Metagenome / Metatranscriptome Family F034973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	45 residues
Representative Sequence	MKSGKPKKAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK
Number of Associated Samples	132
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	31.71 %
% of genes near scaffold ends (potentially truncated)	43.93 %
% of genes from short scaffolds (< 2000 bps)	67.05 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.647 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (16.763 % of family members)
Environment Ontology (ENVO)	Unclassified (43.931 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (52.601 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.81% β-sheet: 0.00% Coil/Unstructured: 89.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF00535	Glycos_transf_2	21.97
PF05853	BKACE	4.62
PF08241	Methyltransf_11	3.47
PF13392	HNH_3	2.31
PF02945	Endonuclease_7	2.31
PF00154	RecA	2.31
PF05050	Methyltransf_21	1.16
PF01844	HNH	1.16
PF00692	dUTPase	1.16
PF02434	Fringe	1.16
PF13489	Methyltransf_23	1.16
PF00565	SNase	0.58
PF00132	Hexapep	0.58
PF13479	AAA_24	0.58
PF01391	Collagen	0.58
PF08291	Peptidase_M15_3	0.58
PF01531	Glyco_transf_11	0.58
PF06067	DUF932	0.58
PF00271	Helicase_C	0.58
PF01041	DegT_DnrJ_EryC1	0.58
PF00386	C1q	0.58
PF00534	Glycos_transf_1	0.58
PF01541	GIY-YIG	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	4.62
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	2.31
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	1.16
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	1.16
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.58
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.58
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.58
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.58
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.58
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
All Organisms	root	All Organisms	43.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
cellular organisms	root	All Organisms → cellular organisms	21.97 %
Viruses	superkingdom	All Organisms → Viruses	21.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.97 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	9.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.51 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	9.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.62 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.16 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	1.16 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.16 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	9.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.51 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.73 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	1.16 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.16 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	1.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.73 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.16 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.16 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.16 %
Candidatus Absconditabacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Absconditabacteria	0.58 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	8.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.89 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.16 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.16 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.16 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.16 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.58 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.58 %
Vampirococcus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Absconditabacteria → Vampirococcus	0.58 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.89 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.16 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.16 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.16 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.16 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.58 %
Candidatus Vampirococcus lugosii	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Absconditabacteria → Vampirococcus → Candidatus Vampirococcus lugosii	0.58 %
Synechococcus phage S-H34	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H34	0.58 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.65 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.89 %
Spirosomaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	1.16 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.16 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.16 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.16 %
Azospirillum cavernae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum cavernae	0.58 %
Candidatus Vampirococcus lugosii	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Absconditabacteria → Vampirococcus → Candidatus Vampirococcus lugosii	0.58 %
Synechococcus phage S-H34	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H34	0.58 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100638284	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300001282\|B570J14230_10147770	Not Available	673	Open in IMG/M
3300001850\|RCM37_1110553	Not Available	626	Open in IMG/M
3300001850\|RCM37_1141317	All Organisms → cellular organisms → Bacteria → Proteobacteria	1005	Open in IMG/M
3300001968\|GOS2236_1042343	All Organisms → Viruses	1650	Open in IMG/M
3300002092\|JGI24218J26658_1015662	Not Available	1119	Open in IMG/M
3300002161\|JGI24766J26685_10136543	Not Available	516	Open in IMG/M
3300002408\|B570J29032_109352286	Not Available	707	Open in IMG/M
3300002476\|metazooDRAFT_10900914	Not Available	1219	Open in IMG/M
3300003413\|JGI25922J50271_10027257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1387	Open in IMG/M
3300003497\|JGI25925J51416_10098625	Not Available	700	Open in IMG/M
3300003808\|Ga0007844_1000006	All Organisms → cellular organisms → Bacteria	23952	Open in IMG/M
3300003827\|Ga0007880_1018800	Not Available	619	Open in IMG/M
3300003852\|Ga0031655_10002396	Not Available	10836	Open in IMG/M
3300003860\|Ga0031658_1071675	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300004154\|Ga0066603_10565684	Not Available	537	Open in IMG/M
3300004240\|Ga0007787_10060563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1709	Open in IMG/M
3300004795\|Ga0007756_11501626	Not Available	830	Open in IMG/M
3300005527\|Ga0068876_10011533	Not Available	5797	Open in IMG/M
3300005527\|Ga0068876_10015038	All Organisms → cellular organisms → Bacteria → FCB group	4980	Open in IMG/M
3300005527\|Ga0068876_10061868	All Organisms → Viruses → Predicted Viral	2267	Open in IMG/M
3300005527\|Ga0068876_10078107	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300005527\|Ga0068876_10152456	All Organisms → Viruses → Predicted Viral	1358	Open in IMG/M
3300005527\|Ga0068876_10183567	All Organisms → cellular organisms → Bacteria → FCB group	1219	Open in IMG/M
3300005527\|Ga0068876_10221582	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1092	Open in IMG/M
3300005527\|Ga0068876_10273859	Not Available	963	Open in IMG/M
3300005527\|Ga0068876_10352849	All Organisms → Viruses	827	Open in IMG/M
3300005528\|Ga0068872_10650229	Not Available	556	Open in IMG/M
3300005662\|Ga0078894_10580654	Not Available	1000	Open in IMG/M
3300005739\|Ga0076948_1100632	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1153	Open in IMG/M
3300005758\|Ga0078117_1028443	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005758\|Ga0078117_1082741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1395	Open in IMG/M
3300005805\|Ga0079957_1001422	Not Available	22162	Open in IMG/M
3300005805\|Ga0079957_1012875	Not Available	6204	Open in IMG/M
3300005805\|Ga0079957_1159692	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300005844\|Ga0068862_100056046	All Organisms → cellular organisms → Bacteria	3376	Open in IMG/M
3300005940\|Ga0073913_10014635	Not Available	1090	Open in IMG/M
3300006115\|Ga0007816_1048266	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	963	Open in IMG/M
3300006224\|Ga0079037_102340161	Not Available	533	Open in IMG/M
3300006641\|Ga0075471_10533721	Not Available	580	Open in IMG/M
3300006641\|Ga0075471_10582949	Not Available	550	Open in IMG/M
3300006802\|Ga0070749_10067084	Not Available	2156	Open in IMG/M
3300006805\|Ga0075464_10782360	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	593	Open in IMG/M
3300006917\|Ga0075472_10035612	Not Available	2329	Open in IMG/M
3300007169\|Ga0102976_1008876	All Organisms → cellular organisms → Bacteria	4207	Open in IMG/M
3300007171\|Ga0102977_1001802	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300007561\|Ga0102914_1138416	Not Available	754	Open in IMG/M
3300007658\|Ga0102898_1017858	Not Available	1576	Open in IMG/M
3300007670\|Ga0102862_1103285	Not Available	715	Open in IMG/M
3300008107\|Ga0114340_1090677	Not Available	1242	Open in IMG/M
3300008108\|Ga0114341_10010090	Not Available	8383	Open in IMG/M
3300008108\|Ga0114341_10020372	Not Available	7199	Open in IMG/M
3300008108\|Ga0114341_10328317	Not Available	780	Open in IMG/M
3300008116\|Ga0114350_1033435	Not Available	4787	Open in IMG/M
3300008117\|Ga0114351_1001368	Not Available	49155	Open in IMG/M
3300008120\|Ga0114355_1039398	Not Available	2257	Open in IMG/M
3300008120\|Ga0114355_1170676	Not Available	743	Open in IMG/M
3300008259\|Ga0114841_1153721	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	906	Open in IMG/M
3300008266\|Ga0114363_1075536	All Organisms → Viruses → Predicted Viral	2615	Open in IMG/M
3300008267\|Ga0114364_1002831	Not Available	12666	Open in IMG/M
3300008448\|Ga0114876_1128698	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	958	Open in IMG/M
3300008448\|Ga0114876_1140156	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	897	Open in IMG/M
3300008448\|Ga0114876_1229401	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300008450\|Ga0114880_1068134	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H34	1452	Open in IMG/M
3300009026\|Ga0102829_1023329	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1778	Open in IMG/M
3300009059\|Ga0102830_1050137	Not Available	1266	Open in IMG/M
3300009081\|Ga0105098_10001375	Not Available	8704	Open in IMG/M
3300009081\|Ga0105098_10828668	Not Available	502	Open in IMG/M
3300009165\|Ga0105102_10114864	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1278	Open in IMG/M
3300009165\|Ga0105102_10529335	Not Available	643	Open in IMG/M
3300009170\|Ga0105096_10042303	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300009170\|Ga0105096_10103643	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1420	Open in IMG/M
3300009170\|Ga0105096_10216155	Not Available	971	Open in IMG/M
3300009170\|Ga0105096_10360667	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300009684\|Ga0114958_10077853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1733	Open in IMG/M
3300012352\|Ga0157138_1000189	All Organisms → cellular organisms → Bacteria	15362	Open in IMG/M
3300012968\|Ga0129337_1317289	Not Available	597	Open in IMG/M
3300013004\|Ga0164293_10120679	Not Available	1985	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10766956	Not Available	602	Open in IMG/M
3300017747\|Ga0181352_1070271	Not Available	990	Open in IMG/M
3300017754\|Ga0181344_1009028	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3244	Open in IMG/M
3300017754\|Ga0181344_1086758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	916	Open in IMG/M
3300017754\|Ga0181344_1186115	Not Available	585	Open in IMG/M
3300017754\|Ga0181344_1239372	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300017766\|Ga0181343_1218166	Not Available	519	Open in IMG/M
3300017788\|Ga0169931_10426304	All Organisms → Viruses	968	Open in IMG/M
3300019784\|Ga0181359_1118244	All Organisms → Viruses	951	Open in IMG/M
3300020048\|Ga0207193_1022051	Not Available	7880	Open in IMG/M
3300020151\|Ga0211736_10948161	All Organisms → Viruses → Predicted Viral	1683	Open in IMG/M
3300020162\|Ga0211735_11154321	Not Available	3080	Open in IMG/M
3300020540\|Ga0208227_1020288	Not Available	1067	Open in IMG/M
3300020543\|Ga0208089_1001566	Not Available	5331	Open in IMG/M
3300020551\|Ga0208360_1014727	Not Available	1076	Open in IMG/M
3300021079\|Ga0194055_10000954	Not Available	23512	Open in IMG/M
3300021142\|Ga0214192_1033679	Not Available	1701	Open in IMG/M
3300021354\|Ga0194047_10000049	Not Available	89898	Open in IMG/M
3300021438\|Ga0213920_1000076	Not Available	114355	Open in IMG/M
3300021600\|Ga0194059_1097196	Not Available	920	Open in IMG/M
3300021602\|Ga0194060_10467003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	598	Open in IMG/M
3300021956\|Ga0213922_1120392	Not Available	517	Open in IMG/M
3300021962\|Ga0222713_10095420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Absconditabacteria → Vampirococcus → Candidatus Vampirococcus lugosii	2142	Open in IMG/M
3300021963\|Ga0222712_10076421	Not Available	2406	Open in IMG/M
3300022141\|Ga0213933_101562	Not Available	1968	Open in IMG/M
3300022543\|Ga0212119_1037631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	772	Open in IMG/M
3300022752\|Ga0214917_10060907	Not Available	2455	Open in IMG/M
3300024306\|Ga0255148_1029778	Not Available	1017	Open in IMG/M
3300024481\|Ga0256330_1000988	All Organisms → Viruses → Predicted Viral	4599	Open in IMG/M
3300024512\|Ga0255186_1039368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300024565\|Ga0255273_1011130	All Organisms → Viruses → Predicted Viral	1948	Open in IMG/M
3300024574\|Ga0255275_1190833	Not Available	545	Open in IMG/M
3300025426\|Ga0208739_1027937	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	976	Open in IMG/M
3300025732\|Ga0208784_1087216	Not Available	938	Open in IMG/M
3300025889\|Ga0208644_1061425	All Organisms → Viruses → Predicted Viral	2019	Open in IMG/M
3300027126\|Ga0255098_1026351	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	944	Open in IMG/M
3300027260\|Ga0208027_1000260	Not Available	12094	Open in IMG/M
3300027278\|Ga0208439_1059889	Not Available	720	Open in IMG/M
3300027563\|Ga0209552_1040001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1354	Open in IMG/M
3300027683\|Ga0209392_1243228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	538	Open in IMG/M
3300027693\|Ga0209704_1089639	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300027721\|Ga0209492_1000006	Not Available	95002	Open in IMG/M
3300027764\|Ga0209134_10091713	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1035	Open in IMG/M
3300027805\|Ga0209229_10047868	All Organisms → Viruses → Predicted Viral	1903	Open in IMG/M
3300027808\|Ga0209354_10321593	Not Available	613	Open in IMG/M
3300027816\|Ga0209990_10117432	All Organisms → Viruses → Predicted Viral	1280	Open in IMG/M
3300027816\|Ga0209990_10202850	Not Available	919	Open in IMG/M
3300027816\|Ga0209990_10280364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum cavernae	751	Open in IMG/M
3300027816\|Ga0209990_10305867	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	711	Open in IMG/M
3300027896\|Ga0209777_10003598	Not Available	19042	Open in IMG/M
3300027956\|Ga0209820_1002940	All Organisms → cellular organisms → Bacteria	4151	Open in IMG/M
3300027972\|Ga0209079_10276448	Not Available	570	Open in IMG/M
3300028380\|Ga0268265_10042347	All Organisms → cellular organisms → Bacteria	3378	Open in IMG/M
3300029349\|Ga0238435_108527	Not Available	987	Open in IMG/M
3300029349\|Ga0238435_115180	Not Available	652	Open in IMG/M
3300031758\|Ga0315907_10009644	Not Available	9716	Open in IMG/M
3300031758\|Ga0315907_10040293	All Organisms → Viruses → Predicted Viral	4153	Open in IMG/M
3300031758\|Ga0315907_10124064	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2203	Open in IMG/M
3300031787\|Ga0315900_10006068	Not Available	16375	Open in IMG/M
3300031787\|Ga0315900_10166556	All Organisms → Viruses → Predicted Viral	2009	Open in IMG/M
3300031787\|Ga0315900_10684322	Not Available	730	Open in IMG/M
3300031857\|Ga0315909_10100048	Not Available	2501	Open in IMG/M
3300031857\|Ga0315909_10391909	Not Available	998	Open in IMG/M
3300031951\|Ga0315904_10387252	Not Available	1272	Open in IMG/M
3300031963\|Ga0315901_10303900	Not Available	1320	Open in IMG/M
3300031963\|Ga0315901_10927777	Not Available	616	Open in IMG/M
3300032050\|Ga0315906_10001426	Not Available	35468	Open in IMG/M
3300032050\|Ga0315906_10099857	All Organisms → cellular organisms → Bacteria	2890	Open in IMG/M
3300032050\|Ga0315906_10258461	All Organisms → Viruses	1595	Open in IMG/M
3300032050\|Ga0315906_10533326	Not Available	984	Open in IMG/M
3300032092\|Ga0315905_11003201	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300032093\|Ga0315902_11132165	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	571	Open in IMG/M
3300032116\|Ga0315903_10233583	Not Available	1604	Open in IMG/M
3300032116\|Ga0315903_10429417	All Organisms → Viruses	1066	Open in IMG/M
3300032173\|Ga0315268_11835743	Not Available	619	Open in IMG/M
3300032397\|Ga0315287_12825679	Not Available	513	Open in IMG/M
3300033482\|Ga0316627_102483716	Not Available	546	Open in IMG/M
3300033981\|Ga0334982_0169353	Not Available	1100	Open in IMG/M
3300033996\|Ga0334979_0085461	Not Available	1985	Open in IMG/M
3300034018\|Ga0334985_0181206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1410	Open in IMG/M
3300034019\|Ga0334998_0273350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1014	Open in IMG/M
3300034021\|Ga0335004_0646373	Not Available	553	Open in IMG/M
3300034092\|Ga0335010_0042299	All Organisms → cellular organisms → Bacteria	3345	Open in IMG/M
3300034116\|Ga0335068_0039702	All Organisms → Viruses → Predicted Viral	2800	Open in IMG/M
3300034280\|Ga0334997_0432469	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300034284\|Ga0335013_0487563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	740	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.84%
Host-Associated	Host-Associated	1.16%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.69%
Terrestrial	Environmental → Terrestrial	1.16%
Plants	Host-Associated → Plants	1.16%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	84.39%
Marine	Environmental → Aquatic → Marine	13.29%
Soil	Environmental → Terrestrial → Soil	1.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.16%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	30.06%
Lentic	Environmental → Aquatic → Freshwater → Lentic	27.17%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	11.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.51%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.20%
Coastal	Environmental → Aquatic → Marine → Coastal	4.62%
River	Environmental → Aquatic → Freshwater → River	3.47%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.73%
Creek	Environmental → Aquatic → Freshwater → Creek	1.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.58%
Pond	Environmental → Aquatic → Freshwater → Pond	0.58%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.58%
Sand	Environmental → Terrestrial → Soil → Sand	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	26.59%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	21.97%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	11.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.51%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.62%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.62%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.47%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.47%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.47%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.73%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.73%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.73%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.16%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.58%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.58%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.58%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	16.76%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	10.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.51%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.36%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.62%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.62%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.47%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.89%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.89%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.31%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.31%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.73%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	1.73%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.73%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.73%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.16%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.16%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.16%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.16%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.58%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.58%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.58%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.58%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.58%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.58%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.58%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.58%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.58%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.58%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.58%
Marine Sediment	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine Sediment	0.58%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.58%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300001850	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2a	Environmental	Open in IMG/M
3300001968	Marine microbial communities from Lake Gatun, Panama - GS020	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002476	Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300003808	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Aug07	Environmental	Open in IMG/M
3300003827	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004383	Marine microbial communities from Bothnian Bay, Baltic Sea	Environmental	Open in IMG/M
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005739	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007169	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007171	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007658	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020540	Freshwater microbial communities from Lake Mendota, WI - 13JUN2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020543	Freshwater microbial communities from Lake Mendota, WI - 29JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020551	Freshwater microbial communities from Lake Mendota, WI - 27JUL2010 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300021600	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022141	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022543	Indian_combined assembly	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300024306	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8h	Environmental	Open in IMG/M
3300024481	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024512	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_0h	Environmental	Open in IMG/M
3300024565	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024574	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025426	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027126	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8d	Environmental	Open in IMG/M
3300027260	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02 (SPAdes)	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029349	Freshwater microbial communities from Iron Gate Dam, Klamath Basin, California, USA - IR103	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1006382843	3300001213	Wetland	MKAGKPRRAPKVTPPRPVNANYMKEADTKLRLKSKMWPMKSKRLSK*
JGIcombinedJ13530_1061252208	3300001213	Wetland	MSVLTSKTSLKKAPKVKNPRPKDNYMKEADTKLRLKSPMWPMKQKRLSK*
B570J14230_101477702	3300001282	Freshwater	KPRPAPKVAPPNPINGNYMKEADTKLRLKSKMWPLKQKRLSK*
RCM37_11105532	3300001850	Marine Plankton	MKGSGKPKKAPKVSPPRPINSNYMKEADTKLRRASKMWPLKTKRLSK*
RCM37_11413172	3300001850	Marine Plankton	MSASNKTPGKPRKAPKVKNPMPKSNYMKEADRPERLKSPMWPMKQKRLSK*
GOS2236_10423434	3300001968	Marine	VVVNAEEAATNMKAGKPKKAPKVTNPRPNANYMKEADTKLRLKSKMWPLKQKRLSK*
JGI24218J26658_10156622	3300002092	Lentic	MKSGKPRQAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK*
JGI24766J26685_101365432	3300002161	Freshwater And Sediment	MKAGKPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPLKQKRLSK*
B570J29032_1093522861	3300002408	Freshwater	KAKKSGKPRKAPKVAPPNPINGNYMKEADTKLRLKSPQWPMKRKRLSK*
metazooDRAFT_109009141	3300002476	Lake	AEEVAINMKAGKPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPLKTKRLSK*
JGI25922J50271_100272572	3300003413	Freshwater Lake	MKSGRPKKAPKVSPPRPINANYMKEADTKLRRKSKMWPMKSKRLSK*
JGI25925J51416_100986251	3300003497	Freshwater Lake	RKAPKVNNPNPKDNFMREADTKLRLKSPMLPMKQKRLSK*
Ga0007844_100000630	3300003808	Freshwater	MKSGKPRPAPKVKPPSKAKPNFMKEADTKERLKSPMWPMKQKRLSK*
Ga0007880_10188001	3300003827	Freshwater	RKAPKVKPPSRKAPNFMKEADTKERLKSPMWPMKQKRLSK*
Ga0031655_1000239617	3300003852	Freshwater Lake Sediment	MKSGKPRPAPKVKPPSKAAPNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0031658_10716752	3300003860	Freshwater Lake Sediment	MKAGKPKKAPKVHNPRPNANYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0066603_105656841	3300004154	Freshwater	MKSGKPRPAPKVKAPSRANPNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0007787_100605633	3300004240	Freshwater Lake	MKSGKPKLAPKVKNPRPKDNYMKEADTKLRLKSPQWPMKQKRLSK*
Ga0064591_101883631	3300004383	Marine Sediment	MSVLKSKTSLKKAPKVPPPKPINGNYMKEADTKLRLKSPQWPMKQKRLSK*
Ga0007756_115016262	3300004795	Freshwater Lake	MKSGKPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWPMKSK
Ga0068876_100115333	3300005527	Freshwater Lake	MKSGKPKKAPKVNNPRPKDNYMRESDSKLRLKSPMFPLKSKRLSK*
Ga0068876_100150384	3300005527	Freshwater Lake	MKAGKPKKAPKVHNPRPKDNYMKEADTKLRLKSKMWPMRVKRLSK*
Ga0068876_100618686	3300005527	Freshwater Lake	VVDVEEDANMKSGKPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWPLKSKRL
Ga0068876_100781071	3300005527	Freshwater Lake	MKSGRPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPMKVKRLSK*
Ga0068876_101524563	3300005527	Freshwater Lake	MKSGKPKKAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0068876_101835673	3300005527	Freshwater Lake	MKAGKPKKAPKVHNPNPKGNFMREADTKLRLKSKMWPMKSKRLSK*
Ga0068876_102215822	3300005527	Freshwater Lake	VVNVNTDVNMKAGKPKKAPKVHNPNPLGNFMREADTKLRLKSKNWPLKQKRLSK*
Ga0068876_102738593	3300005527	Freshwater Lake	KPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWPLKSKRLSK*
Ga0068876_103528491	3300005527	Freshwater Lake	MKSGRPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWPLKSKRLSK*
Ga0068872_106502293	3300005528	Freshwater Lake	MKAGKPKKAPKVHNPNPKGNFMREADTKLRLKSKNWPLK
Ga0078894_105806543	3300005662	Freshwater Lake	MHKPVKAPKVAPPKPVDANYMKEADTPARLRSKMWPLKQKRLSK*
Ga0076948_11006324	3300005739	Lake Water	MKAGKPKKAPKVPNPRPKDNYMKEADTKLRLRSKMWPLRQKRLSK*
Ga0078117_10284431	3300005758	Lake Water	NMKSGKPKKAPKVSPPRPINGNYMKEADTKLRLKSKMWPMKVKRLSK*
Ga0078117_10827413	3300005758	Lake Water	MKAGKPKKAPKVHNPNPKGNFMKEADTKLRLKSKMWPMRQKRLSK*
Ga0079957_100142231	3300005805	Lake	MKAGKPKKAPKVPNPRPNANYMKEADTKLRLKSKMWPMKVKRLSK*
Ga0079957_101287511	3300005805	Lake	MKSGKPKKAPKVHNPRPKDNYMKEADTKLRLKSPMWPMKQKRLSK*
Ga0079957_11596924	3300005805	Lake	MKSGKPRKAPKVHNPNVKGNYMKEADTKLRLKSKMWPMKQKRLSK*
Ga0068862_1000560464	3300005844	Switchgrass Rhizosphere	MKSGKPKKAPKVNNPDPKGNYMKEFDQPKNLKSKMWPLKSKRLSK*
Ga0073913_100146352	3300005940	Sand	MKSGKPKKAPKVSPPKPVNANYMKEADTKLRRSSKMWPMKSKRLSK*
Ga0007816_10482664	3300006115	Freshwater	MKAGKPRKAPKVKPPSRKAPNFMKEADTKERLKSPMWPM
Ga0079037_1023401612	3300006224	Freshwater Wetlands	MKSGKPKKAPKVPPPKPINGNYMKEADTKLRLKSKMWPLKSKRLSK*
Ga0075471_105337212	3300006641	Aqueous	MKAGKPKKAPKVPNPRPNANYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0075471_105829491	3300006641	Aqueous	VVNVNTVVNMKSGKPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPMK
Ga0070749_100670841	3300006802	Aqueous	MKSGKPQKAPKVKAPNPKKPNFMREADTPSRLKSPMAPMKQKRLSK*
Ga0075464_107823602	3300006805	Aqueous	MKSGKPQKAPKVKAPNPKKPNFMREADTPSRLKSPMAPMKSKRLSK*
Ga0075472_100356123	3300006917	Aqueous	MKSGKPKKAPKVPPPKPINANYMKEADTKLRRSSKMWPMKTKRLSK*
Ga0102976_10088762	3300007169	Freshwater Lake	MKSGRPKKAPKVSPPRPINGNYMKEADTKLRLKSKMWPMKVKRLSK*
Ga0102977_10018022	3300007171	Freshwater Lake	MKSGKPKKAPKVSPPRPINGNYMKEADTKLRLKSKMWPMKVKRLSK*
Ga0102914_11384161	3300007561	Estuarine	SGTPRPAPKVAPPKPVNGNYMKEADTPRRLQSKMWPLKQKRLSK*
Ga0102868_11093992	3300007653	Estuarine	APPKPINGNYMKESDTPARLKSKMWPLKQKRLSK*
Ga0102898_10178581	3300007658	Estuarine	AKGSGTPRPAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0102862_11032851	3300007670	Estuarine	KGSGTPRPAPKVAAPSRAKPNYMKEADTPARLKSKMWPLKQKRLSK*
Ga0114340_10906773	3300008107	Freshwater, Plankton	KAPKVHNPNPLGNFMREADTKLRLKSKMWPLKQKRLSK*
Ga0114341_1001009011	3300008108	Freshwater, Plankton	MKAGKPKKAPKVHNPNPLGNFMREADTKLRLKSKMWPLKQKRLSK*
Ga0114341_1002037214	3300008108	Freshwater, Plankton	MKAGKPKKAPKVHNPNPLGNFMREADTKLRLKSKMWPLKSKRLSK*
Ga0114341_103283172	3300008108	Freshwater, Plankton	VVNVNTDVNNMKAGKPKKAPKVHNPNPKGNFMREADTKLRLKSKMWPMKSKRLSK*
Ga0114350_103343512	3300008116	Freshwater, Plankton	KKAPKVHNPSPKNNYMKEADTKLRLKSPMWPMKQKRLSK*
Ga0114351_100136832	3300008117	Freshwater, Plankton	MKAGKPKKAPKVHNPNPKGNFMKESDTKLRLKSPQWPMKQKRLSK*
Ga0114355_10393984	3300008120	Freshwater, Plankton	MKSGKPKKAPKVHNPSPKNNYMKEADTKLRLKSPMWPMKQKRLSK*
Ga0114355_11706762	3300008120	Freshwater, Plankton	MKAGKPKKAPKVHNPNPKGNFMKESDTKLRLKSPQWPMKQKRLAK*
Ga0114841_11537211	3300008259	Freshwater, Plankton	GKPKKAPKVHNPRPKDNYMKEADTKLRLKSKMWPMRVKRLSK*
Ga0114363_10755362	3300008266	Freshwater, Plankton	MKAGKPKKAPKVHNPRPNANYMKEADTKLRLKSKMWPLRQKRLSK*
Ga0114364_100283117	3300008267	Freshwater, Plankton	MKAGKPKKAPKVHNPNPKGNYMKEADTKLRLKSKMWPMKSKRLSK*
Ga0114876_11286982	3300008448	Freshwater Lake	MKAGKPKKAPKVHNPNPKGNYMKEADTKLRLKSSMWPMKQKRLSK*
Ga0114876_11401561	3300008448	Freshwater Lake	PKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0114876_12294012	3300008448	Freshwater Lake	PKVAPPKPINGNYMREADTPSRLKSKMWPLKQKRLSK*
Ga0114880_10681343	3300008450	Freshwater Lake	MKAGKPKKAPKVPPPKPINANYMKEADTKLRRSSKMWPMKTKRLSK*
Ga0102829_10233291	3300009026	Estuarine	KPAKAPKVASPKPINGNFMREADTPSRLKSPMAPMKQKRLSK*
Ga0102830_10501373	3300009059	Estuarine	SGTPRPAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0105098_100013759	3300009081	Freshwater Sediment	MKSGKPRTAPKVNNPRPKDNYMKEADTKLRLKSKMWPMKQKRLSK*
Ga0105098_108286682	3300009081	Freshwater Sediment	APKVAPPNPVDGNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0105102_101148641	3300009165	Freshwater Sediment	APKVKNPRPKDNYMKEADTKLRLKSPQWPMKQKRLSK*
Ga0105102_105293352	3300009165	Freshwater Sediment	MKSGKPKKAPKVAPPKPVNGNYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0105096_100423034	3300009170	Freshwater Sediment	PKVKNPRPKDNYMKEADTKLRLKSPQWPMKQKRLSK*
Ga0105096_101036432	3300009170	Freshwater Sediment	MKSGKPRTAPKVNNPRPKDNYMKEADTKLRLKSKMWPMKSKRLSK*
Ga0105096_102161552	3300009170	Freshwater Sediment	MKAGKPKKAPKVHNPNPKGNFMREADTKLRLKSKMWPLKQKRLSK*
Ga0105096_103606671	3300009170	Freshwater Sediment	IWLLMKAGKPKKAPKVHNPRPNANYMKEADTKLRLKSKMWPLKQKRLSK*
Ga0114958_100778533	3300009684	Freshwater Lake	MKSGQPKKAPKVINPKPKDNYMKEGDTKLRLKSKMWPLKSKRLSK*
Ga0157138_100018918	3300012352	Freshwater	MKSGKPRKAPKVKAPNPKKPNFMREADTPSRLKSPMAPMKQKRLSK*
Ga0129337_13172891	3300012968	Aqueous	MKSGRPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWPLKSKR
Ga0164293_101206791	3300013004	Freshwater	MTAGKAKGSGKPRPAPKVAPPNPVDGNYMKEADTKLRLRSKNWPLKQKRLSK*
(restricted) Ga0172372_107669561	3300013132	Freshwater	MKSGRPKKAPKVSPPRPVNANYMKEADTKLRRKSKMW
Ga0181352_10702713	3300017747	Freshwater Lake	PKVKPPKPINGNYMKEADTPSRLKSPMAPMKQKRLSK
Ga0181344_10090281	3300017754	Freshwater Lake	KSGAPKKAPKVPNPRPKDNYMKEADTKLRLKSPMWPMKQKRLSK
Ga0181344_10867581	3300017754	Freshwater Lake	KAPKVSPPKPVNANYMKEADTKLRRSSKMWPMKSKRLSK
Ga0181344_11861151	3300017754	Freshwater Lake	MKSGKPRKAPKVKAPNPKKPNFMREADTPSRLKSPMAPMKQKRLSK
Ga0181344_12393721	3300017754	Freshwater Lake	MKSGKPKKAPKVSPPKPVNANYMKEADTKLRRSSKMWPMKSKRLSK
Ga0181343_12181662	3300017766	Freshwater Lake	MTSGKAKKSGTPQKAPKVKNPRPKDNYMKEADTKLRLKSKMWPMKQ
Ga0169931_104263043	3300017788	Freshwater	VVNAEEVAINMKSGRPKKAPKVSPPRPVNANYMKEADTKLRRKSKMWPMKT
Ga0181359_11182442	3300019784	Freshwater Lake	VVNAEEVATNMKSGRPKKAPKVPNPRPNANYMKEADTKLRLKSKMWPLKTKRLSK
Ga0207193_102205120	3300020048	Freshwater Lake Sediment	MKSGKPQKAPKVKAPNPKKPNFMREADTPSRLKSPMAPMKSKRLSK
Ga0211736_109481615	3300020151	Freshwater	SGTPRPAPKVAPPKPINGNYMKESDTPARLKSKMWPLKQKRLSK
Ga0211735_111543218	3300020162	Freshwater	SGTPRPAPKVAPPKPVNGNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0208227_10202883	3300020540	Freshwater	AGKAKKSGKPRKAPKVAPPNPINGNYMKEADTKLRLKSPQWPMKRKRLSK
Ga0208089_10015661	3300020543	Freshwater	KAKKSGKPRKAPKVAPPNPINGNYMKEADTKLRLKSPQWPMKQKRLSK
Ga0208360_10147273	3300020551	Freshwater	PKVAPPKPVDGNYMKEADTKLRLRSKMWPLKQKRLSK
Ga0194055_1000095420	3300021079	Anoxic Zone Freshwater	MKSGTPRKAPKVKAPSKKSPNFMREANTKLRLKSPMAPMKQKRLSK
Ga0214192_10336792	3300021142	Freshwater	MKSGKPRPAPKVKPPSKAKPNFMKEADTKERLKSPMWPMKQKRLSK
Ga0194047_1000004998	3300021354	Anoxic Zone Freshwater	MKSGKPQKAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0213920_1000076137	3300021438	Freshwater	MKSGKPRNAPKVKAPNPKKPNFMKEADTPSRLKSPMTPMKSKRLSK
Ga0194059_10971962	3300021600	Anoxic Zone Freshwater	MKSGQPKKAPKVINPKPKDNYMKEGDTKLRLKSKMWPLKSKRLSK
Ga0194060_104670032	3300021602	Anoxic Zone Freshwater	PAKAPKVANPKPVDANYMKEADTPSRLKSPMLPMKQKRLSK
Ga0213922_11203921	3300021956	Freshwater	MKSGKPQKAPKVAPPKPVNSNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0222713_100954202	3300021962	Estuarine Water	MKAGKPRRAPKVTPPRPVNANYMKEADTKLRLKSKMWPMKSKRLSK
Ga0222712_100764216	3300021963	Estuarine Water	QKAPKVAPPKPVDGNYMREADTPRRLKSPMWPLKQKRLSK
Ga0213933_1015626	3300022141	Freshwater	MKSGKPRNAPKVKAPNPKKPNFMKEADTPSRLKIPMTPMKSKRLSK
Ga0212119_10376312	3300022543	Freshwater	MKSGKPKKAPKVAPPKPVNGNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0214917_100609073	3300022752	Freshwater	VVNAEEVATNMKSGRPKKAPKVSPPRPINGNYMKEADTKLRLKSKMWPLKTKRLSK
Ga0255148_10297782	3300024306	Freshwater	MKAGKPRRAPKVTNPRPKDNYMKEADTKLRLKSKMWPMKQKRLSK
Ga0256330_10009881	3300024481	Freshwater	MKAGKPKKAPKVPPPKPINANYMKEADTKLRRSSKMWPMKSKRLSK
Ga0255186_10393681	3300024512	Freshwater	MKAGKPKKAPKVPNPRPKDNYMKEADTKLRLKSKMW
Ga0255273_10111301	3300024565	Freshwater	MKAGKPKKAPKVPPPKPINANYMKEADTKLRRSSKMW
Ga0255275_11908332	3300024574	Freshwater	LMKAGKPRRAPKVTNPRPKDNYMKEADTKLRLKSKMWPMKQKRLSK
Ga0208739_10279374	3300025426	Freshwater	MKAGKPRKAPKVKPPSRKAPNFMKEADTKERLKSPMWPMKQKRL
Ga0208784_10872163	3300025732	Aqueous	VNTVVNMKSGKPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPMKVKRLSK
Ga0208644_10614251	3300025889	Aqueous	MKSGKPQKAPKVKNPNPKGNYMKEADTKLRLKSKMWPMKQK
Ga0255098_10263511	3300027126	Freshwater	PRPAPKVAPPKPINGNYMKEADTPARLKSKMWPLKQKRLSK
Ga0208027_10002601	3300027260	Estuarine	PRPAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0208439_10598892	3300027278	Estuarine	PAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0209552_10400011	3300027563	Freshwater Lake	KVAPPKPINGNYMREADTPSRLKSPMLPMKQKRLSK
Ga0209392_12432282	3300027683	Freshwater Sediment	APKVKNPRPKDNYMKEADTKLRLKSPQWPMKQKRLSK
Ga0209704_10896392	3300027693	Freshwater Sediment	MKAGKPKKAPKVHNPRPNANYMKEADTKLRLKSKMWPLKQKRLSK
Ga0209492_100000625	3300027721	Freshwater Sediment	MKSGRPKKAPKVSPPRPINANYMKEADTKLRRKSKMWPMKSKRLSK
Ga0209134_100917131	3300027764	Freshwater Lake	KAPKVPNSRPKDNYMKEADTKLRLKSPMFPMKQKRLSK
Ga0209229_100478683	3300027805	Freshwater And Sediment	MKAGKPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0209354_103215933	3300027808	Freshwater Lake	KKSGAPRKAPKVPNSRPKDNYMKEADTKLRLKSPQWPMKQKRLSK
Ga0209990_101174321	3300027816	Freshwater Lake	MKSGKPKKAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0209990_102028501	3300027816	Freshwater Lake	MTSGKAKGSGKPRPAPKVAPPKPINGNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0209990_102803642	3300027816	Freshwater Lake	VVNAEEVAINMKSGRPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPMKVKRLSK
Ga0209990_103058673	3300027816	Freshwater Lake	MKAGKPKKAPKVHNPNPKGNFMREADTKLRLKSKNWPLKQKRLSK
Ga0209777_1000359819	3300027896	Freshwater Lake Sediment	MKSGKPRPAPKVKPPSKAAPNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0209536_1027658331	3300027917	Marine Sediment	MAANKKTSLKKAPKVSNPNVKGNYMKEADTKLRLKSPMLPMKQKRLSK
Ga0209820_10029408	3300027956	Freshwater Sediment	MKSGKPRTAPKVNNPRPKDNYMKEADTKLRLKSKMWPMKQKRLSK
Ga0209079_102764482	3300027972	Freshwater Sediment	KAPKVAPPKPVDGNYMREADTPLRLKSKMWPLKQKRLSK
Ga0268265_100423474	3300028380	Switchgrass Rhizosphere	MKSGKPKKAPKVNNPDPKGNYMKEFDQPKNLKSKMWPLKSKRLSK
Ga0238435_1085272	3300029349	Freshwater	VANAEEVATNMKSGRPKKAPKVPNPRPNANYMKEADTKLRLKSKMWPLKTKRLSK
Ga0238435_1151802	3300029349	Freshwater	VAPPNPINGNYMKEADTKLRLKSPQWPMKQKRLSK
Ga0315291_109388012	3300031707	Sediment	MSVLKSKTSLKKAPKVAPPKPINGNYMKEADTKLRLKSPQWPMKRKRLSK
Ga0315907_100096445	3300031758	Freshwater	MKSGKPKKAPKVNNPRPKDNYMRESDSKLRLKSPMFPLKSKRLSK
Ga0315907_100402936	3300031758	Freshwater	MKAGKPKKAPKVPPPKPINANYMKEADTKLRRSSKMWPMKTKRLSK
Ga0315907_101240644	3300031758	Freshwater	MKSGKPKKAPKVHNPSPKNNYMKEADTKLRLKSPMWPMKQKRLSK
Ga0315900_1000606823	3300031787	Freshwater	MKAGKPKKAPKVHNPNPKGNFMREADTKLRLKSKMWPMKSKRLSK
Ga0315900_101665562	3300031787	Freshwater	MKSGKPKKAPKVHNPNPKGNFMKEADTKLRLKSKMWPMKSKRLSK
Ga0315900_106843221	3300031787	Freshwater	VVNAEEVATNMKSGRPKKAPKVPNPRPNSNYMKEPDTKLRLKSKMWPMKVKRLSK
Ga0315909_101000488	3300031857	Freshwater	MKSGKPKKAPKVNNPNPKGNYMKEADTKLRLKSPQWPMKQKRLSK
Ga0315909_103919093	3300031857	Freshwater	MKSGKPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWP
Ga0315904_103872523	3300031951	Freshwater	PKVPPPKPINANYMKEADTKLRRSSKMWPMKTKRLSK
Ga0315901_103039003	3300031963	Freshwater	KVNNPRPKDNYMRESDSKLRLKSPMFPLKSKRLSK
Ga0315901_109277771	3300031963	Freshwater	GKAKKSGAPRKAPKVPNPRPKDNYMKEADTKLRLKSPMWPMKSKRLSK
Ga0315289_107016872	3300032046	Sediment	MSVLKSKTSLKKAPKVAPPKPINGNYMKEADTKLRLKSPQWPMKRKRFSK
Ga0315906_1000142652	3300032050	Freshwater	MKAGKPKKAPKVHNPNPKGNFMKESDTKLRLKSPQWPMKQKRLSK
Ga0315906_100998572	3300032050	Freshwater	MKSGRPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPMKVKRLSK
Ga0315906_102584611	3300032050	Freshwater	VEDAEEDANMKSGKPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWPLKSKR
Ga0315906_105333261	3300032050	Freshwater	MKSGKPKKAPKVPNPRPKDNYMKEADTKLRLKSKMWPLKSKR
Ga0315905_110032011	3300032092	Freshwater	AGKPKKAPKVHNPRPKDNYMKEADTKLRLKSPQWPMKQKRLSK
Ga0315902_111321651	3300032093	Freshwater	PRQAPKVKNPRPKDNYMKEADTKLRLKSKMWPMKQKRLSK
Ga0315903_102335832	3300032116	Freshwater	MKSGRPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPMKSKRLSK
Ga0315903_104294174	3300032116	Freshwater	MKSGKPKKAPKVHNPSPKNNYMKEADTKLRLKSPMWPMKQKRLS
Ga0315268_118357431	3300032173	Sediment	KVSPPSKKAPNYMKEADTKLRLKSKMWPLKQKRLSK
Ga0315287_128256792	3300032397	Sediment	KAKKSGKPKKAPKVAPPNPINGNYMREADTKLRLKSPQWPMKQKRLSK
Ga0315273_130109581	3300032516	Sediment	MSVLKSKTSLKKAPKVAPPKPINGNYMKEADTKLRLKSPQWPMK
Ga0316627_1024837161	3300033482	Soil	MKSGKPKKAPKVKNPNPKGNYMKEADTKLRLKSPMWPMKQKR
Ga0334982_0169353_968_1099	3300033981	Freshwater	GKPRPAPKVAPPNPINGNYMKEADTKLRLRSKMWPLKQKRLSK
Ga0334979_0085461_2_157	3300033996	Freshwater	TAGKAKGSGKPRPAPKVAPPNPVDGNYMKEADTKLRLRSKNWPLKQKRLSK
Ga0334985_0181206_10_168	3300034018	Freshwater	MTAGKAKGSGTPRPAPKVAPPKPVNGNYMKEADTPARLKSKMWPLKQKRLSK
Ga0334998_0273350_2_163	3300034019	Freshwater	NAEEVAINMKSGKPKKAPKVPNPRPNANYMKEADTKLRLKSKMWPLKTKRLSK
Ga0335004_0646373_34_171	3300034021	Freshwater	MKSGKPKKAPKVPNPRPNSNYMKEADTKLRLKSKMWPMKVKRLSK
Ga0335010_0042299_727_864	3300034092	Freshwater	MKSGRPKKAPKVKNPRPKDNYMKEADTKLRLKSPQWPMEQKRLSK
Ga0335029_0300074_819_971	3300034102	Freshwater	MSILKSKTSLKKAPKVAPPKPINGNYMNEADTKLRLKSPQWPMKQKRLSK
Ga0335068_0039702_63_230	3300034116	Freshwater	VVNAEEVATNMKSGKPKKAPKVPNPRPNANYMKEADTKLRLKSKMWPLKTKRLSK
Ga0334997_0432469_3_131	3300034280	Freshwater	GKPKKAPKVHNPRPNANYMKEADTKLRLKSKMWPLKQKRLSK
Ga0335007_0413652_721_837	3300034283	Freshwater	APKVPAPKPINGNYMKESDTKLQRKSPMLPMKQKRLSK
Ga0335013_0487563_595_738	3300034284	Freshwater	AKGSGKPRPAPKVAPPNPVDGNYMKEADTKLRLRSKNWPLKQKRLSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters