Metagenome / Metatranscriptome Family F033929

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033929
Family Type	Metagenome / Metatranscriptome
Number of Sequences	176
Average Sequence Length	82 residues
Representative Sequence	MPYADFCPAVRMPLGSLSRRSDTEQISWGKLSRLPCAIAESTLRTLDGYGLRGKLPARPALAPYIRFLSIDSHVCSTLPSDLASRR
Number of Associated Samples	159
Number of Associated Scaffolds	176

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.57 %
% of genes near scaffold ends (potentially truncated)	53.41 %
% of genes from short scaffolds (< 2000 bps)	76.14 %
Associated GOLD sequencing projects	148
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.977 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.636 % of family members)
Environment Ontology (ENVO)	Unclassified (18.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.568 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.42% β-sheet: 0.00% Coil/Unstructured: 81.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 176 Family Scaffolds
PF08388	GIIM	21.59
PF00078	RVT_1	13.07
PF13495	Phage_int_SAM_4	6.25
PF14319	Zn_Tnp_IS91	3.98
PF02371	Transposase_20	2.84
PF01590	GAF	0.57
PF00144	Beta-lactamase	0.57
PF13683	rve_3	0.57
PF00656	Peptidase_C14	0.57
PF13610	DDE_Tnp_IS240	0.57
PF07687	M20_dimer	0.57
PF07676	PD40	0.57
PF08327	AHSA1	0.57
PF04986	Y2_Tnp	0.57
PF13847	Methyltransf_31	0.57
PF13883	Pyrid_oxidase_2	0.57
PF04365	BrnT_toxin	0.57
PF13408	Zn_ribbon_recom	0.57

COG ID	Name	Functional Category	% Frequency in 176 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.84
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.57
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.57
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.57
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.57
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.98 %
Unclassified	root	N/A	46.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.98 %
Unclassified	root	N/A	46.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.98 %
Unclassified	root	N/A	46.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.50 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.95 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.27 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.57 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.39 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.14 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.14 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.57 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.82 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	4.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.14 %
Pectobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae	1.14 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.14 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.57 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.57 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.57 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.82 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	4.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.14 %
Dickeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya	1.14 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.57 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.57 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.57 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.57 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.57 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.98 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Dickeya chrysanthemi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya → Dickeya chrysanthemi	1.14 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.14 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1.14 %
Desulfobulbus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus	0.57 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.57 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.57 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.57 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.57 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.98 %
Bradyrhizobium sp. 164	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	3.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.27 %
Dickeya chrysanthemi Ech1591	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya → Dickeya chrysanthemi → Dickeya chrysanthemi Ech1591	1.14 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.14 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1.14 %
Desulfobulbus propionicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus propionicus	0.57 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.57 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.57 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.57 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.57 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10022063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1523	Open in IMG/M
3300000897\|JGI12167J12862_101931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300001083\|JGI12678J13193_1000445	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300001181\|JGI12663J13571_104138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	534	Open in IMG/M
3300001405\|JGI20186J14852_1001343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1831	Open in IMG/M
3300001410\|JGI20179J14886_1001368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2072	Open in IMG/M
3300001427\|JGI20200J14955_1017689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	630	Open in IMG/M
3300001455\|JGI11848J15208_100013	Not Available	2658	Open in IMG/M
3300001593\|JGI12635J15846_10735979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	567	Open in IMG/M
3300001661\|JGI12053J15887_10242014	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300001809\|JGI20220J20339_1048592	Not Available	680	Open in IMG/M
3300001867\|JGI12627J18819_10026379	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300002245\|JGIcombinedJ26739_100191092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1936	Open in IMG/M
3300002245\|JGIcombinedJ26739_100200369	All Organisms → cellular organisms → Bacteria → Acidobacteria	1887	Open in IMG/M
3300002245\|JGIcombinedJ26739_100414062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300002908\|JGI25382J43887_10064653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1979	Open in IMG/M
3300003223\|JGI26343J46809_1000430	Not Available	2382	Open in IMG/M
3300003432\|JGI20214J51088_10884998	Not Available	584	Open in IMG/M
3300003432\|JGI20214J51088_11051446	Not Available	536	Open in IMG/M
3300003541\|JGI20214J51650_10150514	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300004022\|Ga0055432_10234296	Not Available	537	Open in IMG/M
3300004023\|Ga0055441_10054355	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300004081\|Ga0063454_101731600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	545	Open in IMG/M
3300004153\|Ga0063455_101633451	Not Available	509	Open in IMG/M
3300004478\|Ga0068972_1540619	Not Available	722	Open in IMG/M
3300004633\|Ga0066395_10045228	Not Available	1921	Open in IMG/M
3300005160\|Ga0066820_1005640	Not Available	727	Open in IMG/M
3300005178\|Ga0066688_10789360	Not Available	595	Open in IMG/M
3300005332\|Ga0066388_105455036	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300005367\|Ga0070667_100911140	Not Available	819	Open in IMG/M
3300005434\|Ga0070709_10102138	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300005435\|Ga0070714_100915531	Not Available	852	Open in IMG/M
3300005435\|Ga0070714_101594847	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005439\|Ga0070711_100036455	All Organisms → cellular organisms → Bacteria	3294	Open in IMG/M
3300005445\|Ga0070708_100120167	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300005445\|Ga0070708_100204950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1847	Open in IMG/M
3300005468\|Ga0070707_100191646	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300005468\|Ga0070707_101194970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	727	Open in IMG/M
3300005526\|Ga0073909_10092123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1183	Open in IMG/M
3300005538\|Ga0070731_10159159	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300005540\|Ga0066697_10280229	Not Available	983	Open in IMG/M
3300005552\|Ga0066701_10666570	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300005555\|Ga0066692_10254849	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005558\|Ga0066698_10207587	Not Available	1341	Open in IMG/M
3300005598\|Ga0066706_10944405	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_100717159	All Organisms → cellular organisms → Bacteria → Proteobacteria	1767	Open in IMG/M
3300005764\|Ga0066903_103565902	Not Available	838	Open in IMG/M
3300005833\|Ga0074472_10364583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	629	Open in IMG/M
3300005921\|Ga0070766_10072182	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300006050\|Ga0075028_100415882	Not Available	771	Open in IMG/M
3300006052\|Ga0075029_100596495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya → Dickeya chrysanthemi → Dickeya chrysanthemi Ech1591	738	Open in IMG/M
3300006057\|Ga0075026_100949220	Not Available	531	Open in IMG/M
3300006059\|Ga0075017_100204679	Not Available	1428	Open in IMG/M
3300006102\|Ga0075015_100138799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	1255	Open in IMG/M
3300006162\|Ga0075030_100176817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya → Dickeya chrysanthemi → Dickeya chrysanthemi Ech1591	1722	Open in IMG/M
3300006173\|Ga0070716_100518294	Not Available	883	Open in IMG/M
3300006174\|Ga0075014_100102793	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300006354\|Ga0075021_10377516	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300006354\|Ga0075021_11116089	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300006573\|Ga0074055_11272525	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006796\|Ga0066665_10927549	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006796\|Ga0066665_11055922	Not Available	620	Open in IMG/M
3300006797\|Ga0066659_10802460	Not Available	779	Open in IMG/M
3300006844\|Ga0075428_100143149	All Organisms → cellular organisms → Bacteria → Proteobacteria	2599	Open in IMG/M
3300006844\|Ga0075428_100267877	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1838	Open in IMG/M
3300006847\|Ga0075431_100079377	All Organisms → cellular organisms → Bacteria	3387	Open in IMG/M
3300006854\|Ga0075425_102288761	Not Available	601	Open in IMG/M
3300006871\|Ga0075434_101380381	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300006893\|Ga0073928_10108338	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300006893\|Ga0073928_10840246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	632	Open in IMG/M
3300006904\|Ga0075424_100640677	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300007258\|Ga0099793_10038682	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300009012\|Ga0066710_103145311	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300009038\|Ga0099829_10594077	Not Available	920	Open in IMG/M
3300009090\|Ga0099827_10014113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5302	Open in IMG/M
3300009162\|Ga0075423_12930782	Not Available	523	Open in IMG/M
3300009553\|Ga0105249_10080696	All Organisms → cellular organisms → Bacteria	3023	Open in IMG/M
3300009839\|Ga0116223_10005423	All Organisms → cellular organisms → Bacteria	10753	Open in IMG/M
3300010048\|Ga0126373_12591956	Not Available	565	Open in IMG/M
3300010329\|Ga0134111_10464976	Not Available	551	Open in IMG/M
3300010333\|Ga0134080_10698132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	503	Open in IMG/M
3300010376\|Ga0126381_102725481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300010398\|Ga0126383_12827310	Not Available	567	Open in IMG/M
3300011044\|Ga0138545_101735	Not Available	512	Open in IMG/M
3300012189\|Ga0137388_11345177	Not Available	654	Open in IMG/M
3300012199\|Ga0137383_10314146	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1147	Open in IMG/M
3300012199\|Ga0137383_11345774	Not Available	507	Open in IMG/M
3300012203\|Ga0137399_10282777	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300012206\|Ga0137380_10039794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4334	Open in IMG/M
3300012206\|Ga0137380_10134550	Not Available	2256	Open in IMG/M
3300012207\|Ga0137381_11180883	Not Available	658	Open in IMG/M
3300012209\|Ga0137379_10160193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	2162	Open in IMG/M
3300012211\|Ga0137377_11588368	Not Available	578	Open in IMG/M
3300012353\|Ga0137367_10192075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1481	Open in IMG/M
3300012363\|Ga0137390_10763585	Not Available	926	Open in IMG/M
3300012927\|Ga0137416_10953473	Not Available	765	Open in IMG/M
3300012930\|Ga0137407_11314134	Not Available	687	Open in IMG/M
3300012971\|Ga0126369_12782269	Not Available	572	Open in IMG/M
3300013296\|Ga0157374_11690532	Not Available	658	Open in IMG/M
3300015053\|Ga0137405_1204222	Not Available	709	Open in IMG/M
3300015245\|Ga0137409_10101930	All Organisms → cellular organisms → Bacteria → Acidobacteria	2662	Open in IMG/M
3300015356\|Ga0134073_10286867	Not Available	582	Open in IMG/M
3300016341\|Ga0182035_11170843	Not Available	686	Open in IMG/M
3300016357\|Ga0182032_10321306	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300016357\|Ga0182032_10554334	Not Available	951	Open in IMG/M
3300016371\|Ga0182034_11000781	Not Available	722	Open in IMG/M
3300017932\|Ga0187814_10024396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2262	Open in IMG/M
3300017946\|Ga0187879_10050261	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300017955\|Ga0187817_10628285	Not Available	685	Open in IMG/M
3300017961\|Ga0187778_10515386	Not Available	795	Open in IMG/M
3300017973\|Ga0187780_10120356	Not Available	1814	Open in IMG/M
3300017973\|Ga0187780_11136274	Not Available	571	Open in IMG/M
3300018019\|Ga0187874_10050026	Not Available	1943	Open in IMG/M
3300018025\|Ga0187885_10081776	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300018030\|Ga0187869_10317828	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300018040\|Ga0187862_10112074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1877	Open in IMG/M
3300019887\|Ga0193729_1043297	Not Available	1853	Open in IMG/M
3300019888\|Ga0193751_1000310	All Organisms → cellular organisms → Bacteria	41075	Open in IMG/M
3300021086\|Ga0179596_10029163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2107	Open in IMG/M
3300021170\|Ga0210400_11126811	Not Available	634	Open in IMG/M
3300021402\|Ga0210385_10026281	All Organisms → cellular organisms → Bacteria	3735	Open in IMG/M
3300021403\|Ga0210397_11024502	Not Available	641	Open in IMG/M
3300021404\|Ga0210389_10703348	Not Available	792	Open in IMG/M
3300021432\|Ga0210384_10127715	Not Available	2281	Open in IMG/M
3300021476\|Ga0187846_10354896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	604	Open in IMG/M
3300021479\|Ga0210410_10069213	Not Available	3093	Open in IMG/M
3300022523\|Ga0242663_1110552	Not Available	557	Open in IMG/M
3300022530\|Ga0242658_1091288	Not Available	716	Open in IMG/M
3300024330\|Ga0137417_1363552	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300025906\|Ga0207699_10091275	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300026075\|Ga0207708_10085268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2429	Open in IMG/M
3300026309\|Ga0209055_1056871	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300026333\|Ga0209158_1022348	Not Available	2835	Open in IMG/M
3300026369\|Ga0257152_1015653	Not Available	805	Open in IMG/M
3300026377\|Ga0257171_1101290	Not Available	512	Open in IMG/M
3300026507\|Ga0257165_1000487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3956	Open in IMG/M
3300026551\|Ga0209648_10151728	Not Available	1828	Open in IMG/M
3300026551\|Ga0209648_10165122	Not Available	1732	Open in IMG/M
3300027535\|Ga0209734_1063342	Not Available	702	Open in IMG/M
3300027591\|Ga0209733_1008098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2738	Open in IMG/M
3300027681\|Ga0208991_1065664	Not Available	1094	Open in IMG/M
3300027684\|Ga0209626_1042787	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300027812\|Ga0209656_10170732	Not Available	1074	Open in IMG/M
3300027821\|Ga0209811_10015860	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300027825\|Ga0209039_10030540	Not Available	2602	Open in IMG/M
3300027846\|Ga0209180_10702190	Not Available	550	Open in IMG/M
3300027875\|Ga0209283_10381349	Not Available	921	Open in IMG/M
3300027880\|Ga0209481_10751859	Not Available	507	Open in IMG/M
3300027882\|Ga0209590_10051948	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300028536\|Ga0137415_10109744	Not Available	2607	Open in IMG/M
3300028792\|Ga0307504_10001515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4518	Open in IMG/M
3300028857\|Ga0302289_1166211	Not Available	507	Open in IMG/M
3300028884\|Ga0307308_10603576	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300029636\|Ga0222749_10310843	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300029989\|Ga0311365_11459929	Not Available	587	Open in IMG/M
3300030730\|Ga0307482_1035723	Not Available	1137	Open in IMG/M
3300030943\|Ga0311366_10735272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300031469\|Ga0170819_11927590	Not Available	590	Open in IMG/M
3300031545\|Ga0318541_10057721	All Organisms → cellular organisms → Bacteria → Acidobacteria	2008	Open in IMG/M
3300031718\|Ga0307474_10021354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4718	Open in IMG/M
3300031719\|Ga0306917_10018773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4219	Open in IMG/M
3300031753\|Ga0307477_10022644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4292	Open in IMG/M
3300031754\|Ga0307475_10011623	All Organisms → cellular organisms → Bacteria	5880	Open in IMG/M
3300031765\|Ga0318554_10634363	Not Available	601	Open in IMG/M
3300031833\|Ga0310917_10172013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus propionicus	1439	Open in IMG/M
3300031910\|Ga0306923_10354609	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300032044\|Ga0318558_10091396	Not Available	1414	Open in IMG/M
3300032091\|Ga0318577_10313592	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300032160\|Ga0311301_10652860	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300032160\|Ga0311301_10994808	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300032180\|Ga0307471_100255418	Not Available	1808	Open in IMG/M
3300032261\|Ga0306920_102295991	Not Available	747	Open in IMG/M
3300032515\|Ga0348332_14637304	Not Available	1923	Open in IMG/M
3300032782\|Ga0335082_10107983	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300033289\|Ga0310914_10055634	All Organisms → cellular organisms → Bacteria → Acidobacteria	3279	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.84%
Aquatic	Environmental → Aquatic	15.91%
Plants	Host-Associated → Plants	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Freshwater	Environmental → Aquatic → Freshwater	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Sediment	Environmental → Aquatic → Sediment	5.68%
Marine	Environmental → Aquatic → Marine	2.84%
Peat	Environmental → Terrestrial → Peat	1.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.14%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.57%
Cave	Environmental → Terrestrial → Cave	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.55%
Loam	Environmental → Terrestrial → Soil → Loam	18.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.14%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.70%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.14%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.14%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.70%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.70%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.14%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.14%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.14%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.57%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.57%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.57%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000897	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3	Environmental	Open in IMG/M
3300001083	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1	Environmental	Open in IMG/M
3300001181	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2	Environmental	Open in IMG/M
3300001405	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012	Environmental	Open in IMG/M
3300001410	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012	Environmental	Open in IMG/M
3300001427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012	Environmental	Open in IMG/M
3300001455	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001809	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004023	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011044	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 26 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028857	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_2	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100220632	3300000793	Forest Soil	MPSADFCSAVRLPFDSLSRRGDTEQISWGKLNCLPCTVAGCTLRTLDGYGLRGNLPARPTLAPYIRFLSIDSHVCYTLPSDPASRR*
JGI12167J12862_1019312	3300000897	Forest Soil	MPRGILSRRSDTGQISWGNLSRLPRTVAESTLRIFDGYGLRGTLPARPTLAPCIRFLSIDSRVCSMLPSDTASRR*
JGI12678J13193_10004453	3300001083	Forest Soil	MPRGILSRRSDTGQISWGKLSRLPRTVAESTLRIFDGYGLRGTLPARPMLAPCIRFLSIDSRVCSMLPSDTASRR*
JGI12663J13571_1041381	3300001181	Forest Soil	MPRGILSRRSDTGQISWGKLSHLPRTVAESTLRIFDGYGLRGTLPACPMLAPHIRFLSIDSRVCSMLPSDTASRR*
JGI20186J14852_10013431	3300001405	Arctic Peat Soil	MPRGILSRRSDTEQISWGKFSRFPCTVAGSTLRILDGYGLRGKSPARPTLAPCTRFLSIDSHVCSTLPSDLASRRQPLRSR*
JGI20179J14886_10013681	3300001410	Arctic Peat Soil	DSLSRRCDTEQISWGKLSRLLCTAAESTLRTLDGYGLRGKLPARPALAPCIRFLSIDSHICYTLLSDPTSRR*
JGI20200J14955_10176893	3300001427	Arctic Peat Soil	MPRGILSRRSDTGQISWGKLSRLPRTVAESTLCIFDGYGLRGRRPARPTLAPCIRFLSIDSRVCSMLPSDT
JGI11848J15208_1000132	3300001455	Forest Soil	MPRGILSRRSDTGQTSWGKLSRLPRTVAESTLRIFDGYGLRGTLPARPMLAPCIRFLSIDSRVCSMLPSDTASRR*
JGI12635J15846_107359791	3300001593	Forest Soil	MPSADFCSAVRPPYGALSRRSDTEQISWGKFSRFPCTVAGSTLRILDGYGLRGKSPARPTLAPCTRFLSI
JGI12053J15887_102420142	3300001661	Forest Soil	MPSADFCSAIRPPHGALSRRSDTEQISWSKFSRLPYTVAGSTLRILDGYGLRGKWPARPMLAPCTRFLSIDPYVCSTLPSDLASRRQPLRRR*
JGI20220J20339_10485922	3300001809	Wetland	MPYADFCFAVNLSYGKLSRFCDTEQISRGKLSCLPRTIAGSTLRVLDGYGLCGKWAARPALTPYIRFLSIDSRICSTLPSDPASRR*
JGI12627J18819_100263791	3300001867	Forest Soil	MPDADFCSAVRSPYGHLSRRSDTEQISWGKLSHLPCTIAESTLRTSMDYGLRGKLPTRPVRAPSIRFLFIDSHV
JGIcombinedJ26739_1001910922	3300002245	Forest Soil	MPYADFCSAVRLPRDSLSRRNDTEQISRGKFNRLLRTAAGSTLRVLDGYGLRGKLPARPTLTPCIRFLSIDSRFAPRFLQTPPRDGSPCVIA
JGIcombinedJ26739_1002003691	3300002245	Forest Soil	MPLGSLSRRSDTEQISWGKLSRLPCAIAESTLRTLDGYGLRGKLPARPALAPHIRFLSIDSHVCSTLPSDLASRR*
JGIcombinedJ26739_1004140621	3300002245	Forest Soil	MPSADFCPAVRPPFGNLSRSRDAEQISWGKLNGLLCTAAGSTLRIFDGYGLRGKLPARPTLAPCIWFLSIDSHICYTLLSDPASRR*
JGI25382J43887_100646532	3300002908	Grasslands Soil	MPYADFCPAVRWPFDHLSRRSDAGQISWGKLNRIPCTVAESTLRVLDGYGLRGKLPARPALAPYIRFLFIDSHVCSMLPSDPASWR*
JGI26343J46809_10004303	3300003223	Bog Forest Soil	MPHDILSRRSDTEQISWGKXSRFPCTVAGSTLRILDGYGLRGKWPARPTLAPCTRFLSIDPHVCSTLPSDLASRRQPLRRR*
JGI20214J51088_108849982	3300003432	Wetland	MPYADFCFAVNLSYGKLSRFCDTEQISRGKLSCLPRTIAGSTLRVLDGYGLCGKWAARPALTPYIG
JGI20214J51088_110514461	3300003432	Wetland	MPYADFCSVVSLSYGRLSRFRDAGQISRGNLSRLLRAIAGSTFRMLDGYGLRDTLPARPTLTPYIRFLSIDSRICFALPLDPASRR*
JGI20214J51650_101505142	3300003541	Wetland	MPYADFCQAVSLPCGKLSRLRDAQQISRGKLSCLPRTIAGSTLCVLDGYGLRGTLAARPTLTPYIRFLSIDSRFCSTLPSDPASRR*
Ga0055432_102342962	3300004022	Natural And Restored Wetlands	MLTSAPRVSVSCGTLSRLRDTEQISRGKFSRLPRAIVGSTLRVLDGYGLRGKSAARPTLTPCIRFLSIDSRFCSALPSD
Ga0055441_100543552	3300004023	Natural And Restored Wetlands	MPSADFCPAVKLPLNSFSRQSDTEQISWGKFSCLPCTVAESTLRTLDGYGLCSTSPARPVLAPYIRFLSIDSHV*
Ga0063454_1017316001	3300004081	Soil	MPYGMLSRRSDTGQISWGKLSRLPRTVAESTLRTFDGYGLRGTLPARPVLTPCIRFLSIDSRFCSVLPSDLASRR*
Ga0063455_1016334512	3300004153	Soil	GTLSRRSDTEQISRGKFNRLLRTVAGSTLRVLDGYGLRGKLPARPTLTPCIRFLFIDSRICSTLPSDPASRR*
Ga0068972_15406192	3300004478	Peatlands Soil	MPYADSCLAVRLPPDNLSRWCDTGQVSWGKLSRLPCTIAGSTLRIFDGYGLHGKSPARPTLTPYIRFLSIDSHVCYTLPSDLVSRR*
Ga0066395_100452282	3300004633	Tropical Forest Soil	MPSADLCSAVRPPFGSLSRRSDTEQISWGKLSRLPCTVAGSTLRTLDGYGLRGKLPARPALAPDIRFLSIDSHVCSMLLSDPASRR*
Ga0066820_10056402	3300005160	Soil	MPSADFCPAVRPPHGALSRRSDTEQISWGNLSRLPCTVAGSTLRILDGYGLRGKWPARPTLAPCTRFLSIDSH
Ga0066810_100324252	3300005169	Soil	MLTSTPRSGGLSAASGRRSDTKQISRGKLSCLPCTIAESTLRAFDGYGLRSTLPARPALAPAIRFLSIDSHVCSTLPSDLA
Ga0066688_107893601	3300005178	Soil	MPYADFCPAIGPSYDNLSRRSDTKQISRGKLSCLPCTIAESTLRTLDGYGLRSKLPARPALAPNIRFLFIDRTFDPCFL
Ga0066388_1054550361	3300005332	Tropical Forest Soil	MAYLPLLLVWAFSDGSDTMPYADFCSAIRSPFGYLSRRSDTEQISWGKLSHFPCTIAESTLRILMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDPAS
Ga0070667_1009111402	3300005367	Switchgrass Rhizosphere	MPSADFCPAVRPPFDNLSRRSDAEQISWGKLNRLPCTAAGSTLRIFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTLLSDP
Ga0070709_101021383	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPYADFCSAVRSPYGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPERAPSIRFLSIDSHVCSMLPSDLASRR*
Ga0070714_1009155312	3300005435	Agricultural Soil	MPDADFCSAVRSPYGHLSRRSDTEQISWGKLSHFPCTVAESTLRTLMDYGLRGKLPTRPVRAPSIQFLSIDSHVCSMLPSDPTSQR*
Ga0070714_1015948472	3300005435	Agricultural Soil	MPDADFCSAVRLPCGSLSRNRDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDLTSRR*
Ga0070711_1000364552	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLDADFCSAVRLPYGSLSRNRDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPERAPSIRFLSIDSHVCSMLPSDLASRR*
Ga0070708_1001201671	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPDADFCSAVRSPYGHLSRRSDTEQISWGKLSHFPCTVAESTLRTLMDYGLRGKLPTRPVRAPSIQFLSID
Ga0070708_1002049502	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPDADFCSAVRSPHGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIQFLSIDSHVCSMLPSDLASRR*
Ga0070707_1001916462	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPDADFCSAVRSPYGYLSRRSDTEQISWGKLSHFPCTIAESTLPTLMDYGLRGKLPARPALAPSIRFLSIDSHVCSMLPSDLASRQ*
Ga0070707_1011949701	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPSADFGPAVRLPLASLSRRSDTGQISWGNLSRLPCTIAGSTLRTLDGYGLRGKLPARPALAPYIRFLSIDSPFAPRFLQTSPRDDSPCVI
Ga0073909_100921232	3300005526	Surface Soil	MPSADFCPAVRPPYGALSRRSDTEQISWGKLSRLPCIVAGSTLRILDGYGLRGKWPARPTPTPCTRFLSIDSHVCSTLPSDLALRQQPLRYR*
Ga0070731_101591594	3300005538	Surface Soil	SAVRPPFDSLSRRSDTEQISWGKFSRLLCTAAGSTLRTFDGYGLRGKLPARPALAPNIRFLSIDSHI*
Ga0066697_102802292	3300005540	Soil	MPYADFCPAVRRPFDHLSRRGDAEQISWGKLNRLPCTIAESTLRILDGYGLRGKLLARPALAPCIRFLFIDSHVCSMLPSDPASRR*
Ga0066701_106665701	3300005552	Soil	MPYADFCSAVRLPLSRLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDLASRR*
Ga0066692_102548492	3300005555	Soil	MPDADFCSAVRSPYGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIQFLSIDSHVCSMLPSDPASRR*
Ga0066698_102075871	3300005558	Soil	DFCSAVRLPFDSLSRPRDTEQISWGKFSRLLCTAAGSTHRTLDGYGLRGKLPARPALAPCIRFLSIDSHI*
Ga0066706_109444051	3300005598	Soil	MPYADFCSAVRPPLSRLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIQFLSIDSHVCSMLPSDPA
Ga0066903_1007171592	3300005764	Tropical Forest Soil	MPDADFCSAVRSPYGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPARAPSIRFLSIDSHVCSMLPS
Ga0066903_1035659021	3300005764	Tropical Forest Soil	MPSADFCPAVRPPFDGLSRRSDTEQISWGKFSRLPCTIVGSTLRTLDGYGLRGKSAARPMLTPCIRFLSIDS
Ga0074472_103645832	3300005833	Sediment (Intertidal)	MPSADFCPAVRPPFDSLSRRSDTEQISWGKFSRLLCTAAGSTLRTFDGYGLRGKSPAGPALAPCIRFLSIDSHI*
Ga0070766_100721823	3300005921	Soil	MPYADFCPAVRMPLGSLSRRSDTEQISWGKLSRLPCAIAESTLRTLDGYGLRGKLPARPALAPYIRFLSIDSHVCSTLPSDLASRR*
Ga0075028_1004158822	3300006050	Watersheds	MPSADFCPAVRPPFDNLSRRSDAEQISWGKLNRLPCAAAGSTLRVFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTLLSDP
Ga0075029_1005964951	3300006052	Watersheds	ADFCPAVRPPFDSLSRRSDTEQISWGKFSRLLCTAAESTLRTLDGYGLRGKLPARPALAPCIRFLSIDSHICYTLLSDPTSRR*
Ga0075026_1009492201	3300006057	Watersheds	QISWGKLSRLPRTVAESTLRTVDGYGLRGTLPARPVLAPCIRFLSIDSRICLVLPSDPALRR*
Ga0075017_1002046792	3300006059	Watersheds	MPSADFCPAVRPPFDNLSRRSDAEQISWGKLNRLPCAAAGSTLRIFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTLL
Ga0075015_1001387993	3300006102	Watersheds	MPHDILSRRSDTEQISWGKFSRFPCTVAGSTLRILDGYGLRGKWPARPTLAPCTRFLSIDPHVCSTLPSDLASRRQPLRRR*
Ga0075030_1001768173	3300006162	Watersheds	PFDSLSRRSDTEQISWGKLSRLLCTAAGSTLRTLDGYGLRGKSPARPALAPCIRFLSIDSHICYTLLSDPTSRR*
Ga0070716_1005182941	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPYADFCSVVRLPFDSLSRRSDTEQISRGKLSCLPCTIAESTLRTLDGYGLRSKLPARPVLAPNIRFLFIDSHV*
Ga0075014_1001027932	3300006174	Watersheds	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCVFDGCGLRSTLPACPTLTPHIRFLSIDSHVCSTLPSDLVC
Ga0075021_103775164	3300006354	Watersheds	SFADVMTYYAYADFCPAVRRPFDHLSRRGDAEQISWGKLNRLPCTIAESTLRVLDGYGLRGKLRARPALAPCIRFLFIDSHVCSMLPSDPASRR*
Ga0075021_111160891	3300006354	Watersheds	MPSADFCSAIRPPHGALSRRSDTEQISWSKFSRLPYTVAGSTLRILDGYGLRGKWPARPMLAPCTRFLSIDPHVCSTLPSDLASRR*
Ga0074055_112725252	3300006573	Soil	MPDADFCSAVRPPFDGLSRGRDTEQISWGKLSHFPCTIAESTLCTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDPTSQR*
Ga0066665_109275492	3300006796	Soil	MDGVPDAPWVSRSLSPLGHLSRRSDTEQISWGKLSHFPCTIAESMLRTLMDYGFRGTLPTRPVRAPSIRFLSIDSHVCSMLPSDL
Ga0066665_110559221	3300006796	Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVYRRVT
Ga0066659_108024602	3300006797	Soil	MPYADFCPAIGPSYDNLSRRSDTKQISRGKLSCLPCTIAESTLRTLDGYGLRSKLPARPALAPNIRFLFIDSHFDPCFLQT
Ga0075428_1001431492	3300006844	Populus Rhizosphere	MPYADFCPVVRLPYDNLSRRNDAEQISWGKLSRLLRTIAGSTLRVLDGYGLRSKLPARPTLAPYIRFLSIDSRLCSTLPSDLASQR*
Ga0075428_1002678772	3300006844	Populus Rhizosphere	MPYADFCSAVRLSFGSLSRRSDTKQISRGKLDCLPCTIAESTLRTLDGYGLRSKLPARPALAPNIRFLFIDSHV*
Ga0075431_1000793776	3300006847	Populus Rhizosphere	DTGQISWGKLRRLPCTVAGSTLRLFDGYGLRGKLAARPRLAPDIRFLSIDSHVCSTLPSDLASRR*
Ga0075425_1022887611	3300006854	Populus Rhizosphere	MPYADFCPAVRVPLDTLSHRGDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDL
Ga0075434_1013803812	3300006871	Populus Rhizosphere	MPDADFCSALRSPYGHLSRRCDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSD
Ga0073928_101083382	3300006893	Iron-Sulfur Acid Spring	MPDADFCSAVRSPFGGLSRPRDTEQISWGKLSCLPCTVAESTLRTLMELDFAVLPARPVLAPYIRFLSIDSHV*
Ga0073928_108402461	3300006893	Iron-Sulfur Acid Spring	MPRGILSRRSDTEQISWGKLSRFPCTVAGSTLRTLDEYGLRGKWPDRLTLAPCTRFLSIDPHVCSTLPSDL
Ga0075424_1006406772	3300006904	Populus Rhizosphere	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSPFAPRFLQTSFADE*
Ga0099793_100386822	3300007258	Vadose Zone Soil	MPYADFCSAVRLPLSRLSRRSDAEQISWGKLSHLPCTAAESTLRTLMDYGLRGTSPTRPVRAPSIRFLSIDSHVCSMLPSDLASRR*
Ga0066710_1031453111	3300009012	Grasslands Soil	MPYADLCPAVSLPYGKLSRLRGTKQISRGKFSRLLRAIAGSTLRVLDGYGLRGKSAARPTLTPCIRFLSIDSRFC
Ga0099829_105940772	3300009038	Vadose Zone Soil	MPYADFCPAVRMPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGTGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDL
Ga0099827_100141134	3300009090	Vadose Zone Soil	MPYADFCPAVRMPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGTGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSLQR*
Ga0075423_129307821	3300009162	Populus Rhizosphere	MPYADFCPVVRLPYDNLSRRNDAEQISWGKLSRLLRTIAGSTLRVLDGYGLRSKLPARPTLAPYIRFLSIDSRL
Ga0105249_100806962	3300009553	Switchgrass Rhizosphere	MPYADFCPVVRLPYDNLSRRNDAEQISWGKLSRLLRTIAGSTLRLFDGYGLRGKLPARLTLAPYIRFLSIDSRICSTLPSDLASQR*
Ga0116223_100054236	3300009839	Peatlands Soil	MPDADFCSAVRLPFGSLSRQGDTKQISWGKLSRLPCTIAESTLRTWMEMDFRGKLPARPMPAPYIRFLSINSHVCSMLPSDPTSRR*
Ga0126373_125919562	3300010048	Tropical Forest Soil	MPSADFCPAVRPPLDGLSRRSDTEQISWGKFSRLPCTIVGSTLRTLDGYGLRGKSAARPMLTPCIRFLSIDSH
Ga0134111_104649761	3300010329	Grasslands Soil	MPYADFCSAVRLPLSRLSRRSDTEQISWGKLSRLLCTAAESTLRTLDGYGLRGKLPARPALTPCIRFLSIDSHICFTLLSDPASRR
Ga0134080_106981321	3300010333	Grasslands Soil	RFLGFTRTQYADFCPAVSLPLGKLSRLRGTEQISRRKFSRLPRTIAGSTLRVLDGYGLHGKSAARPTLTPCIRFLSIDSRFCLTLPSDPASRR*
Ga0126381_1027254811	3300010376	Tropical Forest Soil	VTDYSIRFNGGPADFCLAIRLPLDFLSRSRDTRQISWGNLSRLPCTVAGSTLRVFDGYGLRSKLPARPALAPYTRFLSIDSHVCFPLLLDPAS
Ga0126383_128273101	3300010398	Tropical Forest Soil	MPYADFCSGIRLPYDTLSRHSDAEQISWGKLNRLPCTVAGSTLRTLDGYGLRSKLPARPALTPAIRFLSIDSH
Ga0138545_1017351	3300011044	Peatlands Soil	MPYADSCLAVRLPPDNLSRWCDTGQVSWGKLSRLPCTIAGSTLRIFDGYGLHGKSPARPTLTPYIRFLSIDLHVCDTLPSDLVS
Ga0137388_113451771	3300012189	Vadose Zone Soil	MPYADFCPAVRRPFDHLSRRGDAEQISWGKLSHFPCTIAESTLRVLDGYGLRGKLPARPALAPCIRFLFIDSHV
Ga0137383_103141462	3300012199	Vadose Zone Soil	MPYADFRPAVRVPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRGKSPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTS
Ga0137383_113457742	3300012199	Vadose Zone Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTS
Ga0137399_102827772	3300012203	Vadose Zone Soil	MPYADFCPAVRVPLDTLSHRGDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSTLPACPTLTPPIRFLSIDSHVCSTLPSDLVCRRVTSLQR*
Ga0137380_100397944	3300012206	Vadose Zone Soil	MPDADFCSAVRSPYGYLSRHSDTEQISWGKLSHFLCTIAESTLCTLMDYGLRGKLPTRPVRAPSIRFLFIDSHVCSMLPSDLASRR*
Ga0137380_101345501	3300012206	Vadose Zone Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVGRRVTSLQR*
Ga0137381_111808832	3300012207	Vadose Zone Soil	MPYADFYSAVRMSLDSLSRRSDTEQISWGKLSRLLCAIAESTLRTLDGYGLRGKLPARPALAPHIRFLS
Ga0137379_101601931	3300012209	Vadose Zone Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVGRRVTSLQ
Ga0137377_115883682	3300012211	Vadose Zone Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSL
Ga0137367_101920751	3300012353	Vadose Zone Soil	MPDADFCSVVRSPYGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFL
Ga0137390_107635852	3300012363	Vadose Zone Soil	MPYADFCPAVRMPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGTGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVC
Ga0137416_109534731	3300012927	Vadose Zone Soil	MPYADFCPAVRVPLDTLSHRGDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLACRRVTS
Ga0137407_113141341	3300012930	Vadose Zone Soil	MPYADFCPAVRRPFDHLSRRGDAEQISWGKLNRLPCTIAESTLRVLDGYGLRGKLPARPALAPCIRFLFIDSHVCSMLPSDPASRRYP
Ga0126369_127822691	3300012971	Tropical Forest Soil	MPYADFCTAIRTSFDNLSRRSDTAQISRGKLDGLPCTIAESTFRALDGYGLRSKLPARPARTPNIR
Ga0157374_116905321	3300013296	Miscanthus Rhizosphere	MPFADFCPAVGPPFDSLSRRSDTEQISWGKLNRLPCTAAGSTLRIFDGYGLRDKLPARPTLTPCTRFLSIDSHFCYTLLSD
Ga0137405_12042221	3300015053	Vadose Zone Soil	MPYADFCPAVRRPFDHLSRRSDAEQISWGKLNRLPCTAAESTLRVFDGYGLRGKLPARPALAPYIRRFLSIDSHVCSMLPSDSASR
Ga0137409_101019302	3300015245	Vadose Zone Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSTLPARPTLTPPIRFLSIDSHLCSTLPSDLVADE*
Ga0134073_102868671	3300015356	Grasslands Soil	MPDADFCSAVKSPYGHLSRRSDTEQISWGKLNRLPCAAAGSTLRIFDGYGLRGKLPARPTLTPCIRFLSIDSH
Ga0182035_111708432	3300016341	Soil	MPYADFCSVVRLPFDSLSRRSDTEQISRGKLGCLPCTIAESTLRTLDGYGLRDKLPARPALAPYIRYLSI
Ga0182032_103213062	3300016357	Soil	MPSADLCAAVRPPFGSLSRRSDTEQISWGKLSRLPCTVAGSTLRTLDGYGLRGKLPTRPALAPYIRYL
Ga0182032_105543342	3300016357	Soil	MPDADFCSAVRSPYGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIQFLSIDSHVCSM
Ga0182034_110007811	3300016371	Soil	MPSADFCPAVRPPLDGLSRRSDTEQISWGKFSRLPCTIVGSTLRTLDGYGLRGKSAARPMLTPCIRFLSIDSHVCST
Ga0187814_100243963	3300017932	Freshwater Sediment	MPYADFCPAVRVPLDTLSPRSDTGQLSWGKLNRLPCAIAGSTLCIFDGCGLRSTLPARPTLTPHIRFLSIDSHVCSALPSDLVCRRVTSLQR
Ga0187879_100502613	3300017946	Peatland	MPDADFCSAVRLSYDHLSRRSDTEQISWGKLSHFPCTIAKSTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDLASR
Ga0187817_106282851	3300017955	Freshwater Sediment	MPDADFCSGVRSPFDSLSRLRDAEQISWGKLSHFLCTIAESTLRTLMDCGLRGKLPARPIRAPSIRFLSIDADVCFMLPSDLASRR
Ga0187778_105153861	3300017961	Tropical Peatland	MPYADFCTAVNPSYGGLSRFRDAGQISRGNFSRLLRTIAGSTLHVLDGYGLRSTLAARPTLPPYIRFLSIDSRICSALPSDPA
Ga0187780_101203562	3300017973	Tropical Peatland	MPYADFCSAVSPSYGRLSRFRDAGQISRGNFGRLLRTIAGSTFRVLDGYGLRDTLPARPTLTPYIRFLSIDSRICFALPLDPASRR
Ga0187780_111362741	3300017973	Tropical Peatland	PTMPYADFCTAVNPSYGGLSRFRDAGQISRGNFSRLLRTIAGSTLHVLDGYGLRSTLAARPTLPPYIRFLSIDSRICSALPSDPASRQ
Ga0187874_100500261	3300018019	Peatland	MPYADFRPAVRVPLDALSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSKSPARPTLTPPIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0187885_100817761	3300018025	Peatland	MPDADFCSAVRLSYDHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDLASR
Ga0187869_103178281	3300018030	Peatland	MPYADFCPAVRVPLDTLSHRGDTGQLSWGKLSRLPCTIAGSTLCIFDGCGLRSKSPARPTLTPPIRFLSIDSHVCSTLPSDL
Ga0187862_101120741	3300018040	Peatland	MPYADFCPAVRVPLDTLSHRGDTGQLSWGKLSRLPCTIAGSTLCIFDGCGLRSKSPARPTLTPPIRFLSIDSHVCSMLPSDPASQR
Ga0193729_10432971	3300019887	Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCAIAGSTLCIFDGCGLRSTLPARPTLTPPIRFLSIDSHVCST
Ga0193751_100031044	3300019888	Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSTLPARPTLTPPIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0179596_100291632	3300021086	Vadose Zone Soil	MPYADFCPAVRMPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGTGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0210400_111268111	3300021170	Soil	MPYADFCPAVRMPLDTLSRQSDTGQLSWGKLNRFPCTIAKSTLCIFDGCGLRSTLPARPTLTPHIRFLSI
Ga0210385_100262811	3300021402	Soil	MPRGSLSRRGDTEQISRGKFNRLLRAVAGSTLRVLDGYGLRGKLPARPTLTPCIRFLSIDSRICSTLPSDPASRR
Ga0210397_110245022	3300021403	Soil	MPYADFYSVVRMPLGSLSRRNDTEQISWGKLSRLSCTIAESTLRTFDGYGLRGKLPARPVLAPYIRFLSIDSHVCST
Ga0210389_107033481	3300021404	Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDVSGLRSKSPARPTLTPHIWFLSIDSHVC
Ga0210384_101277152	3300021432	Soil	MPYADFCPAVRMPLDTLSRQSDTGQLSWGKLNRFPCTIAKSTLCIFDGCGLRSTLPARPTLTPHIRFLSIDLHVCSTLPSDLVCRRETSLQR
Ga0187846_103548961	3300021476	Biofilm	MPYADFYSAVRLPLGRLSRRSDTEQISWGKLSRLPCTIAESTLRTLDGYGLCGKLPARPALAPYIRFLSIDSHVCSLQTS
Ga0210410_100692131	3300021479	Soil	MPYADFCPAVRMPLGSLSRRSDTEQISWGKLSRLPCAIAESTLRTLDGYGLRGKLPARPALAPHIRFLSIDSHVCSTLPSDLASRR
Ga0242663_11105521	3300022523	Soil	MPYADFCPAVRRPFGHLSRRGDAEQISWGKLNRIPCTIAESTLRVLDGYGLRGKLPPRPALAPCIRFLFIDSHVCSMLPSDPAS
Ga0242658_10912881	3300022530	Soil	MPFADFCPAVRMPLGSLSRRSDDTEQISWGKLSRLPCTVAESTLRTLDGYGLRGKLPARPALAPYIRFLSIDSHVCST
Ga0137417_13635522	3300024330	Vadose Zone Soil	MPYADFCSAVRLPLSRLSRRSDAEQISWGKLSHLPCTAAESTLRTLMDYGLRGTSPTRPVRAPSIRFLSIDSHVCSMLPSDLASRR
Ga0207699_100912752	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MLDADFCSAVRLPYGSLSRNRDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPERAPSIRFLSIDSHVCSMLPSDLASRR
Ga0207708_100852683	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DFCAAIRTSYDNLSRRSDTEQISRGKLDCLPCTIAESTLRTLDGYGLRSKLPARPALAPNIRFLFIDSHV
Ga0209055_10568712	3300026309	Soil	MPYADFCPAVRVPLDPLSHRNDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0209158_10223482	3300026333	Soil	MPYADFCSAVRLPLSRLSRRSDAEQISWGKLSHLPCAAAESTLRTLMDYGLRGTLPSRPVRAPSIRFLSIDSHVCLMLPSDPASRQ
Ga0257152_10156532	3300026369	Soil	MPYADFCSAVRLPLSRLSRRSDAEQISWGKLSHLPCTAAESTLRTLMDYGLRGTLPSRPVRAPSIRFLSIDSHVCLMLPSDPTSRQ
Ga0257171_11012901	3300026377	Soil	MPYADFCPGVRLPYDTLSRHSDAEQISWGKLNRLPCAAAGSTLRIFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTLLSDPTSRR
Ga0257165_10004873	3300026507	Soil	MPHADFCSALRSPYGHLSRRSDTGQISWGKLSHFPCTIAESTLRTLMDYGLRGTLPSRPVRAPSIRFLSIDSHVCLMLPSDPASRQ
Ga0209648_101517281	3300026551	Grasslands Soil	MPYADFCPAVRVPLDTLSHRSDAGQLSWGKLNRLPCTIAGSTLCVFDGCGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSL
Ga0209648_101651222	3300026551	Grasslands Soil	MPYADFCPAVRMPLDILSHRSNTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSL
Ga0209734_10633421	3300027535	Forest Soil	MPSADFCPAVRPPFDNLSRRSDAEQISWGKLNRLPCAAAGSTLRIFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTLLSDP
Ga0209733_10080983	3300027591	Forest Soil	RSDTEQISWGKLSRLLCTVAESTLRTFDGYGLRGKLPARPALAPTIRFLSIDSHICSTLLSDPTSRR
Ga0208991_10656641	3300027681	Forest Soil	MPSADFCPAVRLPFDSVSRRSDAEQISWGKLNRLPCAAAGSTLRIFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTLLSDPTSRR
Ga0209626_10427872	3300027684	Forest Soil	MPYADFYSVVRMPLGSLSRRNDTEQISWGKLSRLSCTIAESTLRTFDGYGLRGKLPARPVLAPYIRFLSIDSHVCSTLPSDLASRR
Ga0209656_101707322	3300027812	Bog Forest Soil	MPYADFCPAVRMPLDTLSHRRDTGQLSWGKLNRLPCTIAGSTLCILDGGGLRSTSPARPTLTPPIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0209811_100158601	3300027821	Surface Soil	GDTEQISWGKLSRLLCTAAGSTLRIFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTLLSDPTSRR
Ga0209039_100305402	3300027825	Bog Forest Soil	MPYADFCPAVRMPLDTLSHRRDTGQLSWGKLNRFPCTIAGSTLCIFDGRGLRSTLPARPTLTPPIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0209180_107021901	3300027846	Vadose Zone Soil	MLTSAPPVSLPLGTLSCLRNTKQISRGKFSRLPRTIAGSTLSVLDGYGLRGKSAVRPTLTPCIRFLSIDSRFC
Ga0209283_103813492	3300027875	Vadose Zone Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVYRRVTSLQR
Ga0209481_107518592	3300027880	Populus Rhizosphere	MPYADFCPVVRLPYDNLSRRNDAEQISWGKLSRLLRTIAGSTLRVLDGYGLRSKLPARPTLAPYIRFLSIDSRLCSTLPSDLASQ
Ga0209590_100519482	3300027882	Vadose Zone Soil	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSTLPARPTLTPHIRFLSIDSHVCSTLPSDLVCTRVTSLQR
Ga0137415_101097442	3300028536	Vadose Zone Soil	MPDADFCSAVRSPYGYLSRRSDTEQISWGKLSHFLCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLFIDSHVCSMLPSDLASRR
Ga0307504_100015153	3300028792	Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLNRFPCAIAGSTLCIFDGCGLRSTLPARPTLTPPIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0302289_11662111	3300028857	Fen	MSYADFCSAVSLSYGRLSRFCDTEQISRGNFSRLLRTIAGSTLRVLDGYGLRGTLPARPTLTPYIRFLSIDSRVCSALPLDPALRR
Ga0307308_106035761	3300028884	Soil	MPYADFCPAVRRPFDHLSRRSDAEQISWGKLNRLPCTAAESTLRVFDGYGLRSKLPARPALAPYIRFLSIDSHVCSMLPS
Ga0222749_103108431	3300029636	Soil	MPYADFCPAVRMPLDTLRRQSDTGQLSWGKLNRFPCTIAKSTLCIFDGCGLRSTLPARPTLTPYIRFLF
Ga0311365_114599291	3300029989	Fen	MPSADFCPAVRRPFDNLSRRSDAEQISWGKLNRLPCTAAGSTLRIFDGYGLRGKLPARPTLTPCTRFLSIDSHFCYTL
Ga0307482_10357232	3300030730	Hardwood Forest Soil	MPYADFCSAVRLPLSRLSRRSDAEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDLASRR
Ga0311366_107352722	3300030943	Fen	MSYADFCSAVSLSYGRLSRFCDTEQISRGNFSRLLRTIAGSTLRVLDGYGLRGTLPARPTLTPYIRFLSIDSRICSALPSDPASRR
Ga0170819_119275902	3300031469	Forest Soil	MPDADFCSAVRSPYGHLSRRSDTEQISWGKLSRLLCTAAESTLRTLDGYGLRGKLPARPALAPDIRFLSIDSHICYTLL
Ga0318541_100577212	3300031545	Soil	MTGYSIRFTGGPADFCLAVRLPLDFLSRSRDTRQISWGNLSRLPCTVAESTLRGLDGYGLRSTLPARPALAPYTRFLFIDSHVCFPLLLDPASWQ
Ga0307474_100213542	3300031718	Hardwood Forest Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLDRLPCIIAGSTLCVFDGCGLRSTSLARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0306917_100187733	3300031719	Soil	MPDADFCSEIRSPYGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDLASRR
Ga0307477_100226445	3300031753	Hardwood Forest Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLDRLPCIIAGSTLCVFDGCGLRSKSPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0307475_100116232	3300031754	Hardwood Forest Soil	MPYADFCSAVRLPLSRLSRRSDAEQISWGKLSHFPCTIAESTLRTLMDYGLRGKSPARPVRAPSIRFLSIDSHVCLMLPSDPASRQ
Ga0318554_106343631	3300031765	Soil	VTGYSIRFTGGPADFCLAVRLPLDFLSRSRDTRQISWGNLSRLPCTVAESTLRGLDGYGLRSKLPARPALAPYTRFLSIDSHVCFPLLLDPASWQ
Ga0310917_101720131	3300031833	Soil	MPPADFCPAVRPPFGNLSRRSDTEQISWGKLSRLLCTVAESTLRTLDGYELRGKLPARPALAPNIRF
Ga0306923_103546092	3300031910	Soil	MLDADFCSAVRSPYGHLSRRGDTEQISWGKLSHFPCTIAKSTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVC
Ga0318558_100913962	3300032044	Soil	MPSADFCPAVRPPLDGLSRRSDTEQISWGKFSRLPCTIVGSTLRTLDGYGLRGKSAARPMLTPYIRFLSIDSHVC
Ga0318577_103135922	3300032091	Soil	MPSADLCSAVRPPFSSLSRRSDTEQISWGKLSRLPCTVAGSTLRTLDGYGLRGKLPARPALAPYIRFLSI
Ga0311301_106528602	3300032160	Peatlands Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGSGLRSKSPARPTLTPHIRFLSIDSHVCSTLPSDLVCRRVTSLQR
Ga0311301_109948083	3300032160	Peatlands Soil	MPYADFCPAVRVPLGSLSHRSDTEQISWGKLSRLPCAIAESTLRTLDGYGLRGKLPARPVLAPHIRFLSIDSHVCSTLPSDL
Ga0307471_1002554182	3300032180	Hardwood Forest Soil	MPYADFCPAVRVPLDTLSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSKSPARPTLTPHIRFLSIDSHVCYTLPSDLVCRRVTSLQR
Ga0306920_1022959911	3300032261	Soil	MPSADFCPAVRPPLDGLSRRSDTEQISWGKFSRLPCTIVGSTLRTLDGYGLRGKSAARPMLTPCIRFLSIDSLVCSTL
Ga0348332_146373042	3300032515	Plant Litter	MPYADFCPAVRMPLDILSHRSDTGQLSWGKLNRLPCTIAGSTLCIFDGCGLRSTLPARPTLTPSIRFLSIDSHVCSTLPSDLVADE
Ga0335082_101079832	3300032782	Soil	MPDADFCSAVKLPYGHLSRRSDTEQISWGKLSYFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSDLASRQ
Ga0310914_100556341	3300033289	Soil	MPDADFCSEIRSPYGHLSRRSDTEQISWGKLSHFPCTIAESTLRTLMDYGLRGKLPTRPVRAPSIRFLSIDSHVCSMLPSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033929

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences