Metagenome / Metatranscriptome Family F041479

Basic Information
Family ID	F041479
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	51 residues
Representative Sequence	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSL
Number of Associated Samples	143
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.25 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	91.88 %
Associated GOLD sequencing projects	140
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Bacteria (93.750 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.875 % of family members)
Environment Ontology (ENVO)	Unclassified (20.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.75% β-sheet: 0.00% Coil/Unstructured: 76.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF08388	GIIM	16.88
PF00078	RVT_1	11.88
PF13545	HTH_Crp_2	0.62
PF00106	adh_short	0.62
PF01695	IstB_IS21	0.62
PF00135	COesterase	0.62
PF00665	rve	0.62
PF04299	FMN_bind_2	0.62
PF13333	rve_2	0.62
PF01527	HTH_Tnp_1	0.62
PF13683	rve_3	0.62
PF02798	GST_N	0.62
PF03050	DDE_Tnp_IS66	0.62
PF00069	Pkinase	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.50
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.62
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.62
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.62
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.62
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.62
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.62
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.75 %
Unclassified	root	N/A	6.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.75 %
Unclassified	root	N/A	6.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.75 %
Unclassified	root	N/A	6.25 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.62 %
Unclassified	root	N/A	6.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.38 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8.12 %
Unclassified	root	N/A	6.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	35.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.50 %
Unclassified	root	N/A	6.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	22.50 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	7.50 %
Unclassified	root	N/A	6.25 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.88 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.62 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	22.50 %
Unclassified	root	N/A	6.25 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.88 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.88 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	1.25 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.62 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	11.88 %
Unclassified	root	N/A	6.25 %
Paraburkholderia humisilvae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	1.88 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.88 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.88 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1.25 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	1.25 %
unclassified Methylosinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus	0.62 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.62 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.62 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	11.88 %
Unclassified	root	N/A	6.25 %
Paraburkholderia humisilvae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	1.88 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.88 %
Cupriavidus sp. UYPR2.512	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYPR2.512	1.25 %
Rhizobium mongolense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense	1.25 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1.25 %
Methylosinus sp. C49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	0.62 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	0.62 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.62 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	11.88 %
Unclassified	root	N/A	6.25 %
Paraburkholderia humisilvae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	1.88 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.88 %
Rhizobium mongolense USDA 1844	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense → Rhizobium mongolense USDA 1844	1.25 %
Cupriavidus sp. UYPR2.512	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYPR2.512	1.25 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1.25 %
Archangium violaceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum	0.62 %
Methylosinus sp. C49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	0.62 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.62 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig28486	Not Available	548	Open in IMG/M
2170459002\|FZY7DQ102FVZU3	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300001143\|JGI12687J13287_102459	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300001162\|JGI12714J13572_1006508	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300001416\|JGI20176J14865_100025	All Organisms → cellular organisms → Bacteria	2893	Open in IMG/M
3300001546\|JGI12659J15293_10019072	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300003163\|Ga0006759J45824_1067348	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300003223\|JGI26343J46809_1000269	All Organisms → cellular organisms → Bacteria → Proteobacteria	2648	Open in IMG/M
3300003505\|JGIcombinedJ51221_10145207	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300004608\|Ga0068924_1006436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1186	Open in IMG/M
3300004785\|Ga0058858_1328655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005161\|Ga0066807_1002602	All Organisms → cellular organisms → Bacteria → Proteobacteria	1416	Open in IMG/M
3300005176\|Ga0066679_10386360	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005334\|Ga0068869_100835520	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005536\|Ga0070697_101665607	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005556\|Ga0066707_10193583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300005764\|Ga0066903_104213505	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005764\|Ga0066903_107923236	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005993\|Ga0080027_10021808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	2279	Open in IMG/M
3300006059\|Ga0075017_100631698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. C49	820	Open in IMG/M
3300006163\|Ga0070715_10027754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2264	Open in IMG/M
3300006173\|Ga0070716_101047692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	647	Open in IMG/M
3300009174\|Ga0105241_11726185	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300009524\|Ga0116225_1060600	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300009764\|Ga0116134_1277188	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010154\|Ga0127503_10994235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	515	Open in IMG/M
3300010360\|Ga0126372_10648487	Not Available	1022	Open in IMG/M
3300010877\|Ga0126356_10078134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	816	Open in IMG/M
3300011043\|Ga0138528_155835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	755	Open in IMG/M
3300011120\|Ga0150983_16560112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	839	Open in IMG/M
3300012204\|Ga0137374_10607084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	833	Open in IMG/M
3300012211\|Ga0137377_11291477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	660	Open in IMG/M
3300012360\|Ga0137375_10776245	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012361\|Ga0137360_10069938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2596	Open in IMG/M
3300012361\|Ga0137360_11539408	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012917\|Ga0137395_10224370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1314	Open in IMG/M
3300012957\|Ga0164303_10146605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1243	Open in IMG/M
3300012958\|Ga0164299_10873932	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012960\|Ga0164301_11301836	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012985\|Ga0164308_12190841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	515	Open in IMG/M
3300012989\|Ga0164305_11214883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	654	Open in IMG/M
3300015052\|Ga0137411_1027032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYPR2.512	521	Open in IMG/M
3300015052\|Ga0137411_1127493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3423	Open in IMG/M
3300015052\|Ga0137411_1127497	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300015053\|Ga0137405_1099595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYPR2.512	997	Open in IMG/M
3300015053\|Ga0137405_1382121	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300015054\|Ga0137420_1315726	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300015054\|Ga0137420_1377858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	905	Open in IMG/M
3300016294\|Ga0182041_10188348	Not Available	1632	Open in IMG/M
3300016294\|Ga0182041_11277771	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300016404\|Ga0182037_10140701	Not Available	1804	Open in IMG/M
3300016730\|Ga0181515_1046085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	771	Open in IMG/M
3300017948\|Ga0187847_10741410	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300017974\|Ga0187777_11135662	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300018020\|Ga0187861_10358195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	616	Open in IMG/M
3300018054\|Ga0184621_10355403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	515	Open in IMG/M
3300018481\|Ga0190271_12856294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	580	Open in IMG/M
3300019165\|Ga0184589_110928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	674	Open in IMG/M
3300019250\|Ga0187790_1035804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	663	Open in IMG/M
3300019254\|Ga0184641_1356026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300019284\|Ga0187797_1392484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	687	Open in IMG/M
3300019789\|Ga0137408_1197647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	972	Open in IMG/M
3300019877\|Ga0193722_1108026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	657	Open in IMG/M
3300020022\|Ga0193733_1194995	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300020199\|Ga0179592_10042701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2057	Open in IMG/M
3300020199\|Ga0179592_10353559	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300020581\|Ga0210399_10236616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1521	Open in IMG/M
3300021086\|Ga0179596_10189772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	996	Open in IMG/M
3300021088\|Ga0210404_10524110	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300021178\|Ga0210408_10453546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1020	Open in IMG/M
3300021361\|Ga0213872_10067153	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300021401\|Ga0210393_10140443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1938	Open in IMG/M
3300021404\|Ga0210389_10760922	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300021432\|Ga0210384_10181812	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300021441\|Ga0213871_10030165	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300021475\|Ga0210392_10154966	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300021968\|Ga0193698_1005332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1582	Open in IMG/M
3300022726\|Ga0242654_10372811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	542	Open in IMG/M
3300024330\|Ga0137417_1118809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	574	Open in IMG/M
3300025457\|Ga0208850_1009420	All Organisms → cellular organisms → Bacteria → Proteobacteria	1890	Open in IMG/M
3300025527\|Ga0208714_1034713	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300025914\|Ga0207671_10871290	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300025927\|Ga0207687_10845553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	782	Open in IMG/M
3300025929\|Ga0207664_10757557	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300025939\|Ga0207665_10440040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	999	Open in IMG/M
3300026216\|Ga0209903_1032974	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300026301\|Ga0209238_1242522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	535	Open in IMG/M
3300026317\|Ga0209154_1248747	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300026319\|Ga0209647_1161336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	915	Open in IMG/M
3300026322\|Ga0209687_1037051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1586	Open in IMG/M
3300026326\|Ga0209801_1246231	Not Available	682	Open in IMG/M
3300026481\|Ga0257155_1027328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	840	Open in IMG/M
3300026481\|Ga0257155_1033978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	767	Open in IMG/M
3300026481\|Ga0257155_1043383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense → Rhizobium mongolense USDA 1844	692	Open in IMG/M
3300026490\|Ga0257153_1065139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	737	Open in IMG/M
3300026497\|Ga0257164_1072033	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300026529\|Ga0209806_1340351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	503	Open in IMG/M
3300026551\|Ga0209648_10033849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4452	Open in IMG/M
3300026551\|Ga0209648_10070585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2939	Open in IMG/M
3300027625\|Ga0208044_1129448	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300027783\|Ga0209448_10073365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium violaceum	1149	Open in IMG/M
3300027829\|Ga0209773_10404747	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300027842\|Ga0209580_10384602	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027855\|Ga0209693_10524069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	565	Open in IMG/M
3300027903\|Ga0209488_10088039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2317	Open in IMG/M
3300028380\|Ga0268265_11167709	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300028673\|Ga0257175_1011146	All Organisms → cellular organisms → Bacteria → Proteobacteria	1365	Open in IMG/M
3300028673\|Ga0257175_1025873	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300028710\|Ga0307322_10049966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	1019	Open in IMG/M
3300028807\|Ga0307305_10277215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	764	Open in IMG/M
3300028828\|Ga0307312_10094756	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300028881\|Ga0307277_10120495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124	Open in IMG/M
3300029923\|Ga0311347_10283047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	1014	Open in IMG/M
3300029955\|Ga0311342_10206294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1892	Open in IMG/M
3300030114\|Ga0311333_10448065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1051	Open in IMG/M
3300030294\|Ga0311349_11394924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	651	Open in IMG/M
3300030706\|Ga0310039_10041539	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300030855\|Ga0075374_10050130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	634	Open in IMG/M
3300030935\|Ga0075401_10004624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	584	Open in IMG/M
3300030969\|Ga0075394_10013197	Not Available	509	Open in IMG/M
3300030969\|Ga0075394_10063086	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300030975\|Ga0099845_1542748	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031018\|Ga0265773_1019917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	653	Open in IMG/M
3300031091\|Ga0308201_10088430	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300031091\|Ga0308201_10327984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	554	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1134983	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031520\|Ga0272428_1168623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300031543\|Ga0318516_10608472	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031640\|Ga0318555_10437001	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031680\|Ga0318574_10467093	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300031719\|Ga0306917_11455864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	527	Open in IMG/M
3300031719\|Ga0306917_11564071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	506	Open in IMG/M
3300031726\|Ga0302321_101148506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	888	Open in IMG/M
3300031736\|Ga0318501_10381273	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031747\|Ga0318502_10878215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	545	Open in IMG/M
3300031753\|Ga0307477_10117651	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300031753\|Ga0307477_10261357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1198	Open in IMG/M
3300031754\|Ga0307475_11347222	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031770\|Ga0318521_10907454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	538	Open in IMG/M
3300031793\|Ga0318548_10072735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense → Rhizobium mongolense USDA 1844	1610	Open in IMG/M
3300031797\|Ga0318550_10424297	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300031823\|Ga0307478_10498704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1014	Open in IMG/M
3300031847\|Ga0310907_10719562	Not Available	553	Open in IMG/M
3300031910\|Ga0306923_10734593	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031945\|Ga0310913_10726997	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031954\|Ga0306926_10085529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3844	Open in IMG/M
3300031959\|Ga0318530_10452264	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300032043\|Ga0318556_10158933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300032059\|Ga0318533_11088767	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300032060\|Ga0318505_10282909	Not Available	782	Open in IMG/M
3300032068\|Ga0318553_10467659	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300032076\|Ga0306924_12481370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	520	Open in IMG/M
3300032076\|Ga0306924_12630143	Not Available	501	Open in IMG/M
3300032121\|Ga0316040_106931	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300032756\|Ga0315742_13295198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	521	Open in IMG/M
3300032805\|Ga0335078_12688438	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300033289\|Ga0310914_10037469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3920	Open in IMG/M
3300033290\|Ga0318519_10163317	Not Available	1252	Open in IMG/M
3300033818\|Ga0334804_056131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1122	Open in IMG/M
3300034674\|Ga0314799_040759	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.38%
Host-Associated	Host-Associated	5.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Aquatic	Environmental → Aquatic	6.88%
Plants	Host-Associated → Plants	5.00%
Human	Host-Associated → Human	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.12%
Freshwater	Environmental → Aquatic → Freshwater	5.62%
Peat	Environmental → Terrestrial → Peat	3.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.75%
Sediment	Environmental → Aquatic → Sediment	1.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.25%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.62%
Digestive System	Host-Associated → Human → Digestive System	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.62%
Loam	Environmental → Terrestrial → Soil → Loam	8.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Sand	Environmental → Terrestrial → Soil → Sand	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.62%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.25%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.62%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.88%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.25%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.25%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.62%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.62%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.62%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.62%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.62%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300001143	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1	Environmental	Open in IMG/M
3300001162	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2	Environmental	Open in IMG/M
3300001416	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300003163	Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004608	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011043	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 6 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019250	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026216	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030975	Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032121	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300034674	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041479

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00325780	2166559006	Grass Soil	VSLPPCCRFHPAEAKCRIGQISAPHAAFALRLRARPSVSLIFEAT
E1_04006630	2170459002	Grass Soil	LLSMSLSPCCRFHPAKVSSRVGQISAVHVAFALRLRARPLEVLTFEATTRLLLLRP
JGI12687J13287_1024591	3300001143	Forest Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLQARPSGILIFEATMRS
JGI12714J13572_10065082	3300001162	Forest Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSPLLRP
JGI20176J14865_1000253	3300001416	Arctic Peat Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILTFEATTRSLLLRPGDS*
JGI12659J15293_100190723	3300001546	Forest Soil	LLSMSLSPCCRFHPAEVNSRIGQISAVHVAFALRLQARPSGTFTFEATTR
Ga0006759J45824_10673481	3300003163	Avena Fatua Rhizosphere	LLSMSLSPCCRFHPAKVSSRVGQISAVPVAFALRLQARPLGTLTFEATTRSLLLR
JGI26343J46809_10002692	3300003223	Bog Forest Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS*
JGIcombinedJ51221_101452071	3300003505	Forest Soil	TVLRFHPAEVNIRIGQSSAAHAAFALRLKARPSEILLFEATMRSLLLRPGDS*
Ga0068924_10064361	3300004608	Peatlands Soil	LQLLGMSLSPCCRFHPAEVLGRIDQISAPHAAFALRLGARPSGLLIFEATFAFTVVTAR*
Ga0058858_13286551	3300004785	Host-Associated	QLLGMSLSPCCRFHPAEVNSRIGQYSAAHAAFAPEVGSALGAIFFEATMRSLLIQPGDS*
Ga0066807_10026022	3300005161	Soil	LLSMSLSPCCRFHPAKVSSRVGQISAVHVAFALRLRARPLEVLTFEATTRLLL
Ga0066679_103863601	3300005176	Soil	LQLLSMSLSPCCRFHPAEVNSRIGQFSARSFCLRPTVAGSTLGELIFEATMRSLLLRPGDS*
Ga0068869_1008355201	3300005334	Miscanthus Rhizosphere	LLSMSLSPCCRFHPAKVSSRVGQISAVHVAFALRLQARPSGTLTFEATTRSLLLRPGDS
Ga0070697_1016656072	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRMRARPSGIFIFEATMRSLLLRPG
Ga0066707_101935833	3300005556	Soil	LLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGI
Ga0066903_1042135051	3300005764	Tropical Forest Soil	LLGMSLPPCCRFHPAEMRCRVGQFSASHAAFALQLQARPSDPLIFEATCAFTFV
Ga0066903_1079232361	3300005764	Tropical Forest Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGI
Ga0080027_100218084	3300005993	Prmafrost Soil	PAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS*
Ga0075017_1006316981	3300006059	Watersheds	FHPAEVNSRIGQFSAGHSAFALRMQAQPSGIFTFEATTRSLLLRPGDS*
Ga0070715_100277544	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LLQLLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALQLKARPSGILIFEATTRSPLLRPGDS*
Ga0070716_1010476922	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LLSMSLSPCCRFHPAEVASRIGQSSAAHAAFALRLKARPSGILIFEATTRL
Ga0105241_117261851	3300009174	Corn Rhizosphere	LLGMSLSPCCRFPPAEVNIRIVQSSAAHAAFALQLKARPSGIL
Ga0116225_10606001	3300009524	Peatlands Soil	LLSMSLSPCCRFHPAKVNNRVSQSSVVHAAFAFQLEARPLVAFTFEATMRS
Ga0116134_12771882	3300009764	Peatland	LLSMSLSPCCRFHPAEVNSRIGQCSASHSAFAPTLKARPSGIHIFEATMRSLLLRPGDRVDGGRNPRLS
Ga0127503_109942351	3300010154	Soil	LSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS*
Ga0126372_106484871	3300010360	Tropical Forest Soil	AEVISRIGQCSAAHAAFALGMQARPSGLLTFEATMRSLLIQPGDS*
Ga0126356_100781341	3300010877	Boreal Forest Soil	LLGMSLSPCCRFHPAKVSSRVGQISAVHVAFAPTLRARPLEILTFEAT
Ga0138528_1558351	3300011043	Peatlands Soil	LLGMSWSPCCRFHPAEVTSRIGQYSASHSAFAPTLKARPS
Ga0150983_165601121	3300011120	Forest Soil	GQFSAGHSAFALRMRARPSGIFIFEATMRSLLLRPGDS*
Ga0137374_106070841	3300012204	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSL
Ga0137377_112914771	3300012211	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLK
Ga0137375_107762451	3300012360	Vadose Zone Soil	LLSLSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSL
Ga0137360_100699381	3300012361	Vadose Zone Soil	TIRIGQSSASHAAFALGLKARPSEILIFEATMRSLLLRPGDS*
Ga0137360_115394081	3300012361	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNSRIGQFSASHSAFALRLRARPSGIFIFEATTRSLLLRP
Ga0137395_102243701	3300012917	Vadose Zone Soil	PANVNIRIGQSSTAHAAIALRLKARPSGILIFEATIRSLLLRPGDS*
Ga0164303_101466052	3300012957	Soil	EVNSRVGQSSAAHAAFALRLKARPSGILIFEAPMRYLLLRPGDS*
Ga0164299_108739322	3300012958	Soil	LLSLSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGIL
Ga0164301_113018362	3300012960	Soil	FRAGTSGLLQLLSMSLSPCCRFHPAEVNSRVGQISAAHAAFALWLQARPSGILLFEATMRSLLLRPSDS*
Ga0164308_121908411	3300012985	Soil	AEVNIRIGQSSAAHAAFALQLKARPSGTLIFEATTRSPLLRPGDS*
Ga0164305_112148831	3300012989	Soil	LLGMSLPTCRRFHPAEVSRRVGQISAIHAAFVLRLQTQPSDFFT
Ga0137411_10270321	3300015052	Vadose Zone Soil	CRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS*
Ga0137411_11274934	3300015052	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARSSGILIF
Ga0137411_11274971	3300015052	Vadose Zone Soil	SPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSEILIFEATMRSLLLRPA*
Ga0137405_10995951	3300015053	Vadose Zone Soil	DFAPGRGGLLQLLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS*
Ga0137405_13821212	3300015053	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSRLLRPGD
Ga0137420_13157262	3300015054	Vadose Zone Soil	EVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS*
Ga0137420_13778581	3300015054	Vadose Zone Soil	EVNIRIGQSSAAQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS*
Ga0182041_101883484	3300016294	Soil	AEVNSRIGQFSAGHSAFALRLQARPSGKLIFEATTRSLLLRPGDS
Ga0182041_112777711	3300016294	Soil	LLSMSLSPCCRFHPAEVISRVGQISAVHVAFALRLQARPSGILTFEATTRSLLLRPGDSWPPL
Ga0182037_101407011	3300016404	Soil	LLSMSLSPCYRFHPAEVNSRIGQFSAGHSAFALRLQARPSG
Ga0181515_10460851	3300016730	Peatland	LLSMSLSPCCRFHPAEVNSRIGQCSASHSAFAPTLKARPSGIHIFE
Ga0187847_107414101	3300017948	Peatland	LLGMSLSPCCRFHPAEVNNRVGQSSAVHAAFAFQLKARPSGILIFEATMRSLLLRPG
Ga0187777_111356621	3300017974	Tropical Peatland	LLGMSLPPCCRFHPAEVNSRVSQTSTIHAAFALRLKTRPSGLLTFEATSRSLLLRPGDS
Ga0187861_103581952	3300018020	Peatland	FYPAEVNSRISQSSAAHIAFAIPLVARPLEVLTFEATTRLLLLRPGDS
Ga0184621_103554031	3300018054	Groundwater Sediment	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSEILIFEATMRSLLLRPGDS
Ga0190271_128562941	3300018481	Soil	TSRFRRLYGLPCSDDFAPGRGGLLQLLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALQLKARPSEILIFEATMRSLLLRPGDS
Ga0184589_1109281	3300019165	Soil	LLSMSLSPCCRSHPAEVISRVGQISAVHVAFALRLQA
Ga0187790_10358041	3300019250	Peatland	LLSMSLSPCCRFHPAKVNSRIGQCSAAHAAFALRLRARPSGILTFEATTRSLL
Ga0184641_13560261	3300019254	Groundwater Sediment	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKA
Ga0187797_13924843	3300019284	Peatland	LLGMSLSPCCRFHPAEVTSRIGQCSASHSAFAPTLKARP
Ga0137408_11976472	3300019789	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPWGYSFSRP
Ga0193722_11080261	3300019877	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGIMHAHVG
Ga0193733_11949951	3300020022	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDSWPPLG
Ga0179592_100427014	3300020199	Vadose Zone Soil	LLQLLSMSLSPCCRFHPAEVNIRIGQSSAADAAFALRLKARPSGILIFEATMRSLLLRPGDS
Ga0179592_103535592	3300020199	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRMRARPSGIFIFEATMRSLLLRPGDSYPLLE
Ga0210399_102366161	3300020581	Soil	AEVNIRIGQSSAAHAAFALRLKARPSEILLFEATMRSLLLRPGDS
Ga0179596_101897722	3300021086	Vadose Zone Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILI
Ga0210404_105241103	3300021088	Soil	LLSMSLSPCCRFHPAEVANRVGQCSVGHIAFALAWEARPSG
Ga0210408_104535461	3300021178	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFI
Ga0213872_100671531	3300021361	Rhizosphere	RFHPAEVNSRISQSSAGHAAFAPTLEARPSEIRIFEATMRLLLLRPGDS
Ga0210393_101404431	3300021401	Soil	LLSMSLSPCCRFHPAEVNSRIGQISAVHVAFALRLQARPSGTFTFEATTRIAV
Ga0210389_107609221	3300021404	Soil	LLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARP
Ga0210384_101818122	3300021432	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRMRARPSGIFI
Ga0213871_100301652	3300021441	Rhizosphere	PAEAGNRVGQISAAHAAFALWLRARPSGMLLFEATMRSPLLRPSDS
Ga0210392_101549662	3300021475	Soil	LLSMSLSPCCRFHPAEVSIRIGQSSVAHAAFALRLKAQPSGILIFEATTRSLLLRPGD
Ga0193698_10053322	3300021968	Soil	LLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALQLKARPSGILIFEATT
Ga0242654_103728112	3300022726	Soil	LLSMSLSPCCRFHPAEVSIRIGQSSVAHAAFALRLKARPSGILIFEATT
Ga0137417_11188091	3300024330	Vadose Zone Soil	LLCMSLSPCCRFHPAEVNIRIGQSSAAHAAIALRLKARPSGILIFEAT
Ga0208850_10094201	3300025457	Arctic Peat Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPS
Ga0208714_10347131	3300025527	Arctic Peat Soil	LLSMSLSPCCRFHPAKVNNRVSQSSVVHAAFAFQLEARPLVTFTFEATMRSLLLRPGDS
Ga0207671_108712901	3300025914	Corn Rhizosphere	LLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATTRSLLLRPG
Ga0207687_108455531	3300025927	Miscanthus Rhizosphere	LLGMSLSPCCHFHPAEVNIRIGQSSIAHAAFALRLKARPSGI
Ga0207664_107575571	3300025929	Agricultural Soil	FHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATTRLPLLRPGDS
Ga0207665_104400402	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRM
Ga0209903_10329742	3300026216	Soil	LLSMSLSPCCRFHPAKVSSRVGQISAVHVAFALRLRARPLEVLTFEATTRLL
Ga0209238_12425221	3300026301	Grasslands Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALQLKARPSGILIFEATMRSLLLRPGD
Ga0209154_12487471	3300026317	Soil	LLGMSLSPCCRFHPAEVISRIGQFSAGHSAFALRLQARPSGILIFEATTR
Ga0209647_11613361	3300026319	Grasslands Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATM
Ga0209687_10370511	3300026322	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMR
Ga0209801_12462311	3300026326	Soil	DFAPGRGGLLQLLSLSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS
Ga0257155_10273282	3300026481	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAIALRLKARPSGILIFEATMRSL
Ga0257155_10339781	3300026481	Soil	RLYGLPCSDDFAPGRGGLLQLLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS
Ga0257155_10433831	3300026481	Soil	LQLLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMRSLLLRPGD
Ga0257153_10651392	3300026490	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEAT
Ga0257164_10720332	3300026497	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFIF
Ga0209806_13403511	3300026529	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEA
Ga0209648_100338491	3300026551	Grasslands Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATTR
Ga0209648_100705851	3300026551	Grasslands Soil	LQLLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSEILIFEATMRSLLLRPGD
Ga0208044_11294482	3300027625	Peatlands Soil	LLSMSLTPCCRFHPAKVNNRVSQSSVVHAAFAFQLEARPLVAFTFEATMRSLLLRPGDS
Ga0209448_100733652	3300027783	Bog Forest Soil	LLGMSLSPCCRFHPAEVNIRIGQSSVAHAAFALRLKARP
Ga0209773_104047472	3300027829	Bog Forest Soil	LLGMSLSPCCRFHPAKVSSRVGQISAVHVAFALRMQARPSGILTFEAT
Ga0209580_103846021	3300027842	Surface Soil	LLGMFLPPCCRFHPAEVSSRIGQISAAHAAFALRMRARPSDPITFEATSAF
Ga0209693_105240691	3300027855	Soil	CSDDFAPGRGGLLQLLSMSSSPCCRFHPAEVNIRIGQISAVHVAFALQLRARPLEVLTFEATTRLLLLRPGDS
Ga0209488_100880391	3300027903	Vadose Zone Soil	LSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMRSLLLRPGDS
Ga0268265_111677092	3300028380	Switchgrass Rhizosphere	LLGMSLSPCCHFHPAEVNIRIGQSSIAHAAFALRL
Ga0257175_10111461	3300028673	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMR
Ga0257175_10258732	3300028673	Soil	CCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRLLLLRPGDS
Ga0307322_100499662	3300028710	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSEILIFEATMRSL
Ga0307305_102772151	3300028807	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHATFALRLKARPSGILIFEATMRSLLL
Ga0307312_100947562	3300028828	Soil	LLSMSLSPCCRFHPAEVNSRIGQSSAGHAAFALRLKARPSGIFT
Ga0307277_101204953	3300028881	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARP
Ga0311347_102830471	3300029923	Fen	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGD
Ga0311342_102062941	3300029955	Bog	KMNRRISQISPIHAAFAQIMEARLSGIVFFEATMRSLLLRPGDS
Ga0311333_104480652	3300030114	Fen	LLGMSLSPCCRFHPAEVNIRIGQYSVAHAAFALRW
Ga0311349_113949241	3300030294	Fen	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILTFEA
Ga0310039_100415391	3300030706	Peatlands Soil	LLSMSLSPCCRFHPAKVNNRVSQSSVVHAAFAFQLEARPLVAFT
Ga0075374_100501301	3300030855	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRMR
Ga0075401_100046241	3300030935	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALQLKARPSGILIFEATTR
Ga0075394_100131971	3300030969	Soil	DDFAPGRGGLLQLLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS
Ga0075394_100630861	3300030969	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRMRARPSGIFIFEATMRSLLLRP
Ga0099845_15427482	3300030975	Boreal Forest Soil	LLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALQLKARPSGILIFEATMRSLLLRPGDS
Ga0265773_10199171	3300031018	Soil	LLGMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRMQAQPSGIFTFEATTRSLLLRPGDSW
Ga0308201_100884301	3300031091	Soil	LGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRPGDS
Ga0308201_103279841	3300031091	Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARP
(restricted) Ga0255312_11349832	3300031248	Sandy Soil	LLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATTRSLLLRPGDS
Ga0272428_11686232	3300031520	Rock	MSLSPCCRFHPAKVNSRVGQSSAAHAAFAPWLWARPSGTLLFEATTRSLLLRPGDS
Ga0318516_106084721	3300031543	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLQARPSGILI
Ga0318555_104370011	3300031640	Soil	LLSMSLSPCCRFHPAEVISRVGQYSAAHAAFALRRQARPSGILTFEATT
Ga0318574_104670932	3300031680	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLQARP
Ga0306917_114558642	3300031719	Soil	LLSMSLSPCCHFHPAEANSRIGQFSAGHSAFALRLQARPSGKLIFEATTRSLLLRPGDS
Ga0306917_115640712	3300031719	Soil	LLSMSWSPCCRFHPAEVNSRIGQFSAGHSAFALRLQARPSGKLIFEATTRSLLLRPGDS
Ga0302321_1011485061	3300031726	Fen	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATMRSLLLRP
Ga0318501_103812731	3300031736	Soil	LLSMSLSPCCRFHPAEVISRVGQISAVHVAFALRLQARPSGILTFEATTRSLLLRPGDSWPPLGR
Ga0318502_108782152	3300031747	Soil	LLGMSLSPCCRFHPAEVTSRIGQCSASHSAFAPTWKARAWRAT
Ga0307477_101176512	3300031753	Hardwood Forest Soil	LLSMSLSPCCRFHPAEANSRIGQFSAGHSAFALRLRARPSGILIFEATMRSLLLRPGDS
Ga0307477_102613571	3300031753	Hardwood Forest Soil	LLSMSLSPCCRFHPAKVSSRVGQISAVHVAFALRLRARPLEVLTFEAT
Ga0307475_113472222	3300031754	Hardwood Forest Soil	LLSMSLSPCCRFHPAEANSRIGQFSTGHSAFALRLRARPSGILIFEAT
Ga0318521_109074542	3300031770	Soil	LLGMSLSPCCRFHPAEVTSRIGQCSASHSAFAPTLKARPSGIHF
Ga0318548_100727352	3300031793	Soil	SMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLQARPSGILIFEATMRSLLLRPGDS
Ga0318550_104242971	3300031797	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLQARPSGILIFEATMRSLLL
Ga0307478_104987041	3300031823	Hardwood Forest Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRMRARPSGILTFEATAR
Ga0310907_107195621	3300031847	Soil	LLGMSLPPCCRFHPAEMRCRVSQISASHAAFALQLQARPSDPLIFEATCAFTF
Ga0306923_107345932	3300031910	Soil	LLGMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEAT
Ga0310913_107269972	3300031945	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMRSLLLRPGDSQPPLGR
Ga0306926_100855298	3300031954	Soil	EVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMRSLLLRLGDS
Ga0318530_104522641	3300031959	Soil	LLSMSLSPCCRFHPAEVISRVGQISAVHVAFALRLQARPSGI
Ga0318556_101589331	3300032043	Soil	LLSMSLSPCCRFHPAEANSRIGQFSTGHSAFALRLRARPSGMLIFEATMRS
Ga0318533_110887671	3300032059	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMRSLL
Ga0318505_102829091	3300032060	Soil	AEVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMRSLLLRLGDS
Ga0318553_104676591	3300032068	Soil	LLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRL
Ga0306924_124813702	3300032076	Soil	LLSMSLSPCCRFHPAEANSRIGQFSAGHSAFALRLQARPSGKLIFEATTRSLLLRPGDS
Ga0306924_126301431	3300032076	Soil	LLSMSLSPCCRFHPTEVNSRIGQFSAGHSAFALRLRARPSGIFTFE
Ga0316040_1069311	3300032121	Soil	LLSMSLSPCCRFHPAKVSSRVGQISAVHVAFALRLQARPSGILTFEATMRSL
Ga0315742_132951981	3300032756	Forest Soil	LLSMSLSPCCRFHPAEVNIRIGQSSAAHAAFALRLKARPSGILIFEATTRLLLLRP
Ga0335078_126884381	3300032805	Soil	LLGISLSPCCRFHPAEVNIRIGQSSAAHAAFALQLKA
Ga0310914_100374691	3300033289	Soil	SPGRGGFLQLLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGIFIFEATMRSLLLRLGDS
Ga0318519_101633171	3300033290	Soil	AEVNSRIDQFSAGHSAFALRLQARPSGILIFEATMRSLLLPPGDS
Ga0334804_056131_2_124	3300033818	Soil	MLGMSLSPCCRFHPAKMNRRISQISPIHAAFAQIMEARLSG
Ga0314799_040759_1_165	3300034674	Soil	MLSMSLSPCCRFHPAEVNSRIGQFSAGHSAFALRLRARPSGTLIFEATMRSLLLR

Hidden Markov Model


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