NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F039117

Metagenome / Metatranscriptome Family F039117

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F039117
Family Type Metagenome / Metatranscriptome
Number of Sequences 164
Average Sequence Length 67 residues
Representative Sequence VYLEVTLVNGQNYSIPVEEGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIILVSPID
Number of Associated Samples 120
Number of Associated Scaffolds 164

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 41.72 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 85.98 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (60.366 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.829 % of family members)
Environment Ontology (ENVO) Unclassified
(29.268 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.244 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.20%    β-sheet: 32.26%    Coil/Unstructured: 50.54%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.34.2.1: SH3-domaind3i5ra_3i5r0.58192
b.38.1.5: LSM14 N-terminal domain-liked6f9wa_6f9w0.56446
b.38.1.0: automated matchesd4f7ug_4f7u0.55542
b.38.1.0: automated matchesd4c92d_4c920.55475
b.34.6.0: automated matchesd6l2aa16l2a0.55398


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 164 Family Scaffolds
PF00313CSD 6.10
PF13302Acetyltransf_3 3.66
PF00903Glyoxalase 1.83
PF07730HisKA_3 1.83
PF00353HemolysinCabind 1.22
PF03706LPG_synthase_TM 1.22
PF01799Fer2_2 1.22
PF04545Sigma70_r4 1.22
PF08031BBE 0.61
PF03734YkuD 0.61
PF13460NAD_binding_10 0.61
PF01272GreA_GreB 0.61
PF02417Chromate_transp 0.61
PF00916Sulfate_transp 0.61
PF01345DUF11 0.61
PF01553Acyltransferase 0.61
PF01872RibD_C 0.61
PF07883Cupin_2 0.61
PF01433Peptidase_M1 0.61
PF02148zf-UBP 0.61
PF03450CO_deh_flav_C 0.61
PF00005ABC_tran 0.61
PF02129Peptidase_S15 0.61
PF13377Peripla_BP_3 0.61
PF03476MOSC_N 0.61
PF00266Aminotran_5 0.61
PF05199GMC_oxred_C 0.61
PF13207AAA_17 0.61
PF03781FGE-sulfatase 0.61
PF13472Lipase_GDSL_2 0.61
PF07498Rho_N 0.61
PF13462Thioredoxin_4 0.61
PF13376OmdA 0.61
PF05239PRC 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 164 Family Scaffolds
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 1.83
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 1.83
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 1.83
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 1.83
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 1.22
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 0.61
COG5207Uncharacterized Zn-finger protein, UBP-typeGeneral function prediction only [R] 0.61
COG3217N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domainDefense mechanisms [V] 0.61
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.61
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.61
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 0.61
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.61
COG2059Chromate transport protein ChrAInorganic ion transport and metabolism [P] 0.61
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.61
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.61
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.61
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 0.61
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 0.61
COG0308Aminopeptidase N, contains DUF3458 domainAmino acid transport and metabolism [E] 0.61
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.61


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A60.37 %
All OrganismsrootAll Organisms39.63 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig58343Not Available641Open in IMG/M
2170459017|G14TP7Y01B6T06Not Available652Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0795657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1327Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0796969Not Available1773Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_11361373Not Available1205Open in IMG/M
3300000858|JGI10213J12805_10649329Not Available553Open in IMG/M
3300001686|C688J18823_10584897Not Available713Open in IMG/M
3300002568|C688J35102_120618170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1250Open in IMG/M
3300004081|Ga0063454_100017501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2171Open in IMG/M
3300004114|Ga0062593_100112208All Organisms → cellular organisms → Bacteria1960Open in IMG/M
3300004114|Ga0062593_101295336Not Available772Open in IMG/M
3300004156|Ga0062589_101193051Not Available728Open in IMG/M
3300004157|Ga0062590_101026423Not Available787Open in IMG/M
3300004480|Ga0062592_100157032Not Available1534Open in IMG/M
3300004643|Ga0062591_100988225Not Available799Open in IMG/M
3300004643|Ga0062591_102317386Not Available561Open in IMG/M
3300005105|Ga0066812_1006881Not Available735Open in IMG/M
3300005329|Ga0070683_101210128Not Available726Open in IMG/M
3300005329|Ga0070683_102204298Not Available529Open in IMG/M
3300005347|Ga0070668_100967449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium764Open in IMG/M
3300005438|Ga0070701_10221478All Organisms → cellular organisms → Bacteria1128Open in IMG/M
3300005441|Ga0070700_101545094Not Available565Open in IMG/M
3300005456|Ga0070678_100392271Not Available1204Open in IMG/M
3300005518|Ga0070699_101317106Not Available662Open in IMG/M
3300005530|Ga0070679_101442404Not Available635Open in IMG/M
3300005535|Ga0070684_101174530Not Available722Open in IMG/M
3300005547|Ga0070693_100126650All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium1591Open in IMG/M
3300005578|Ga0068854_101363184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium640Open in IMG/M
3300005578|Ga0068854_101887653Not Available549Open in IMG/M
3300005718|Ga0068866_11118797Not Available565Open in IMG/M
3300005719|Ga0068861_101006843Not Available796Open in IMG/M
3300005874|Ga0075288_1032385Not Available773Open in IMG/M
3300005937|Ga0081455_10776589Not Available603Open in IMG/M
3300006627|Ga0101571_11830922Not Available615Open in IMG/M
3300006894|Ga0079215_10016981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2369Open in IMG/M
3300009012|Ga0066710_100131034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3442Open in IMG/M
3300009012|Ga0066710_102178571Not Available810Open in IMG/M
3300009081|Ga0105098_10266201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium813Open in IMG/M
3300009100|Ga0075418_10006449All Organisms → cellular organisms → Bacteria13230Open in IMG/M
3300009100|Ga0075418_11054469Not Available880Open in IMG/M
3300009147|Ga0114129_11799377Not Available745Open in IMG/M
3300009553|Ga0105249_10050901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3777Open in IMG/M
3300009789|Ga0126307_10120401Not Available2089Open in IMG/M
3300009808|Ga0105071_1034956Not Available770Open in IMG/M
3300009809|Ga0105089_1010853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1127Open in IMG/M
3300009812|Ga0105067_1052147Not Available652Open in IMG/M
3300009812|Ga0105067_1106204Not Available515Open in IMG/M
3300009814|Ga0105082_1112704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300009816|Ga0105076_1108804Not Available543Open in IMG/M
3300009821|Ga0105064_1111286Not Available567Open in IMG/M
3300009840|Ga0126313_10330958Not Available1196Open in IMG/M
3300009840|Ga0126313_10349890Not Available1164Open in IMG/M
3300010038|Ga0126315_10342231Not Available930Open in IMG/M
3300010038|Ga0126315_10411356Not Available852Open in IMG/M
3300010038|Ga0126315_10573969Not Available726Open in IMG/M
3300010041|Ga0126312_10575366Not Available809Open in IMG/M
3300010042|Ga0126314_10088439All Organisms → cellular organisms → Bacteria2087Open in IMG/M
3300010044|Ga0126310_10077543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1945Open in IMG/M
3300010045|Ga0126311_10307211Not Available1196Open in IMG/M
3300010045|Ga0126311_10587036Not Available881Open in IMG/M
3300010045|Ga0126311_10714584All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300010399|Ga0134127_10189210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1905Open in IMG/M
3300010999|Ga0138505_100019188Not Available864Open in IMG/M
3300010999|Ga0138505_100071808Not Available513Open in IMG/M
3300012022|Ga0120191_10023203Not Available905Open in IMG/M
3300012204|Ga0137374_10000559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria38042Open in IMG/M
3300012204|Ga0137374_10071222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium3424Open in IMG/M
3300012204|Ga0137374_10104741All Organisms → cellular organisms → Bacteria2654Open in IMG/M
3300012204|Ga0137374_10810987Not Available693Open in IMG/M
3300012204|Ga0137374_11083901Not Available571Open in IMG/M
3300012212|Ga0150985_111025092Not Available847Open in IMG/M
3300012355|Ga0137369_10226124All Organisms → cellular organisms → Bacteria1430Open in IMG/M
3300012356|Ga0137371_10535453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium902Open in IMG/M
3300012358|Ga0137368_10364917Not Available957Open in IMG/M
3300012360|Ga0137375_10272482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1548Open in IMG/M
3300012360|Ga0137375_10836984Not Available736Open in IMG/M
3300012360|Ga0137375_11447424Not Available508Open in IMG/M
3300012469|Ga0150984_114718989Not Available850Open in IMG/M
3300012469|Ga0150984_118594866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1133Open in IMG/M
3300012891|Ga0157305_10121707Not Available670Open in IMG/M
3300012897|Ga0157285_10009579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1866Open in IMG/M
3300012897|Ga0157285_10010255Not Available1822Open in IMG/M
3300012907|Ga0157283_10116139Not Available741Open in IMG/M
3300012937|Ga0162653_100032426Not Available758Open in IMG/M
3300012941|Ga0162652_100033156Not Available783Open in IMG/M
3300013096|Ga0157307_1028045Not Available965Open in IMG/M
3300013297|Ga0157378_13079600Not Available517Open in IMG/M
3300014320|Ga0075342_1066118Not Available902Open in IMG/M
3300015201|Ga0173478_10414360Not Available649Open in IMG/M
3300015373|Ga0132257_100581190Not Available1382Open in IMG/M
3300015374|Ga0132255_101262481All Organisms → Viruses → Predicted Viral1113Open in IMG/M
3300015374|Ga0132255_102788478Not Available747Open in IMG/M
3300018000|Ga0184604_10339875Not Available533Open in IMG/M
3300018072|Ga0184635_10410277Not Available511Open in IMG/M
3300018422|Ga0190265_10099684All Organisms → cellular organisms → Bacteria2719Open in IMG/M
3300018422|Ga0190265_10932573All Organisms → cellular organisms → Bacteria → Terrabacteria group990Open in IMG/M
3300018422|Ga0190265_12903531Not Available573Open in IMG/M
3300018422|Ga0190265_13787120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300018429|Ga0190272_12668800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia548Open in IMG/M
3300018432|Ga0190275_10063635All Organisms → cellular organisms → Bacteria3135Open in IMG/M
3300018432|Ga0190275_11262803Not Available814Open in IMG/M
3300018466|Ga0190268_11159390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium636Open in IMG/M
3300018469|Ga0190270_10044802All Organisms → cellular organisms → Bacteria3023Open in IMG/M
3300018469|Ga0190270_10178479All Organisms → cellular organisms → Bacteria1765Open in IMG/M
3300018469|Ga0190270_10222520All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300019356|Ga0173481_10031880Not Available1697Open in IMG/M
3300019361|Ga0173482_10415549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium629Open in IMG/M
3300019362|Ga0173479_10267128Not Available762Open in IMG/M
3300019377|Ga0190264_10786472Not Available721Open in IMG/M
3300019876|Ga0193703_1030625Not Available835Open in IMG/M
3300019884|Ga0193741_1007898All Organisms → cellular organisms → Bacteria2816Open in IMG/M
3300020202|Ga0196964_10608098All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300022195|Ga0222625_1256622Not Available546Open in IMG/M
3300025904|Ga0207647_10188173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1197Open in IMG/M
3300025918|Ga0207662_10469273Not Available863Open in IMG/M
3300025927|Ga0207687_10705118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium857Open in IMG/M
3300025927|Ga0207687_11508463Not Available577Open in IMG/M
3300025938|Ga0207704_11188222All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300025944|Ga0207661_10134175Not Available2125Open in IMG/M
3300025944|Ga0207661_11450305Not Available629Open in IMG/M
3300025944|Ga0207661_11461654Not Available627Open in IMG/M
3300025945|Ga0207679_10616816Not Available979Open in IMG/M
3300026118|Ga0207675_100214039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1854Open in IMG/M
3300026535|Ga0256867_10006711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5048Open in IMG/M
3300026535|Ga0256867_10015068All Organisms → cellular organisms → Bacteria3344Open in IMG/M
3300026535|Ga0256867_10030768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2249Open in IMG/M
3300026535|Ga0256867_10082253All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300026785|Ga0207496_103550Not Available604Open in IMG/M
3300027169|Ga0209897_1018983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium957Open in IMG/M
3300027324|Ga0209845_1008663All Organisms → cellular organisms → Bacteria1730Open in IMG/M
3300027332|Ga0209861_1010306All Organisms → cellular organisms → Bacteria1408Open in IMG/M
3300027384|Ga0209854_1025673Not Available969Open in IMG/M
3300027511|Ga0209843_1016501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1475Open in IMG/M
3300027650|Ga0256866_1207195All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300027961|Ga0209853_1061351Not Available1016Open in IMG/M
3300028713|Ga0307303_10103921Not Available653Open in IMG/M
3300028722|Ga0307319_10012392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2601Open in IMG/M
3300028722|Ga0307319_10051878Not Available1288Open in IMG/M
3300028722|Ga0307319_10063420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1166Open in IMG/M
3300028744|Ga0307318_10033095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1688Open in IMG/M
3300028771|Ga0307320_10038327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1755Open in IMG/M
3300028771|Ga0307320_10062680Not Available1383Open in IMG/M
3300028771|Ga0307320_10098222Not Available1111Open in IMG/M
3300028876|Ga0307286_10024014Not Available1979Open in IMG/M
3300028876|Ga0307286_10031281Not Available1756Open in IMG/M
3300028878|Ga0307278_10000603All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium17932Open in IMG/M
3300030006|Ga0299907_10240667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M141487Open in IMG/M
3300030006|Ga0299907_10327473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1245Open in IMG/M
3300030336|Ga0247826_10298958Not Available1153Open in IMG/M
3300030336|Ga0247826_11272333Not Available592Open in IMG/M
3300030606|Ga0299906_10953896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia630Open in IMG/M
3300031092|Ga0308204_10023578Not Available1298Open in IMG/M
3300031228|Ga0299914_10652234Not Available894Open in IMG/M
3300031548|Ga0307408_100616484Not Available966Open in IMG/M
3300031548|Ga0307408_102197742Not Available533Open in IMG/M
3300031731|Ga0307405_11215439Not Available652Open in IMG/M
3300031740|Ga0307468_101248050Not Available673Open in IMG/M
3300031854|Ga0310904_10233106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1130Open in IMG/M
3300031901|Ga0307406_10495202All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium990Open in IMG/M
3300031903|Ga0307407_10058933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2234Open in IMG/M
3300031938|Ga0308175_100062319All Organisms → cellular organisms → Bacteria3283Open in IMG/M
3300031938|Ga0308175_102075599Not Available637Open in IMG/M
3300032002|Ga0307416_103309993Not Available539Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.83%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand7.93%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil7.32%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.88%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.44%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.22%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.22%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.22%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.22%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.22%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.22%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.22%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.61%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.61%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.61%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.61%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.61%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.61%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.61%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.61%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005105Soil and rhizosphere microbial communities from Laval, Canada - mgHPCEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006627Soil microbial communities from the Leymus chinensis steppe, China - after adding 28 g N m- 2, yr-1EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009808Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50EnvironmentalOpen in IMG/M
3300009809Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40EnvironmentalOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300026785Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027169Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027324Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027332Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027384Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027650Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeqEnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_046103702124908045SoilVYLEVTLVNGQNYSIPVEEGHSVEQELDLFLKREGRYATDWVPLMKAGRELFVRYEQIVLVSPMS
4ZMR_001050002170459017Switchgrass, Maize And Mischanthus LitterMYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPMD
ICChiseqgaiiDRAFT_079565733300000033SoilMYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPMX*
ICChiseqgaiiDRAFT_079696933300000033SoilMYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPMD*
ICChiseqgaiiFebDRAFT_1136137323300000363SoilMYLEVTLVNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
JGI10213J12805_1064932923300000858SoilMYLEVTLTNGQNFSIPIEAGHSVEQELELFLKREGRFAGEWAPLQKAGRELFVRYEHIVLVSPKSD*
C688J18823_1058489723300001686SoilVNGQNYSIPVEGGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
C688J35102_12061817013300002568SoilVSVPVYLEVTLLNGQNYSIPVEGEHSLEQELDLFLRRDGRYAGEWVPLMKAGRELFVRYEQIALVSPVAPN*
Ga0063454_10001750133300004081SoilVRNAKSLVSVPVYLEVTLLNGQNYSIPVEGEHSLEQELDLFLRRDGRYAGEWVPLMKAGRELFVRYEQIALVSPVAPN*
Ga0062593_10011220833300004114SoilMLRCVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGAGFRYKGEQGLFVRYEQIVLVSPMG*
Ga0062593_10129533613300004114SoilVFLEVTLTNGQNYSVPVEEGHSVEEELDLFLTRQGRYADEWVPLQKAGRKLFVRYEQVILVSPKSD*
Ga0062589_10119305113300004156SoilVFLEVTLANGQNYSVPIQDGHSLQQELDLFLNREGRYAGEWVPLQKSGRELFVRYENIVLVSPKTD*
Ga0062590_10102642323300004157SoilVNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
Ga0062592_10015703233300004480SoilVAVYLEVTLVNGQNYSISVEEGHSIEQELDLFLKREGRFASDWVPLMKAGRELFVRYDQVILVSPKT*
Ga0062591_10098822523300004643SoilVYLEVTLVNGQNYSISVEEGHSIEQELDLFLKREGRFASDWVPLMKAGRELFVRYDQVILVSPKT*
Ga0062591_10231738613300004643SoilVYLEVTLVNGQNYSIPVEGGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
Ga0066812_100688123300005105SoilVFLEVTLTNGQNYSIPIPDGHTLEQELDLFLGREGRYATEWVPLQKAGRELFVRYEQIVLVSPKAEGI*
Ga0070683_10121012823300005329Corn RhizosphereLGTEFLEVTLTNGQNYSVPIEEGHSLEEELDLFLKREGRYAGGWVPLQKAGRELFVRYETIILVSPKTS*
Ga0070683_10220429813300005329Corn RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGS*
Ga0070668_10096744923300005347Switchgrass RhizosphereVYLEVTLLNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIVLVSPID*
Ga0070701_1022147823300005438Corn, Switchgrass And Miscanthus RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTG*
Ga0070700_10154509423300005441Corn, Switchgrass And Miscanthus RhizosphereLGSVAVYLEVTLVNGQNYSIPVEEGHSVEQELDLFLRREGEYAAEWVPLQKAGRKLFVRYEQIALVSPVAD*
Ga0070678_10039227113300005456Miscanthus RhizosphereRRARTEALSSSAYLEVTLPNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGS*
Ga0070699_10131710623300005518Corn, Switchgrass And Miscanthus RhizosphereSAVDTGAGGNRRATPVYLEVTLINGQNYSILVQEGNSLDQELELFLHRGDRYAAEWVPLQKAGRQLFVRYEQIVLVSPKP*
Ga0070679_10144240413300005530Corn RhizosphereVFLEVTLANGQNYSVPIQDGHSLQQELDLFLNREGRYAGEWVPLQKSGRELFVRYENIVLVSPK
Ga0070684_10117453013300005535Corn RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGP*
Ga0070686_10107547323300005544Switchgrass RhizosphereSLGCSGGSRRLRCVYLEVTLLNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIVLVSPID*
Ga0070693_10012665043300005547Corn, Switchgrass And Miscanthus RhizosphereVGTVFLEVTLTNGQNYSVPIEEGHSLEEELDLFLKREGRYAGGWVPLQKAGRELFVRYEAIVLVSPKTS*
Ga0068854_10136318413300005578Corn RhizosphereGCSGGSRRLRCVYLEVTLLNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIVLVSPID*
Ga0068854_10188765323300005578Corn RhizosphereQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGP*
Ga0068866_1111879713300005718Miscanthus RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIV
Ga0068861_10100684313300005719Switchgrass RhizosphereGGSRRLRCVYLEVTLLNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIVLVSPID*
Ga0075288_103238523300005874Rice Paddy SoilVAVYLEVTLVNGQNYSIPVEEGHSVEEELNSFLKREGRYVSDWVPLMKAGRELFVRYDQIILVSPMA*
Ga0081455_1077658913300005937Tabebuia Heterophylla RhizosphereVYLEVTLTNGQNYSIPIEEGHSLEQELELFLNREGRYEAGWVPLQKAGRELFVRYEQIML
Ga0101571_1183092223300006627SoilVYLEVTLLNGQNYSIPVEEGRSVEEELELFLRQDGRYAADWVPLQKASRKLFVR*
Ga0079215_1001698143300006894Agricultural SoilMYLEVTLTNGQNYSIPIEEGQTVERELELFLTREGRYAAEWVPLQKAGRDLFVRYEQIVLVSPKTD*
Ga0066710_10013103453300009012Grasslands SoilVYLEVTLVNGQNYSIPVQEGHSVDQELELFLNREGRYADEWVPLQKAGRDLFVRYEQIVLVSPKR
Ga0066710_10217857113300009012Grasslands SoilVYLEVTLTNGQNYSIAIQAGHSLEQELELFLKRADRYAADWIPLQKPERELFVRYKQILLVSARA
Ga0105098_1026620113300009081Freshwater SedimentVSRERLADVLWRPVYLEVTLINGQNFSIPIEEGHSVEQELELFLERKGRYGGDWVPLQKAGRELFVRYEQIALVSPKSD*
Ga0075418_10006449123300009100Populus RhizosphereLYLEVTLVNGQNFSIPIEQGNSVERELELFLKREGRYADEWVPLQKAGRELFVRYEQIVLVSPKND*
Ga0075418_1105446923300009100Populus RhizosphereLEALLYLEVTLVNGQNFSIPIEQGHSVERELELFLKREGRFADEWVPLQKAGRELFVRYEQIVLVSPKSD*
Ga0114129_1179937713300009147Populus RhizosphereLEAVLYLEVTLVNGQNFSIPIEQGHSVERELELFLKREGRFADEWVPLQKAGRELFVRYEQIVLVSPKSD*
Ga0105249_1005090143300009553Switchgrass RhizosphereVYLEVTLLNGQNYSIPVEDGHSVEEELELFLRREGRYAANWVPLQKASRKLFVRYEQIVLVSPID*
Ga0126307_1012040133300009789Serpentine SoilVYLEVTLVNGQNYSIPVEGGHSVEEELELFLRREGRYAADWVPLEKASRKLFVRYEQIILVSPID*
Ga0105071_103495613300009808Groundwater SandLTNGQNFSIPIEKGNSVEQELELFLKREGRYAGEWVPLQKAGRELFVRYEQIVLVSPKSD
Ga0105089_101085323300009809Groundwater SandMYLEVTLTNGQNFSIPIEKGNSVERELELFLKRQGRYAGEWVPLQKAGRDLFVRYEQIVLVSPKSD*
Ga0105067_105214723300009812Groundwater SandVFLEVTLVNGHNYSIPIEEGHSVEQELELFLSREGRYAAEWVPLRKAGRELFVRYEQIVLVSPQTEGG*
Ga0105067_110620413300009812Groundwater SandSARRPTKPMYLEVTLTNGQNFSIPIEKGNSVERELELFLKRQGRYAGEWVPLQKAGRELFVRYEQIVLVSPKSD*
Ga0105082_111270423300009814Groundwater SandPVYLEVTLVNGQNYSIPVQEGHSLDQELELFLSREDRYAADWIPLQKAGRELFVRYEQIVLVSPKS*
Ga0105076_110880413300009816Groundwater SandVYLEVTLTSGQNYSIPIEEGHSVQEELELFLGREGRYGAEWVPLQKAGRELFVRYEQIVLVSPKTD*
Ga0105064_111128613300009821Groundwater SandMYLEVTLMNGQNFSIPIGAGHSVERELELFLKREGRYAGEWVPLQKAGRELFVRYEQIVLVSPKTD*
Ga0126313_1033095833300009840Serpentine SoilVYLEVTLVNGQNYSIPVEGGHSVEEELELFLKREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
Ga0126313_1034989013300009840Serpentine SoilVYLEVTLINGQNYSIPVEKDHSLEQEMELFLNREGRYASEWVPLEKSGRELFVRYEQIVLVSPKT*
Ga0126315_1034223133300010038Serpentine SoilVSIGVYLEVTLVNGQNYSIPLEEGHSLEQELDLFLGREGRYATDWVPLMKSGRELFVRYEQIVLVSPMA*
Ga0126315_1041135613300010038Serpentine SoilVYLEVTLVNGQNYSIPVEEGHSVEEELELFLKREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
Ga0126315_1057396913300010038Serpentine SoilVYLEVTLVNGQNYSIPVEEGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIILVTPMN*
Ga0126312_1057536623300010041Serpentine SoilVYLEVTLVNGQNYSIPVEGGHSVEEELELFLRREGRYAADWVPLEKASRKLFVRYEQIILVSPMD*
Ga0126314_1008843953300010042Serpentine SoilVCLEVTLVNGQNYSIPVEEGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIILVTPMN*
Ga0126310_1007754333300010044Serpentine SoilVYLEVTLVNGQNYSIPVEEGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIILVSPID*
Ga0126311_1030721133300010045Serpentine SoilVYLEVTLVNGQNYSIPVEAGHSVEEELELFLRREGRYAADWVPLEKASRKLFVRYEQIILVSPID*
Ga0126311_1058703613300010045Serpentine SoilVYLEVTLINGQNYSIPVEKDHSLEQEMELFLNREGRYASEWVPPEKSGRELFVRYEQIVLVSPKT*
Ga0126311_1071458413300010045Serpentine SoilVNGQNYSIPVEEGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIILVSPM
Ga0134127_1018921023300010399Terrestrial SoilVYLEVTLLNGQNYSIPVEAGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIVLVSPID*
Ga0138505_10001918823300010999SoilVYLEVTLVNGQNYSIPVEEGHSLEQELNFFLKREGRYATEWVPLMKAGRELFVRYEQIILVSPMG*
Ga0138505_10007180813300010999SoilVYLEVTLLNGQNYSIPVEEGHSVEEELELFLRRDGRYAADWVPLQKASRKLFVRYEQIILVSPID*
Ga0120191_1002320313300012022TerrestrialMRASKTEALVSIGVYLEVTLVNGQNYSIPVEEGHSLDQELDLFLRREGRYATDWVPLMKAGRALFVRYEQIVLVSPMG*
Ga0137374_10000559143300012204Vadose Zone SoilVSLVYLEVTLVNGQNYSIPIEHGHSVEEELEMFLNREGRYAAGWVPLEKAGRQLFVRYDQIVLVSPSGERR*
Ga0137374_1007122223300012204Vadose Zone SoilVNRGGPVYLEVTLVNGQNYSIPVEADHSLEQELELFLNREGRYASPWVPLEKSGRELFVRYEQIVLVSPKT*
Ga0137374_1010474143300012204Vadose Zone SoilVYLEVTLINGQNYSIPVQEGHSLDQELELFLGREGRYTDEWVPLQKAGRDLFVRYEQIILVSPKP*
Ga0137374_1081098713300012204Vadose Zone SoilVYLEVTLINGQNYSIPVQEGHSLDQELELFLAREGRYSGEWVPLQKAGRDLFVRYEQIILVSPKP*
Ga0137374_1108390113300012204Vadose Zone SoilGGPVYLEVTLINGQNYSIPVEKDHSLEQEMELFLNREGRYASEWVPLEKSGRELFVRYEQIVLVSPKT*
Ga0150985_11102509233300012212Avena Fatua RhizosphereVYLEVTLVNGQNYSIPVEEDHSVEEELELFLRREGRYAADWVELQKASRKLFVRYEQIILVSPMD*
Ga0137369_1022612423300012355Vadose Zone SoilVVEAVTARGPVYLEVTLINGQNYSIPIGEGHSLAQELELFLHREGRYASEWVPLEKAGRELFVRYEQIVLVSPKA*
Ga0137371_1053545313300012356Vadose Zone SoilVYLEVTLVNGQNYSIPVQEGHSVDQELELFLAREGRYADEWVPLQKAGRDLFVRYEQIVLVSPKR*
Ga0137368_1036491713300012358Vadose Zone SoilVVEAVTARGPVYLEVTLINGQNYSIPIDEGHSLAQELELFLHREGRYASEWVPLEKAGRELFVRYEQIVLVSPKA*
Ga0137375_1027248213300012360Vadose Zone SoilVYLEVTLINGQNYSIPIDEGHSLAQELELFLHREGRYASEWVPLEKAGRELFVRYEQIVLVSPKA*
Ga0137375_1083698423300012360Vadose Zone SoilVGPVYLEVTLINGQNYSIPIDEGHSLAQELELFLKREGRYASDWVPLEKAGRELFVRYEQIVLVSPKD*
Ga0137375_1144742423300012360Vadose Zone SoilVYLEVTLINGQNYSIPVEEGHSLAQELELFLKREGRYASDWVPLEKAGRELFVRYEQIVLVSPKA*
Ga0150984_11471898923300012469Avena Fatua RhizosphereVYLEVTLVNGQNYSIPVEEDHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
Ga0150984_11859486613300012469Avena Fatua RhizosphereQNYSIPVEGEHSLEQELDLFLRRDGRYAGEWVPLMKAGRELFVRYEQIALVSPVAPN*
Ga0157305_1012170713300012891SoilEVTLVNGQNYSIPVEEGHSVERELDLFLRREGEYAAEWVPLQKAGRKLFVRYEQIALVSPVAD*
Ga0157285_1000957923300012897SoilVYLEVTLVNGQNYSIPVEEGHSVEQELDLFLRREGEYAAEWVPLQKAGRKLFVRYEQIALVSPVAD*
Ga0157285_1001025533300012897SoilVYLEVTLVNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD*
Ga0157283_1011613923300012907SoilEQRGESLGSVAVYLEVTLVNGQNYSIPVEEGHSVEQELDLFLRREGEYAAEWVPLQKAGRKLFVRYEQIALVSPVAD*
Ga0162653_10003242613300012937SoilMYLEVTLVNGQNYSIPVEGGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPID*
Ga0162652_10003315623300012941SoilVYLEVTLINGQNYSIPVEKDHSLEQEMELFLNREGRYGSEWVPLEKSGRELFVRYEQIVLVSPKT*
Ga0157307_102804523300013096SoilVYLEVTLVNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQI
Ga0157378_1307960013300013297Miscanthus RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEQDLELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTG*
Ga0075342_106611813300014320Natural And Restored WetlandsLYLEVTLINGQNFSIPIDMGHSVERELELFLKRDGRYAAEWVPLQKAGRELFVRYEQIVLVSPKSD*
Ga0173478_1041436013300015201SoilVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPMG*
Ga0132257_10058119013300015373Arabidopsis RhizosphereQNYSVPIQDGHSLQQELDLFLNREGRYAGEWVPLQKSGRELFVRYENIVLVSPKTD*
Ga0132255_10126248123300015374Arabidopsis RhizosphereLRRGTVFLEVTLANGQNYSVPIQDGHSLQQELDLFLNREGRYAGEWVPLQKSGRELFVRYENIVLVSPKTD*
Ga0132255_10278847823300015374Arabidopsis RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQIFVRYEQIVLVSPTG*
Ga0184604_1033987523300018000Groundwater SedimentVSLGVYLEVTLVNGQNYSIPVEEGHSLEQELDLFLNREGRYATDWVPLMKAGRELFVRYEQIVLISPMG
Ga0184635_1041027723300018072Groundwater SedimentVYLEVTLLNGQNYSIPVEEGHSVEEELELFLRRDGRYAADWVPLQKASRKLFVRYEQIILVSPID
Ga0190265_1009968443300018422SoilVYLEVTLTNGQNYSIPIEEGHSVEEELELFVKREGRYAAEWVPLQKAGRELYVRYEQIVLVSPKTD
Ga0190265_1093257333300018422SoilVYLEVTLVNGQNFSIPIGNGHSVERELELFLKREGRYADEWVPLQKAGRELFVRYEQIVLVSPKDDG
Ga0190265_1290353113300018422SoilEVTLVNGQNFSIPIGKGHSVEQELELFLKREGRFADEWVPLQKAGRELFVRYEQIVLVSPKND
Ga0190265_1378712013300018422SoilVYLEVTLTSGQNYSIPIEEGHSVEQELELFVKREGRYAAEWVPLQKAGRELFVRYEQI
Ga0190272_1266880013300018429SoilLVYLEVTLVNGQNFSIPIGNGHSVERELELFLKREGRYADEWVPLQKAGRELFVRYEQIVLVSPKGDG
Ga0190275_1006363533300018432SoilVYLEVTLTSGQNYSIPIEEGHSVEQELELFVKREGRYAAEWVPLQKAGRELFVRYEQIVLVSPKTD
Ga0190275_1126280323300018432SoilMYLEVTLTNGQNYSIPIEEGQTVERELELFLTREGRYAAEWVPLQKAGRDLFVRYEQIVLVSPKTD
Ga0190268_1115939023300018466SoilGCSAGSLKLRCVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRKLFVRYEQIVLVSPMG
Ga0190270_1004480243300018469SoilVYLEVTLVNGQNFSIPIEQQHSVERELELFLKREGRYADEWVPLQKAGRELFVRYEQIVLVSPKSD
Ga0190270_1017847923300018469SoilVYLEVTLVNGQNYSIPVEEGHSVERELDLFLKRQGRYAAEWVPLQKAGRKLFVRYEQIALVSPIAD
Ga0190270_1022252023300018469SoilVSLDRLADARGRPVYLEVTLINGQNFSIPIDDGHSVERELELFLGREGRYAAQWVPLQKAGRELFVRYDQIVLVSPKSD
Ga0173481_1003188033300019356SoilVYLEVTLVNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD
Ga0173482_1041554913300019361SoilVYLEVTLVNGQNYSISVEEGHSIEQELDLFLKREGRFASDWVPLMKAGRELFVRYDRVILVSPKT
Ga0173479_1026712813300019362SoilMLRCVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQNVLVSPTGP
Ga0190264_1078647213300019377SoilMYLEVTLTNGQNYSIPIEEGQSVEQELELFLTREGRYAAEWVPLQKAGRDLFVRYEQIVLVSPKTD
Ga0193703_103062523300019876SoilVYLEVTLVNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPID
Ga0193741_100789853300019884SoilVYLEVTLVNGQNFSIPIGNGHSVERELELFLKREGRYADEWVPLQKAGRELFVRYEQIVLVSPKGDA
Ga0196964_1060809813300020202SoilMYLEVTLINGQNYSIPIEEGHSVSEELELFLNREGRYEAGWVPLQKAGRELYVRYEQIVLVSPKTEGS
Ga0222625_125662213300022195Groundwater SedimentVYLEVTLINGQNYSIPVGKDHSLEQEMELFLNREGRYASEWVPLEKSGRELFVRYEQIVLVSPKT
Ga0207647_1018817323300025904Corn RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGS
Ga0207662_1046927323300025918Switchgrass RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGP
Ga0207687_1070511823300025927Miscanthus RhizosphereVYLEVTLLNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVPLQKASRKLFVRYEQIVLVSPID
Ga0207687_1150846313300025927Miscanthus RhizosphereVFLEVTLANGQNYSVPIQDGHSLQQELDLFLNREGRYAGEWVPLQKSGRELFVRYENIVLVSPKTD
Ga0207704_1118822223300025938Miscanthus RhizosphereVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTG
Ga0207661_1013417513300025944Corn RhizosphereLGTEFLEVTLTNGQNYSVPIEEGHSLEEELDLFLKREGRYAGGWVPLQKAGRELFVRYETIILVSPKTS
Ga0207661_1145030513300025944Corn RhizosphereGIGTVFLEVTLANGQNYSVPIQDGHSLQQELDLFLNREGRYAGEWVPLQKSGRELFVRYENIVLVSPKTD
Ga0207661_1146165423300025944Corn RhizosphereGGSRKLRCVYLEVTLLNGQNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGS
Ga0207679_1061681613300025945Corn RhizosphereNYSIPVEEGHSVEEELELFLSRDGRYAGDWVPLQKASRQLFVRYEQIVLVSPTGP
Ga0207675_10021403923300026118Switchgrass RhizosphereVYLEVTLLNGQNYSIPVEDGHSVEEELELFLRREGRYAANWVPLQKASRKLFVRYEQIVLVSPID
Ga0256867_1000671123300026535SoilMYLEVTLTNGQNFSIPIEEEHTVERELELFLKREGRFAGEWVPLQKAGRELFVRYEQIVLVSPKSD
Ga0256867_1001506843300026535SoilMYLEVTLTNGQNFSIPIGAGHTVEQELELFLKREGRFAGEWVPLQKAGRELFVRYEQIVLVSPKSE
Ga0256867_1003076823300026535SoilMYLEVTLTNGQNYSIPIEEGHSVQQELELFVKREGRYAAEWVPLQKAGRELFVRYEQIVLVSPKTE
Ga0256867_1008225323300026535SoilVTLTNGQNYSIPIEEGHSVEQELELFVKREGRYAAEWVPLQKAGRELFVRYEQIVLVSPKTD
Ga0207496_10355023300026785SoilPKLRCVYLEVTLVNGQNYSIPVEDGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD
Ga0209897_101898323300027169Groundwater SandMYLEVTLTNGQNFSIPIEKGNSVERELELFLKRQGRYAGEWVPLQKAGRELFVRYEQIVLVSPKSD
Ga0209845_100866323300027324Groundwater SandVYLEVTLTSGQNYSIPIEEGHSVQEELELFLGREGRYGAEWVPLQKAGRELFVRYEQIVLVSPKTD
Ga0209861_101030623300027332Groundwater SandMYLEVTLTNGQNFSIPIEKGNSVERELELFLKREGRYAGEWVPLQKAGRELFVRYEQIVLVSPKTD
Ga0209854_102567313300027384Groundwater SandPRRARSSILTKSEEQHSARRPTKPMYLEVTLTNGQNFSIPIEKGNSVERELELFLKRQGRYAGEWVPLQKAGRELFVRYEQIVLVSPKSD
Ga0209843_101650133300027511Groundwater SandVTAGRPVYLEVTLVNGQNYSIPVQEGHSLDQELELFLSREDRYAADWIPLQKAGRELFVRYEQIVLVSPKS
Ga0256866_120719513300027650SoilMYLEVTLTNGQNYSIPIEEGQTVEQELELFLTREGRYAAEWVPLQKAGRDLFVRYEQIVLVSPKTD
Ga0209853_106135133300027961Groundwater SandMYLEVTLTNGQNFSIPIEKGNSVEQELELFLKREGRYAGEWVPLQKAGRELFVRYEQIVLVSPKSD
Ga0307303_1010392113300028713SoilVYLEVTLVNGQNYSIPVEEGHSVEEELELFLGREGRYAADWVPLQKASRKLFVRYEQIILVTPMD
Ga0307319_1001239223300028722SoilVSIGVYLEVTLVNGQNYSIPVEGGHSVEQELDLFLKREGRYATEWVPLMKAGRELFVRYEQIVLVSPMG
Ga0307319_1005187823300028722SoilMGAGRRRPKRLVSIGVYLEVTLVNGQNYSIPVEEGHSLEQELDLFLKREGRYATDWVPLMKAGRELFVRYEQIVLVSPME
Ga0307319_1006342013300028722SoilVSIRVYLEVTLVNGQNYSIPVEKGHSVEQELALFLEREGRYATDWVPLMKAGRELFVRYEQIVLVSPMG
Ga0307318_1003309513300028744SoilRRRPKRLVSIGVYLEVTLVNGQNYSIPVEGGHSVEQELDLFLKREGRYATEWVPLMKAGRELFVRYEQIVLVSPMG
Ga0307320_1003832743300028771SoilAGRRRPKRLVSIGVYLEVTLVNGQNYSIPVEGGHSVEQELDLFLKREGRYATEWVPLMKAGRELFVRYEQIVLVSPMG
Ga0307320_1006268043300028771SoilKIRSISVHGVYLEVTLVNGQNYSIPVEKGHSVEQELALFLKREGRYATDWVPLMKAGRELFVRYEQIVLVSPME
Ga0307320_1009822213300028771SoilRRRPKRLVSIRVYLEVTLVNGQNYSIPVEKGHSVEQELALFLEREGRYATDWVPLMKAGRELFVRYEQIVLVSPMG
Ga0307286_1002401433300028876SoilVYLEVTLLNGQNYSIPVEEGHSVEEELELFLRREGRYAADWVQLQKASRKLFVRYEQIILVSPMD
Ga0307286_1003128153300028876SoilVYLEVTLVNGQNYSIPVEKGHSVEQELALFLKREGRYATDWVPLMKAGRELFVRYEQIVLVSPME
Ga0307278_1000060323300028878SoilVVEAVTARGPVYLEVTLINGQNYSIPIGEGHSLAQELELFLHREGRYASEWVPLEMAGRELFVRYEQIVLVSPKA
Ga0299907_1024066713300030006SoilMYLEVTLTNGQNYSIPIEEGHSVEQELELFVKREGRYAAEWVPLQKAGRELFVRYEQIVLVSPKTD
Ga0299907_1032747323300030006SoilLYLEVTLTNGQNFSIPIEEEHTVERELELFLKREGRFAGEWVPLQKAGRELFVRYEQIVLVSPKSD
Ga0247826_1029895843300030336SoilTLTNGQNYSIPIEDEDSVDQELELFLKREGRYAGDWVPLQKAGRELFVRYEQIVLVSPKT
Ga0247826_1127233323300030336SoilWQTPAGDPCILEVTLINGQNFSIPIDDGHSVERELELFLGREGRYAAQWVPLQKARRELFVRYDQIVLVSPKSD
Ga0299906_1095389623300030606SoilVYLEVTLTSGQNYSIPIEEGQTVEQELELFLTREGRYAAEWVPLQKAGRDLFVRYEQIVLVSPKTD
Ga0308204_1002357823300031092SoilVYLEVTLVNGQNYSIPVEKGHSVEQELALFLEREGRYATDWVPLMKAGRELFVRYEQIVLVSPMG
Ga0299914_1065223413300031228SoilMYLEVTLTNGQNFSIPIERANSVDRELELFLKREGRYAGEWVPLQKAGRELFVRYEQILLVSPKSN
Ga0307408_10061648413300031548RhizosphereMGKEDGVVSVCPVYLEVTLLNGQNYSIPVEEGHSIEEELDLFLRRQGRYAAEWVPLKKAGRELFVRYEQIALVSPIA
Ga0307408_10219774213300031548RhizosphereYLEVTLINGQNYSIPVEKDHSLEQEMELFLNREGRYASEWVPLEKSGRELFVRYEQIVLVSPKT
Ga0307405_1121543913300031731RhizosphereVYLEVTLINGQNYSIPVEKDHSLEQEMELFLNREGRYASEWVPLEKSGRELFVRYEQIVLVSPKT
Ga0307468_10124805033300031740Hardwood Forest SoilVFLEVTLTNGQNYSIPIPDGHTLEQELDLFLGREGRYATEWVPLQKAGRELFVRYEQIVLVSPKAEGI
Ga0310904_1023310613300031854SoilLRCVYLEVTLVNGQNYSIPVEGGHSVEEELELFLKREGRYAVDWVQLQKASRKLFVRYEQIILVSPMD
Ga0307406_1049520213300031901RhizosphereAVYLEVTLVNGQNYSIPVEEGHSVERELDLFLKRQGRYAAEWVPLQKAGRKLFVRYEQIALVSPIAD
Ga0307407_1005893313300031903RhizosphereMGKEDGVVSVCPVYLEVTLLNGQNYSIPVEEGHSIEEELDLFLRRQGRYAAEWVPLKKAGRELFVRYEQIALVS
Ga0308175_10006231933300031938SoilVYLEVTLVNGQNYSIPVKEGHSVEQELDLFLRREGEYAAEWVPLQKAGRKLFVRYEQIALVSPVA
Ga0308175_10207559913300031938SoilRTVFLEVTLTNGQNYSVPVEEGHSVEEELDLFLTRQGRYADEWVPLQKAGRKLFVRYERVILVSPKSD
Ga0307416_10330999323300032002RhizosphereVGARPKTEAFSVHGVYLEVTLVNGQNYSIPVEEGHSLEQELELFLKREGRYATDWVPLMKAGRELFVRYEQIVLISPMD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.