Metagenome / Metatranscriptome Family F038345

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038345
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	50 residues
Representative Sequence	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDA
Number of Associated Samples	135
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	94.58 %
% of genes from short scaffolds (< 2000 bps)	83.13 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.747 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.807 % of family members)
Environment Ontology (ENVO)	Unclassified (48.795 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.783 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.16% β-sheet: 0.00% Coil/Unstructured: 43.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF04264	YceI	4.22
PF02371	Transposase_20	3.61
PF01106	NifU	1.20
PF02492	cobW	0.60
PF00374	NiFeSe_Hases	0.60
PF01750	HycI	0.60
PF00753	Lactamase_B	0.60
PF13580	SIS_2	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	4.22
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.61
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	1.20
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	0.60
COG0680	Ni,Fe-hydrogenase maturation factor	Energy production and conversion [C]	0.60
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.75 %
Unclassified	root	N/A	13.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.75 %
Unclassified	root	N/A	13.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.75 %
Unclassified	root	N/A	13.25 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.12 %
Unclassified	root	N/A	13.25 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.71 %
Unclassified	root	N/A	13.25 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	62.05 %
Unclassified	root	N/A	13.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.25 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	11.45 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	6.63 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.61 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.25 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	11.45 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.61 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.25 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	11.45 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.61 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	1.81 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.25 %
Nocardioides ungokensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	11.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.61 %
Amycolatopsis acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis acidiphila	1.81 %
Pseudonocardia nigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	1.81 %
unclassified Microbispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora	1.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.20 %
Amycolatopsis decaplanina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis decaplanina	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.25 %
Nocardioides ungokensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	11.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.61 %
Amycolatopsis acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis acidiphila	1.81 %
Pseudonocardia nigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	1.81 %
Microbispora sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp.	1.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.20 %
Microbispora sp. CSR-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. CSR-4	0.60 %
Amycolatopsis decaplanina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis decaplanina	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001632\|JGI20235J16296_1003697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300001634\|JGI20245J16306_1000486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3077	Open in IMG/M
3300004139\|Ga0058897_11018811	Not Available	605	Open in IMG/M
3300005332\|Ga0066388_100267422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2351	Open in IMG/M
3300005332\|Ga0066388_105236748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300005436\|Ga0070713_100035146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	4032	Open in IMG/M
3300005439\|Ga0070711_101000843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300005471\|Ga0070698_100000603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38616	Open in IMG/M
3300005534\|Ga0070735_10076964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2135	Open in IMG/M
3300005537\|Ga0070730_10643138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300005541\|Ga0070733_11064729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300005554\|Ga0066661_10872982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	526	Open in IMG/M
3300005764\|Ga0066903_107164596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300006028\|Ga0070717_10688222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929	Open in IMG/M
3300006175\|Ga0070712_100125690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1937	Open in IMG/M
3300006176\|Ga0070765_101757856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300006755\|Ga0079222_11437845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp.	641	Open in IMG/M
3300006804\|Ga0079221_11324354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp.	568	Open in IMG/M
3300006806\|Ga0079220_10396249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	899	Open in IMG/M
3300006954\|Ga0079219_10731902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	760	Open in IMG/M
3300009038\|Ga0099829_10109592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2159	Open in IMG/M
3300009089\|Ga0099828_11116513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300009143\|Ga0099792_11272971	Not Available	501	Open in IMG/M
3300009792\|Ga0126374_10868219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300010043\|Ga0126380_10717124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300010359\|Ga0126376_11040826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300010361\|Ga0126378_12356970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	608	Open in IMG/M
3300010366\|Ga0126379_11016982	Not Available	934	Open in IMG/M
3300010366\|Ga0126379_11773149	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300010371\|Ga0134125_11146847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300010376\|Ga0126381_101460046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300010379\|Ga0136449_100579764	Not Available	1919	Open in IMG/M
3300010379\|Ga0136449_100668419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1751	Open in IMG/M
3300011120\|Ga0150983_10900058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300012181\|Ga0153922_1171816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300012200\|Ga0137382_11218034	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012349\|Ga0137387_10000796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	14453	Open in IMG/M
3300012923\|Ga0137359_11167241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300016270\|Ga0182036_10490064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis acidiphila	972	Open in IMG/M
3300016270\|Ga0182036_10771402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	782	Open in IMG/M
3300016294\|Ga0182041_10147530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1810	Open in IMG/M
3300016319\|Ga0182033_10296969	Not Available	1332	Open in IMG/M
3300016357\|Ga0182032_11528665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	580	Open in IMG/M
3300016422\|Ga0182039_11395682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	636	Open in IMG/M
3300017821\|Ga0187812_1080370	Not Available	1075	Open in IMG/M
3300017970\|Ga0187783_10352024	Not Available	1072	Open in IMG/M
3300017974\|Ga0187777_10875693	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300018030\|Ga0187869_10537644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300019887\|Ga0193729_1025043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2558	Open in IMG/M
3300020581\|Ga0210399_10690991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300021171\|Ga0210405_10079905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2578	Open in IMG/M
3300021388\|Ga0213875_10171379	Not Available	1019	Open in IMG/M
3300021402\|Ga0210385_10504842	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300021404\|Ga0210389_10549038	Not Available	909	Open in IMG/M
3300021407\|Ga0210383_10405283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	1176	Open in IMG/M
3300021420\|Ga0210394_10707838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300021474\|Ga0210390_11055950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300021559\|Ga0210409_10584937	Not Available	984	Open in IMG/M
3300021559\|Ga0210409_10915751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300021559\|Ga0210409_11295934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	604	Open in IMG/M
3300022523\|Ga0242663_1109382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	559	Open in IMG/M
3300022528\|Ga0242669_1134639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300022721\|Ga0242666_1161217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300022721\|Ga0242666_1200048	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300022726\|Ga0242654_10397778	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300022732\|Ga0224569_105326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300025906\|Ga0207699_10012290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis decaplanina	4352	Open in IMG/M
3300027080\|Ga0208237_1022622	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300027505\|Ga0209218_1094388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300027565\|Ga0209219_1083232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300027619\|Ga0209330_1066624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	821	Open in IMG/M
3300027826\|Ga0209060_10474880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	568	Open in IMG/M
3300027874\|Ga0209465_10589931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	551	Open in IMG/M
3300027895\|Ga0209624_10341256	Not Available	998	Open in IMG/M
3300028578\|Ga0272482_10011786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2198	Open in IMG/M
3300028877\|Ga0302235_10414416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300029943\|Ga0311340_10202814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1995	Open in IMG/M
3300030602\|Ga0210254_11104992	Not Available	525	Open in IMG/M
3300030622\|Ga0265391_10347152	Not Available	507	Open in IMG/M
3300030741\|Ga0265459_12976099	Not Available	591	Open in IMG/M
3300030743\|Ga0265461_10612681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300030743\|Ga0265461_13986473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	503	Open in IMG/M
3300030906\|Ga0302314_10379484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	1581	Open in IMG/M
3300031543\|Ga0318516_10462911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	729	Open in IMG/M
3300031561\|Ga0318528_10522433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	637	Open in IMG/M
3300031561\|Ga0318528_10580155	All Organisms → cellular organisms → Bacteria → Terrabacteria group	602	Open in IMG/M
3300031564\|Ga0318573_10181507	Not Available	1112	Open in IMG/M
3300031564\|Ga0318573_10423965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300031572\|Ga0318515_10036257	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300031573\|Ga0310915_10615195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	769	Open in IMG/M
3300031640\|Ga0318555_10140085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1292	Open in IMG/M
3300031679\|Ga0318561_10049338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2101	Open in IMG/M
3300031679\|Ga0318561_10074015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1751	Open in IMG/M
3300031680\|Ga0318574_10035623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2547	Open in IMG/M
3300031680\|Ga0318574_10203446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1138	Open in IMG/M
3300031680\|Ga0318574_10400093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300031681\|Ga0318572_10095364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1671	Open in IMG/M
3300031708\|Ga0310686_110714546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	802	Open in IMG/M
3300031713\|Ga0318496_10029188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2777	Open in IMG/M
3300031713\|Ga0318496_10048109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2203	Open in IMG/M
3300031715\|Ga0307476_10444452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300031718\|Ga0307474_10046288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3209	Open in IMG/M
3300031719\|Ga0306917_11014018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300031719\|Ga0306917_11325640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300031723\|Ga0318493_10336196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300031736\|Ga0318501_10207519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis acidiphila	1027	Open in IMG/M
3300031740\|Ga0307468_100317689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis acidiphila	1142	Open in IMG/M
3300031747\|Ga0318502_10937461	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300031748\|Ga0318492_10371756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300031748\|Ga0318492_10586258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300031748\|Ga0318492_10645993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300031751\|Ga0318494_10722550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	583	Open in IMG/M
3300031765\|Ga0318554_10724567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300031769\|Ga0318526_10464431	Not Available	517	Open in IMG/M
3300031771\|Ga0318546_10072390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2204	Open in IMG/M
3300031771\|Ga0318546_10294251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1123	Open in IMG/M
3300031778\|Ga0318498_10026705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2482	Open in IMG/M
3300031778\|Ga0318498_10475095	All Organisms → cellular organisms → Bacteria → Terrabacteria group	552	Open in IMG/M
3300031780\|Ga0318508_1123157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300031781\|Ga0318547_10401165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	842	Open in IMG/M
3300031795\|Ga0318557_10417031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300031796\|Ga0318576_10336846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	713	Open in IMG/M
3300031797\|Ga0318550_10048602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1899	Open in IMG/M
3300031799\|Ga0318565_10277816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300031799\|Ga0318565_10558930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300031819\|Ga0318568_11018065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300031831\|Ga0318564_10018124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2896	Open in IMG/M
3300031832\|Ga0318499_10238367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300031833\|Ga0310917_10516564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812	Open in IMG/M
3300031859\|Ga0318527_10097248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1205	Open in IMG/M
3300031890\|Ga0306925_10340075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1612	Open in IMG/M
3300031890\|Ga0306925_11652994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	620	Open in IMG/M
3300031894\|Ga0318522_10003431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4230	Open in IMG/M
3300031897\|Ga0318520_10575980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	699	Open in IMG/M
3300031941\|Ga0310912_10532553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300031942\|Ga0310916_10300435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1359	Open in IMG/M
3300031947\|Ga0310909_10359873	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300031954\|Ga0306926_10620085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300031959\|Ga0318530_10153585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300031962\|Ga0307479_10909908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	852	Open in IMG/M
3300032001\|Ga0306922_10157510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2430	Open in IMG/M
3300032001\|Ga0306922_11058010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	834	Open in IMG/M
3300032009\|Ga0318563_10203815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. CSR-4	1067	Open in IMG/M
3300032009\|Ga0318563_10596234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300032025\|Ga0318507_10125216	Not Available	1087	Open in IMG/M
3300032039\|Ga0318559_10528952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300032043\|Ga0318556_10161369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300032043\|Ga0318556_10214533	Not Available	1002	Open in IMG/M
3300032043\|Ga0318556_10737077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300032060\|Ga0318505_10530891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300032065\|Ga0318513_10017451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2945	Open in IMG/M
3300032066\|Ga0318514_10098271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1481	Open in IMG/M
3300032076\|Ga0306924_10242252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2071	Open in IMG/M
3300032090\|Ga0318518_10051586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1958	Open in IMG/M
3300032090\|Ga0318518_10333019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300032090\|Ga0318518_10360191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis	747	Open in IMG/M
3300032091\|Ga0318577_10408475	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300032091\|Ga0318577_10426737	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300032160\|Ga0311301_10491760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1824	Open in IMG/M
3300032261\|Ga0306920_101085599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	1161	Open in IMG/M
3300032261\|Ga0306920_101861015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300032515\|Ga0348332_11572612	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.19%
Host-Associated	Host-Associated	1.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.99%
Aquatic	Environmental → Aquatic	1.20%
Plants	Host-Associated → Plants	1.20%
Fungi	Host-Associated → Fungi	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.58%
Peat	Environmental → Terrestrial → Peat	1.81%
Freshwater	Environmental → Aquatic → Freshwater	1.20%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.60%
Roots	Host-Associated → Plants → Roots	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.60%
Mycelium	Host-Associated → Fungi → Mycelium	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.33%
Loam	Environmental → Terrestrial → Soil → Loam	12.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.20%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.60%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.60%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.60%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.20%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.20%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.60%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.60%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.60%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001632	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001	Environmental	Open in IMG/M
3300001634	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030602	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20235J16296_10036973	3300001632	Forest Soil	METIVGFVAGYLVGTREGRDGLERLRSSWHSIRTSPEVRKLAGDAITLAESVVRQRSGSASIGGAVGN
JGI20245J16306_10004865	3300001634	Forest Soil	METIVGFVAGYLVGTREGRDGLERLRSSWHSIRTSPEVRKLAGDAITLAESVVRQRSGSA
Ga0058897_110188112	3300004139	Forest Soil	METIIGFVVGYLVGAREGKDGVERLKTSVSSIIGSAEARRMLA
Ga0066388_1002674223	3300005332	Tropical Forest Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAIASSPEVRKMASDAMAMA
Ga0066388_1052367482	3300005332	Tropical Forest Soil	METIVGFVAGYLVGTREGRDGVERLRSSFNSIRNSPEVRKLASEAVTV
Ga0070713_1000351465	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	METIIGFVAGYLVGSREGRAGLERLKTSWQTIRSSPEVRKLATDA
Ga0070711_1010008431	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	METILGFVAGFLVGTREGRDGLNRLRTSWHSIRTSPEVRKLAGEAVAVAEIVVRRATSGGLGEAASG
Ga0070698_10000060322	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	METIIGFVAGYLAGSREGRAGLDRLRTSWHAIRTSPEVRKLASEAG*
Ga0070735_100769644	3300005534	Surface Soil	METIVGFVAGYLVGVREGREGLERLRSSWKAIRTSPEVR
Ga0070730_106431381	3300005537	Surface Soil	METIIGFVAGYLAGAREGKAGLERLKTSWQAISSSPEVRKMASDAIV
Ga0070733_110647291	3300005541	Surface Soil	METIIGFLAGYLVGSREGKAGLERLKTSVNAIRSSPEVHKMAA
Ga0066661_108729821	3300005554	Soil	METIIGFVAGYLVGAHEGKAGLERLKTSWRAITSSPEVRKMASDA
Ga0066903_1071645963	3300005764	Tropical Forest Soil	METIIGFVAGYLVGSREGKAGLERLKTSWRAITSSPEVRKMASDAMVMAEQVVRRAPAGA
Ga0070717_106882221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	METILGFVAGFLVGTREGRDGLNRLRTSWHSIRTSPEVRKLAGEAVAVAEIVVRRATSGGLG
Ga0070712_1001256901	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	METILGFVAGFLVGTREGRDGLNRLRTSWHSIRTSPEVRKLAGEAVAVAEIVVRRATSGG
Ga0070765_1017578563	3300006176	Soil	METIIGFVAGYLVGSRGGKAGLERLKTSVNAIRSSPEVRKMAS
Ga0079222_114378451	3300006755	Agricultural Soil	METIIGFVVGYLVGAREGKDGVERLKTSVSSIIGSAEARRM
Ga0079221_113243541	3300006804	Agricultural Soil	METIIGFVVGYLVGAREGKDGVERLKTSVSSIIGSAEARRMLAEAMAVAE
Ga0079220_103962493	3300006806	Agricultural Soil	METIIGFVAGYLVGTREGKAGLERLKASWRGISSSPEVRKMAS
Ga0079219_107319021	3300006954	Agricultural Soil	METIIGFVVGYLVGAREGKDGVERLKTSVSSIIGSAEARRMLAEAVAV
Ga0099829_101095925	3300009038	Vadose Zone Soil	METIIGFAAGYLTGSREGRAGLERLRTSWRAIITSPEVRKLAS
Ga0099828_111165131	3300009089	Vadose Zone Soil	VAGYLVGTREGKAGLERLKTSWQAITASPEVRKMASDAMV
Ga0099792_112729711	3300009143	Vadose Zone Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVHKMASDAMVLAGQMVRRVPAGAIT
Ga0126374_108682191	3300009792	Tropical Forest Soil	METIIGFVAGYLVGSREGKAGLERLKTSWNAIRSSPEVRKLAADAITM
Ga0126380_107171241	3300010043	Tropical Forest Soil	METIIGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASD
Ga0126376_110408261	3300010359	Tropical Forest Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEV
Ga0126378_123569701	3300010361	Tropical Forest Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDAMVLAEQVVRRAP
Ga0126379_110169823	3300010366	Tropical Forest Soil	METIIGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQV
Ga0126379_117731491	3300010366	Tropical Forest Soil	METIIGFLAGYLVGAREGKAGMERLKASVNAIRSSPEVRRMASDAMVLAEQVVRRAPGGGIS
Ga0134125_111468471	3300010371	Terrestrial Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVRKMASDAMVLAEQVVR
Ga0126381_1014600461	3300010376	Tropical Forest Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDAMVLAEQVVRRAPVGGISGTVV
Ga0136449_1005797641	3300010379	Peatlands Soil	METIVGFVAGYLVGTQQGREGLDRLRSSWNSIRTSP
Ga0136449_1006684191	3300010379	Peatlands Soil	METIVGFVAGYLVGSREGKAALDRARTSLDAIKNSPEA
Ga0150983_109000583	3300011120	Forest Soil	METILGFVAGYLVGTRDGKDGLERMRSSLHSIRTSPEVRKLAADAI
Ga0153922_11718163	3300012181	Attine Ant Fungus Gardens	METIIGFVVGYLVGSREGKAGLERLRTSANAIMRSP
Ga0137382_112180343	3300012200	Vadose Zone Soil	METIIGFVAGYLVGTREGKAGLERLKASWRGITSSPEVRKMASDAIVMAEQIVKRVPAAQLLPA
Ga0137387_1000079619	3300012349	Vadose Zone Soil	METIIGFVAGYLVGAREGKAGLERLKTSWRAITSSPEVRKMAS
Ga0137359_111672411	3300012923	Vadose Zone Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIMSSPEVHKM
Ga0182036_104900643	3300016270	Soil	MEAIIGFVAGYLIGSREGKAGLERLKTSWQTIRSSPEVRKLA
Ga0182036_107714023	3300016270	Soil	METIIGFVAGYLVGSREGKAGLERLKTSWQTIRRSPEVRKLAVDAITMAEQIVR
Ga0182041_101475301	3300016294	Soil	LGSWPGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASD
Ga0182033_102969691	3300016319	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRK
Ga0182032_115286653	3300016357	Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVRKMA
Ga0182039_113956821	3300016422	Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVRK
Ga0187812_10803701	3300017821	Freshwater Sediment	METIVGFVAGYLVGTRDGRDGLDRLRSSWKAIRTSPEVRKLATESVSVA
Ga0187783_103520241	3300017970	Tropical Peatland	METVIGFVAGYLVGAGDGKDGLARVRSSLRSIWHSPEARRLAAEA
Ga0187777_108756933	3300017974	Tropical Peatland	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRRLAGEAVSMAEMAVRQVSGRGSLGGTVGD
Ga0187869_105376443	3300018030	Peatland	VETIIGFIVGYLVGSREGKEGIERLRTSANAIAHSPEVRRLTAQAITIAESATKE
Ga0193729_10250431	3300019887	Soil	METIVGFVAGYLVGTRGGRDGLARLRSSWHSIRTSP
Ga0210399_106909913	3300020581	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAGE
Ga0210405_100799051	3300021171	Soil	METIIGFLAGYLVGSREGKAGLERLKTSVNAIRSSPEVHKMAADAL
Ga0213875_101713793	3300021388	Plant Roots	METIVGFVAGYLVGTREGRDGLERMRSSWRSIRTSPEVRRLAADAISLAEAAMRQRSSRASIGGAVGN
Ga0210385_105048421	3300021402	Soil	METIVGFVAGYLVGTREGRDGLERLRSSWHSIRTSPEVRKLAGDAITL
Ga0210389_105490383	3300021404	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMA
Ga0210383_104052833	3300021407	Soil	METIIGFLAGYLVGAREGKDGLERLKTSVNAIRSSPEVHKMASDALVLAEQMVKRVPVGGISGAV
Ga0210394_107078383	3300021420	Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVRKMAADALVMAEQVVKRVPAGGLSGTV
Ga0210391_113720422	3300021433	Soil	METIVGFVAGYLVGTSAGKAGLKRLQESWQASSTSPHVREMAADALSVAAPAAR
Ga0210390_110559503	3300021474	Soil	METIVGFVAGYLVGTREGKDGLERMRSSWHSIRTSPEVRKLAADAITLVEGVVR
Ga0210409_105849373	3300021559	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMAADALVMAEQ
Ga0210409_109157511	3300021559	Soil	METIIGFLAGYLVGAREGKAGLERLKTSVKAIRSSSEVRKMA
Ga0210409_112959343	3300021559	Soil	METIIGFVAGYLVGSRGGKAGLERLKTSVNAIRSSPEVRKMASDAMVLAEQMV
Ga0242663_11093823	3300022523	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMAADALVMAEQVVKRVPA
Ga0242669_11346393	3300022528	Soil	METILGFVAGYLVGTRDGKDGLERMRSSLHSIRTSPEVRKLA
Ga0242666_11612171	3300022721	Soil	METIVGFVAGYLVGTRDGKDGLERMRSSWHSIRTSPEVRKLAGDAITLAESVVRQ
Ga0242666_12000483	3300022721	Soil	METIIGFVAGYLVGANGGPDGLKRVRSSWQAIRTSPEVRRLLS
Ga0242654_103977783	3300022726	Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVRKMASNAIV
Ga0224569_1053261	3300022732	Rhizosphere	METILGFVAGYLVGTRDGKDGLERMRSSLHSIRTSPEVR
Ga0207699_100122901	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	METILGFVAGFLVGTREGRDGLNRLRTSWHSIRTSPEVRKLAGEAVAVAEIVVRR
Ga0208237_10226221	3300027080	Forest Soil	METIVGFVAGYLVGTREGRDGLERLRSSWHSIRTSPEVRKLAGDAITLAESV
Ga0209218_10943883	3300027505	Forest Soil	METIVGFVAGYLVGVREGRDGLERLRSSWNSIRTSPEVRRLAGEAMTAAEMVVRRGSGRGNLS
Ga0209219_10832321	3300027565	Forest Soil	METIIGFVAGYLVGVNSGRDGLERARSSWRSIRTSPEVRRLVSEGAVM
Ga0209330_10666243	3300027619	Forest Soil	METIVGFVAGYLVGVREGRDGLERLRSSWNSIRTSPEVRRLAGEAMTA
Ga0209060_104748801	3300027826	Surface Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMAFDAIVL
Ga0209465_105899313	3300027874	Tropical Forest Soil	METIIGFVAGYLVGSREGKAGLERLKTSWRAITSSPEVRKMASDAMVMA
Ga0209624_103412563	3300027895	Forest Soil	METILGFVAGYLVGTRDGKDGVERMRSSLHSIRTSP
Ga0272482_100117861	3300028578	Soil	METLVGFMVGYLVGTRQGRDGMRRTRESFDAIRTSPEVRQLVTTGAAI
Ga0302235_104144163	3300028877	Palsa	MEAIIGFVAGYLVGSREGKAGLDRLRTSWQAIRTSPEVRRLAGEAAVIAEATVRRAA
Ga0311340_102028141	3300029943	Palsa	METIIGFVAGYLVGATGGPDGLKRVRSSWESIRTSPEVR
Ga0210254_111049923	3300030602	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMAADALVMAEQVVKRAPVGGISG
Ga0265391_103471521	3300030622	Soil	METIIGFLAGYLVGSREGKVGLERLKTSVNAIRSSPEVHKMAADALVMAEQL
Ga0265459_129760993	3300030741	Soil	METIIGFLAGYLVGSREGKVGLERLKTSVNAIRSSPEVHKMAADALVMAEQLVKRAPVGGISGKKKIDV
Ga0265461_106126813	3300030743	Soil	METILGFVAGYLVGTRDGKDGLERMRSSWHSIRTSPEVRKLAADAITLVEGAMRQRSGRAGIGGAVGN
Ga0265461_139864731	3300030743	Soil	METIVGFVAGYLVGTREGKDGLERMRSSWHSIRTSPEVRKLAADA
Ga0302314_103794841	3300030906	Palsa	VETIVGFVIGYLVGVREGPDGLDRMRTSARSIRESQELRE
Ga0318516_104629113	3300031543	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWRSIRTSPEVRKLVGEAVTMAEMAV
Ga0318528_105224333	3300031561	Soil	METIIGFVAGYLVGSREGKTGLERLKTSWHAIRSSPEVRKMATDAITMAEQVA
Ga0318528_105801553	3300031561	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAE
Ga0318573_101815073	3300031564	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDAMVLAEQVVRRAPVGG
Ga0318573_104239651	3300031564	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVVKRAPAG
Ga0318515_100362571	3300031572	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMA
Ga0310915_106151953	3300031573	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAERVVKRVPAGGISGA
Ga0318555_101400851	3300031640	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVVKR
Ga0318561_100493384	3300031679	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDA
Ga0318561_100740151	3300031679	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAAEAVTVAEMAVRQVSGRGGPACP
Ga0318574_100356234	3300031680	Soil	METILGFVAGYLVGSREGKAGLERLKTSWHAIRNSPEVRKMATDAISMAEQVVRQAPIGGISG
Ga0318574_102034463	3300031680	Soil	METIVGFVAGYLLGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVVKRVPAG
Ga0318574_104000933	3300031680	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVLG
Ga0318572_100953641	3300031681	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSS
Ga0310686_1107145461	3300031708	Soil	MEAVIGFVVGYLAGSRDGRAGLERLRTSWHAIRTSPEVRKLAAEAAVIAEATVRQAAGGG
Ga0318496_100291881	3300031713	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRK
Ga0318496_100481091	3300031713	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVVKRAPAGRVQRQ
Ga0307476_104444523	3300031715	Hardwood Forest Soil	MEAIIGFVVGYLVGTREGKTGLERLKTSWQAIVTSPEARKMA
Ga0307474_100462885	3300031718	Hardwood Forest Soil	METIVGFVAGYLVGAREGRDGLERLRSSWHAIRTSPEVRKLASEAMTVAEMAVRRSSGRANIGGT
Ga0306917_110140183	3300031719	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAA
Ga0306917_113256401	3300031719	Soil	METIVGFVASYLVGSREGKAGLERLKTSWGAITSPPEVRKMAS
Ga0318493_103361963	3300031723	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVV
Ga0318501_102075191	3300031736	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVLGEQM
Ga0307468_1003176892	3300031740	Hardwood Forest Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVR
Ga0318502_109374611	3300031747	Soil	MEAIIGFVAGYLVGTREGKAGLERLKTSWHAIRNSP
Ga0318492_103717563	3300031748	Soil	METIIGFVAGYLVGSREGKTGLERLKTSWHAIRSSPEVRKMATDAITMAE
Ga0318492_105862582	3300031748	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRK
Ga0318492_106459931	3300031748	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWRSIRTSPEVRKLVGEAVTMAEMAVRQVSGHG
Ga0318494_107225503	3300031751	Soil	MEAIIGFVAGYLVGTREGKAGLERLKTSWHAIRTSPEVRK
Ga0318554_107245671	3300031765	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAAEAVTMAEMAVRQVSGRGSLGGLSGAR
Ga0318526_104644313	3300031769	Soil	METIIGFLAGYLVGAREGKAGLERLKASVNAIRSSPEVRRMASDAIVMAEQVVRRAPVGGIS
Ga0318546_100723904	3300031771	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVVK
Ga0318546_102942513	3300031771	Soil	METILGFVAGYLVGSREGKAGLERLKTSWHAIRSSPEVRKMATDAITMAEQVARRAPVGG
Ga0318498_100267054	3300031778	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVLGEQMVKRAPVGG
Ga0318498_104750953	3300031778	Soil	METIIGFVAGYLIGSREGKAGLERLKTSWQTIRSSPEVRKLAVDAITVAEQVVRRAPVGS
Ga0318508_11231571	3300031780	Soil	METIIGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAERVVKR
Ga0318547_104011651	3300031781	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAAEAVTMAEMAV
Ga0318557_104170313	3300031795	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAAEAVTVAEMAVRQVSGRGSLGGAVSD
Ga0318576_103368461	3300031796	Soil	MEAIIGFVAGYLVGTREGKAGLERLKTSWHAIRNSPEVRKMATDAISMAEQVV
Ga0318550_100486024	3300031797	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPE
Ga0318565_102778161	3300031799	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAAEAVTMAEMAVRQVSG
Ga0318565_105589303	3300031799	Soil	MEAIIGFVAGYLVGTREGKAGLERLKTSWHAIRNSPEVRKMATDAISMAEQVVRQAPIG
Ga0318568_110180651	3300031819	Soil	METIIGFVAGYLVGTREGKDGLERLKTSWRAITSSPEVRK
Ga0318564_100181245	3300031831	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVR
Ga0318499_102383671	3300031832	Soil	MEAIIGFVAGYLVGTREGKAGLERLKTSWHAIRTSPEVRKLATDAISMAEQVVRQAPIGG
Ga0318499_104107501	3300031832	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIV
Ga0310917_105165641	3300031833	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVLGEQ
Ga0318512_100258304	3300031846	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAI
Ga0318527_100972481	3300031859	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDEMVLAEQVVR
Ga0306925_103400751	3300031890	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMA
Ga0306925_116529943	3300031890	Soil	METFIGFIAGYLVGSREGKAGLERLKTSWNAIRTSPEVRKLAGDAV
Ga0318522_100034313	3300031894	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVLGEQMVKRAPGGVAGGLTPARHRGRRP
Ga0318520_105759803	3300031897	Soil	METIIGFVAGYLIGSREGKAGLERLKTSWQTIRSSPEV
Ga0310912_105325533	3300031941	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPE
Ga0310916_103004352	3300031942	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPE
Ga0310909_103598731	3300031947	Soil	METIVGFVAGYLVGSREGKAGLERLKTSWGAITSSPEVRKMASDAIVMAEQVVERA
Ga0306926_106200853	3300031954	Soil	METIVGFVAGYLLGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVVKRVSAGG
Ga0318530_101535853	3300031959	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAAEAVTMAEMAVRQVSGRGSLGGLGGA
Ga0307479_109099081	3300031962	Hardwood Forest Soil	METIIGFVAGYLVGSREGKTGLERLKTSWHAIRNSPEVRKMAADAI
Ga0306922_101575105	3300032001	Soil	METIVGFVAGYLVGSREGKAGLERLKTSWGAITSSPEV
Ga0306922_110580101	3300032001	Soil	METIIGFLAGYLVGAREGKAGLERLKTSVNAIRSSPEVRKMASDAIVLAEQMVRRAPVGG
Ga0318563_102038151	3300032009	Soil	METILGFVAGYLVGSREGKAGLERLKTSWHAILRTSGE
Ga0318563_105962341	3300032009	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLA
Ga0318507_101252163	3300032025	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDAIVLAEQMV
Ga0318559_104935943	3300032039	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVL
Ga0318559_105289523	3300032039	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWRSIRTSPE
Ga0318556_101613693	3300032043	Soil	METIVGFVAGYLVGTREGKDGLDRLRSSWHSIRTSPEVRKLAAEAVTVAEMAVRQVSG
Ga0318556_102145331	3300032043	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDVIVMA
Ga0318556_107370773	3300032043	Soil	METIIGFVAGYLVGTREGKDGLERLKTSWRAITSSPEVRKMASDAMI
Ga0318505_105308911	3300032060	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDVIVMAE
Ga0318513_100174511	3300032065	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDAIVLAEQMVRR
Ga0318514_100982713	3300032066	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDAMV
Ga0306924_102422521	3300032076	Soil	METIIGFVAGYLVGSREGKAGLERLKTSWQTIRNSPEVRKLAVDAITMAEQVVRRAPVGGISGA
Ga0318518_100515861	3300032090	Soil	METIIGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAERVVKRVP
Ga0318518_103330192	3300032090	Soil	METIVGFVAGYLLGTREGKAGLERLKTSWRAITSSPEVRKMASDAIVMAEQVVKRVPAGGISGTV
Ga0318518_103601911	3300032090	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVLGEQMVKRAPVGGISGSV
Ga0318577_104084751	3300032091	Soil	METIIGFLAGYLVGTREGKAGLERLKTSVNAIRSSPEVRKMASDAMVLAEQVVRRAPVGGISGAV
Ga0318577_104267373	3300032091	Soil	METIIGFVAGYLAGSREGKAGLERLKTSWQAIISSPEVRKMASDAIVLGEQMVKR
Ga0311301_104917601	3300032160	Peatlands Soil	METIVGFVAGYLVGTQQGREGLDRVRSSWNSIRTSP
Ga0306920_1010855991	3300032261	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSPEVRKMASD
Ga0306920_1018610151	3300032261	Soil	METIVGFVAGYLVGTREGKAGLERLKTSWRAITSSP
Ga0348332_115726123	3300032515	Plant Litter	METIIGFVAGYLVGSREGKAGLERLRTSWHAIRTSPDVRRLATDAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038345

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences