NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F041174

Metagenome / Metatranscriptome Family F041174

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F041174
Family Type Metagenome / Metatranscriptome
Number of Sequences 160
Average Sequence Length 73 residues
Representative Sequence LDFFQGRNRSRVAVVVTADGRRVNVPLRDLEPQGVSLLDLLRSLLAGLDGLLGLLITGSRRENGGTRRDGRR
Number of Associated Samples 143
Number of Associated Scaffolds 160

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.12 %
% of genes near scaffold ends (potentially truncated) 28.75 %
% of genes from short scaffolds (< 2000 bps) 83.75 %
Associated GOLD sequencing projects 136
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (65.625 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.875 % of family members)
Environment Ontology (ENVO) Unclassified
(20.625 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(35.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 25.00%    β-sheet: 10.00%    Coil/Unstructured: 65.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 160 Family Scaffolds
PF02776TPP_enzyme_N 39.38
PF13560HTH_31 5.00
PF00330Aconitase 2.50
PF01381HTH_3 1.25
PF00990GGDEF 1.25
PF08502LeuA_dimer 0.62
PF00682HMGL-like 0.62
PF07991IlvN 0.62
PF13492GAF_3 0.62
PF00107ADH_zinc_N 0.62
PF13365Trypsin_2 0.62
PF00694Aconitase_C 0.62
PF13602ADH_zinc_N_2 0.62
PF13710ACT_5 0.62
PF00702Hydrolase 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 160 Family Scaffolds
COG0059Ketol-acid reductoisomeraseAmino acid transport and metabolism [E] 1.25
COG0119Isopropylmalate/homocitrate/citramalate synthasesAmino acid transport and metabolism [E] 0.62
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 0.62


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.25 %
UnclassifiedrootN/A33.75 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2032320004|FACEMD_FWMYIUC02GEEZ5All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300000854|WSSedB2T2DRAFT_1007054Not Available1069Open in IMG/M
3300000956|JGI10216J12902_113364139All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300002549|JGI24130J36418_10057189All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300002568|C688J35102_120839226All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300003312|P12013IDBA_1004459All Organisms → cellular organisms → Bacteria8133Open in IMG/M
3300003461|P42013CM_1009912All Organisms → cellular organisms → Bacteria2837Open in IMG/M
3300003541|JGI20214J51650_10090256Not Available2076Open in IMG/M
3300004006|Ga0055453_10062341All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300004018|Ga0055452_10103256Not Available916Open in IMG/M
3300004146|Ga0055495_10007643Not Available1570Open in IMG/M
3300004157|Ga0062590_102447037All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300004282|Ga0066599_100727124All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300004480|Ga0062592_101611878All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300004778|Ga0062383_10275051All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300004779|Ga0062380_10079442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1177Open in IMG/M
3300005329|Ga0070683_101120670Not Available756Open in IMG/M
3300005345|Ga0070692_10292124All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300005445|Ga0070708_100056083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3504Open in IMG/M
3300005455|Ga0070663_100966483Not Available739Open in IMG/M
3300005457|Ga0070662_101527589All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005467|Ga0070706_100065128All Organisms → cellular organisms → Bacteria3370Open in IMG/M
3300005547|Ga0070693_100524363All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300005564|Ga0070664_100579098All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300005618|Ga0068864_101284399Not Available732Open in IMG/M
3300005719|Ga0068861_101308760All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300005833|Ga0074472_10014610All Organisms → cellular organisms → Bacteria4174Open in IMG/M
3300005833|Ga0074472_11180382All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005840|Ga0068870_11373446All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005897|Ga0075281_1078813All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300006057|Ga0075026_100403461All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300006606|Ga0074062_12245890Not Available550Open in IMG/M
3300006854|Ga0075425_100104898All Organisms → cellular organisms → Bacteria3218Open in IMG/M
3300006871|Ga0075434_100405765All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300006904|Ga0075424_102078541All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300007790|Ga0105679_10627539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_141656Open in IMG/M
3300009029|Ga0066793_10160055All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300009079|Ga0102814_10852453All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300009083|Ga0105047_10267360Not Available1833Open in IMG/M
3300009085|Ga0105103_10509310All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300009094|Ga0111539_10260989All Organisms → cellular organisms → Bacteria2016Open in IMG/M
3300009094|Ga0111539_11551494Not Available768Open in IMG/M
3300009131|Ga0115027_10620305Not Available799Open in IMG/M
3300009167|Ga0113563_10987832Not Available968Open in IMG/M
3300009177|Ga0105248_11620052Not Available733Open in IMG/M
3300009553|Ga0105249_11350107All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300009789|Ga0126307_10017118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5401Open in IMG/M
3300009789|Ga0126307_10378073All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300009789|Ga0126307_10827134All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300009840|Ga0126313_10021158All Organisms → cellular organisms → Bacteria4330Open in IMG/M
3300009840|Ga0126313_10327786Not Available1202Open in IMG/M
3300009868|Ga0130016_10000061All Organisms → cellular organisms → Bacteria241427Open in IMG/M
3300010036|Ga0126305_10126123All Organisms → cellular organisms → Bacteria1569Open in IMG/M
3300010036|Ga0126305_10177280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_141340Open in IMG/M
3300010036|Ga0126305_10390312All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300010037|Ga0126304_10799905All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300010046|Ga0126384_11840709Not Available576Open in IMG/M
3300010047|Ga0126382_11476585All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300010047|Ga0126382_12206284All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300011007|Ga0139299_1015429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_141032Open in IMG/M
3300012469|Ga0150984_113015447All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300012884|Ga0157300_1027631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium790Open in IMG/M
3300012897|Ga0157285_10171288All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300012900|Ga0157292_10049393All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300012908|Ga0157286_10137990All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300012943|Ga0164241_10230925Not Available1323Open in IMG/M
3300012957|Ga0164303_10529397All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300012958|Ga0164299_10243747Not Available1069Open in IMG/M
3300012984|Ga0164309_11878849All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300012988|Ga0164306_11885132All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012989|Ga0164305_11802838All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300013315|Ga0173609_10762574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1518Open in IMG/M
3300014311|Ga0075322_1104932Not Available663Open in IMG/M
3300014312|Ga0075345_1019280Not Available1266Open in IMG/M
3300014316|Ga0075339_1036692All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300014317|Ga0075343_1007013Not Available1676Open in IMG/M
3300014502|Ga0182021_10589753All Organisms → cellular organisms → Bacteria1329Open in IMG/M
3300014745|Ga0157377_11046674All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300014969|Ga0157376_10739333All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300015077|Ga0173483_10411320Not Available697Open in IMG/M
3300015359|Ga0134085_10269429All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300015371|Ga0132258_12951243Not Available1180Open in IMG/M
3300015372|Ga0132256_103704003Not Available514Open in IMG/M
3300015373|Ga0132257_104453450Not Available510Open in IMG/M
3300015374|Ga0132255_101655268All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300018465|Ga0190269_10151587All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300018481|Ga0190271_11051774Not Available938Open in IMG/M
3300019361|Ga0173482_10437882All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300022309|Ga0224510_10050308All Organisms → cellular organisms → Bacteria2239Open in IMG/M
3300023263|Ga0247800_1114222All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300025479|Ga0208588_1021041Not Available1424Open in IMG/M
3300025481|Ga0208079_1096493Not Available550Open in IMG/M
3300025484|Ga0208587_1066791All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300025792|Ga0210143_1056148Not Available701Open in IMG/M
3300025910|Ga0207684_10275175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1452Open in IMG/M
3300025940|Ga0207691_10311204Not Available1351Open in IMG/M
3300025944|Ga0207661_11090356Not Available735Open in IMG/M
3300025960|Ga0207651_11520194Not Available603Open in IMG/M
3300025982|Ga0208139_1033816All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300026089|Ga0207648_10670150Not Available960Open in IMG/M
3300026118|Ga0207675_101388062All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300026934|Ga0207816_1030922All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300027313|Ga0207780_1028239All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300027330|Ga0207777_1010608All Organisms → cellular organisms → Bacteria1943Open in IMG/M
3300027843|Ga0209798_10095965All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300027897|Ga0209254_10013315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi7565Open in IMG/M
3300028674|Ga0302161_10040177All Organisms → cellular organisms → Bacteria1128Open in IMG/M
3300028755|Ga0307316_10284125All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300028778|Ga0307288_10066678Not Available1266Open in IMG/M
3300028782|Ga0307306_10229128All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300028802|Ga0307503_10022570All Organisms → cellular organisms → Bacteria2094Open in IMG/M
3300028861|Ga0302259_1174848All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300029987|Ga0311334_10503214All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300029989|Ga0311365_10206091Not Available1693Open in IMG/M
3300029990|Ga0311336_10379616Not Available1182Open in IMG/M
3300030000|Ga0311337_10180433Not Available1726Open in IMG/M
3300030019|Ga0311348_11164568All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300030114|Ga0311333_11584758All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300030339|Ga0311360_10114163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2248Open in IMG/M
3300031226|Ga0307497_10358232All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300031232|Ga0302323_100161948All Organisms → cellular organisms → Bacteria2231Open in IMG/M
3300031232|Ga0302323_100387658Not Available1473Open in IMG/M
3300031256|Ga0315556_1000979All Organisms → cellular organisms → Bacteria17590Open in IMG/M
3300031367|Ga0307440_1003772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi6622Open in IMG/M
3300031521|Ga0311364_10429079Not Available1340Open in IMG/M
3300031665|Ga0316575_10146941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes971Open in IMG/M
3300031726|Ga0302321_100406648All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Cordycipitaceae → Beauveria → Beauveria bassiana1483Open in IMG/M
3300031726|Ga0302321_101096894Not Available909Open in IMG/M
3300031727|Ga0316576_10418821All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300031834|Ga0315290_10148833Not Available2012Open in IMG/M
3300031834|Ga0315290_10445885Not Available1133Open in IMG/M
3300031892|Ga0310893_10053418Not Available1351Open in IMG/M
3300031903|Ga0307407_10566018Not Available842Open in IMG/M
3300031918|Ga0311367_10029983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia5899Open in IMG/M
3300031939|Ga0308174_11146169All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300031943|Ga0310885_10381549Not Available747Open in IMG/M
3300032013|Ga0310906_10974001Not Available608Open in IMG/M
3300032018|Ga0315272_10167756All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300032018|Ga0315272_10175647All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300032018|Ga0315272_10715687All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300032061|Ga0315540_10004011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi8093Open in IMG/M
3300032139|Ga0316580_10168047All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300032174|Ga0307470_10404241Not Available967Open in IMG/M
3300032256|Ga0315271_10085362Not Available2367Open in IMG/M
3300032256|Ga0315271_10109511Not Available2113Open in IMG/M
3300032256|Ga0315271_10175177Not Available1701Open in IMG/M
3300032256|Ga0315271_10291502Not Available1339Open in IMG/M
3300032420|Ga0335397_10255188All Organisms → cellular organisms → Bacteria1602Open in IMG/M
3300032893|Ga0335069_10236295All Organisms → cellular organisms → Bacteria2206Open in IMG/M
3300033233|Ga0334722_10018845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5962Open in IMG/M
3300033291|Ga0307417_10351017All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300033482|Ga0316627_101351275All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300033483|Ga0316629_11685107All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300033551|Ga0247830_10368617All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300034053|Ga0373890_019164Not Available992Open in IMG/M
3300034088|Ga0373912_0097108All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300034157|Ga0370506_116505Not Available604Open in IMG/M
3300034192|Ga0373896_003539Not Available1058Open in IMG/M
3300034281|Ga0370481_0000723All Organisms → cellular organisms → Bacteria8836Open in IMG/M
3300034281|Ga0370481_0237193Not Available652Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.88%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen8.75%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment6.25%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.12%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.12%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.12%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.50%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.50%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.50%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.50%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.88%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.88%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.88%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry1.88%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.25%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.25%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment1.25%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.25%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.25%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.25%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.25%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.62%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.62%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.62%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.62%
Basal IceEnvironmental → Aquatic → Freshwater → Ice → Glacier → Basal Ice0.62%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater0.62%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.62%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.62%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.62%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.62%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.62%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil0.62%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.62%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.62%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.62%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.62%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.62%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.62%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment0.62%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2032320004Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2-EnvironmentalOpen in IMG/M
3300000854Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B2 TuleEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002549Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003312Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P1 sampleEnvironmentalOpen in IMG/M
3300003461Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P4 sampleEnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004018Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2EnvironmentalOpen in IMG/M
3300004146Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004282Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sedimentEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005897Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009083Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300009868Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plantEngineeredOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300011007Basal ice microbial communities from Matanuska glacier, Alaska, USA - MataBEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013315Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1BEngineeredOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014312Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014316Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1EnvironmentalOpen in IMG/M
3300014317Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300022309Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300023263Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6EnvironmentalOpen in IMG/M
3300025479Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025481Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025484Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025982Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105 (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026934Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 10 (SPAdes)EnvironmentalOpen in IMG/M
3300027313Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)EnvironmentalOpen in IMG/M
3300027330Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300028674Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028861Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4EnvironmentalOpen in IMG/M
3300029987I_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300029989III_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031256Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10EnvironmentalOpen in IMG/M
3300031367Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-10EnvironmentalOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031665Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3Host-AssociatedOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031727Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5Host-AssociatedOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032061Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10EnvironmentalOpen in IMG/M
3300032139Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrBHost-AssociatedOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032420Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033291Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-10EnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034053Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.3EngineeredOpen in IMG/M
3300034088Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.1EngineeredOpen in IMG/M
3300034157Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18EnvironmentalOpen in IMG/M
3300034192Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.3EngineeredOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACEMDA_46896002032320004SoilLDFFSDRNRSKVAVVVTADGRRVTVPLRDLQPQDVSLLGLLRSLLAGLEDLLGLLITGSRRENGGTRRNERH
WSSedB2T2DRAFT_100705423300000854WetlandLGFFQGRDHKAVAVVVTSDGRRVTVPLSDLQPQGASLLELLRSLLAGLDGLLGLLITGSRRENRGTRRDGSR*
JGI10216J12902_11336413913300000956SoilLDVFHGHHRNAVAVVVTADGRRVTVPVRDLSTDDVSPLDLLRSLLAGLEGLLGLLITGSRRENGGTRRNERR*
JGI24130J36418_1005718913300002549Arctic Peat SoilMAGFEESGRLDFFQGRNRNTVVVVVTADGRRVNVPLRDLAPQGVSLLDLLRSLQLGLESLLGLLITGSRRENGGTRRDGSH*
C688J35102_12083922623300002568SoilLARFDRLDRHHVAIVVTSDGRRVQVPVRHPSPVDPLLDVLRSLLLGLEGLLGLLITGSRRENGRTRRDGR*
P12013IDBA_100445943300003312Ore Pile And Mine Drainage Contaminated SoilVTRSDGFDRRPVAVGLTRDGRRVHLPVGDQNLAPVSLDDLRSLLAGLESLLGLLITGSRRENGGTRRDERR*
P42013CM_100991223300003461Ore Pile And Mine Drainage Contaminated SoilVTRSDGFDRRPVAVGLTRDGRRVHLPVGNQNLAPVSLDVLRSLLAGLESLLGLLITGSRRENGGTRRDERR*
JGI20214J51650_1009025623300003541WetlandLGFFQGRDHKAVAVVVTSDGRRVTVPLSDLQHQGVSLLELLRSLLAGLDGLLGLLITGSRRENRGTRRDGSR*
Ga0055453_1006234113300004006Natural And Restored WetlandsVGFFSDHQRRKVAVVVTADGRRVTVPLRDLEPRDGSLLGQLRSLLADFEDVLGLLITGSRRENGGTRRDERH*
Ga0055452_1010325613300004018Natural And Restored WetlandsLDFFQGRDRRAVAVVVTSDGRRVTVPLRDLDGHSSALLDLLRSLLAGLDGLLGLLITGSRRENGGTRRDERH*
Ga0055495_1000764323300004146Natural And Restored WetlandsVESGRLDFFQDRDRRPVAVVVTTDGRRVTVPLRDLETQDASLLGLLRSLLAGLESLLGLLITGSRRENGGTRRDERR*
Ga0062590_10244703713300004157SoilVAVVVTTDGRRVQMPLNDAGLNDGSLLGLLRSLLVGLDGLLGLLITGSRRENGGTRRDGR
Ga0066599_10072712423300004282FreshwaterLDFSQGRNRSRIAVVVTADGRRVNVPLRDLEPQGVSPLDLIRSLLAGLESLLGLLITGSRRENGGTRRDGRH*
Ga0062592_10161187823300004480SoilLDFFQGHSRSRVAVVVTADGRRVTVPLRDLESRNVSLLDLLRSLLAGLESLGLLITGSRRENGGTRRNERH
Ga0062383_1027505123300004778Wetland SedimentMESGRLDFSQGRNRSRVAVVVTADGRRVNVPLRDLEPQDVSPLALLRSLLAGLESLLGLLITGSRRENGGTRRNQRR*
Ga0062380_1007944213300004779Wetland SedimentMESGRLDFSQGRNRSRVAVVVTADGRRVNVPLRDLEPQDVSPLALLRSLLAGLESLLGLLITGSRRENGGTRRTGRH*
Ga0070683_10112067023300005329Corn RhizosphereEPAAERGNLEPGRLDFFQGRNRSRVVIVVMADGRRRTVPLRDFEPQGVSPVDLLRSLLAGLESLGLLLITGSRRENGGTRRDGRR*
Ga0070692_1029212423300005345Corn, Switchgrass And Miscanthus RhizosphereLDFFQGHSRNRVAVVVTSDGRRVTVPLRDLESQDVSLLGLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0070708_10005608333300005445Corn, Switchgrass And Miscanthus RhizosphereLGLFHRSDRRHIAVVVTTDGRRVQLPLRDSGLQDVSLLGLLRSLLAGIDGLLGLLITGSRRENGGTRRDGR
Ga0070663_10096648323300005455Corn RhizosphereHSADLATAWGLQESGRLDFFQGHSRSRVAVVVTADGRRVTVPLRDLAHQDVSPLDLLRSLLVGLESLLVLLITGSRRENGGTRRNERH*
Ga0070662_10152758923300005457Corn RhizosphereGRLDFFQGHSRKRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0070706_10006512823300005467Corn, Switchgrass And Miscanthus RhizosphereLGLFHRSDRRHIAVVVTTDGRRVQLPLRDSGLQDVSLLGLLRSLLAGIDGLLGLLITGSRRENGGTRRDGRS*
Ga0070693_10052436323300005547Corn, Switchgrass And Miscanthus RhizosphereLDFFQGRSRSRVAVVVTADGRRVTVPLRDLHSQDVSPLDLLRSLLVGLESLLVLLITGSRRENGGSRRNERH*
Ga0070664_10057909833300005564Corn RhizosphereMFGDRQRSAVAVVVTTDGRRVTVPMHDLPSKDVSLLDLLRSLLAGLDGLLGLLITGSRRENGGTRRDQRH*
Ga0068864_10128439913300005618Switchgrass RhizosphereVQESGRLDFFQGHSRKRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0068861_10130876023300005719Switchgrass RhizosphereTAWGLQESGRLDFFQGHSRSRVAVVVTADGRRVTVPLRDLAHQDVSPLDLLRSLLVGLESLLVLLITGSRRENGGTRRNERH*
Ga0074472_1001461053300005833Sediment (Intertidal)MESGRLDFSQGRNRSRVAVVVTADGRRVNVPLRDLEPQGVSPLALLRSLLAGLESLVGLLITGSRRENGGTRRTGRH*
Ga0074472_1118038213300005833Sediment (Intertidal)HRYSSRTRRMAGQQESGRLDFFQGRSRNRVAVVVTADGRRVNVPLRDLNTGGVSPLDLLRSLLAGLESLLGLLITGSRRENGGTRRDGSR*
Ga0068870_1137344613300005840Miscanthus RhizosphereMGGYTPRTPLPAGVQELGRLDFFQGHSRNRVAVVVTSDGRRVTVPLRDLESQDVSLLGLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0075281_107881313300005897Rice Paddy SoilDGRAGVSVGYFEKRDRRAVAVVVTTDGRRVTVPTSDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGTRRNERH*
Ga0075026_10040346113300006057WatershedsMTGRQEHGRVGLFENRDRSALAVVVTTDGRRVTVPVRDLALRGGSPLDLLRSLLLGLDGLFGLLITGSRRENGGSRRDGRR*
Ga0074062_1224589023300006606SoilLDFFQGRNRSRVAIVVTSDGRRRTVPLRDLEPQGVFAVDLVRSLLAGLDGLLELLLITGSRRENGGTR
Ga0075425_10010489823300006854Populus RhizosphereLGFFEDRHHRPVAVVVTSDGRRVTVPVHDLASRDVSVLDLLRSLLAGLEGLLGLLITGSRRENGGTRRDQRR*
Ga0075434_10040576543300006871Populus RhizosphereLGFFEDRHHRPVAVVVTSDGRRVTVPVHDLASRDVSVLDLLRSLLAGLEGLLGLLITGSRRENGGTRRDGRS*
Ga0075424_10207854133300006904Populus RhizosphereLGFFEDRHHRPVAVVVTSDGRRVTVPVHDLASRDVSVLDLLRSLLAGLEGLLGLLITGSRRENGGTRR
Ga0105679_1062753923300007790SoilLDFFQGRDRSRVAVVVTSDGRRVNVPLRDLEPQDVSLLDLLRSLLAGLEGLLGLLITGSRRENGGTRRTERR*
Ga0066793_1016005523300009029Prmafrost SoilLGFFQGRDRRVAVVVTADGRRVTVPLRDLDLQGGSPLDLLRSLLAGLESLLGLLITGSRRENGGTRRDQRH*
Ga0102814_1085245313300009079EstuarineLDFFQGRSRSRVAVVGTADGRRVTVPLRDLESQDVFPLSLLRSLLAGLESLLGLLITGSRRENGGTRRDGRH*
Ga0105047_1026736023300009083FreshwaterLDFFQGRNRSRVAVVVTADGRRVNVPLRDLEPQGVSLLDLIRSLLAGLDGLLGLLITGSRRENGGTRRDGRH*
Ga0105103_1050931023300009085Freshwater SedimentLDLFNGRDRRKVAVVVTTDGRRVHLPVNDSPSSASLLDLVRSLLAGLESLLGLLITGSRRENGGTRRDER*
Ga0111539_1026098923300009094Populus RhizosphereLARFDGLHRRHVAIVVTSDGRRVPMPVRDSDPLLDLLRSLLLGLEGLLGLLITGSRREDGRTRRDGR*
Ga0111539_1155149413300009094Populus RhizosphereTPLPAGVQESGRLDFFQGHSRNRVAVVVTADGRRVTMPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0115027_1062030523300009131WetlandIAVVVTADGRRVNVPLRDLEPQGVSPLDLIRSLLAGLESLLGLLITGSRRENGGTRRDGRH*
Ga0113563_1098783213300009167Freshwater WetlandsLDFFQDRDRRPVVVVVTADGRRVTVPLRDLETQDASLLGLLRSLLAGLESLLGLLITGSRRENGGTRRDERR*
Ga0105248_1162005213300009177Switchgrass RhizosphereLDFFQGRNRSRVVIVVMADGRRRTVPLRDFEPQGVSPVDLLRSLLAGLESLGLLLITGSRRENGGTRRDGRR*
Ga0105249_1135010713300009553Switchgrass RhizosphereLDFFQGHSRNRVAVVVTADGRRVTVPLRDLAHQDVSPLDLLRSLLVGLESLLVLLITGSRRENGGTRRNERH*
Ga0126307_1001711823300009789Serpentine SoilLDFFQGRSRSRVAVVVTADGRRVNVPLRDLDPQDVSPLDLLRSLLAGLEGLLGLLITGSRRENGGKRRNERH*
Ga0126307_1037807323300009789Serpentine SoilLDFFQGRNSSRVTVVVTADGRRVNVPLRDLEPQGVSPLDLLRSLLAGLESLLGLLITGSRRENGGTRRDER*
Ga0126307_1082713413300009789Serpentine SoilLDFFQGHSRSRVAVVVTSDGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0126313_1002115823300009840Serpentine SoilLDFFQGHSRSRVAVVVTADGRRVTVPLRDLEPQDVSLLDLLRSLRGRLEGLLGLLITGSRRENGGTRRNERH*
Ga0126313_1032778613300009840Serpentine SoilLDFFQGRNSSRVTVVVTADGRRVNVPLRDLEPQGVSPLDLLRSLLAGLGSLLGLLITGSRRENGGTRRDERH*
Ga0130016_10000061973300009868WastewaterVGLFENRDRRAVAVVVTADGRRVTVPSRDLQLGVSPLDILRSLLLGLEGLLGLLITGSRRENGGTRRNGRR*
Ga0126305_1012612323300010036Serpentine SoilLDFFQGHSRSRVAVTVTSDGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0126305_1017728023300010036Serpentine SoilLDFFQGRNSSRVTVVVTADGRRVNVPLRDLEPKGVSPLDLLRSLLAGLESLLGLLITGSRRENGGTRRDERH*
Ga0126305_1039031213300010036Serpentine SoilLDFFHGHSRSRVAVVVTADGRRVTVPLRDLEPQDVSLLDLLRSLRGRLEGLLGLLITGSRRENGGTRRNERH*
Ga0126304_1079990513300010037Serpentine SoilLDFFQGRNSSRVTVVVTADGRRVNVPLRDLEPQGVSPLDLLRSLLAGLESLLGLLITGSRRENGGTRRDERH*
Ga0126384_1184070923300010046Tropical Forest SoilLDFFQGRNRNRVTVVVRADGRRVNVPLRDLQPQLVSPLDLLRSLLAGIEELGLLLITGSRRGHGGTRRDGRR*
Ga0126382_1147658513300010047Tropical Forest SoilGRLGFFGDRHQRHVAVVVTADGRRVTVPVGDLDPQDVSLLDLIRSLLAGLESLLGLLITGSRRENGGTRRNERH*
Ga0126382_1220628413300010047Tropical Forest SoilLGFFGDRHQRHVAVVVTADGRRVSVPLRDLQTKDVSLLDLLRSLLAGLEDLLGLLITGSRRENGGTRRD*
Ga0139299_101542913300011007Basal IceLDFFQGRNRNLVAVVVTADGRRVNVPLRDLAPSDVSLLDLLRSLLVGLESLLGLLITGSRRENGGTRRDGSR*
Ga0150984_11301544723300012469Avena Fatua RhizosphereLDFFQGHSRSKVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNGRH*
Ga0157300_102763113300012884SoilLDFFQGHSRSRVAVVVTSDGRRVTVPLRDLESQDVSLLGLIRSLLAGLDGLLELITGSRRENGGMRRDER*
Ga0157285_1017128813300012897SoilLDFFQGHSRGRVAVVVTADGRRVTVPVRDLESQDVSLLDLIRSLLAGLESLGLLITGSRRENGGTRRNERH*
Ga0157292_1004939323300012900SoilLDFFQGHSRSRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0157286_1013799023300012908SoilLDFFQGHSRNRVAVVVTSDGRRVTVPLRDLESQDVSLLGLIRSLLAGLDSLLGLLITGSRRENGGTRRNER*
Ga0164241_1023092513300012943SoilLDFFQGHSRGRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0164303_1052939713300012957SoilMGVSRLGFFGDRQRVAVVVTTDGRRVTIPMSELPTGHVSLLDSLRSLLAGLDGLLGLLITGSRRENGGTRR
Ga0164299_1024374723300012958SoilLDFFQGHSRSRVAVVVTADGRRVTVPLRDLAHQDVSPLDLLRSLLVGLESLLVLLITGSRRENGGSRRNERH*
Ga0164309_1187884913300012984SoilMGVSRLGFFGDRQRVAVVVTTDGRRVTIPMSELPTGHVSLLDSLRSLLAGLDGLLGLLITGSRRENGGTRRDERH*
Ga0164306_1188513213300012988SoilMGVSRLGFFGDRQRVAVVVTTDGRRVTIPMSELPTGHVSLLDSLRSLLAGLDGLLGLLITGSRRENGGTRRTRR*
Ga0164305_1180283823300012989SoilLGLFGDRQRSAVAVVVTADGRRVTVPVHDLPSSNVSLLDLLRSLLAGLDGLLGLLITGSRRENGGT
Ga0173609_1076257423300013315SedimentMGVERLDFFSGKDRVAVVVTTDGRRMTVPLSDLDSKGVSLLRSLLAGLDGLLGLLITGSRRENGGTRKDGSH*
Ga0075322_110493213300014311Natural And Restored WetlandsLDFFSGKDRVAVVVTSDGRRVTVPLRDLDGHSSLLLDLLRSLLAGLDSLVGLLITGSRRENGGTRRDERH*
Ga0075345_101928013300014312Natural And Restored WetlandsLDFFQGRSSSRVAVVVTADGRRVTVPLRDLEPQGVSPLDLLRSLLAGLDSLLGLLITGSRRENGGTRRDERH*
Ga0075339_103669233300014316Natural And Restored WetlandsLDFFQDRDRSPVVVVVTADGRRVTVPLRDLETQDASLLGLLRSLLAGLESLLGLLITGSRRENGGTRRDERR*
Ga0075343_100701323300014317Natural And Restored WetlandsFADPRSAGARESGRLDFFQGRSSSRVAVVVTADGRRVTVPLRDLEPQGVSPLDLLRSLLAGLDSLLGLLITGSRRENGGTRRDERH*
Ga0182021_1058975343300014502FenLGFFENPDRRAIAVVVTTDGRRVTVPMRDFQPQVVSPLDLLRALLLGLEGLLGLLITGSRRENGGTRRNGRS*
Ga0157377_1104667413300014745Miscanthus RhizosphereLDFFQGHSRNRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0157376_1073933333300014969Miscanthus RhizosphereLGLFGDRQRSAVAVVVTADGRRVTVPVHDLPSSNVSLLDLLRSLLAGLDGLLGLLITGSRRENGGTRRDERH*
Ga0173483_1041132013300015077SoilGVQELGRLDFFQGHSRSRVAVVVTSDGRRVTVPVRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH*
Ga0134085_1026942923300015359Grasslands SoilLGLFHRSDRRHIAVVITTDGRRVQLPLRDSDLQDVSLLGLLRSLLAGIDGLLGLLITGSRRENGGTRGDRR*
Ga0132258_1295124323300015371Arabidopsis RhizosphereLDLFQDRNRSRVAVVVRADGRRVNVPLRDLHAQPVLPLDLLRSLLAGLESLGLLLITGSRRENGGTRRDGRR*
Ga0132256_10370400313300015372Arabidopsis RhizosphereLGFFGDRQRSAVAVVVTTDGRRVTVPMQDLPTKDVSLLDLLRSLLAGLDGLLGLLITGSRRENG
Ga0132257_10445345023300015373Arabidopsis RhizosphereLGLFGDRQRSAVAVVVTTDGRRVTVPVHGLPSSNVSLLGLLRSLLAGLDGLLGLLITG
Ga0132255_10165526823300015374Arabidopsis RhizosphereLDFFQGHSRSRVAVVVTADGRRVTVPLRDLESRNVSLLDLLRSLLAGLESLGLLITGSRRENGGTRRNERH*
Ga0190269_1015158723300018465SoilMESGRLDFFQGRSSSRVAVVVTADGRRVTVPLRDLEPQGVSPLDLIRSLLAGLESLLGLLITGSRRENGGTRRDERH
Ga0190271_1105177423300018481SoilLDFFQGHSRNRVAVVVTADGRRVTVPLRDLESQDVTPLALLRSLLAGLESLLGLLITGSRRENGGTRRDGRH
Ga0173482_1043788223300019361SoilLDFFQGHSRSRVAVVVTADGRRVTVPLRDLAHQDVSPLDLLRSLLVGLESLLVLLITGSRRENGGTRRNERH
Ga0224510_1005030833300022309SedimentVDLFQGRDRKAVAVAVTSDGRRVTVPLRDAGLQDVSLLGLLRSLLAGFESLLGLLITGSRRENGGTRRDERR
Ga0247800_111422213300023263SoilPLPAGVQESGRLDFFQGHSRNRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGMRRDGR
Ga0208588_102104123300025479Arctic Peat SoilLGFFENRDRRAIAVVVTTDGRRVNVPTRDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGTRRIGRR
Ga0208079_109649323300025481Arctic Peat SoilMAGFEESGRLDFFQGRNRNTVVVVVTADGRRVNVPLRDLAPQGVSLLDLLRSLQLGLESLLGLLITGSRRENG
Ga0208587_106679113300025484Arctic Peat SoilMAGFEESGRLDFFQGRNRNTVVVVVTADGRRVNVPLRDLAPQGVSLLDLLRSLQLGLESLLGLLITGSRRENGGTRRDGSH
Ga0210143_105614823300025792Natural And Restored WetlandsLDFFQGRDRHAVAVVVTSDGRRVTVPLRDLDGHSSFLLDLLRSLLAGLDSLVGLLITGSRRENGGTRRDERH
Ga0207684_1027517533300025910Corn, Switchgrass And Miscanthus RhizosphereLGLFHRSDRRHIAVVVTTDGRRVQLPLRDSGLQDVSLLGLLRSLLAGIDGLLGLLITGSRRENGGTRRDGRS
Ga0207691_1031120423300025940Miscanthus RhizosphereLDFFQGHSRNRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH
Ga0207661_1109035623300025944Corn RhizosphereREPGRLDFFQGRNRSRVVIVVMADGRRRTVPLRDFEPQGVSPVDLLRSLLAGLESLGLLLITGSRRENGGTRRDGRR
Ga0207651_1152019413300025960Switchgrass RhizosphereDFFQGRNRSRVVIVVMADGRRRTVPLRDFEPQGVSPVDLLRSLLAGLESLGLLLITGSRRENGGTRRDGRR
Ga0208139_103381623300025982Rice Paddy SoilPDPQECGRAGVGVGFFDNRDRRAVAVVVTTDGRRVTVPLRDLGAPGVSPLDLLRSLLAGIESLLGLLITGSRRENGGTRRNGRS
Ga0207648_1067015013300026089Miscanthus RhizosphereLDFFQGHSRSRVAVVVTSDGRHVTVPVRDLESQDVSLLDLIRSLLAGLDSLLGLLITGSRRENGGTRRNERH
Ga0207675_10138806223300026118Switchgrass RhizosphereHSADLATAWGLQESGRLDFFQGHSRSRVAVVVTADGRRVTVPLRDLAHQDVSPLDLLRSLLVGLESLLVLLITGSRRENGGTRRNERH
Ga0207816_103092223300026934Tropical Forest SoilMTGVRVGYFEHRDRRAVAVVITTDGRRVNVPSRDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGTRRVGRR
Ga0207780_102823923300027313Tropical Forest SoilVGLFSDRDRRAVAVVVTTDGRRVTIPSRDLQLGVSALDILRSLLLGLEGLLGLLITGSRRENGGSRRIGRR
Ga0207777_101060823300027330Tropical Forest SoilVGLFSDRDRRAVAVVVTTDGRRVTVPSRDLQLGVSALDILRSLLLGLEGLLGLLITGSRRENGGSRRIGRR
Ga0209798_1009596513300027843Wetland SedimentMESGRLDFSQGRNRSRVAVVVTADGRRVNVPLRDLEPQDVSPLALLRSLLAGLESLLGLLITGSRRENGGTRRT
Ga0209254_1001331563300027897Freshwater Lake SedimentMAGQQESGRLGFFQGRNRSAVAVVVTADGRRVNVPLRDLHTSDVSLLELLRSLQLGLEGLLGLLITGSRRENGGTRRDGSR
Ga0302161_1004017723300028674FenMTGVRESGRLDFFQGRNRNAVVVVVTADGRRVNVPLRDLNTSGVSLLDLLRSLELGLESLLGLLITGSRRENGGTRRDGSH
Ga0307316_1028412523300028755SoilGHSRSRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLESLLGLLITGSRRENGGTRRNGRH
Ga0307288_1006667823300028778SoilLDFFHGHSRSRVAVVVTADGRRVTVPLRDLESQDVSLLDLIRSLLAGLESLLGLLITGSRRENGGTRRDGR
Ga0307306_1022912823300028782SoilQELGRLDFFHGHSRSRVAVVVTADGRRVTVPVRDLESQGVSLLDLIRSLLAGLESLLGLLITGSRRENGGTRRNGRH
Ga0307503_1002257023300028802SoilLGFFGDRQRSAVAVVVTTDGRRVTVPLHELGSKDVSLLDLLRSLLAGLDGLLGLLITGSRRENGGTRRDQRH
Ga0302259_117484813300028861FenLGFFENPDRRAIAVVVTTDGRRVTVPMRDFQPQVVSPLDLLRALLLGLEGLLGLLITGSRRENGGTRRNGRS
Ga0311334_1050321423300029987FenVGFFENRDRRAVAVVVTTDGRRVLVPTRDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGTRRIGRK
Ga0311365_1020609123300029989FenLVVQREYGRLGFFVNPDRRAIAVVVTSDGRRVTVPMRDFQPQVVSPLDLLRALLLGLEGLLGLLITGSRRENGGTRRNGRS
Ga0311336_1037961613300029990FenRDRRAVAVVVTTDGRRVLVPTRDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGTRRIGRK
Ga0311337_1018043313300030000FenMVGEQEFYVGFFENRDRRAVAVVVTTDGRRVLVPTRDLQLGVSPLDLIRSLLLGLEGLLGLLITGSRRENGGSRRNGRG
Ga0311348_1116456813300030019FenLDFFQGRNRSRVAVVVTADGRRVNVPLRDLEPQGVSLLDLLRSLLAGLDGLLGLLITGSRRENGGTRRDGRR
Ga0311333_1158475813300030114FenAIAVVVTTDGRRVTVPMRDFQPQVVSPLDLLRALLLGLEGLLGLLITGSRRENGGTRRNGRS
Ga0311360_1011416353300030339BogMNGPQESGRLDFFQGRNRSRVAVVVTADGRRVNVPLRDLEPQGVSLLDLLRSLLAGLDGLLGLLISGSRRENGGTRRDGRR
Ga0307497_1035823213300031226SoilMGVSRLGFFGDRQRVAVVVTTDGRRVTIPMSELPTGHVSLLDSLRSLLAGLDGLLGLLITGSRRENGGTRRDERH
Ga0302323_10016194823300031232FenLGFFENPDRRAIAVVVTTDGRRVLVPTRDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGTRRIGRK
Ga0302323_10038765823300031232FenVGFFENRDRRAVAVVVTTDGRRVLVPTRDLQLGVSPLDLLRSLLLGLEGLLVLLITGSRRENGGTRRIGRR
Ga0315556_100097953300031256Salt Marsh SedimentLGLFSDRQRSKVAVVVTADGRRVSVPLRDLEPRDVSLLGLLRSLLAGLEEDLLLITGSRRENGGTRRDERH
Ga0307440_100377253300031367Salt MarshLGLFSDRQRSKVAVVVRADGRRVSVPLRDLEPRDVSLLGLLRSLLAGLEEDLLLITGSRRENGGTRRDERH
Ga0311364_1042907923300031521FenMVGEQEFYVGFFENRDRRAVAVVVTTDGRRVLVPTRDLQLGVSPLDLIRSLLLGLEGLLGLLITGSRRGNGGSRRNGRD
Ga0316575_1014694123300031665RhizosphereLGFFSDRQRRKVAVVVTADGRRLTVPLRDLESRDVSPLGLLRSLLAAFEDLLGLLITGSRRENGGSRRNERR
Ga0302321_10040664813300031726FenLDFFQGRNRNAVAVVVTADGRRVNVPLRDLNPSGVSLLDLLRSLELGLESLLGLLITGSRRENGGTRRDGS
Ga0302321_10109689413300031726FenMVGEQEFYVGFFENRDRRAVAVVVTTDGRRVLVPTRDLQLGVSPLDLIRSLLLGLEGLLGLLITGS
Ga0316576_1041882123300031727RhizosphereLDFFQGRSRSRVTVVVTADGRRVNVPLRDLDPQGVSPLALLRSLLVGLEGLLGLLITGSRRENGGTRRNGRR
Ga0315290_1014883313300031834SedimentMAGQQESGRLDFFQGRNRSAVVVVLTADGRRVNVPLRDLHTGGVSLLDLLRSLLAGLESLLGLLITGSRRENGGTRRDGSR
Ga0315290_1044588523300031834SedimentLDFSQGRNRSRIAVVVTADGRRVNVPLRDLEPQGVSPLDLIRSLLAGLESLLGLLITGSRRENGGTRRDGRH
Ga0310893_1005341813300031892SoilNRVAVVVTADGRRVTVPLRDLESQDVTPLALLRSLLAGLESLLELLITGSRRENGGMRRDGR
Ga0307407_1056601823300031903RhizosphereLDFFQGHSRNRVAVVVTSDGRRVTVPLRDLASQDVSLLDLLRSLLAGLDSLLGLLITGSRRENGGTRRNERH
Ga0311367_1002998353300031918FenLDFFQGRNRNAVAVVVTADGRRVNVPLRDLNTSGVSLLDLLRSLELGLESLLGLLITGSRRENGGTRRDGSH
Ga0308174_1114616923300031939SoilLDFFQGRNRSRVAVVIRADGRRVNVPLRDLDPQPVFPLDLLRSLLAGLEGLLGLLLITGSRRENGGTRRDGRR
Ga0310885_1038154923300031943SoilSHGMGGYTPRTPLPAGVQELGRLDFFQGHSRSRVAVVVTSDGRRVTVPVRDLASQDVSLLDLLRSLLAGLESLGLLITGSRRENGGTRRNERH
Ga0310906_1097400123300032013SoilNRVAVVVTADGRRVTVPLRDLESRNVSLLDLLRSLLAGLESLGLLITGSRRENGGTRRNERH
Ga0315272_1016775613300032018SedimentVGFFENRDRRAVAVVVTTDGRRVLVPTRDLQLGVSPLDLIRSLLLGLEGLLGLLITGSRRENGGSRRNGRD
Ga0315272_1017564723300032018SedimentLDLFGNRKASPIAIVVTADGRRLYVPVRDLAPQGVSPLDLLRSLLAGLGGLLGLLITGSRRENGGSRRGERK
Ga0315272_1071568713300032018SedimentFFENRDRRAVAVVVTTDGRRVTVPTRDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGTRRIGRR
Ga0315540_1000401133300032061Salt Marsh SedimentLGYFSDRQRRKVAVVVTADGRRVTVPLRDLESPDVSLLGLLRSLLAGFEDLLGLLITGSRRENGGSRRDQRH
Ga0316580_1016804723300032139RhizosphereTRESTGRLESGRLDFFQGRSRSRVTVVVTADGRRVNVPLRDLDPQGVSPLALLRSLLVGLEGLLGLLITGSRRENGGTRRNGRR
Ga0307470_1040424113300032174Hardwood Forest SoilMGVSRLGFFGDRQRVAVVVTTDGRRVTVPMSELPTGHVSLLDSLRSLLAGLDGLLGLLITGSRRENGGTRRNERH
Ga0315271_1008536223300032256SedimentLDFFQGRSRSRVAVVVTTDGRRVTVPLRDLEAQDVFPLSLLRSLLAGLESLLGLLITGSRRENGGTRRDGRH
Ga0315271_1010951113300032256SedimentLGFFQGKDRVVIVVRTDGRRVSVPLRDLDSQGVSLLRSLLAGLDGLLGLLITGSRRENGGTRRDGRH
Ga0315271_1017517723300032256SedimentLDFFQGRSRNRIGVVVTSDGRRVNVPLRDLENRNVSLLDLLRSLLAGLDSLLGLLITGSRRENGGTRRNERH
Ga0315271_1029150213300032256SedimentLGFFQGRDRVAVVVTSDGRRVSVPLRDLNTHDVSPLDLIRSLLAGLESLLGLLITGSRRENGGTRRDGSR
Ga0335397_1025518823300032420FreshwaterLDFFQGRNRSRVAVVVTADGRRVNVPLRDLEPQGVSLLDLIRSLLAGLDGLLGLLITGSRRENGGTRRDGRH
Ga0335069_1023629533300032893SoilLGFENRDRRAVAVVVTTDGRRVTVPSRDLQLGVSALDLLRSLLLGLEGLLGLLITGSRRENGGSRRIGRR
Ga0334722_1001884523300033233SedimentVGCFENRDRRAVAVVVTTDGRRVTVPTPDLQLGVSPLDLLRSLLLGLEGLLGLLITGSRRENGGSRRIGRR
Ga0307417_1035101723300033291Salt MarshSSRTRHGTGTRESGRLDFFQGRSRSRAAIVVTADGRRVNVPLRDLESQDVTPLALLRSLLAGLESLVGLLITGSRRENGGSRRNERR
Ga0316627_10135127523300033482SoilLDFFQDRDRRPVVVVVTADGRRVTVPLRDLETQDASLLGLLRSLLAGLESLLGLLITGSRRENGGTRRDERR
Ga0316629_1168510713300033483SoilMAGQQESGRLGVFQGRNRSAVAVVVTADGRRVNVPLRDLHTSGVSLLELLRSLQLGLEGLLGLLITGSRRENGGTRRDGSR
Ga0247830_1036861713300033551SoilLDFFQGHSRNRVAVVVTADGRRVTVPLRDLESRNVSLLDLLRSLLAGLESLALLITGSRRENGGTRRNERH
Ga0373890_019164_312_5243300034053Sediment SlurryVDFFSGKDRVAVVVTTDGRRVSVPVRQLRANGVSLLDLLRSLLAGLEGLLGLLITGSRRENGGTRRDERH
Ga0373912_0097108_155_3703300034088Sediment SlurryLDFFQGRDRRVAVVVTADGRRVTVPLRDLQPQGVSLPDLLRSLLAGLESLLGLLITGSRRENGGTRRDERR
Ga0370506_116505_413_6043300034157Untreated Peat SoilLDFFQGRNRSRVAVVVTADGRRVNVPLRDLEPQGVSLLDLLRSLLAGLDGLLGLLITGSRRENG
Ga0373896_003539_705_9383300034192Sediment SlurryMESGRLDFFQGRSRSRVTVVVTADGRRVNVPLRDLEPQGVSPLDLLRSLLAGLESLLGLLITGSRRENGGTRRDGRH
Ga0370481_0000723_1204_14193300034281Untreated Peat SoilLGFSLNRDRRAVRVAVTTDGRRVLVPSDLRLQGVSPLDLLRTLLLGLEGLLGLLITGSRRENGGTRRNGRR
Ga0370481_0237193_295_5343300034281Untreated Peat SoilLVGEQEFYVGFFENRDRRAVAVVVTTDGRRVLVPTRGLQLGVSPLDLIRSLLLGLEGLLGLLITGSRRGNGGSRRNGRG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.