0196976_1000155	All Organisms → cellular organisms → Bacteria	46098	Open in IMG/M
3300020202\|Ga0196964_10023380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2549	Open in IMG/M
3300020215\|Ga0196963_10224656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300021272\|Ga0213899_104704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300021289\|Ga0213903_100792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1849	Open in IMG/M
3300021290\|Ga0213902_103137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300021339\|Ga0193706_1002176	All Organisms → cellular organisms → Bacteria	8203	Open in IMG/M
3300021358\|Ga0213873_10000003	All Organisms → cellular organisms → Bacteria	973849	Open in IMG/M
3300021384\|Ga0213876_10049011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2231	Open in IMG/M
3300021384\|Ga0213876_10060913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1991	Open in IMG/M
3300021968\|Ga0193698_1005350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1579	Open in IMG/M
3300022756\|Ga0222622_10543892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300022756\|Ga0222622_11410675	Not Available	513	Open in IMG/M
3300025324\|Ga0209640_10440898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300025728\|Ga0207655_1030725	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300025907\|Ga0207645_10841162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300025908\|Ga0207643_10111687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1611	Open in IMG/M
3300025917\|Ga0207660_10059547	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300025918\|Ga0207662_10009974	All Organisms → cellular organisms → Bacteria → Acidobacteria	5242	Open in IMG/M
3300025934\|Ga0207686_10049094	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300025936\|Ga0207670_11322606	Not Available	611	Open in IMG/M
3300026075\|Ga0207708_10000010	All Organisms → cellular organisms → Bacteria	227178	Open in IMG/M
3300026306\|Ga0209468_1000011	All Organisms → cellular organisms → Bacteria	144059	Open in IMG/M
3300027075\|Ga0214467_1011803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300027326\|Ga0209731_1058314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300027639\|Ga0209387_1109108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300027640\|Ga0209347_1005836	All Organisms → cellular organisms → Bacteria	11375	Open in IMG/M
3300027761\|Ga0209462_10040838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300027761\|Ga0209462_10062860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300027886\|Ga0209486_10306666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300027886\|Ga0209486_11098208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300027907\|Ga0207428_10000007	All Organisms → cellular organisms → Bacteria	463715	Open in IMG/M
3300027909\|Ga0209382_10000098	All Organisms → cellular organisms → Bacteria	125862	Open in IMG/M
3300027909\|Ga0209382_10302358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1804	Open in IMG/M
3300028744\|Ga0307318_10362356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300028771\|Ga0307320_10164026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300030502\|Ga0268258_10068559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300030510\|Ga0268243_1080311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300031164\|Ga0307502_10042487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300031164\|Ga0307502_10088553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300031164\|Ga0307502_10134997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300031455\|Ga0307505_10001153	All Organisms → cellular organisms → Bacteria	22987	Open in IMG/M
3300031548\|Ga0307408_101574166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300034008\|Ga0334942_000157	All Organisms → cellular organisms → Bacteria	34437	Open in IMG/M
3300034025\|Ga0334940_081416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300034027\|Ga0334949_002200	All Organisms → cellular organisms → Bacteria	7978	Open in IMG/M
3300034139\|Ga0334956_000666	All Organisms → cellular organisms → Bacteria	11425	Open in IMG/M
3300034145\|Ga0334963_000095	All Organisms → cellular organisms → Bacteria	61033	Open in IMG/M
3300034146\|Ga0334964_000050	All Organisms → cellular organisms → Bacteria	110809	Open in IMG/M
3300034146\|Ga0334964_007705	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300034173\|Ga0334925_000047	All Organisms → cellular organisms → Bacteria	82999	Open in IMG/M
3300034221\|Ga0334937_139346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300034760\|Ga0334948_009929	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300034781\|Ga0334935_000459	All Organisms → cellular organisms → Bacteria	18074	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.72%
Host-Associated	Host-Associated	26.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.95%
Plants	Host-Associated → Plants	26.28%
Aquatic	Environmental → Aquatic	5.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.05%
Sediment	Environmental → Aquatic → Sediment	5.77%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.92%
Roots	Host-Associated → Plants → Roots	1.28%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.10%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.77%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	4.49%
Sand	Environmental → Terrestrial → Soil → Sand	3.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.28%
Clay	Environmental → Terrestrial → Deep Subsurface → Clay	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.77%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	4.49%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	3.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.28%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.64%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.64%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.64%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.69%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.13%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.85%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.21%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.28%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.28%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.28%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.64%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.64%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.64%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.64%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.64%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.64%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.64%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018906	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021272	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hamp_Shaw_2	Environmental	Open in IMG/M
3300021289	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_3	Environmental	Open in IMG/M
3300021290	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_2	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027640	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23 (SPAdes)	Environmental	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300030502	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034139	Biocrust microbial communities from Mojave Desert, California, United States - 52SNC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034146	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNS	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0654.00005330	2162886012	Miscanthus Rhizosphere	MNNVAQTRTGTRLESVLSAQYVLPGMLALNTVALFALDRLGGIPEWIKTAAALFLAF
JGI10216J12902_1053034834	3300000956	Soil	MNNIAQTRTTRLESALSASYILPGVLAVNTVALLALDQLGGIPQWIKTAAALFLAF*
JGI24802J43972_10065442	3300002896	Soil	MNNVAQTTRSTRLETALSASYMLPGVLALNTVTLLALDRLGAIPQWVKAAAALFLAF*
soilL1_100363952	3300003267	Sugarcane Root And Bulk Soil	MNNVAQTRNREARLEAVLSASYVLPAMLALNTVALLALDQLGGIPQWVKTAAALFLSF*
P22013IDBA_1000028324	3300003315	Ore Pile And Mine Drainage Contaminated Soil	MNNVAQSRTTRLESVLSAQYVLPSMLALNTVALFALDRLGGIPVWVKTAAALFLAF*
soilL2_100481795	3300003319	Sugarcane Root And Bulk Soil	MNNIAQTRTTKLESALSAAYVLPSMLALNTVALFALDRLGGIPSWVKTAAALFLSF*
soilL2_101994522	3300003319	Sugarcane Root And Bulk Soil	MNNVAQTRNRQAISTTKFEAALSANYVLPGMLALNTVALLALDRLGGIPEWVKAAAALFLAF*
Ga0062593_1008971961	3300004114	Soil	MNNFAQTRTTRLESALSAAYVLPGVLAVNTVALLALDRLGGIPEWIRTAAALFLSF*
Ga0063356_1005936912	3300004463	Arabidopsis Thaliana Rhizosphere	MNNVAQTRSTRLDSALSASYVLPAVLTLNTMALVALDRLGGIPQWVKSAVALFLSF*
Ga0063356_1036789422	3300004463	Arabidopsis Thaliana Rhizosphere	MNNIAQTRTTRYEVALSSSYVLPGLLAVNTVALLALDRLGGVPEWIRTAAALFLSF*
Ga0063356_1064006432	3300004463	Arabidopsis Thaliana Rhizosphere	MNNVAQTRTTRLEVLSSGYVLPAMLAVNTVALVALDYLGGIPQWVRTAAALFLAF*
Ga0062595_1021187191	3300004479	Soil	MNNIAQTRTLRSGQATRIESALSATYVLPALLAVNTVALLALDQIGGIPQWLKAAAALFLAF*
Ga0062591_1008102552	3300004643	Soil	MNNFAQTRTTRLESALSAAYVLPGVLAVNTVALLALDRLGGIPEWIRTAAALF
Ga0065715_101693332	3300005293	Miscanthus Rhizosphere	MNNVAQTRTGTRLESVLSAQYVLPGMLALNTVALFALDRLGGIPEWIKTAAALFLAF*
Ga0065705_105828092	3300005294	Switchgrass Rhizosphere	MGDTMNNIARTTRFESALSATYVLPAVLAVNTVALLALDQIGGIPQWVK
Ga0065707_105210302	3300005295	Switchgrass Rhizosphere	MNNYATTRTTKLESALSAAYVLPGMLALNTVALLALDHLGGIPNWIKTAAALFLAF*
Ga0070658_104184412	3300005327	Corn Rhizosphere	MNNIAQTRTTRLDSALSATYVLPAVLAVNTVALLALNSLGGIPQWIKSAAALFLAF*
Ga0070689_1001971794	3300005340	Switchgrass Rhizosphere	MNNIARTTTKLESTFSTAYVLPGMLAVNTVALLALEQLGGIPSWLKTVTALFLAF*
Ga0070687_1000021647	3300005343	Switchgrass Rhizosphere	MNNIAQTRTTRIESALSATYVLPAVLAVNTVALLALNALGGIPVWIKSAAALFLAF*
Ga0070700_10000003468	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNNIAQTRTTRYEVALSSTYVLPGLLAVNTVALLALDRLGGVPEWIRTAAALFLSF*
Ga0068867_1012230062	3300005459	Miscanthus Rhizosphere	MNNFADTRSSKLESALSANYVLPAILATNTFVLLALDQLGQIPNWVKTAAALFLSF*
Ga0070685_102740772	3300005466	Switchgrass Rhizosphere	MNNIAQTRTTRLDSALSATYVLPAVLAVNTVALLALNSLGGIPQWIKSA
Ga0070698_1007802132	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNNFAQTRTTKFESALSATYVLPGVLAVNTFALLALDSLGGIPEWIKTAAALFLAF*
Ga0070699_1003876222	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNNIAQTRTTRFELTLSGAYVLPGLLAVNTVALLALDRLGGIPEWLRTAAALFLSF*
Ga0070704_1004613211	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RLETVLSAHFALPAILTVNTVALFALDQLGGIPTWIKTAAALFLSF*
Ga0070704_1008931952	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNNIAQTRTRIESTLSATYVLPALLAVNTVALLALDQIGGIPQWLKAAAALFLAF*
Ga0070702_1000334054	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNNAASTRILRASRLESVLSAGYILPSMLALNTVALLALDQLGGIPSWVKAAAALFLAF*
Ga0070702_1002692904	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	KLESALPASYVLPALLAVNTVALLALDRLGGIPEWIRSAAALFLSF*
Ga0068859_1029739371	3300005617	Switchgrass Rhizosphere	MNNFAQTRTTRLESALSASYVLPGVLAVNTVALLALDRLGGIPEWIRTAAALFLSF*
Ga0074470_107141158	3300005836	Sediment (Intertidal)	MNNIAQTRTLRLRSGQATKIESAFSAAYVLPGMLAVNTVALLALDQLGGIPSWLKTITALFLSF*
Ga0068870_100109853	3300005840	Miscanthus Rhizosphere	MKSFAQTTTTKFEAVLSANYVLPGVLAVNTVALLALDRLGGIPEWIRTAAALFLSF*
Ga0068870_110951491	3300005840	Miscanthus Rhizosphere	MNNIAQTRTTRIESALSATYVLPAMLAVNTVALLALDQIGGIPQWLKAAAALFLAF*
Ga0066651_1000002127	3300006031	Soil	MNNFAQTRISKLESAIPAGYVLPALLAVNTVALLALDSLGGIPEWIRSAAALFLSF*
Ga0066652_1003804232	3300006046	Soil	MNNFADTRTTKRESTISANYLLPAILAANTFVLLALDQLGQIPNWIKTVAALFLSF*
Ga0082029_140024349	3300006169	Termite Nest	MNNIAQTRVTRLEAALSASYILPGVLAVNTVALLALDQLGGIPQWVKTAAALFLAF*
Ga0075422_100116365	3300006196	Populus Rhizosphere	MNNIAQTRTTRIESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF*
Ga0079222_106116241	3300006755	Agricultural Soil	MNNIAQTRTTRIESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKAAAAL
Ga0075428_1000181335	3300006844	Populus Rhizosphere	MNNIAQTRILQPRSGQAAATKLESAFSTAYLLPGMLAVNTVALLALDQLGGIPEWIKTVASLFLSF*
Ga0075421_1000491354	3300006845	Populus Rhizosphere	MNNIAQTRTTRLETVLSASYILPSMLALNTVALLALDQLGGIPQWVKTAAALFLGF*
Ga0075421_1003617681	3300006845	Populus Rhizosphere	MNNIAQTRILRPRSGQAAATKLESAFSTAYVLPGMLAVNTVALLALDQLGGIPNWIKTAASLFLAF*
Ga0075433_110011412	3300006852	Populus Rhizosphere	MNNFAETRTTKLESALSPSYLLPAILAANTFVLLALDQLGQIPNWIKTAAALFLSF*
Ga0075425_1000047456	3300006854	Populus Rhizosphere	MTNFVQTRTSRFEAVLSAQYALPAILTVNTVALFALDRLGGIPNWIKAAAALFLSF*
Ga0075434_1002276254	3300006871	Populus Rhizosphere	MNNFAQTRISKLESALPASYVLPGLLAVNTVALLALDRLGGIPEWIRSAVALFLSF*
Ga0079217_101492262	3300006876	Agricultural Soil	MNNIAQTRTTRLESALSASYSLPGVLAVNTVALLALDQLGGIPQWIKTAAALFLAF*
Ga0079217_103166981	3300006876	Agricultural Soil	PRPIRGDTMNNIAQTRSTRIESALSATYVLPAMLAVNTVALLALDQIGGIPQWLKAAAALFLAF*
Ga0079215_102153703	3300006894	Agricultural Soil	LESALSASYILPGVLAVNTVALLALDQLGGIPQWIKTATALFLAF*
Ga0079216_100446392	3300006918	Agricultural Soil	MNNIAQTRILRLRSGQATRLESALSASYILPGVLAVNTVALLALDQLGGIPQWIKTAAALFLAF*
Ga0079216_109604772	3300006918	Agricultural Soil	MNNVAQTRTTKLEAALSANYVLPAMLATNTVALVALDRLGGIPQWVKSAVALFLAF*
Ga0079218_104040042	3300007004	Agricultural Soil	MNNVAQTRTTRLENVLSASYVLPSMLALNTVALLALDQLGGIPSWVKTAAALFLAF*
Ga0079218_119283802	3300007004	Agricultural Soil	MNNIAQTRILRLRSGQATRLESALSTTYVLPAMLAVNTVALLALDQIGGIPQWVKTAAALFLAF*
Ga0079218_136069652	3300007004	Agricultural Soil	MNNIAQTRILRLRSGQATRLESALSATYALPGVLAANTVALLALDRLGGIPEWIKTAAALFLAF*
Ga0075418_101348452	3300009100	Populus Rhizosphere	MNNIAQTRILRPRSGQAAATKLESAFSTAYVLPGMLAVNTVALLALDQLGGIPEWIKTVASLFLSF*
Ga0075418_106689532	3300009100	Populus Rhizosphere	MNNVAQTRISKFESALPATYVLPGLLAVNTVALLALDRLGGIPEWIRSAAALFLSF*
Ga0114129_107639314	3300009147	Populus Rhizosphere	MNNFAQTRTTRLESALSATYVLPSVLAVNTFALLALDRLGGIPEWIKTAAALFLAF*
Ga0114129_129613061	3300009147	Populus Rhizosphere	MNNFADTRTTKLESAVWTNYLLPGILAANTFVLLALDQLGQIPNWIKTAAALFLSF*
Ga0111538_116696993	3300009156	Populus Rhizosphere	MNNIAQTNTTRLESALSATYVLPGLLALNTVALLALDRLGGIPDWVKAAAALFLSF*
Ga0105242_100041765	3300009176	Miscanthus Rhizosphere	MTNFAQTRTTKFESALSATYVLPGVLAVNTFALLALDSLGGIPEWIKTAAALFLAF*
Ga0126307_110937491	3300009789	Serpentine Soil	MNNIAHTRTTARLEGVLSAGYILPGVLAVNTVALLAMDRLGAIPQWLKTVAALFLSF*
Ga0126309_103956282	3300010039	Serpentine Soil	MNNVAQTRTTRLESVLSASTILSSMLALNTVALLALDQLGGIPAWVKTVAALFLSF*
Ga0126310_100107616	3300010044	Serpentine Soil	MNNFAQTRATKFESALSATYALPAVLAVNTVALLALDRLGGIPEWIRTAAALFLSF*
Ga0126310_101003521	3300010044	Serpentine Soil	NFADTRTTKLESVLSAGYLLPTILAANTFALLALDQMGGIPNWIKTAAALFLSF*
Ga0126310_103603971	3300010044	Serpentine Soil	MNNFAQTRTSKLESALSVSYLLPTMLAVNTCALLALEQLGGIPDWVKTAAAIFLSF*
Ga0126310_113133261	3300010044	Serpentine Soil	MNNVAQTRILRPRSATRLESVLSAQYVLPSMLALNTVALFALDSLGGIPAWVKTAAALFLAF*
Ga0126311_103777142	3300010045	Serpentine Soil	MNNVAQTRILRPRSGQATRLEAVLSASYALPSMLALNTVALLALDHLGGIPQWVKTAAALFLSF*
Ga0126311_118231171	3300010045	Serpentine Soil	MNNIAQTRNRAAHGTTRLESVLSANYVLPAVLAVNTLALVALDHLGGIPQWIKTAAALFLSF*
Ga0134127_124527492	3300010399	Terrestrial Soil	MKSFVQTTTTKFEAVLSANYVLPGVLAVNTVALLALDRLGGIPEWIRTAA
Ga0134127_127676382	3300010399	Terrestrial Soil	MNNIAQTRTTRLESALSATYVLPGLLAANTVALLALDRLGGIPEWIKAAAALFLAF*
Ga0134123_1000036514	3300010403	Terrestrial Soil	MNNIAQTRTTRFEVALSSTYVLPGLLAVNTVALLALDRLGGVPEWIRTAAALFLSF*
Ga0134123_102631992	3300010403	Terrestrial Soil	MTNIAQTRSTRLETVLSAHFALPAILTVNTVALFALDQLGGIPTWIKTAAALFLSF*
Ga0134123_115573251	3300010403	Terrestrial Soil	MKSFVQTTTTKFEAVLSANYVLPGVLAVNTVALLALDRLGGIPEWIRTAAALFLSF*
Ga0137325_10422312	3300011415	Soil	MNNIAQTRTTRLETALSASYVLPSMLALNTVALLALDQLGGIPQWVKTAAALFLSF*
Ga0137448_10186921	3300011427	Soil	MNNVASTRILRLRSGQATRLESVLSAGYILPSMLALNTVALLALDHLGGIPSWVKTAAA
Ga0137431_11833932	3300012038	Soil	NNIAQTRTTRLETALSASYVLPSMLALNTVALLALDQLGGIPQWVKTAAALFLSF*
Ga0137461_10175994	3300012040	Soil	MNNIAQTRTTRLESVLSASTILPSMLALNTVALLALDQLGGIPAWVKTAAALFLSF*
Ga0137461_10355482	3300012040	Soil	MNNVASTRILRLRSGQATRLESVHSAGYILPSMLALNTVALLALDHLGGIPSWVKTAAALFLAF*
Ga0150984_1232911222	3300012469	Avena Fatua Rhizosphere	MMNNVAQTRTTRLEAVFSAAYVLPSLLAVNTVALFALDQLGGIPSWIKTAAALFLQF*
Ga0157216_102041612	3300012668	Glacier Forefield Soil	MNNIAQTRTTRLESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKSAAALFLAF*
Ga0157303_101358162	3300012896	Soil	MNNVAQTRTRLESALSASYILPAMLALNTVALLALDQIGGIPQWVKAAAALFLAF*
Ga0157378_109313071	3300013297	Miscanthus Rhizosphere	MRGGPINNFADTRSSKLESALSANYVLPAILATNTFVLLALDQLGQIPTWVKTAAALFLSF*
Ga0163162_104144032	3300013306	Switchgrass Rhizosphere	MNNNYAQTRTTRFESALSANYVLPAVLAVNTFALLALDRLGGIPQWIKTAAALFLSF*
Ga0157380_108563482	3300014326	Switchgrass Rhizosphere	MGDTMNNIAQTRSTRIESALSATYVLPALLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0182000_100307261	3300014487	Soil	MNNIAQTRTKLESTFSAAYVLPAMLAVNTVALLALDQLGGIPSWLKTITALFLSF*
Ga0180074_10074522	3300014877	Soil	MNNVAQTRILRPRSGQATRLESVLSASYVLPSMLALNTVALLALDQLGGIPQWVKTAAALFLSF*
Ga0190266_105429201	3300017965	Soil	TMNNIAQTRTTRLESALSATYALPAMLAVNTVALLALDQIGGIPQWIKAAAALFLAF
Ga0190265_101389461	3300018422	Soil	MNNVAQTRILRLRSGQATRLESALSTTYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0190272_1000004658	3300018429	Soil	MNNVAQTRTTRLENVLSASYVLPSMLALNTVALLALDQLGGIPSWVKTAAALFLAF
Ga0190275_100170514	3300018432	Soil	MNNVAQTRTTTKLESALSASYILPAMLGLNTVALLALDQLGGIPQWVKASAALFLAF
Ga0190275_111198032	3300018432	Soil	MNNIARTTRIESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0190275_115977512	3300018432	Soil	MNNVAQTRTTKLEAALSANYVLPAMLATNTVALVALDRLGGIPQWVKTAVALFLAF
Ga0190269_100206164	3300018465	Soil	MNNVAQTRTRKLEAALSAQYVLPAMLATNTLALVALDQLGGIPQWVKSAVALFLAF
Ga0190269_108047212	3300018465	Soil	MNNVAQTRTTRLEGAVSAAYVLPSLLAVNTFALLALEQAGGIPAWVKTAVALFLAF
Ga0190269_111891492	3300018465	Soil	MNNVAQTRTTKLESLSAAYVLPAMLAVNTVALVALDQLGGIPQWVKTAAALFLSF
Ga0190268_116948331	3300018466	Soil	MNNVAQTRTTRLESVLSANLILPSMLALNTVALVALDQLGGIPQWVKTAAALFLSF
Ga0190270_1000001982	3300018469	Soil	MNNVAQTRTTKLEAALSANYVLPAMLATNTLALVALDRLGGIPQWVKTAVALFLAF
Ga0190270_105400521	3300018469	Soil	MNNIAQTRTTRYELTLSGTYVLPGLLAVNTVALLALDRLGGIPEWIRTAAALFLSF
Ga0190270_106307362	3300018469	Soil	MNNVAQTRTTRLESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0190270_124900861	3300018469	Soil	MNNIAQTRTTRYEVALSSSYVLPGLLAVNTVALLALDRLGGVPEWIRTAAALFLSF
Ga0190274_107439693	3300018476	Soil	MNNIAQTRILQLRSGQATRLESTLSATYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0193609_10495892	3300018906	Soil	MNNVARTTKIESVLSANYALPAVLTVNTVALLALDQLGGIPTWIKTAAALFLAF
Ga0190264_105466243	3300019377	Soil	RTTRLENVLSASYVLPSMLALNTVALLALDQLGGIPSWVKTAAALFLAF
Ga0190267_105216212	3300019767	Soil	MNNVAQTRTTRLESVLSAQYVLPSMLALNTVALFALDRLGGIPAWVKTAAALFLAF
Ga0196977_100011918	3300020146	Soil	MNNIAQTRTTRIESVLSTSYILPGMLAVNTVALLALDQVGGIPQWVKTVAALFLAF
Ga0196976_10001558	3300020147	Soil	MNNVAQTRTTRLESVLSTQYVLPSMLALNTVALFALDRLGGIPSWVKTAAALFLAF
Ga0196964_100233801	3300020202	Soil	MNNVAQTRNREAIGTTRLESVLSAQYVLPSMLALNTVALFALDRLGGIPAWVKTAAALFLAF
Ga0196963_102246562	3300020215	Soil	MNNVAQTRSLQLRSGLATRLESVLSASYVLPSMLALNTLALLALDRLGGIPQWVKTAAALFLAF
Ga0213899_1047042	3300021272	Soil	MNNIAQTRTTRLETALSASYVLPSMLALNTVALLALDQLGGIPQWVKTAAALFLSF
Ga0213903_1007923	3300021289	Soil	MNNIAQTRTTRIESALSTAYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0213902_1031372	3300021290	Soil	MNNFAQTRTSKLESALSVSYLLPTMLAVNTCALLALEQLGGIPDWVKTAAAIFLSF
Ga0193706_10021766	3300021339	Soil	MNQIAQTRNTKLESALSATYVLPGMLALNTVALLALDYLGGIPQWVKTVAALFLAF
Ga0213873_10000003391	3300021358	Rhizosphere	MNNAAQTRTNKLETAVSAAYALPAMLAANTVALLALDQLGGIPHWIKTAVSLFLSF
Ga0213876_100490113	3300021384	Plant Roots	MNNFADTRTTKLESALSANYLLPALLAANTFALLALDQMGSIPGWLKTAAALFLAF
Ga0213876_100609133	3300021384	Plant Roots	MNNVAETRSSKLVSAATLPYVLPTILAVNTFTLVAIDRLGGIPNWIKSAVALFLSF
Ga0193698_10053504	3300021968	Soil	MNNIAQTRTTRIESALSATYVLPAMLAVNTVALLALDQIGGIPQWLKAAAALFLAF
Ga0222622_105438923	3300022756	Groundwater Sediment	RTTRLESALSATYVLPAMLAVNTVALLALDQIGGIPQWLKAAAALFLAF
Ga0222622_114106751	3300022756	Groundwater Sediment	MNNIARTTTKLESTFSTAYVLPGMLAVNTVALLALDQLGGVPSWLKTITALFLAF
Ga0209640_104408981	3300025324	Soil	TRILRLRSGQATRLESVLSAGYILPSMLALNTVALLALDRLGGIPSWVKTAAALFLAF
Ga0207655_10307254	3300025728	Miscanthus Rhizosphere	MNNFAQTRTTRLESALSAAYVLPGVLAVNTVALLALDRLGGIPEWIRTAAALFLSF
Ga0207645_108411622	3300025907	Miscanthus Rhizosphere	MNNFADTRSSKLESALSANYVLPAILATNTFVLLALDQLGQIPNWVKTAAALFLSF
Ga0207643_101116873	3300025908	Miscanthus Rhizosphere	MKSFAQTTTTKFEAVLSANYVLPGVLAVNTVALLALDRLGGIPEWIRTAAALFLSF
Ga0207660_100595474	3300025917	Corn Rhizosphere	MNNNYAQTRTTRFESALSANYVLPAVLAVNTFALLALDRLGGIPQWIKTAAALFLSF
Ga0207662_100099743	3300025918	Switchgrass Rhizosphere	MNNIAQTRTTRIESALSATYVLPAVLAVNTVALLALNALGGIPVWIKSAAALFLAF
Ga0207686_100490944	3300025934	Miscanthus Rhizosphere	MTNFAQTRTTKFESALSATYVLPGVLAVNTFALLALDSLGGIPEWIKTAAALFLAF
Ga0207670_113226061	3300025936	Switchgrass Rhizosphere	MNNFARTATTKLESALSANYVLPAVLAVNTVALLALDRLGGIPEWIRTAAALFLS
Ga0207708_1000001044	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNNIAQTRTTRYEVALSSTYVLPGLLAVNTVALLALDRLGGVPEWIRTAAALFLSF
Ga0209468_100001155	3300026306	Soil	MNNFAQTRISKLESAIPAGYVLPALLAVNTVALLALDSLGGIPEWIRSAAALFLSF
Ga0214467_10118032	3300027075	Soil	MNNVAQTTRSTRLETALSASYMLPGVLALNTVTLLALDRLDAIPQWVKAAAALFLAF
Ga0209731_10583141	3300027326	Forest Soil	MNNIAQTRTTRLESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKSAAALFLAF
Ga0209387_11091082	3300027639	Agricultural Soil	MNNIAQTRILRLRSGQATRLESALSASYILPGVLAVNTVALLALDQLGGIPQWIKTAAALFLAF
Ga0209347_10058363	3300027640	Deep Subsurface	MNNIAQTRSTRFESILSATYLLPGMLAVNTAALMALNHLGGIPQWVKAAAALFLAF
Ga0209462_100408383	3300027761	Agave	AIMNNVASTRTTRLESVLSASYILPSMLALNTVALLALDRLGGIPSWIKTAAALFLAF
Ga0209462_100628601	3300027761	Agave	MNNVAQTRTTRIESVLSTSYILPGMLAVNTVALLALDQIGGIPQWVKTVAALFLAF
Ga0209486_103066662	3300027886	Agricultural Soil	MNNIAQTRILRLRSGQATRLESALSTTYVLPAMLAVNTVALLALDQIGGIPQWVKTAAALFLAF
Ga0209486_110982082	3300027886	Agricultural Soil	MNNIAQTRILRLRSGQATRLESALSATYALPGVLAANTVALLALDRLGGIPEWIKTAAALFLAF
Ga0207428_10000007324	3300027907	Populus Rhizosphere	MNNIAQTRTTRIESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0209382_1000009844	3300027909	Populus Rhizosphere	MNNIAQTRTTRLETVLSASYILPSMLALNTVALLALDQLGGIPQWVKTAAALFLGF
Ga0209382_103023584	3300027909	Populus Rhizosphere	MNNIAQTRILRPRSGQAAATKLESAFSTAYVLPGMLAVNTVALLALDQLGGIPNWIKTAASLFLAF
Ga0307318_103623562	3300028744	Soil	VAQTRTTKLETALSATYVLPAMLATNTLALVALDHLGGIPQWVKTAVALFLAF
Ga0307320_101640261	3300028771	Soil	MNNVAQTRTTKLETALSATYVLPAMLATNTLALVALDHLGGIPQWV
Ga0268258_100685592	3300030502	Agave	MNNVAQTRTTRIESVLSTSYILPGMLAVNTVALLALDQIGGIPQWVKTVAALFL
Ga0268243_10803111	3300030510	Soil	MNNIAQTRTKLESTFSAAYVLPAMLAVNTVALLALDQLGGIPSWLKTITALFLSF
Ga0307502_100424871	3300031164	Soil	MNNVAQTRTTRLENVLSTSYVLPSMLALNTVALLALNQLGGIPAWVKTAAALFLAF
Ga0307502_100885532	3300031164	Soil	MNNIAQTRTTRLESALSANYMLPAMLAVNTVALLALDQVGGIPQWVKSAVALFLAI
Ga0307502_101349971	3300031164	Soil	MNNIAQTRILRLRSGQATRLESALSATYVLPAMLAVNTVALLALDQIGGIPQWVKAAAALFLAF
Ga0307505_1000115311	3300031455	Soil	MNNVAQTRTTRLESVLSASTVLPSMLALNTVALLALDQLGGIPAWVKTAAALFLSF
Ga0307408_1015741662	3300031548	Rhizosphere	MNNIAQTRTTRLEAALSASYLLPGVLAVNTVALLALDRLGGIPQWIKTAAGIFLGF
Ga0334942_000157_32390_32560	3300034008	Biocrust	MNNVAQTRSTRLENVLSTSYILPSMLALNTVALLALDQLGGIPAWVKTAAALFLAF
Ga0334940_081416_2_160	3300034025	Biocrust	MNNVAQTRTTRLESVLSAQYVLPSMLALNTVALFALDRLGGIPAWVKTAAVLF
Ga0334949_002200_1276_1446	3300034027	Biocrust	MNNVAQTRTNKLEAALSANYVLPAMLATNTLALVAVDRLGGIPQWVKTAVALFLAF
Ga0334956_000666_8822_8995	3300034139	Biocrust	MNDLAQTRTTTKLESLLSANYLLPTMLAVNTCALVALDRVGGIPDWVKTAAALFLAF
Ga0334963_000095_51958_52128	3300034145	Sub-Biocrust Soil	MNNVAQTRTTKLESALSANYVLPAMLATNTLALVALDRLGGIPQWVKTAVALFLAF
Ga0334964_000050_56597_56767	3300034146	Sub-Biocrust Soil	MNNMAQTRTSRLETALSANFALPGVLAVNTVALLALDHLGGIPSWIKTAAALFLAF
Ga0334964_007705_769_939	3300034146	Sub-Biocrust Soil	MNNVAQTRTTRLESVLSAQYVLPSMLALNTVALFALDRVGGIPAWVKAAAALFLAF
Ga0334925_000047_12646_12819	3300034173	Hypolithic Biocrust	MMNNLAQTRTNKLEAAFNTAYVLPAVLAVNTAALVALEQLGGIPTWIKTAVALFLSF
Ga0334937_139346_131_301	3300034221	Biocrust	MNNAAQTRTTKLENVLSAQYVLPAMLATNTLALVALERLGGIPQWVKSAVALFLAF
Ga0334948_009929_815_985	3300034760	Sub-Biocrust Soil	MNNVAQTRTTRLESVLSAQYVLPSMLALNTVALFALDRLGGIPAWVKTAAVLFLSF
Ga0334935_000459_917_1087	3300034781	Biocrust	MNNVAQTRTTKLETVLSANYVLPAMLATNTLALVALDRVGGIPQWVKSAVALFLAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043603

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences